Sed0005507 (gene) Chayote v1

Overview


Name	Sed0005507
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	LG07: 5549713 .. 5550708 (-)
RNA-Seq Expression	Sed0005507
Synteny	Sed0005507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCATATCTCCCTATCTCTCACATTCACTTTCCATCATCACCAACCAAACTCAAGAGTTCTTCCACCATTGCAGCTCCTCTTCAAGCTTCTTCTTCTTCGACAACCTCCATGGCCCGACCTCAACAACGCTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCTCTATTGTAAATCTCCTCCTGCATTTCTCTCTTTCATATTGCTTCACATGACTGTGGAGTCTAAATTTTCATAAGATATTAGAAAATTGTATATAGCCCTAACCTAAAACAAATCAATTAATTAATTTTGGGGCCAATTGCTTTTTTTCTCATTTTTGCTGAAAAAGATACAATATTCATTTAAATCTAAATATGCAAGAAACATACAACAACCAAATTACAAAGAATTCAAAAAAAAAAAATCATTTAGAACAATTGGAAGCCAAATCATAAGACTTCAAATATTTCATTTTTTACATTGCTTAAAAACTTTGAAATTTTCAGGAAAACAAGAATATGGTTGGGGACGTTCGAGACAGCAGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGGTTGATGTGTGGACCGAAAGCACGAACCAACTTCCAATTCAACCCGAACGAGTCATCGTCGTCTTCCTCCTCCTCTAAGCTTCTCTCTGCGGCATTGATAGCAAAATTACATAAATGTCATTTAGCCTCACTCCAAATCGTCAAAAAGCACGTCCAGAAACAACAACACCCCGAATCTGACCCCACCTACGCGGCGTACGGCAGCCCTTCGCCGACCACTGCCGGAGCCACCACCGGGCAATGGTGGCCGGAAGATACATGGGTGTACTCCAACGAATCCCAAATGGAGATCAATTATAATAACAGCAACAATGTTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTACTAGACCTCGGACCAATCGAAATTATCACTTAA

mRNA sequence

CCTTCATATCTCCCTATCTCTCACATTCACTTTCCATCATCACCAACCAAACTCAAGAGTTCTTCCACCATTGCAGCTCCTCTTCAAGCTTCTTCTTCTTCGACAACCTCCATGGCCCGACCTCAACAACGCTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCTCTATTGAAAACAAGAATATGGTTGGGGACGTTCGAGACAGCAGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGGTTGATGTGTGGACCGAAAGCACGAACCAACTTCCAATTCAACCCGAACGAGTCATCGTCGTCTTCCTCCTCCTCTAAGCTTCTCTCTGCGGCATTGATAGCAAAATTACATAAATGTCATTTAGCCTCACTCCAAATCGTCAAAAAGCACGTCCAGAAACAACAACACCCCGAATCTGACCCCACCTACGCGGCGTACGGCAGCCCTTCGCCGACCACTGCCGGAGCCACCACCGGGCAATGGTGGCCGGAAGATACATGGGTGTACTCCAACGAATCCCAAATGGAGATCAATTATAATAACAGCAACAATGTTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTACTAGACCTCGGACCAATCGAAATTATCACTTAA

Coding sequence (CDS)

ATGGCCCGACCTCAACAACGCTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCTCTATTGAAAACAAGAATATGGTTGGGGACGTTCGAGACAGCAGAGGACGCAGCCCGAGCCTACGACGAGGCAGCACGGTTGATGTGTGGACCGAAAGCACGAACCAACTTCCAATTCAACCCGAACGAGTCATCGTCGTCTTCCTCCTCCTCTAAGCTTCTCTCTGCGGCATTGATAGCAAAATTACATAAATGTCATTTAGCCTCACTCCAAATCGTCAAAAAGCACGTCCAGAAACAACAACACCCCGAATCTGACCCCACCTACGCGGCGTACGGCAGCCCTTCGCCGACCACTGCCGGAGCCACCACCGGGCAATGGTGGCCGGAAGATACATGGGTGTACTCCAACGAATCCCAAATGGAGATCAATTATAATAACAGCAACAATGTTCATCATCAGCAATGCCTTCAGCCTCTTGAAGATGATCACATTGAACAAATGATACAAGAGCTACTAGACCTCGGACCAATCGAAATTATCACTTAA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGSPSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLDLGPIEIIT

Homology

[Close]

BLAST of Sed0005507 vs. NCBI nr
Match: XP_022959765.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 295.4 bits (755), Expect = 3.4e-76
Identity = 149/188 (79.26%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ KQ      P +   G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQH-----PGFDLNGG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTGQW PE+TWVYS+E+QMEIN N++NN+HHQ CLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIHHQPCLQPLEDDHIEQMIQELLD 180

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 183

[Close]

BLAST of Sed0005507 vs. NCBI nr
Match: XP_023513557.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 9.9e-76
Identity = 152/188 (80.85%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ K QHP  DP     G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHK-QHPGFDPN----GG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTG W PE+TWVYS+E+QMEIN NN NN+H QQCLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGPWPPEETWVYSDEAQMEIN-NNDNNIHRQQCLQPLEDDHIEQMIQELLD 180

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 182

[Close]

BLAST of Sed0005507 vs. NCBI nr
Match: KAG6593370.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025719.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-75
Identity = 149/188 (79.26%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ KQQ     P +   G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQ-----PGFDLNGG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTGQW PE+TWVYS+E+QMEIN N++NN+ HQ CLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLD 180

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 183

[Close]

BLAST of Sed0005507 vs. NCBI nr
Match: XP_038899890.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 292.4 bits (747), Expect = 2.9e-75
Identity = 152/190 (80.00%), Postives = 163/190 (85.79%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ+NPN+  SSSSSS LLSAALIAKLHKCHLASLQI KKH+ K QHP      A +  
Sbjct: 61  TNFQYNPNDQHSSSSSSNLLSAALIAKLHKCHLASLQIAKKHIHK-QHP------AGFQP 120

Query: 121 PSPTTAGATTG-QWWPEDTWVYSNESQMEIN-YNNSNNVHHQQCLQPLEDDHIEQMIQEL 180
           P P+ AG TTG +W PE+TWVYS+E QME+N  NN+NN+HHQQCLQPLEDDHIEQMIQEL
Sbjct: 121 PPPSIAGPTTGRRWTPEETWVYSDEGQMEMNDNNNNNNIHHQQCLQPLEDDHIEQMIQEL 180

Query: 181 LDLGPIEIIT 189
           L LG  EIIT
Sbjct: 181 LHLGSFEIIT 183

[Close]

BLAST of Sed0005507 vs. NCBI nr
Match: XP_023004394.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 4.2e-74
Identity = 149/188 (79.26%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ K QHP  DP     G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHK-QHPGFDPN----GG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTGQW PE+TWVYS+E+QM+IN    NN+HHQ CLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGQWPPEETWVYSDEAQMKIN----NNIHHQPCLQPLEDDHIEQMIQELLD 179

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 179

[Close]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-47
Identity = 111/186 (59.68%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNF +NPN  +  +SSSKLLSA L AKLHKC++ASLQ+ K+  Q Q   ++        S
Sbjct: 61  TNFPYNPN--AIPTSSSKLLSATLTAKLHKCYMASLQMTKQ-TQTQTQTQT------ARS 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
            S  + G T  +         + E + E       N + QQ  +PLE+DHIEQMI+ELL 
Sbjct: 121 QSADSDGVTANESHLNRGVTETTEIKWE-----DGNANMQQNFRPLEEDHIEQMIEELLH 172

Query: 181 LGPIEI 187
            G IE+
Sbjct: 181 YGSIEL 172

[Close]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.9e-39
Identity = 99/179 (55.31%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNF +NPN  +S SSSSKLLSA LIAKLH+C++ASLQ+ +        PE+    A    
Sbjct: 61  TNFPYNPN--ASQSSSSKLLSATLIAKLHRCYMASLQMTR----PSSLPEAPRIIA---- 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSN------NVHHQQCLQPLEDDHIEQ 174
            SP  A    G     D  +   + + E      N       V   Q  +PLE+DHI Q
Sbjct: 121 -SPNNAVKGIG----ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-23
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPNESS---------------SSSSSSKLLSAALIAKLHKC--------HLASLQIVKKH 125
           N N +                SSS+SS  LS+ L AKL KC            L     H
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 V---QKQQHPESDPTYAAYGSPSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHH 181
           +   QK+   +SD ++       P ++   T     +D  + +  +++EI  +    +  
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDA-ILAPTTEVEIGGSREEVLDE 184

[Close]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-21
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 ------NPNESSSSSSSSKLLSAALIAKLHK 91
                N  E +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-20
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NPNESSSSS--------SSSKLLSAALIAKLHK 91
            +E  S           S K LS  L AKL K
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of Sed0005507 vs. ExPASy TrEMBL
Match: A0A6J1H793 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111460738 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.6e-76
Identity = 149/188 (79.26%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ KQ      P +   G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQH-----PGFDLNGG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTGQW PE+TWVYS+E+QMEIN N++NN+HHQ CLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIHHQPCLQPLEDDHIEQMIQELLD 180

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 183

[Close]

BLAST of Sed0005507 vs. ExPASy TrEMBL
Match: A0A6J1KW57 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111497726 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 149/188 (79.26%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNFQ N N+  S SSSS LLS ALIAKLHKCHLASLQI KKH+ K QHP  DP     G 
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHK-QHPGFDPN----GG 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
           P P+ +  TTGQW PE+TWVYS+E+QM+IN    NN+HHQ CLQPLEDDHIEQMIQELLD
Sbjct: 121 PPPSISRTTTGQWPPEETWVYSDEAQMKIN----NNIHHQPCLQPLEDDHIEQMIQELLD 179

Query: 181 LGPIEIIT 189
           LGP EIIT
Sbjct: 181 LGPFEIIT 179

[Close]

BLAST of Sed0005507 vs. ExPASy TrEMBL
Match: A0A0A0KA12 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 155/197 (78.68%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNE---SSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAA 120
           TNF +NPN+   SSS SSSSKLLSAALI KLHKCHLASLQI K+HV K QH   +P+Y A
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHK-QHAGFEPSYLA 120

Query: 121 Y-GSPSPTTAGATTGQWWPEDTWVYSNE-SQMEINYNN---SNNVHHQQC-LQPLEDDHI 180
           Y GSP P   GATT QW  ++TWVYSN+  QME+N NN   +NN+HHQQC L+PLEDDHI
Sbjct: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180

Query: 181 EQMIQELLDLGPIEIIT 189
           EQMIQELLDLG  EIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 196

[Close]

BLAST of Sed0005507 vs. ExPASy TrEMBL
Match: A0A1S3CE50 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 152/203 (74.88%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNE-----SSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTY 120
           TNF +N N+     S SSSSSSKLLSAALI KLHKCHLASLQI K+HV K QHP  +P+Y
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHK-QHPGFEPSY 120

Query: 121 AAY-GSPSPTTAGATTGQWWPEDTWVYSNESQMEI--------NYNNSNNVHHQQC-LQP 180
            AY GSP P+  GATT +W  ++TWVYS++ Q+E+        N NN+NN+HHQQC L+P
Sbjct: 121 LAYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEP 180

Query: 181 LEDDHIEQMIQELLDLGPIEIIT 189
           LEDDHIEQMIQELLDLG  EIIT
Sbjct: 181 LEDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of Sed0005507 vs. ExPASy TrEMBL
Match: A0A6J1GPQ0 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111456403 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 146/191 (76.44%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQFNPNE---SSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAA 120
           TNFQFNPN+   SSSSSSSSKLLSA L+AKLHKCHLASLQI KKH   +QHP  +P YA 
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYAV 120

Query: 121 YGSPSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQE 180
           YG PSP+ +  TT +W  E+T + +N        N++NN+HHQQCLQPLEDD IEQMIQE
Sbjct: 121 YGGPSPSISQTTTHRWRQEETQIETN--------NDNNNIHHQQCLQPLEDDDIEQMIQE 180

Query: 181 LLDLGPIEIIT 189
           LLDLG  EIIT
Sbjct: 181 LLDLGSFEIIT 183

[Close]

BLAST of Sed0005507 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 111/186 (59.68%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQFNPNESSSSSSSSKLLSAALIAKLHKCHLASLQIVKKHVQKQQHPESDPTYAAYGS 120
           TNF +NPN  +  +SSSKLLSA L AKLHKC++ASLQ+ K+  Q Q   ++        S
Sbjct: 61  TNFPYNPN--AIPTSSSKLLSATLTAKLHKCYMASLQMTKQ-TQTQTQTQT------ARS 120

Query: 121 PSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHHQQCLQPLEDDHIEQMIQELLD 180
            S  + G T  +         + E + E       N + QQ  +PLE+DHIEQMI+ELL 
Sbjct: 121 QSADSDGVTANESHLNRGVTETTEIKWE-----DGNANMQQNFRPLEEDHIEQMIEELLH 172

Query: 181 LGPIEI 187
            G IE+
Sbjct: 181 YGSIEL 172

[Close]

BLAST of Sed0005507 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPNESS---------------SSSSSSKLLSAALIAKLHKC--------HLASLQIVKKH 125
           N N +                SSS+SS  LS+ L AKL KC            L     H
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 V---QKQQHPESDPTYAAYGSPSPTTAGATTGQWWPEDTWVYSNESQMEINYNNSNNVHH 181
           +   QK+   +SD ++       P ++   T     +D  + +  +++EI  +    +  
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDA-ILAPTTEVEIGGSREEVLDE 184

[Close]

BLAST of Sed0005507 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 5.1e-22
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 ------NPNESSSSSSSSKLLSAALIAKLHK 91
                N  E +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of Sed0005507 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NPNESSSSS--------SSSKLLSAALIAKLHK 91
            +E  S           S K LS  L AKL K
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of Sed0005507 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQF 65
          +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 ------NPNESSSSSSSSKLLSAALIAKLHK 91
                N  E +S+  S K LS  L AKL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 92

The following BLAST results are available for this feature:

BLAST of Sed0005507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959765.1	3.4e-76	79.26	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_023513557.1	9.9e-76	80.85	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
KAG6593370.1	1.3e-75	79.26	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_038899890.1	2.9e-75	80.00	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_023004394.1	4.2e-74	79.26	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of Sed0005507 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	2.6e-47	59.68	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	5.9e-39	55.31	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	2.7e-23	39.80	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	7.2e-21	61.54	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.6e-20	60.22	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Sed0005507 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H793	1.6e-76	79.26	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KW57	2.0e-74	79.26	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KA12	4.5e-74	78.68	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=...	[more]
A0A1S3CE50	2.2e-73	74.88	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1GPQ0	1.1e-72	76.44	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Sed0005507 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.9e-48	59.68	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	1.9e-24	39.80	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	5.1e-22	61.54	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.1e-21	60.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.4e-19	59.34	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 2.7E-41 score: 153.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 7.7E-12 score: 45.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.73171
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..64 e-value: 1.01862E-34 score: 115.061
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 4.9E-26 score: 92.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..131
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..187
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..187
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005507.1	Sed0005507.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity