Sed0005574 (gene) Chayote v1

Overview


Name	Sed0005574
Type	gene
Organism	Sechium edule (Chayote v1)
Description	17.5 kDa class I heat shock protein-like
Location	LG13: 19613414 .. 19614291 (-)
RNA-Seq Expression	Sed0005574
Synteny	Sed0005574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATATTCTTCACAAAATAAAAAAATAAAAAAAAATAAATGAAGTAAGCCATGTATCTCAAAGTTTCCAGAAAATGCGACAGATTTCATTTGAAGAACAAAGAAATTTCTAGAGAAAGCGAGAAGCCTTCAACCAATCACTATAAATTCACACTTCCTTCACATTCTTCTTCCCCAATCAGAAACCCCAAACCACAAATTCCCTCTCAAATAATGTCATCAATCCCCTCCAAATCCACAAGATGTCGATGATTCCAAGCTTCTTCGGCGGCCGACGGAGCAGCATCTTCGATCCATTTTCCGCTTTCGACCTCTCAGATCCGATCGATTTTCACTTTCCTTCTCCGATTTCTCAACAAACCTCGGCTCTGATGAACGCTACCGTGGATTGGAAGGAGACGCCGGAGGCGCACATCATGAAGGCCGATCTGCCTGGACTCAAGAAAGAGGAGCTCAAAGTCGAGATCGAAGACGGGAAAGTGATTCAGATCAGCGGCGAAAGGAGCGTCGAGAGGGAGGACAAGAACGAGAAATGGCATCGGATCGAGCGCAGCGGCGGAAAGTTTCAGAGGAGATTTAGGCTGCCGGAAGATGCGATAACCGAGGAAATTAGGGCTTCTTTGGAGGACGGAGTTCTCACCGTGACGGTTCCCAAGGTGGAGGCGACGGCGGCGGATGTGAAGTCCGTTGAGATTTCCGGCTGATGGATCTTGATTTTGTATGTCTAATTACTGTTTTTCATGAATTGTGTGTTACTGATTTTGAACATGTAAGCGTTATATTCGTAAAAAGAGAAAAACTTACCTATACATCCATGATGTCTAGATAAACCCAATTTATATACATATGTGGCAAATTTAGAGCCACACAAAAATTTC

mRNA sequence

TAAATATTCTTCACAAAATAAAAAAATAAAAAAAAATAAATGAAGTAAGCCATGTATCTCAAAGTTTCCAGAAAATGCGACAGATTTCATTTGAAGAACAAAGAAATTTCTAGAGAAAGCGAGAAGCCTTCAACCAATCACTATAAATTCACACTTCCTTCACATTCTTCTTCCCCAATCAGAAACCCCAAACCACAAATTCCCTCTCAAATAATGTCATCAATCCCCTCCAAATCCACAAGATGTCGATGATTCCAAGCTTCTTCGGCGGCCGACGGAGCAGCATCTTCGATCCATTTTCCGCTTTCGACCTCTCAGATCCGATCGATTTTCACTTTCCTTCTCCGATTTCTCAACAAACCTCGGCTCTGATGAACGCTACCGTGGATTGGAAGGAGACGCCGGAGGCGCACATCATGAAGGCCGATCTGCCTGGACTCAAGAAAGAGGAGCTCAAAGTCGAGATCGAAGACGGGAAAGTGATTCAGATCAGCGGCGAAAGGAGCGTCGAGAGGGAGGACAAGAACGAGAAATGGCATCGGATCGAGCGCAGCGGCGGAAAGTTTCAGAGGAGATTTAGGCTGCCGGAAGATGCGATAACCGAGGAAATTAGGGCTTCTTTGGAGGACGGAGTTCTCACCGTGACGGTTCCCAAGGTGGAGGCGACGGCGGCGGATGTGAAGTCCGTTGAGATTTCCGGCTGATGGATCTTGATTTTGTATGTCTAATTACTGTTTTTCATGAATTGTGTGTTACTGATTTTGAACATGTAAGCGTTATATTCGTAAAAAGAGAAAAACTTACCTATACATCCATGATGTCTAGATAAACCCAATTTATATACATATGTGGCAAATTTAGAGCCACACAAAAATTTC

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTCTTCGGCGGCCGACGGAGCAGCATCTTCGATCCATTTTCCGCTTTCGACCTCTCAGATCCGATCGATTTTCACTTTCCTTCTCCGATTTCTCAACAAACCTCGGCTCTGATGAACGCTACCGTGGATTGGAAGGAGACGCCGGAGGCGCACATCATGAAGGCCGATCTGCCTGGACTCAAGAAAGAGGAGCTCAAAGTCGAGATCGAAGACGGGAAAGTGATTCAGATCAGCGGCGAAAGGAGCGTCGAGAGGGAGGACAAGAACGAGAAATGGCATCGGATCGAGCGCAGCGGCGGAAAGTTTCAGAGGAGATTTAGGCTGCCGGAAGATGCGATAACCGAGGAAATTAGGGCTTCTTTGGAGGACGGAGTTCTCACCGTGACGGTTCCCAAGGTGGAGGCGACGGCGGCGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

Protein sequence

MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPISQQTSALMNATVDWKETPEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG

Homology

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BLAST of Sed0005574 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 250.4 bits (638), Expect = 1.0e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVE+EDGKVIQISGERS+E+EDKNEKWHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           LPEDA  EEIRAS+E+GVLTVTVPK E    DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of Sed0005574 vs. NCBI nr
Match: XP_008457419.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97354.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFF GR+SS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGER+VE+EDKNEKWHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PEDA TEEIRAS+E+GVLTVTVPK E    DVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGERSVE+EDKNEKWHR+ERS GKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PED   EEIRAS+E+GVLTVTVPK E   ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. NCBI nr
Match: XP_038894963.1 (18.5 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61
Identity = 126/160 (78.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGERSVE+EDKNE WHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNETWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PEDA  EEIRAS+E+GVLTVTVPK E     VKSVEISG
Sbjct: 121 MPEDAKMEEIRASMENGVLTVTVPKAEGKKTVVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. NCBI nr
Match: XP_023522675.1 (17.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.4 bits (625), Expect = 3.3e-61
Identity = 126/160 (78.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPI-------SQQTSALMNATVDWKET 60
           MSMIPSFFGGRRS+I+DPF+ FDLSDP DFHFPS I       S++TSALMN  VDWKET
Sbjct: 1   MSMIPSFFGGRRSNIYDPFATFDLSDPFDFHFPSSILTQVPEVSRETSALMNTRVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH+MKADLPG+KKEE+KVEIEDGKV+QISGERSVE+E+KNE WHRIERS GKFQRRFR
Sbjct: 61  PEAHVMKADLPGMKKEEVKVEIEDGKVLQISGERSVEKENKNETWHRIERSCGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           LPEDA  EEIRAS+E+GVLTVTVPK E    DVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEEKKTDVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.6e-53
Identity = 101/154 (65.58%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPI-DFHFPSPISQQTSALMNATVDWKETPEAHIM 60
           MS+IPS FGGRRS++FDPFS  D+ DP  DFHFP+ +S + SA +N  VDWKETPEAH+ 
Sbjct: 1   MSLIPSIFGGRRSNVFDPFS-LDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVF 60

Query: 61  KADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDAI 120
           +AD+PGLKKEE+KV+IED +V+QISGER++E+EDKN+ WHR+ERS G F RRFRLPE+A 
Sbjct: 61  EADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAK 120

Query: 121 TEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
            E+++AS+E+GVLTVTVPK E    DVK++EISG
Sbjct: 121 VEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-52
Identity = 102/154 (66.23%), Postives = 130/154 (84.42%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPI-DFHFPSPISQQTSALMNATVDWKETPEAHIM 60
           MS+IPSFFGGRRSS+FDPFS  D+ DP  DF FPS +S + SA ++  VDWKETPEAH+ 
Sbjct: 1   MSLIPSFFGGRRSSVFDPFS-LDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVF 60

Query: 61  KADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDAI 120
           KAD+PGLKKEE+K+EI+DG+V+QISGER+VE+EDKN+ WHR+ERS GK  RRFRLPE+A 
Sbjct: 61  KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAK 120

Query: 121 TEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
            ++++AS+E+GVLTVTVPK E    DVK+++ISG
Sbjct: 121 VDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.4e-52
Identity = 103/155 (66.45%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPI-DFHFP-SPISQQTSALMNATVDWKETPEAHI 60
           MS+IP FFGGRRS++FDPFS  D+ DP  DFH P S +S + SA ++  VDWKETPEAH+
Sbjct: 1   MSLIPGFFGGRRSNVFDPFS-LDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHV 60

Query: 61  MKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDA 120
            KAD+PGLKKEE+KV+IED +V+QISGER+VE+EDKN+ WHR+ERS GKF RRFRLPE+A
Sbjct: 61  FKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENA 120

Query: 121 ITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
              E++AS+E+GVLTVTVPK E    DVK++EISG
Sbjct: 121 KVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.1e-51
Identity = 102/162 (62.96%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPI-DFHFPSPI--------SQQTSALMNATVDWK 60
           MS+IP+FFGGRR+++FDPFS  D+ DP  DF FP+ +        S++ SA ++  VDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPFS-LDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRR 120
           ETPEAH+ KAD+PGLKKEE+KV+IED KV+QISGER+VE+EDKN+ WHR+ERS GKF RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           FRLPE+A  E+++AS+E+GVLTVTVPK E    DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot
Match: P04795 (17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-50
Identity = 99/155 (63.87%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPI-DFHFP-SPISQQTSALMNATVDWKETPEAHI 60
           MS+IPS FGG RS++FDPFS  D+ DP  DFH P S +S + SA +N  VDWKET EAH+
Sbjct: 1   MSLIPSIFGGPRSNVFDPFS-LDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHV 60

Query: 61  MKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDA 120
           +KAD+PGLKKEE+KV+IED +V+QISGER+VE+EDKN+ WHR++RS GKF RRFRLPE+A
Sbjct: 61  LKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENA 120

Query: 121 ITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
             E+++A +E+GVLTVT+PK E   +DVK +EISG
Sbjct: 121 KVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154

[Close]

BLAST of Sed0005574 vs. ExPASy TrEMBL
Match: H6TB43 (HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.9e-63
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVE+EDGKVIQISGERS+E+EDKNEKWHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           LPEDA  EEIRAS+E+GVLTVTVPK E    DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of Sed0005574 vs. ExPASy TrEMBL
Match: A0A5D3BEA2 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001640 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFF GR+SS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGER+VE+EDKNEKWHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PEDA TEEIRAS+E+GVLTVTVPK E    DVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. ExPASy TrEMBL
Match: A0A1S3C6S1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFF GR+SS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGER+VE+EDKNEKWHRIERS GKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PEDA TEEIRAS+E+GVLTVTVPK E    DVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGERSVE+EDKNEKWHR+ERS GKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PED   EEIRAS+E+GVLTVTVPK E   ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPIDFHFPSPIS-------QQTSALMNATVDWKET 60
           MSMIPSFFGGRRSS+FDPF+ FDLSDP DFHFPS IS       ++TSA++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH++KADLPGLKKEE+KVEIEDGKVIQISGERSVE+EDKNEKWHR+ERS GKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +PED   EEIRAS+E+GVLTVTVPK E   ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Sed0005574 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.4e-49
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPID-FHFPSPI----SQQTSALMNATVDWKETPE 60
           MS+IPS FGGRR+++FDPFS  D+ DP + F  PS +    +   +A  NA VDW+ETPE
Sbjct: 1   MSLIPSIFGGRRTNVFDPFS-LDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPE 60

Query: 61  AHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLP 120
           AH+ KADLPGL+KEE+KVE+EDG ++QISGERS E E+KN+KWHR+ERS GKF RRFRLP
Sbjct: 61  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLP 120

Query: 121 EDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           E+A  EEI+AS+E+GVL+VTVPKV     +VKS++ISG
Sbjct: 121 ENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Sed0005574 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-49
Identity = 98/154 (63.64%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 1   MSMIPSFF-GGRRSSIFDPFSAFDLSDPIDFHFPSPISQQTSALMNATVDWKETPEAHIM 60
           MSMIPSFF   RRS+IFDPFS  D+ DP      S +S++ SA++NA VDW+ETPEAH+ 
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFS-LDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVF 60

Query: 61  KADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPEDAI 120
           KADLPGLKKEE+KVEIE+  V++ISGER VE+EDKN+ WHR+ERS G+F RRFRLPE+  
Sbjct: 61  KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVK 120

Query: 121 TEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
            ++++A++E+GVLTVTVPK E   ADVKS++ISG
Sbjct: 121 MDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Sed0005574 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 191.0 bits (484), Expect = 6.8e-49
Identity = 96/157 (61.15%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPID-FHFP---SPISQQTSALMNATVDWKETPEA 60
           MS++PSFFGGRR+++FDPFS  D+ DP + F  P   +  ++  +A  NA VDW+ETPEA
Sbjct: 1   MSLVPSFFGGRRTNVFDPFS-LDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPE 120
           H+ KAD+PGLKKEE+KVE+EDG ++QISGERS E E+K++ WHR+ERS GKF RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 DAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           +A  EE++AS+E+GVL+VTVPKV+ +  +VKSV+ISG
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Sed0005574 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 188.7 bits (478), Expect = 3.4e-48
Identity = 99/160 (61.88%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFSAFDLSDPID-FHFPS------PISQQTSALMNATVDWKET 60
           MS+IPS FGGRRS++FDPFS  DL DP + F  PS        ++  +A  NA VDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHIMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFR 120
           PEAH+ KADLPGLKKEE+KVE+ED  V+QISGERS E E+KN+KWHR+ER+ GKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAITEEIRASLEDGVLTVTVPKVEATAADVKSVEISG 154
           LPE+A  EE++A++E+GVLTV VPK       VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Sed0005574 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 6.4e-47
Identity = 97/158 (61.39%), Postives = 125/158 (79.11%), Query Frame = 0


Query: 1   MSMIPSFFGGRR--SSIFDPFSAFDLSDPI-DFHFPSPISQQTSALMNATVDWKETPEAH 60
           MS+IPSFFG  R  +SIFDPFS  D+ DP  +  FPS +S +TSA+ NA VDWKET EAH
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFS-LDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAH 60

Query: 61  IMKADLPGLKKEELKVEIEDGKVIQISGERSVEREDKNEKWHRIERSGGKFQRRFRLPED 120
           + KADLPG+KKEE+KVEIED  V++ISGER VE+E+K + WHR+ERS G+F R+F+LPE+
Sbjct: 61  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 120

Query: 121 AITEEIRASLEDGVLTVTVPKVEAT--AADVKSVEISG 154
              ++++AS+E+GVLTVTVPKVE     A VKS++ISG
Sbjct: 121 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Sed0005574 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55790.1	1.0e-62	78.75	HSP18.2A [Citrullus lanatus]	[more]
XP_008457419.1	2.3e-62	78.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1...	[more]
XP_008457420.1	3.0e-62	78.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]
XP_038894963.1	1.9e-61	78.75	18.5 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_023522675.1	3.3e-61	78.75	17.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0005574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04793	7.6e-53	65.58	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P02519	1.3e-52	66.23	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P04794	6.4e-52	66.45	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]
P05478	7.1e-51	62.96	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P04795	4.6e-50	63.87	17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=...	[more]

BLAST of Sed0005574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB43	4.9e-63	78.75	HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BEA2	1.1e-62	78.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C6S1	1.1e-62	78.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111...	[more]
A0A5D3BFY1	1.4e-62	78.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	1.4e-62	78.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]

BLAST of Sed0005574 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	2.4e-49	62.66	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.1e-49	63.64	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	6.8e-49	61.15	heat shock protein 17.4	[more]
AT5G59720.1	3.4e-48	61.88	heat shock protein 18.2	[more]
AT1G07400.1	6.4e-47	61.39	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 49..152 e-value: 1.7E-28 score: 98.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 39..153 score: 30.658154
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..153 e-value: 2.1E-44 score: 152.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 17..153
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..153
None	No IPR available	PANTHER	PTHR11527:SF319	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..153
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 47..138 e-value: 1.15375E-50 score: 155.155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005574.1	Sed0005574.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding