Sed0005506 (gene) Chayote v1

Overview


Name	Sed0005506
Type	gene
Organism	Sechium edule (Chayote v1)
Description	signal peptidase complex-like protein DTM1
Location	LG13: 25929643 .. 25933925 (-)
RNA-Seq Expression	Sed0005506
Synteny	Sed0005506

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAAAAAAAAAAAAAAAAAAGCACAATAACAAAATGGCTGAGCATTTAAAGAAAACAGATGAGAGAAGTCTAGAAAGGTGTAAAATAAATGCAACAATAACTAAGCAGCCACCACCAGCAAACCCTAGACCCCGCCCCACGCGATCTCCCCTCTTCTCTCCAATGGCGGTCACTTCGATTATCCTCTCATTTCTTCAGTTATTTTCATCTCCAGATCCATGGCTGAAGACGCCGCCCTCAAATTCTCTCTGCTTTTCCTTGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAAAAGATGGCCGTGACCTATCTCGTCGGCGCTTTGGCAATCGCCGGCGTCCTCCTGCCGGACTGGTGCTTCTTCGACCGCGAGTTCTCCCGGTGGACTTCTCCGGTCACCGGAGAGGAAAGGGAATCGTATCGGATCTCGACTGGGTCTCGGTTTTCAAGGTCGGTTACTTTTTGTTTATTCTCTACCTGCTCTGTTTCTCTTGTTTGATTGATGCCACAGGAAAAATTGGGCCAGATAATTATTAGCTTCTTTTATTTAATTAATTTGGTAATCCTGTTAATTGAAAATTTGAAATACTCTGCCCCCGGAAGGTATGCTTTGTGTTTAGATGTGGAATTGTAGATTGATTATTAATGAAAGGTTGTTTTAAATTATTAGAAATTTGAATGTTAGTAACATATTGTTTCTATATGATTATTTGTAGAGGGGGATATGTTGCGATGATAGTTTTTGTTTGCATACTTTGTGGTTAGATAGATATAAGTGATTATTTTGAAGATTTAGAAATAGCATTTAATTAGACGAATTATTAGAATGAGTAATTAGATAGAAATTAATTATCATTTTGAAGATCTAGAAATGAAATGAGTGTTCTAAATTGCCTTTATACAGTATTATGATGTATCTATCATATCTTTGAAGTGGAAGAACTTTTTGTAAGAACTCTTTCAAGTCTCTTTTTTTAGATAGAACTCTCTCTCTTTTTGTTGGGTACGTAGTTTAAAAATAATTCATATATAGTATATAATTTTTATCAGTGTTAGAACTTAGACGGTGATAGATTTAGTCTAGTCTATTACTAATTGAACTTAGTCTATTACTAATTGAACTTTATCGCTTATTGGATTCTATCGATGATATTTGAATTTACTGTTACATTACTCATGAATTAGTTTTGATTTTGTACTAAATATGCAAATACTTTACCATTTTTTATTATACATGCAAAATCTTGTTAATAGTAGTATAAAAAAAATAATTTTTATTTTAAGTGTTAGAAACGAGTTGATTATTTTAAGTGGTTAAAAAAAAGATTTGATTTAAAATGAGTGATCGGAAATAAGTGATTATTATAGCTTGTATGGATATGATTGTTTGAAGAATTATACAAATTCATTTGTAATAGGTTGTTAATTACATCAAACAAAAACTCTCTAAAGTCTTAAATTCGAAACTTATTTGTGTTGTGTTTTCATTACTCTAATGTATTCTTAGTGTCACAAATCACAAATTAGTCTCACAAATTATAGACGGCTATATGCGAGCTATGCTTCACCATAAAAAATAAATTAATTAAAAAAAAACGAATTAAATACTGTTTGTTTATTAAAATGGAGTTCTCGAAATTTTGATTTTGTGTTTTTGGAAACTTTTGCAGGTTTAGGATTTATCCAATCAGAGTGGTTTTGTACGCCACAGTTTATAGTGTTGCTCTGTACAAGTGGTGGAAATTCGTTTCTAGCTAAATCCTTCTCTTCAAATGTGGTCGCTGGATTTCAACTTTCAATTTCATCCTACTGAAACTCAAAATTGTATAAGTGCTGTATAAGTAGAAAAGTTATTATCATTTTTTCGATCTGATAATCTTTGTTTAAAAGGATTTGAAAATTTAATACTTACAAAATTTTGATTCAGTTTATCAAAACTCATTTTCGGTTAGGAAAAAAACTCATTTACTATTGAAATTATGAGTTTTGGTAGATATTTTTCTCCTTGTAGGCAGTGAATGAGCCAAACTAAGATCGAGTTTGATAACTAATTTTTTATTTTTGAAATTTAAATTTATTTTTCACTTTATTTTTCTATCAAAAGATTTCACCTTCGTTTAGAGAAGAATGCGGATCTTCACTAATTTCAAACACCACCTTTAAAACATAAGTAGAAAATTATATGAGTAGTGGATGCAGCCTTAATTTTAAAAATTTATGAGTAAAAACATTCTCTTTTTTTATTTTTTTATAATAAATCTTTGCGCACTGTTCTATGACACTTGAAAAACTTGTATTTTGGTTTTCCTATTCTTTCAACTATGAGTATCCTCTCTGCTATCTCTATTAAAGTTTGTATCATAGCATTGTTTGGCAAACCGTATGACAAAGAAGGCTCAATAATTTGCTAGGAATAGTTTGTCGTCTGCCTCTATGATTGCTTCCCAGGTTTCTCCTTTGTCCAATACCAGGGTCATCAATTCATCGTTTGGACACCCACCCACTCACTATTTTTCTCTCTGTCAAGTTGGACAAGAATACTTATCTCTTGTGGCATAGTATGGTGTTAGCTATACTGGTCATAAGGTCGATTGTTATTGTTAGAGTTATATGTATAATATGTATCTTGAATAGTTTACTACTTTCCAAGATTTAGGTTCATTAGGGTTATTATGTACTCTATATAAAGGCAATGCCTCTTCTAATAAGATATTGCAATGACTGCTTTAGTCATAATTCTCGATTACATGATATTAGAGCTAAAACCATACAACCAAAGTTCGGGTTTTTGGGAATTGTTAGGAGTCGTCGCCGTCGTCATTGTATGAGTTGGGTGTCACCACCTAAAGATTATGAAGCCTAGCCCCCGATCTATCCAGTCGTTCAAGTCGAGACTTCCTGCACGCACCGTCGCAAGGGTCTGCCAGTCGCCATCTTTCGCTGTGCGTGGCGGTGCTTTCCGCCTCCGACCCGGATGGGTCTTCTTAGGTTTTGTGCTCGTCGAAGGGTACTCCACGTGTGTCAAGTTTTTTTTTTTAGGCTTTGGACATCAGGGTTCTTCGGATTTGACATTTACGATTATTGTTAGTATCGTCTCTACAACTGCATGATACTGTTATGCTTTTTTTGTGAAATATCACATTACTTGTTGCCCATTTTAATTAAATCAAGATATGGCTGAAAATAAGCATACCAGTGTAATCTTTTATTTTGTGAAAATTATGAAGCACAAGTTGAATGGTTTGAATTACCTAGATTGGAGTAGGACGATTAGGAATCATTTACTGAGTAATGAGATTGAAAGTTATAGTGACAGAAAGCCACCTATGGATAAGGCAGAAAAGAAGCGTTGGGATCATGATGATGCACGTCTATACTACCAGATCACGAACTCCATGAATGATGAGATCGTGGACCTGGTGAGCCATTATTCTATTGTAAAAGAACTCATGAAGTTCGTGAAATTTTTGTATTTTAGAAAGGAACAAGTCACGAAGACTTACGACGTGTGCACATCTTATTTCCATGCAGATCGTAATGGGGAGTCCCTGATGACTTATTACACTAGGCACAAAAAGAATGGCGCTAGAACTCTCTAATGCTCTTTAGCGTTGATATTGCAGTACAATAGGCTCAGAGAGAAAAGATGTGGGTTATTAACTTTTTGAAGGGTCTTGGACCAGAATATGAAGTTGCAAGTCTCAGATCTTATCTAGAACTGAGCTTCCAACCTTGGATGATGTGTTCAAAAGACTTCAACGCACCAAAAGGACTTCTACAGAAGTGTCAGACATATTGTCGAATAGTACCCTGATTGGAAGGAATAACTCACGGGGTGGGAGGAATATGAATACTTCTTGAAATCTGGTTGTGATCGACGTCGAGATCCAGGTGGTCAAAGTCGACGTCTAGAAACTCGAGGAGAAGTGACCTGTTATTATTGCCATAAATAACCAGGGCATATCAAGAAAGATTGCAAGAAGTTATAGTATCATAATCAAAGGCTTCAGACAACCCAACTTGCATCCAATGACACAGTTATGACTGGTGAGTTTGCTAAACTCCAGGTTTCCAACATGTCATCGCAGTCATCATCTTCAAAACCTCCGCATGCTGCTACCCTGGCTGAATCAGGTAACAATCATTGTCTTCTTTCGTATTCTATGAAGTGGGTCGTAGACTCTAGAGCCACTATTCATATGACAGGTATTATTAACTTATTTTCTACTTCGTTGTCATCTGTATGCTTCCCTACTGTCACTTTGGCC

mRNA sequence

AATTAAAAAAAAAAAAAAAAAAGCACAATAACAAAATGGCTGAGCATTTAAAGAAAACAGATGAGAGAAGTCTAGAAAGGTGTAAAATAAATGCAACAATAACTAAGCAGCCACCACCAGCAAACCCTAGACCCCGCCCCACGCGATCTCCCCTCTTCTCTCCAATGGCGGTCACTTCGATTATCCTCTCATTTCTTCAGTTATTTTCATCTCCAGATCCATGGCTGAAGACGCCGCCCTCAAATTCTCTCTGCTTTTCCTTGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAAAAGATGGCCGTGACCTATCTCGTCGGCGCTTTGGCAATCGCCGGCGTCCTCCTGCCGGACTGGTGCTTCTTCGACCGCGAGTTCTCCCGGTGGACTTCTCCGGTCACCGGAGAGGAAAGGGAATCGTATCGGATCTCGACTGGGTCTCGGTTTTCAAGGTTTAGGATTTATCCAATCAGAGTGGTTTTGTACGCCACAGTTTATAGTGTTGCTCTGTACAAGTGGTGGAAATTCGTTTCTAGCTAAATCCTTCTCTTCAAATGTGGTCGCTGGATTTCAACTTTCAATTTCATCCTACTGAAACTCAAAATTGTATAAGTGCTGTATAAGTAGAAAAGTTATTATCATTTTTTCGATCTGATAATCTTTGTTTAAAAGGATTTGAAAATTTAATACTTACAAAATTTTGATTCAGTTTATCAAAACTCATTTTCGGTTAGGAAAAAAACTCATTTACTATTGAAATTATGAGTTTTGGTAGATATTTTTCTCCTTGTAGGCAGTGAATGAGCCAAACTAAGATCGAGTTTGATAACTAATTTTTTATTTTTGAAATTTAAATTTATTTTTCACTTTATTTTTCTATCAAAAGATTTCACCTTCGTTTAGAGAAGAATGCGGATCTTCACTAATTTCAAACACCACCTTTAAAACATAAGTAGAAAATTATATGAGTAGTGGATGCAGCCTTAATTTTAAAAATTTATGAGTAAAAACATTCTCTTTTTTTATTTTTTTATAATAAATCTTTGCGCACTGTTCTATGACACTTGAAAAACTTGTATTTTGGTTTTCCTATTCTTTCAACTATGAGTATCCTCTCTGCTATCTCTATTAAAGTTTGTATCATAGCATTGTTTGGCAAACCGTATGACAAAGAAGGCTCAATAATTTGCTAGGAATAGTTTGTCGTCTGCCTCTATGATTGCTTCCCAGGTTTCTCCTTTGTCCAATACCAGGGTCATCAATTCATCGTTTGGACACCCACCCACTCACTATTTTTCTCTCTGTCAAGTTGGACAAGAATACTTATCTCTTGTGGCATAGTATGGTGTTAGCTATACTGGTCATAAGGTCGATTGTTATTGTTAGAGTTATATGTATAATATGTATCTTGAATAGTTTACTACTTTCCAAGATTTAGGTTCATTAGGGTTATTATGTACTCTATATAAAGGCAATGCCTCTTCTAATAAGATATTGCAATGACTGCTTTAGTCATAATTCTCGATTACATGATATTAGAGCTAAAACCATACAACCAAAGTTCGGGTTTTTGGGAATTGTTAGGAGTCGTCGCCGTCGTCATTGTATGAGTTGGGTGTCACCACCTAAAGATTATGAAGCCTAGCCCCCGATCTATCCAGTCGTTCAAGTCGAGACTTCCTGCACGCACCGTCGCAAGGGTCTGCCAGTCGCCATCTTTCGCTGTGCGTGGCGGTGCTTTCCGCCTCCGACCCGGATGGGTCTTCTTAGGTTTTGTGCTCGTCGAAGGGTACTCCACGTGTGTCAAGTTTTTTTTTTTAGGCTTTGGACATCAGGGTTCTTCGGATTTGACATTTACGATTATTGTTAGTATCGTCTCTACAACTGCATGATACTGTTATGCTTTTTTTGTGAAATATCACATTACTTGTTGCCCATTTTAATTAAATCAAGATATGGCTGAAAATAAGCATACCAGTGTAATCTTTTATTTTGTGAAAATTATGAAGCACAAGTTGAATGGTTTGAATTACCTAGATTGGAGTAGGACGATTAGGAATCATTTACTGAGTAATGAGATTGAAAGTTATAGTGACAGAAAGCCACCTATGGATAAGGCAGAAAAGAAGCGTTGGGATCATGATGATGCACGTCTATACTACCAGATCACGAACTCCATGAATGATGAGATCGTGGACCTGATCGTAATGGGGAGTCCCTGATGACTTATTACACTAGGCACAAAAAGAATGGCGCTAGAACTCTCTAATGCTCTTTAGCGTTGATATTGCAGTACAATAGGCTCAGAGAGAAAAGATGTGGGTTATTAACTTTTTGAAGGGTCTTGGACCAGAATATGAAGTTGCAAGTCTCAGATCTTATCTAGAACTGAGCTTCCAACCTTGGATGATGTGTTCAAAAGACTTCAACGCACCAAAAGGACTTCTACAGAAGTGTCAGACATATTGTCGAATAGTACCCTGATTGGAAGGAATAACTCACGGGGTGGGAGGAATATGAATACTTCTTGAAATCTGGTTGTGATCGACGTCGAGATCCAGGTGGTCAAAGTCGACGTCTAGAAACTCGAGGAGAAGTGACCTGTTATTATTGCCATAAATAACCAGGGCATATCAAGAAAGATTGCAAGAAGTTATAGTATCATAATCAAAGGCTTCAGACAACCCAACTTGCATCCAATGACACAGTTATGACTGGTGAGTTTGCTAAACTCCAGGTTTCCAACATGTCATCGCAGTCATCATCTTCAAAACCTCCGCATGCTGCTACCCTGGCTGAATCAGGTAACAATCATTGTCTTCTTTCGTATTCTATGAAGTGGGTCGTAGACTCTAGAGCCACTATTCATATGACAGGTATTATTAACTTATTTTCTACTTCGTTGTCATCTGTATGCTTCCCTACTGTCACTTTGGCC

Coding sequence (CDS)

ATGGCTGAAGACGCCGCCCTCAAATTCTCTCTGCTTTTCCTTGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAAAAGATGGCCGTGACCTATCTCGTCGGCGCTTTGGCAATCGCCGGCGTCCTCCTGCCGGACTGGTGCTTCTTCGACCGCGAGTTCTCCCGGTGGACTTCTCCGGTCACCGGAGAGGAAAGGGAATCGTATCGGATCTCGACTGGGTCTCGGTTTTCAAGGTTTAGGATTTATCCAATCAGAGTGGTTTTGTACGCCACAGTTTATAGTGTTGCTCTGTACAAGTGGTGGAAATTCGTTTCTAGCTAA

Protein sequence

MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRWTSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS

Homology

[Close]

BLAST of Sed0005506 vs. NCBI nr
Match: XP_022940831.1 (signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAAAVVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR FSRW
Sbjct: 1   MAEDAALKSSLVFLAAAVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRNFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+V+YA VYSVALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLVVYAIVYSVALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. NCBI nr
Match: KAG7037595.1 (Signal peptidase complex-like protein DTM1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.0 bits (476), Expect = 4.5e-44
Identity = 94/110 (85.45%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAAAVVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR+FSRW
Sbjct: 1   MAEDAALKSSLVFLAAAVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+ +YA VYSVALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLAVYAIVYSVALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. NCBI nr
Match: KAG6608241.1 (Signal peptidase complex-like protein DTM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44
Identity = 94/110 (85.45%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAAAVVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR FSRW
Sbjct: 1   MAEDAALKSSLVFLAAAVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRNFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+ +YA VYSVALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLAVYAIVYSVALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. NCBI nr
Match: XP_022981833.1 (signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44
Identity = 93/110 (84.55%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAA VVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR+FSRW
Sbjct: 1   MAEDAALKSSLVFLAATVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+ +YATVYS ALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLAVYATVYSAALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. NCBI nr
Match: XP_038899258.1 (signal peptidase complex-like protein DTM1 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MA DAAL  SL+FLAA VVLVGI+T+SFKKM VTY VGA AIAGVLLPDWCFFDR+FSRW
Sbjct: 1   MANDAALNSSLVFLAAVVVLVGITTYSFKKMVVTYFVGAFAIAGVLLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
           TSPVT EERESYRISTGSRF RFRIYPIR+V+Y TVYSVALYKWW++VSS
Sbjct: 61  TSPVTEEERESYRISTGSRFRRFRIYPIRLVVYGTVYSVALYKWWQYVSS 110

[Close]

BLAST of Sed0005506 vs. ExPASy Swiss-Prot
Match: Q7XI45 (Signal peptidase complex-like protein DTM1 OS=Oryza sativa subsp. japonica OX=39947 GN=DTM1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-21
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           M  D  L+ SL+ LAAAVV+ G+ T S +K A TY  G LAIAGVLLPDW FFDR++S+W
Sbjct: 1   MGRDEMLRRSLVALAAAVVVTGVVTASVRKAAATYGFGILAIAGVLLPDWEFFDRDYSQW 60

Query: 61  TSPVTGEERESYRISTGSRFS--RFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            +P+    R +   +        +F+ YP+R+ +  T+Y   LYKWW +VSS
Sbjct: 61  LTPMPASRRTAAEAAADREHDVWKFKPYPLRMAMLTTIYGFGLYKWWMYVSS 112

[Close]

BLAST of Sed0005506 vs. ExPASy TrEMBL
Match: A0A6J1FJI2 (signal peptidase complex-like protein DTM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446307 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAAAVVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR FSRW
Sbjct: 1   MAEDAALKSSLVFLAAAVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRNFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+V+YA VYSVALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLVVYAIVYSVALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. ExPASy TrEMBL
Match: A0A6J1J358 (signal peptidase complex-like protein DTM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480862 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-44
Identity = 93/110 (84.55%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAA VVLVGISTHSFKKMAVTYLVG  AIAG+LLPDWCFFDR+FSRW
Sbjct: 1   MAEDAALKSSLVFLAATVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
            SPVT EERESYRIST SR  RFRIYPIR+ +YATVYS ALYKWWKFVS+
Sbjct: 61  ISPVTEEERESYRISTASRNPRFRIYPIRLAVYATVYSAALYKWWKFVST 110

[Close]

BLAST of Sed0005506 vs. ExPASy TrEMBL
Match: A0A6J1DGG6 (signal peptidase complex-like protein DTM1 OS=Momordica charantia OX=3673 GN=LOC111020250 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.9e-42
Identity = 88/110 (80.00%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MAEDAALK SL+FLAA VV+VGI+THSF  MAVTYLVG  AIAGVLLPDWCFFDR+FSRW
Sbjct: 1   MAEDAALKSSLVFLAAVVVVVGIATHSFTNMAVTYLVGVFAIAGVLLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
           TSPVT EERES RISTGS+  RFRIYPIR+++Y  VYS ALYKWWKF+SS
Sbjct: 61  TSPVTAEERESDRISTGSQLRRFRIYPIRLIVYTIVYSFALYKWWKFISS 110

[Close]

BLAST of Sed0005506 vs. ExPASy TrEMBL
Match: A0A5A7TAS9 (Signal peptidase complex-like protein DTM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006230 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MA DAAL  SL+ LA A+VLVGI+T+SFKKMAVTY VG  AIAGVLLPDWCFFDR+FSRW
Sbjct: 1   MANDAALNSSLVILALAIVLVGITTYSFKKMAVTYFVGVFAIAGVLLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
           TSPVT EERESYR +TGS+  RFRIYP+RV++Y  VYS+ALYKWW++V+S
Sbjct: 61  TSPVTEEERESYRNATGSQLQRFRIYPMRVIVYGIVYSIALYKWWQYVTS 110

[Close]

BLAST of Sed0005506 vs. ExPASy TrEMBL
Match: A0A1S3CQR6 (uncharacterized protein LOC103503709 OS=Cucumis melo OX=3656 GN=LOC103503709 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           MA DAAL  SL+ LA A+VLVGI+T+SFKKMAVTY VG  AIAGVLLPDWCFFDR+FSRW
Sbjct: 1   MANDAALNSSLVILALAIVLVGITTYSFKKMAVTYFVGVFAIAGVLLPDWCFFDRDFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
           TSPVT EERESYR +TGS+  RFRIYP+RV++Y  VYS+ALYKWW++V+S
Sbjct: 61  TSPVTEEERESYRNATGSQLQRFRIYPMRVIVYGIVYSIALYKWWQYVTS 110

[Close]

BLAST of Sed0005506 vs. TAIR 10
Match: AT1G34640.1 (peptidases )

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-27
Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 1   MAEDAALKFSLLFLAAAVVLVGISTHSFKKMAVTYLVGALAIAGVLLPDWCFFDREFSRW 60
           M  +AAL+ S++ LA  +V+V + T S KK  VTY VG   I G+LLPDW FFDR FSRW
Sbjct: 1   MGNEAALRSSMVGLAVVMVVVWLWTQSLKKTVVTYAVGISLIGGILLPDWDFFDRSFSRW 60

Query: 61  TSPVTGEERESYRISTGSRFSRFRIYPIRVVLYATVYSVALYKWWKFVSS 111
             PVT EER S  ++  S  SRFR+YP+R+VLY TVY  A+Y+WW FVS+
Sbjct: 61  GYPVTAEER-SAALARKSHPSRFRVYPMRMVLYGTVYGYAVYRWWMFVSN 109

The following BLAST results are available for this feature:

BLAST of Sed0005506 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940831.1	2.6e-44	86.36	signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita moschata]	[more]
KAG7037595.1	4.5e-44	85.45	Signal peptidase complex-like protein DTM1 [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6608241.1	7.6e-44	85.45	Signal peptidase complex-like protein DTM1, partial [Cucurbita argyrosperma subs...	[more]
XP_022981833.1	7.6e-44	84.55	signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita maxima]	[more]
XP_038899258.1	1.0e-43	83.64	signal peptidase complex-like protein DTM1 [Benincasa hispida]	[more]

BLAST of Sed0005506 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XI45	2.5e-21	46.43	Signal peptidase complex-like protein DTM1 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Sed0005506 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJI2	1.3e-44	86.36	signal peptidase complex-like protein DTM1 isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1J358	3.7e-44	84.55	signal peptidase complex-like protein DTM1 isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1DGG6	5.9e-42	80.00	signal peptidase complex-like protein DTM1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7TAS9	1.2e-39	74.55	Signal peptidase complex-like protein DTM1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQR6	1.2e-39	74.55	uncharacterized protein LOC103503709 OS=Cucumis melo OX=3656 GN=LOC103503709 PE=...	[more]

BLAST of Sed0005506 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34640.1	3.1e-27	55.45	peptidases	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009542	Signal peptidase complex subunit Spc1/SPCS1	PFAM	PF06645	SPC12	coord: 8..63 e-value: 4.6E-7 score: 29.8
IPR039955	Signal peptidase complex-like protein DTM1	PANTHER	PTHR38354	SIGNAL PEPTIDASE COMPLEX-LIKE PROTEIN DTM1	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005506.1	Sed0005506.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048658	anther wall tapetum development
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
cellular_component	GO:0005789	endoplasmic reticulum membrane