Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTGATTCATCAACGGAGCTGTGTTCAAGCCCTCTGAGAGACGAAGAAGGTGAAGACGCGACAAGAACTTTGCCGTTCTTCTTAAAACTGCCGGAATCTTTGAGCCGCGACAGGCACAGCCGAGATGTTTTGCTCCCTGGCCTCATCGCTTTGGGGCCTCACAATGCCAACAACCGAATAGAGTCCTACAGACTTCCTCGTATAGCGAATGGGGTTCGAAGGCAGCTTGATCTTCCTGAATACGACCAACTCTGCTCCCAATTCAGCACATTAAAGCTCAGAATCCAAGCCTGTTACGGCACCGGCTTCGAAATCGATAGCGTAAACTCGGATAGGATTATGCTCGTGGATACCTTGTTCCTCCTTGGATTGCTTCTCCACATCTCAGCTCCGGTGGAAAACTCTGTATCGATTGAGCTTCCTTCTGACGCTTCATTTCAATGGCTCGACTTGAATCGCGAGATGTTGGTGAAGGATGTTGTGAAGATTGATAATCAAATCCCACTTCTCGTTGTCCAATGGATTTTAGCCCAATCTCTTACCACAGAGGTCGAGCTACCTCTTCTTCTTCACCACTTCTGTCAAACAATTTCCCCATTTGCTCTCGTCTCTCGTAACTCGATTTATGATATTCATGGAATTAAGGATGAATCTCATCATTTGTTGCATTTCATGTACTTGTCCATCTTAATCTTACCGGGCAGATTCCGCGTAATGTTTGTCTCCGACCCCGGAGAATATGAAGATCATGAGTATCCCCTGACCCTCACCTTTTTCCAAAACTGGTTTAGTAGATTGGAATTTGTTATTGGCTTCATCCTCGATGCCAGGGAACTTATGGGCTTGATCCAAACTCTACTACAACTTATGGGGATGCTTCAAAATCATTACTTTGCTCACAGAACCACATCCTCTAATGTCATCCCCTCTGCTTCCCAGCTTCATAAACTTGCTGTCAACTTCCAGCCTATTGATGACGGAATTCTAGGCGTTCGATTCACTTCGCACTTCGCTCCTCGGCAAGACCATTTTGATCCTCGTGAATTAACTGAGAATCAAATGCCACCTGAATTCATTCTACCTGTCATGAACATCAATGCTTTTACAGAAACAGTGCTTGAAAATCTGTTAGTATTGGAGGCAATGGCTAACATAAACCCACCTGTGTATTCCCTTTATGTAGACTTGATGAAGGCCTTGATACGCACTCCAGAAGACGTACAAATTCTCAAAGAAAAGGGAATCATCATGACAAGCCATTTTGGCAACGATGATGAACAAGTTGTGAAGCTCTTCGACGGACTTGGGAGTTCCATTTCTAACCTCAAGAATCCCGATCTCGAACCAATTACCACATTTGATTTTCAAAGGATCAACGAGTTTGAGGAAGTGTACGAGGGAATGGTTGAGGAGATCAACCAATACTATGACTGCTTCTGGAAAGTTAAGGCAACAAAAGTTTTTAAAATGCTTGTGAATGTCGTGAAAATGTTGGCCATTCCTTTTACCTTCCTCCAAATTTTAAAGCTGGTCAAGGAGATGGTTATCAAATTTATTGGAGATGATGAACCCAACTACGGTCATCTACCGCCAACCTAG
mRNA sequence
ATGGCAAGTGATTCATCAACGGAGCTGTGTTCAAGCCCTCTGAGAGACGAAGAAGGTGAAGACGCGACAAGAACTTTGCCGTTCTTCTTAAAACTGCCGGAATCTTTGAGCCGCGACAGGCACAGCCGAGATGTTTTGCTCCCTGGCCTCATCGCTTTGGGGCCTCACAATGCCAACAACCGAATAGAGTCCTACAGACTTCCTCGTATAGCGAATGGGGTTCGAAGGCAGCTTGATCTTCCTGAATACGACCAACTCTGCTCCCAATTCAGCACATTAAAGCTCAGAATCCAAGCCTGTTACGGCACCGGCTTCGAAATCGATAGCGTAAACTCGGATAGGATTATGCTCGTGGATACCTTGTTCCTCCTTGGATTGCTTCTCCACATCTCAGCTCCGGTGGAAAACTCTGTATCGATTGAGCTTCCTTCTGACGCTTCATTTCAATGGCTCGACTTGAATCGCGAGATGTTGGTGAAGGATGTTGTGAAGATTGATAATCAAATCCCACTTCTCGTTGTCCAATGGATTTTAGCCCAATCTCTTACCACAGAGGTCGAGCTACCTCTTCTTCTTCACCACTTCTGTCAAACAATTTCCCCATTTGCTCTCGTCTCTCGTAACTCGATTTATGATATTCATGGAATTAAGGATGAATCTCATCATTTGTTGCATTTCATGTACTTGTCCATCTTAATCTTACCGGGCAGATTCCGCGTAATGTTTGTCTCCGACCCCGGAGAATATGAAGATCATGAGATCAACGAGTTTGAGGAAGTGTACGAGGGAATGGTTGAGGAGATCAACCAATACTATGACTGCTTCTGGAAAGTTAAGGCAACAAAAGTTTTTAAAATGCTTGTGAATGTCGTGAAAATGTTGGCCATTCCTTTTACCTTCCTCCAAATTTTAAAGCTGGTCAAGGAGATGGTTATCAAATTTATTGGAGATGATGAACCCAACTACGGTCATCTACCGCCAACCTAG
Coding sequence (CDS)
ATGGCAAGTGATTCATCAACGGAGCTGTGTTCAAGCCCTCTGAGAGACGAAGAAGGTGAAGACGCGACAAGAACTTTGCCGTTCTTCTTAAAACTGCCGGAATCTTTGAGCCGCGACAGGCACAGCCGAGATGTTTTGCTCCCTGGCCTCATCGCTTTGGGGCCTCACAATGCCAACAACCGAATAGAGTCCTACAGACTTCCTCGTATAGCGAATGGGGTTCGAAGGCAGCTTGATCTTCCTGAATACGACCAACTCTGCTCCCAATTCAGCACATTAAAGCTCAGAATCCAAGCCTGTTACGGCACCGGCTTCGAAATCGATAGCGTAAACTCGGATAGGATTATGCTCGTGGATACCTTGTTCCTCCTTGGATTGCTTCTCCACATCTCAGCTCCGGTGGAAAACTCTGTATCGATTGAGCTTCCTTCTGACGCTTCATTTCAATGGCTCGACTTGAATCGCGAGATGTTGGTGAAGGATGTTGTGAAGATTGATAATCAAATCCCACTTCTCGTTGTCCAATGGATTTTAGCCCAATCTCTTACCACAGAGGTCGAGCTACCTCTTCTTCTTCACCACTTCTGTCAAACAATTTCCCCATTTGCTCTCGTCTCTCGTAACTCGATTTATGATATTCATGGAATTAAGGATGAATCTCATCATTTGTTGCATTTCATGTACTTGTCCATCTTAATCTTACCGGGCAGATTCCGCGTAATGTTTGTCTCCGACCCCGGAGAATATGAAGATCATGAGATCAACGAGTTTGAGGAAGTGTACGAGGGAATGGTTGAGGAGATCAACCAATACTATGACTGCTTCTGGAAAGTTAAGGCAACAAAAGTTTTTAAAATGCTTGTGAATGTCGTGAAAATGTTGGCCATTCCTTTTACCTTCCTCCAAATTTTAAAGCTGGTCAAGGAGATGGTTATCAAATTTATTGGAGATGATGAACCCAACTACGGTCATCTACCGCCAACCTAG
Protein sequence
MASDSSTELCSSPLRDEEGEDATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGPHNANNRIESYRLPRIANGVRRQLDLPEYDQLCSQFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVSIELPSDASFQWLDLNREMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLLHHFCQTISPFALVSRNSIYDIHGIKDESHHLLHFMYLSILILPGRFRVMFVSDPGEYEDHEINEFEEVYEGMVEEINQYYDCFWKVKATKVFKMLVNVVKMLAIPFTFLQILKLVKEMVIKFIGDDEPNYGHLPPT
Homology
BLAST of Sed0005584 vs. NCBI nr
Match:
XP_022156841.1 (putative UPF0481 protein At3g02645 [Momordica charantia])
HSP 1 Score: 105.9 bits (263), Expect = 6.7e-19
Identity = 81/223 (36.32%), Postives = 123/223 (55.16%), Query Frame = 0
Query: 31 KLPESLSRDRHSRDVLLPGLIALGPHNANN----RIESYRLPRIANGVRRQLDLPEYDQL 90
++P+ + D + P +ALGP++ ++E Y+L + A V+ Q+ LPE+ QL
Sbjct: 49 QVPDCIKND--IPEAFTPRRVALGPYHHFQPELLKLELYKLDK-ATKVKDQIQLPEFHQL 108
Query: 91 CS-QFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVE---NSVSIEL 150
S + L+L+I+AC+ E+ IML+D LFL+ LLHI A V+ +S EL
Sbjct: 109 VSDKIKPLELKIRACFDKYLEVGCEALAWIMLIDGLFLIH-LLHIFAEVKVDCDSKRHEL 168
Query: 151 P---SDASFQWLDLN-------REMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLL 210
P DA Q + LN R +V D + ++NQIP V++ ILA + +LPL L
Sbjct: 169 PLPELDAEHQKMYLNPKANSVARNEIVSDTLMLENQIPFCVLKEILAGTQIAN-DLPLFL 228
Query: 211 HHFCQTISPFAL---VSRNSIYDIHGIKDESHHLLHFMYLSIL 233
+ FC +SPFAL +S + D+ +SHHLLHF+YL +L
Sbjct: 229 YKFCVLVSPFALPSQISPRTFLDLPQAFQQSHHLLHFLYLLVL 266
BLAST of Sed0005584 vs. NCBI nr
Match:
XP_022156849.1 (putative UPF0481 protein At3g02645 [Momordica charantia])
HSP 1 Score: 105.9 bits (263), Expect = 6.7e-19
Identity = 84/223 (37.67%), Postives = 121/223 (54.26%), Query Frame = 0
Query: 31 KLPESLSRDRHSRDVLLPGLIALGP----HNANNRIESYRLPRIANGVRRQLDLPEYDQL 90
++P+S+ D S + P +ALGP H +E Y+L R A V+ Q+ L E+ QL
Sbjct: 49 QVPDSIRND--SPEAFTPRSVALGPFHHFHPQLLNLELYKLGR-AKKVKDQIQLAEFHQL 108
Query: 91 CS-QFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVSI---EL 150
S + L+L+I+AC+ E+ IML+D LFL+ LL I A VE S+ EL
Sbjct: 109 ISDKLKPLELKIRACFKKYLEVGCEALAWIMLIDGLFLIH-LLQIFAEVEVKCSLQRHEL 168
Query: 151 P---SDASFQWLDLN-------REMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLL 210
P DA Q + LN R +V D + ++NQIP V++ ILA + +LPLLL
Sbjct: 169 PLPELDAEHQQMYLNPKANSMARNEIVSDTLMLENQIPFCVLKEILAGTQIVN-DLPLLL 228
Query: 211 HHFCQTISPFAL---VSRNSIYDIHGIKDESHHLLHFMYLSIL 233
+ FC +SPF L ++ + D+ +SHHLLHF+YL IL
Sbjct: 229 YKFCVLVSPFGLPSQINSRTFLDLPQTFQKSHHLLHFLYLLIL 266
BLAST of Sed0005584 vs. NCBI nr
Match:
XP_022156845.1 (putative UPF0481 protein At3g02645 [Momordica charantia])
HSP 1 Score: 100.9 bits (250), Expect = 2.1e-17
Identity = 79/246 (32.11%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 14 LRDEEGEDATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGPHNANN----RIESYRLPR 73
L+ + A T ++P+ + D S + P I+LGP++ ++E Y+L
Sbjct: 11 LQRNDFHTAFETPTSIFQVPDCIRND--SPEAFTPRRISLGPYHHFRPELLKLELYKL-L 70
Query: 74 IANGVRRQLDLPEYDQLCSQ-FSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLL 133
+A V+ Q+ LPE+ QL S L+L+I+AC+ E+ + +ML+D LFL+ LL
Sbjct: 71 VAKKVKHQIQLPEFHQLVSDTLKPLELQIRACFDKYLEVGCESLSWMMLIDALFLI-RLL 130
Query: 134 HISAPVENSVSIELPSDASFQWLD--------------LNREMLVKDVVKIDNQIPLLVV 193
HI A VE V +L S S+ LD + R+ ++ D + ++NQIP V+
Sbjct: 131 HIFAEVE--VKRDLNSKLSWPELDVEHQQLYLNHEASSMGRDEIICDALMVENQIPFRVL 190
Query: 194 QWILAQSLTTEVELPLLLHHFCQTISPFALVSRNSIYDIHGIK--------DESHHLLHF 233
+ IL + +LP+ L+ FC +SPF L S S++ G + ++SHHLL F
Sbjct: 191 KGILVGNEIIN-DLPVQLYKFCVLVSPFGLPSHRSLFFNRGSRFPNLPQTFEQSHHLLQF 249
BLAST of Sed0005584 vs. NCBI nr
Match:
XP_022156851.1 (putative UPF0481 protein At3g02645 [Momordica charantia])
HSP 1 Score: 99.4 bits (246), Expect = 6.2e-17
Identity = 81/230 (35.22%), Postives = 124/230 (53.91%), Query Frame = 0
Query: 31 KLPESLSRDRHSRDVLLPGLIALGPHNANN----RIESYRLPRIANGVRRQLDLPEYDQL 90
++P+S+ D S + P +ALGP++ +E Y+L R A V+ Q++L E+ +L
Sbjct: 49 QVPDSIRND--SPEAFTPRRVALGPYHHFRSELLNLELYKLSR-AKKVKDQIELAEFHKL 108
Query: 91 CS-QFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVSI---EL 150
S + L+L+I+AC+ E+ IML+D LFL+ L I A VE S+ EL
Sbjct: 109 VSDKLKPLELKIRACFDKYLEVGCEALAWIMLIDGLFLIH-SLRIFAEVEVECSLQRHEL 168
Query: 151 P---SDASFQWLDLN-------REMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLL 210
P D+ Q + LN R +V D + ++NQIP V++ ILA + +LP+LL
Sbjct: 169 PLPELDSEHQQMYLNPKANSMARNEIVSDTLMLENQIPFCVLKEILAGTHIIN-DLPVLL 228
Query: 211 HHFCQTISPFALVSRNSIYDIHGIK----------DESHHLLHFMYLSIL 233
+ FC +SPFAL S + + ++ I +SHHLLHF+YL IL
Sbjct: 229 YKFCVLVSPFALRSYSHMVLVNSISFLDDRLPQTFQQSHHLLHFLYLLIL 273
BLAST of Sed0005584 vs. NCBI nr
Match:
XP_022973420.1 (putative UPF0481 protein At3g02645 [Cucurbita maxima])
HSP 1 Score: 97.4 bits (241), Expect = 2.4e-16
Identity = 78/223 (34.98%), Postives = 115/223 (51.57%), Query Frame = 0
Query: 22 ATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGPHNANNRIESYRLPRIANGVRRQLD-L 81
A+ T +LPES+ RD LP IALGP++ + R E Y++ G + L
Sbjct: 29 ASHTPISVFQLPESV-RDGDPA-AYLPQFIALGPYH-HFRSELYKMDLFKLGKAKNLKWR 88
Query: 82 PEYDQLCSQFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVS- 141
P+ +L Q L+L+I+ C+ EID ++L+D LFL+ LL +N S
Sbjct: 89 PQLHELADQLKPLELQIRGCFCGSLEIDGETLSWVVLIDGLFLIDLL-------QNEFSN 148
Query: 142 --IELPSDASFQWLDLNREMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLLHHFCQ 201
++LP + + L E +V D+VK++NQIPLLV+Q I L L + F
Sbjct: 149 RPLKLPLEIFYGKLWSEFE-IVSDMVKLENQIPLLVLQEICPDEPFN--YLAPLFYQFSA 208
Query: 202 TISPFALVSRNSIYDIHGIKDESHHLLHFMYLSILILPGRFRV 241
++SPF LV ++ I D SHHLLHF+Y IL++P V
Sbjct: 209 SVSPFELVCFGFASNLPEIFDSSHHLLHFVYFLILLIPDEMAV 238
BLAST of Sed0005584 vs. ExPASy Swiss-Prot
Match:
P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)
HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 49/198 (24.75%), Postives = 94/198 (47.47%), Query Frame = 0
Query: 44 DVLLPGLIALGPHNA----NNRIESYRLPRIANGVRRQLDLPEYDQLCSQFSTLKLRIQA 103
D P +++GP++ + +E Y+L IA +R Q + + L + +++++I+A
Sbjct: 58 DSYTPHRVSIGPYHCLKPELHEMERYKL-MIARKIRNQYNSFRFHDLVEKLQSMEIKIRA 117
Query: 104 CYGTGFEIDSVNSDRIMLVDTLFLLGLL-LHISAPVENSVSIELPSDASFQWLDLNREML 163
CY + IM VD+ FL+ L ++ VE ++ + +
Sbjct: 118 CYHKYIGFNGETLLWIMAVDSSFLIEFLKIYSFRKVETLIN------------RVGHNEI 177
Query: 164 VKDVVKIDNQIPLLVVQWILAQSL-TTEVELPLLLH---HFCQTISPFALVSRNSIYDIH 223
++D++ I+NQIPL V++ L L +TE LLL C+ +SP ++ + +
Sbjct: 178 LRDIMMIENQIPLFVLRKTLEFQLESTESADDLLLSVLTGLCKDLSPL-VIKFDDDQILK 237
Query: 224 GIKDESHHLLHFMYLSIL 233
E +H+L F+Y I+
Sbjct: 238 AQFQECNHILDFLYQMIV 241
BLAST of Sed0005584 vs. ExPASy TrEMBL
Match:
A0A6J1DW70 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023674 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 3.2e-19
Identity = 81/223 (36.32%), Postives = 123/223 (55.16%), Query Frame = 0
Query: 31 KLPESLSRDRHSRDVLLPGLIALGPHNANN----RIESYRLPRIANGVRRQLDLPEYDQL 90
++P+ + D + P +ALGP++ ++E Y+L + A V+ Q+ LPE+ QL
Sbjct: 49 QVPDCIKND--IPEAFTPRRVALGPYHHFQPELLKLELYKLDK-ATKVKDQIQLPEFHQL 108
Query: 91 CS-QFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVE---NSVSIEL 150
S + L+L+I+AC+ E+ IML+D LFL+ LLHI A V+ +S EL
Sbjct: 109 VSDKIKPLELKIRACFDKYLEVGCEALAWIMLIDGLFLIH-LLHIFAEVKVDCDSKRHEL 168
Query: 151 P---SDASFQWLDLN-------REMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLL 210
P DA Q + LN R +V D + ++NQIP V++ ILA + +LPL L
Sbjct: 169 PLPELDAEHQKMYLNPKANSVARNEIVSDTLMLENQIPFCVLKEILAGTQIAN-DLPLFL 228
Query: 211 HHFCQTISPFAL---VSRNSIYDIHGIKDESHHLLHFMYLSIL 233
+ FC +SPFAL +S + D+ +SHHLLHF+YL +L
Sbjct: 229 YKFCVLVSPFALPSQISPRTFLDLPQAFQQSHHLLHFLYLLVL 266
BLAST of Sed0005584 vs. ExPASy TrEMBL
Match:
A0A6J1DUT7 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023686 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 3.2e-19
Identity = 84/223 (37.67%), Postives = 121/223 (54.26%), Query Frame = 0
Query: 31 KLPESLSRDRHSRDVLLPGLIALGP----HNANNRIESYRLPRIANGVRRQLDLPEYDQL 90
++P+S+ D S + P +ALGP H +E Y+L R A V+ Q+ L E+ QL
Sbjct: 49 QVPDSIRND--SPEAFTPRSVALGPFHHFHPQLLNLELYKLGR-AKKVKDQIQLAEFHQL 108
Query: 91 CS-QFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVSI---EL 150
S + L+L+I+AC+ E+ IML+D LFL+ LL I A VE S+ EL
Sbjct: 109 ISDKLKPLELKIRACFKKYLEVGCEALAWIMLIDGLFLIH-LLQIFAEVEVKCSLQRHEL 168
Query: 151 P---SDASFQWLDLN-------REMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLL 210
P DA Q + LN R +V D + ++NQIP V++ ILA + +LPLLL
Sbjct: 169 PLPELDAEHQQMYLNPKANSMARNEIVSDTLMLENQIPFCVLKEILAGTQIVN-DLPLLL 228
Query: 211 HHFCQTISPFAL---VSRNSIYDIHGIKDESHHLLHFMYLSIL 233
+ FC +SPF L ++ + D+ +SHHLLHF+YL IL
Sbjct: 229 YKFCVLVSPFGLPSQINSRTFLDLPQTFQKSHHLLHFLYLLIL 266
BLAST of Sed0005584 vs. ExPASy TrEMBL
Match:
A0A6J1IBB2 (putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111471968 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 1.1e-16
Identity = 78/223 (34.98%), Postives = 115/223 (51.57%), Query Frame = 0
Query: 22 ATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGPHNANNRIESYRLPRIANGVRRQLD-L 81
A+ T +LPES+ RD LP IALGP++ + R E Y++ G + L
Sbjct: 29 ASHTPISVFQLPESV-RDGDPA-AYLPQFIALGPYH-HFRSELYKMDLFKLGKAKNLKWR 88
Query: 82 PEYDQLCSQFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVENSVS- 141
P+ +L Q L+L+I+ C+ EID ++L+D LFL+ LL +N S
Sbjct: 89 PQLHELADQLKPLELQIRGCFCGSLEIDGETLSWVVLIDGLFLIDLL-------QNEFSN 148
Query: 142 --IELPSDASFQWLDLNREMLVKDVVKIDNQIPLLVVQWILAQSLTTEVELPLLLHHFCQ 201
++LP + + L E +V D+VK++NQIPLLV+Q I L L + F
Sbjct: 149 RPLKLPLEIFYGKLWSEFE-IVSDMVKLENQIPLLVLQEICPDEPFN--YLAPLFYQFSA 208
Query: 202 TISPFALVSRNSIYDIHGIKDESHHLLHFMYLSILILPGRFRV 241
++SPF LV ++ I D SHHLLHF+Y IL++P V
Sbjct: 209 SVSPFELVCFGFASNLPEIFDSSHHLLHFVYFLILLIPDEMAV 238
BLAST of Sed0005584 vs. ExPASy TrEMBL
Match:
A0A5A7T6Y5 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00320 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 9.7e-16
Identity = 73/245 (29.80%), Postives = 117/245 (47.76%), Query Frame = 0
Query: 20 EDATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGP-HNANNRIESYRLPRIANGVR--R 79
+ A +T KLP S++ ++ + P IA GP H+ N + L ++ N +
Sbjct: 32 QTALQTPTSIFKLPHSIT--NNNPQLYFPRYIAFGPYHHFRNDLYQMELHKLHNAINSTH 91
Query: 80 QLDLPEYDQLCSQFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVEN 139
LP+ +Q+ Q L ++I++C+ EI S IML+D LFL+ LL P+ N
Sbjct: 92 SFQLPQLNQIVQQLKQLDIKIRSCFDNFLEIGSEALAWIMLIDGLFLIQLL-----PISN 151
Query: 140 SVSIE----------LPS-----------DASFQWLDLNREMLVKDVVKIDNQIPLLVVQ 199
+ E LPS + + + +VKD++ ++NQIPLLV++
Sbjct: 152 NEKDETRRLLPDLVLLPSPFPSFVEQKLYSCLIEGNLMTHDEIVKDILMLENQIPLLVLK 211
Query: 200 WILAQSLTTEVELPLLLHHFCQTISPFAL--------VSRNSIYDIHGIKDESHHLLHFM 233
IL ++ + +L LL FC +SP L + D+ I ++SHHLLHF+
Sbjct: 212 NILPENFSN--KLDLLFFRFCDFVSPIQLPPHDIPEFMRYRGYTDLSQILEQSHHLLHFL 267
BLAST of Sed0005584 vs. ExPASy TrEMBL
Match:
A0A1S3CB64 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498708 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 1.3e-15
Identity = 73/245 (29.80%), Postives = 117/245 (47.76%), Query Frame = 0
Query: 20 EDATRTLPFFLKLPESLSRDRHSRDVLLPGLIALGP-HNANNRIESYRLPRIANGVR--R 79
+ A +T KLP S++ ++ + P IA GP H+ N + L ++ N +
Sbjct: 32 QTALQTPTSIFKLPHSIT--NNNPQLYFPRYIAFGPYHHFRNDLYQMELHKLHNAINSTH 91
Query: 80 QLDLPEYDQLCSQFSTLKLRIQACYGTGFEIDSVNSDRIMLVDTLFLLGLLLHISAPVEN 139
LP+ +Q+ Q L ++I++C+ EI S IML+D LFL+ LL P+ N
Sbjct: 92 SFQLPQLNQIVQQLKQLDIKIRSCFDNFLEIGSEALAWIMLIDGLFLIQLL-----PISN 151
Query: 140 SVSIE----------LPS-----------DASFQWLDLNREMLVKDVVKIDNQIPLLVVQ 199
+ E LPS + + + +VKD++ ++NQIPLLV++
Sbjct: 152 NEKDETRRLLPDLVLLPSPFPSFVEQKLYSCLIEGNLMTHDEIVKDILMLENQIPLLVLK 211
Query: 200 WILAQSLTTEVELPLLLHHFCQTISPFAL--------VSRNSIYDIHGIKDESHHLLHFM 233
IL ++ + +L LL FC +SP L + D+ I ++SHHLLHF+
Sbjct: 212 NILPENFSN--KLDLLFFKFCDFVSPIQLPPHDIPEFMRYRGYTDLSQILEQSHHLLHFL 267
BLAST of Sed0005584 vs. TAIR 10
Match:
AT3G02645.1 (Plant protein of unknown function (DUF247) )
HSP 1 Score: 51.2 bits (121), Expect = 1.8e-06
Identity = 49/198 (24.75%), Postives = 94/198 (47.47%), Query Frame = 0
Query: 44 DVLLPGLIALGPHNA----NNRIESYRLPRIANGVRRQLDLPEYDQLCSQFSTLKLRIQA 103
D P +++GP++ + +E Y+L IA +R Q + + L + +++++I+A
Sbjct: 58 DSYTPHRVSIGPYHCLKPELHEMERYKL-MIARKIRNQYNSFRFHDLVEKLQSMEIKIRA 117
Query: 104 CYGTGFEIDSVNSDRIMLVDTLFLLGLL-LHISAPVENSVSIELPSDASFQWLDLNREML 163
CY + IM VD+ FL+ L ++ VE ++ + +
Sbjct: 118 CYHKYIGFNGETLLWIMAVDSSFLIEFLKIYSFRKVETLIN------------RVGHNEI 177
Query: 164 VKDVVKIDNQIPLLVVQWILAQSL-TTEVELPLLLH---HFCQTISPFALVSRNSIYDIH 223
++D++ I+NQIPL V++ L L +TE LLL C+ +SP ++ + +
Sbjct: 178 LRDIMMIENQIPLFVLRKTLEFQLESTESADDLLLSVLTGLCKDLSPL-VIKFDDDQILK 237
Query: 224 GIKDESHHLLHFMYLSIL 233
E +H+L F+Y I+
Sbjct: 238 AQFQECNHILDFLYQMIV 241
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C897 | 2.6e-05 | 24.75 | Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DW70 | 3.2e-19 | 36.32 | putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102367... | [more] |
A0A6J1DUT7 | 3.2e-19 | 37.67 | putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102368... | [more] |
A0A6J1IBB2 | 1.1e-16 | 34.98 | putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111471968 P... | [more] |
A0A5A7T6Y5 | 9.7e-16 | 29.80 | Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S3CB64 | 1.3e-15 | 29.80 | putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498708 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G02645.1 | 1.8e-06 | 24.75 | Plant protein of unknown function (DUF247) | [more] |