Sed0005580 (gene) Chayote v1

Overview


Name	Sed0005580
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG13: 21275685 .. 21277961 (+)
RNA-Seq Expression	Sed0005580
Synteny	Sed0005580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACGATGCCAAGTAAAGTTGCGTACCGCGTAGTGTAAACTGATGCTCTCAATCTCTTTCTGTTTATATGCCTTAGTTGTCTTTGATCTGTTCTAACGCACTTCCATCGTCGAGGATTTGCAGAAGAAAATTTGTTCAGATTCTTGAAGATCAGAAAGCAAATCTCCATCAACCTTTACAATGGTTCGATTTTCATCTGCGCCGCAAATTTGGCTTTCCTGTTTGCACCGTTTGTGCTATAAATCGAGCAATTCAGGTTAGTATCAGTTCGATTTCATAGCTGGACGAAGATCCAACAGAGAGAATCACGATTGTGTTTGATTTTGTGTTTTAGGTCGAAAATGGCGGGGATGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCTTGGAAGCAGCAGCTTCTCAAAGGAAAACAATCGGATCGACTGGTAATGTATTGGTTTCTTGTTGTTCCTCTTAGTGTTCGTCTTTGTTTTTGTGAACAATTTTGATTTTCTGCAGATTGTTGTGGATTTCACTGCCGCGTGGTGCGGTCCGTGCCGCGCCATCGCTCCGTTTTTTGCGGAGTTGGCGAAGAAGATGGGTGATGTTATATTCTTGAAGGTTGATGTTGATGAATTGATTGTAAGTTGATTCAAGCTCTGTCCTGCAGAACTTTTATACTGTTAATTGAGTGATTGTTATGAGAATTATAGGGGCGGTTTGTTTGGCATATTTAGGTAGGATTTAGTTTTAGGATTTGATAACTCCTCATAAAAAATCTATGTCCAAACGAGTTTTTACTACTCTCGTTTTTATTTTTAAAAATAACTCTCATTTCTAATAATTCATTTTAAATGAGTCAAAACAACTCGTTTTTAATCATTCATTTTTAATCGTTTCTTTTCTAACTACTAAAAATAACTACTCATTTTAAACCTACATTCAAACAAGGTTTTGACTCTAACTCCTTTACATAGAAACTACATCCAAACGAGTTTTTGGCTACGACTCTCAATTTTTTACTACTTAACATAACTCCTCAATATAACTCCTTAAAGCTAAATCCTATCTAAATATGTCAAACAGACAGCCCCATAAACAACAATCAAGAATAAGAAAATGCAAGACATAGAGCACACAAATTTACTTCTTCTACCTTCACGGGCATTTGAATTAGGAGATAAGAATATAAATATTAAGTAAAGAGGTAAGGATTTTAAGATTTATACAATGCACCTCCCATAAAATCCTAAGACATCATTTTGAACCAAATTACATAAAAGCCCATTACAAAAATATAAACCATTGTTGACATTGAATATTTGTAGTGCAACATAGTTTAAGACATTTTAATAGTGATATTGTTAAGACCGAAAACCATTGGAGTTTTTTCTGCCGACTTTTGCTGCTGAATGGGGAGTGAGGTTTCATATCCATTTTATTTTAGTAGATAAGAATACAAATGTTTGGTGAAGGATAAGGATTTTAAGAGAATTTTATATATTTCACTTCTGGTCTAAGTCCTAATGCATCATTTAACTCAACTTACATAAAATCCAATGCAAAAATATAAAATGTGATTAACATATTTTTTAAGTTTTGGGAGTGTTGCCCCGTACCCCCACCGGACGATTTGCCTTTGAACCCTAACTTATGTGCAACATAATTCTTGACATTTAAATAGTGATATTGTTAAGATTGAAAACAATGAAGCCCCCAAGGGGGGTGGTGCAGTGATTGAAGATTTAGGTTTTGAGGGCATGCTCCCCTCAAGGTCCTAGGTTCAAGACTCACTTGCGACATTACTCCTTCGATTTCTCCGGTGCCTAACCTAGGAACAGGTGTGGTTACCCTTGTTTAAAAAAAAATTGAAATCAATGAAATTATTGCTGTTTTTTCTGCAGACTGTTGCTGCAGAATGGGGAGTGAGTGCACTACCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGACAGGTTTGTAGGTGCAAGGAAAGATGAGTTGCAGACGATTGTGTTACAGCATGCATAATGGAAAGTTTACATTGAGGTGATACCATCATTTGTTCTTGGATTTCACTGGAAGAGAAAAAAAAAAGTTTATGCAACTTTTGCGAGTTGCTACAAATTGATGCTTTTAGTTTTAGAATAACTTTGATTTTTTCTTGTGTTTGATTGTCTGTCAATCAGTTTACTATTTCCAGGCTACTGAACTTATCATGTAACAAATGAGCATCTATTTTTTTGTTGAATAAAAATGAGCAACTATTTGAAGTTGCTTTAATACATTATCA

mRNA sequence

GAACGATGCCAAGTAAAGTTGCGTACCGCGTAGTGTAAACTGATGCTCTCAATCTCTTTCTGTTTATATGCCTTAGTTGTCTTTGATCTGTTCTAACGCACTTCCATCGTCGAGGATTTGCAGAAGAAAATTTGTTCAGATTCTTGAAGATCAGAAAGCAAATCTCCATCAACCTTTACAATGGTTCGATTTTCATCTGCGCCGCAAATTTGGCTTTCCTGTTTGCACCGTTTGTGCTATAAATCGAGCAATTCAGGTCGAAAATGGCGGGGATGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCTTGGAAGCAGCAGCTTCTCAAAGGAAAACAATCGGATCGACTGATTGTTGTGGATTTCACTGCCGCGTGGTGCGGTCCGTGCCGCGCCATCGCTCCGTTTTTTGCGGAGTTGGCGAAGAAGATGGGTGATGTTATATTCTTGAAGGTTGATGTTGATGAATTGATTACTGTTGCTGCAGAATGGGGAGTGAGTGCACTACCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGACAGGTTTGTAGGTGCAAGGAAAGATGAGTTGCAGACGATTGTGTTACAGCATGCATAATGGAAAGTTTACATTGAGGTGATACCATCATTTGTTCTTGGATTTCACTGGAAGAGAAAAAAAAAAGTTTATGCAACTTTTGCGAGTTGCTACAAATTGATGCTTTTAGTTTTAGAATAACTTTGATTTTTTCTTGTGTTTGATTGTCTGTCAATCAGTTTACTATTTCCAGGCTACTGAACTTATCATGTAACAAATGAGCATCTATTTTTTTGTTGAATAAAAATGAGCAACTATTTGAAGTTGCTTTAATACATTATCA

Coding sequence (CDS)

ATGGCGGGGATGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCTTGGAAGCAGCAGCTTCTCAAAGGAAAACAATCGGATCGACTGATTGTTGTGGATTTCACTGCCGCGTGGTGCGGTCCGTGCCGCGCCATCGCTCCGTTTTTTGCGGAGTTGGCGAAGAAGATGGGTGATGTTATATTCTTGAAGGTTGATGTTGATGAATTGATTACTGTTGCTGCAGAATGGGGAGTGAGTGCACTACCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGACAGGTTTGTAGGTGCAAGGAAAGATGAGTTGCAGACGATTGTGTTACAGCATGCATAA

Protein sequence

MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA

Homology

[Close]

BLAST of Sed0005580 vs. NCBI nr
Match: KAG7037881.1 (Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.0 bits (528), Expect = 4.3e-50
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIACRTVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRA+AP FAELAKKM +VI
Sbjct: 1   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQ+A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Sed0005580 vs. NCBI nr
Match: KAG6608561.1 (Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.0 bits (528), Expect = 4.3e-50
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIACRTVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRA+AP FAELAKKM +VI
Sbjct: 36  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 95

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQ+A
Sbjct: 96  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 147

[Close]

BLAST of Sed0005580 vs. NCBI nr
Match: XP_022982430.1 (thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 7.3e-50
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIAC TVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRA+AP FAELAKK+ +VI
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQHA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Sed0005580 vs. NCBI nr
Match: XP_022941032.1 (thioredoxin H1-like [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIACRTVGSWKQQLLKGKQS++LIVVDFTA WCGPCRA+AP FAELAKKM +VI
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQ+A
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Sed0005580 vs. NCBI nr
Match: XP_023525273.1 (thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.3 bits (521), Expect = 2.8e-49
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIAC TVGSWKQQ+LKGKQS++LIVVDFTAAWCGPCRA+AP FAELAKKM +VI
Sbjct: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQ+A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-36
Identity = 65/106 (61.32%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 6   EVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKVD 65
           +VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR IAPFFA+LAKK+ +V+FLKVD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 66  VDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
            DEL +VA++W + A+P FMFLK GK++D+ VGA+KDELQ+ + +H
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.7e-36
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 6   EVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKVD 65
           +VI C TV +W +QL KG  +  LIVVDFTA+WCGPCR IAPF AELAKK+ +V FLKVD
Sbjct: 7   QVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVD 66

Query: 66  VDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           VDEL TVA EW V ++P FMFLK GK++D+ VGA+KDELQ  + +H
Sbjct: 67  VDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-34
Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MA   +VI   TV +W + L KG    +LIVVDFTA+WCGPC+ IA F+AELAKKM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           FLKVDVDEL +VA +W V A+P FMFLK GK+VD+ VGA+KDELQ  + +H
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.6e-34
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 6   EVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKVD 65
           +V  C  V  W +   KG ++ +L+VVDFTA+WCGPCR IAP  A++AKKM  VIFLKVD
Sbjct: 13  QVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVD 72

Query: 66  VDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           VDEL TV+AEW V A+P F+F+K+GK VDR VGA+K+ELQ  +++HA
Sbjct: 73  VDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-31
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIAC T+  W +++    +S +LIV+DFTA+WC PCR IAP FAE+AKK  +V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           F K+DVDEL  VA E+ V A+P F+F+K G ++DR VGA KDE+   +++H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0005580 vs. ExPASy TrEMBL
Match: A0A6J1IZB4 (thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.5e-50
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIAC TVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRA+AP FAELAKK+ +VI
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQHA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Sed0005580 vs. ExPASy TrEMBL
Match: A0A6J1FL98 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.0e-50
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIACRTVGSWKQQLLKGKQS++LIVVDFTA WCGPCRA+AP FAELAKKM +VI
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL+ VAAEWGVSALPCFMFLKNGKVVDRFVGARKD+LQ IVLQ+A
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Sed0005580 vs. ExPASy TrEMBL
Match: A0A6J1IM69 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.2e-47
Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MA  S VI C TVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRAIAP FAELAKKM +VI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVD+L TVAAEWGV ALPCFMFLKNGKVV RFVGARKD LQ IVLQHA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Sed0005580 vs. ExPASy TrEMBL
Match: A0A6J1DWZ0 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           M    EVIAC TVGSWKQQLLKGKQS++LIVVDFTAAWCGPCRA+AP FAELA KM  VI
Sbjct: 1   MVDKREVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPLFAELANKMSSVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVDEL TVAAEWGVSALPCF+FLKNG +VDRFVGAR+D LQ I+LQHA
Sbjct: 61  FLKVDVDELTTVAAEWGVSALPCFVFLKNGNLVDRFVGARRDVLQKIILQHA 112

[Close]

BLAST of Sed0005580 vs. ExPASy TrEMBL
Match: A0A5A7V9W3 (Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.0e-46
Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MA  S+VI C TV SWKQQLLKGKQSD+LIVVDFTAAWCGPCRAIAP F ELA+KM +VI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQHA 113
           FLKVDVD+L TVAAEWGVSALPCFMFLKNG VVDRFVGARKD L+ +VL HA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Sed0005580 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 153.7 bits (387), Expect = 8.9e-38
Identity = 65/106 (61.32%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 6   EVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKVD 65
           +VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR IAPFFA+LAKK+ +V+FLKVD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 66  VDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
            DEL +VA++W + A+P FMFLK GK++D+ VGA+KDELQ+ + +H
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0005580 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MAG  EVIAC T+  W +++    +S +LIV+DFTA+WC PCR IAP FAE+AKK  +V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           F K+DVDEL  VA E+ V A+P F+F+K G ++DR VGA KDE+   +++H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0005580 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-31
Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 6   EVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKK-MGDVIFLKV 65
           +VI C T   W  QL K K+S++LIV+DFTA+WC PCR IAP F +LAKK M   IF KV
Sbjct: 7   QVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKV 66

Query: 66  DVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           DVDEL +VA E+GV A+P F+F+K G+VVD+ VGA K++LQ  +++H
Sbjct: 67  DVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0005580 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-30
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 1   MAGMSEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVI 60
           MA   EVIAC TV  W ++L    +S +LIV+DFTA WC PCR IAP FA+LAKK  DV+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQTIVLQH 112
           F KVDVDEL TVA E+ V A+P F+F+K G++ +  VGA K+E+   + +H
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]

BLAST of Sed0005580 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 107.1 bits (266), Expect = 9.5e-24
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 5   SEVIACRTVGSWKQQLLKGKQSDRLIVVDFTAAWCGPCRAIAPFFAELAKKMGDVIFLKV 64
           S V+   +   W+    + K+S++L+VVDF+A+WCGPCR I P    +A K  DV F+K+
Sbjct: 25  SRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKL 84

Query: 65  DVDELITVAAEWGVSALPCFMFLKNGKVVDRFVGARKDELQ 106
           DVDEL  VA E+ V+A+P F+ +K GK ++R +GA+KDEL+
Sbjct: 85  DVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELE 125

The following BLAST results are available for this feature:

BLAST of Sed0005580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037881.1	4.3e-50	88.39	Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608561.1	4.3e-50	88.39	Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982430.1	7.3e-50	87.50	thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucu...	[more]
XP_022941032.1	1.2e-49	87.50	thioredoxin H1-like [Cucurbita moschata]	[more]
XP_023525273.1	2.8e-49	86.61	thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-...	[more]

BLAST of Sed0005580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29448	1.2e-36	61.32	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q43636	4.7e-36	64.15	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q07090	3.4e-34	60.36	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	7.6e-34	58.88	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	3.5e-31	53.15	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Sed0005580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZB4	3.5e-50	87.50	thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1	[more]
A0A6J1FL98	6.0e-50	87.50	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1	[more]
A0A6J1IM69	6.2e-47	85.71	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1	[more]
A0A6J1DWZ0	1.1e-46	82.14	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1	[more]
A0A5A7V9W3	4.0e-46	82.14	Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE...	[more]

BLAST of Sed0005580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	8.9e-38	61.32	thioredoxin H-type 1	[more]
AT1G45145.1	2.5e-32	53.15	thioredoxin H-type 5	[more]
AT1G19730.1	4.7e-31	57.01	Thioredoxin superfamily protein	[more]
AT5G42980.1	4.0e-30	54.05	thioredoxin 3	[more]
AT5G39950.1	9.5e-24	46.53	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 30..38 score: 51.98 coord: 38..47 score: 67.0 coord: 77..88 score: 31.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..112 e-value: 1.8E-36 score: 126.8
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 25..108 e-value: 9.19197E-36 score: 115.733
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 12..107 e-value: 3.2E-27 score: 94.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..112 score: 13.335756
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005580.1	Sed0005580.1	mRNA
Sed0005580.2	Sed0005580.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015035	protein-disulfide reductase activity