Sed0005504 (gene) Chayote v1

Overview
NameSed0005504
Typegene
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial transcription termination factor family protein
LocationLG01: 63735004 .. 63736962 (+)
RNA-Seq ExpressionSed0005504
SyntenySed0005504
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAATTGATTCAATCGTACCTAATCTAAACCATGTATATTACTCCCAAATAATGAAATAAACTGCCTAGCGGCCACCCACTTTTTCCATAAATAGAGTTCTTTGGGCAACACAAAAAGAATGGAAAGATATTTAAAATATTCCAAGTATTTTAAATGGTGCGAAAAGGTAAAGTAGTAAAAAAAAAAAAACAAACAAACAAACGAATTAATTTGGTTGATGTTCGCGTTTTCCATAATCCAGTCCGATCAAAGCCCTAGGCCGAGCCTCAACCCCACCTCCGCCACCATAACCTAATTCGCCGACCTCCACCGCCGCCGATGGGATTTCGATTGTTCTGCGCGATGCTTTTTGTGCAACGATCCATGGCAGATTTGCAGTGAATCACTCAAAATGATCAGAATTTTAGGGCTCAAAATCTCAAGAAGTTCCGTTACGAGACTTGCAGTCGCCACCTCTTCATTCGACAATCTAGGGTTAGGGTTTCAACAGCGTACCTTCAAATTCTTCTCAGTTCTTGCCAATAACCCGTCCGTTCGACATTTGGAAGATGAGCGTATAAATTCTTTCTCTGTTTCATACCTCGTCAATTCATGCGGATTTCCATTAGAGACTGCTCTGGATGTGGCTTCCAAGGTAAAATTCAAAACCCCCAAAAACCCTGATTCTGTTCTTACCCTTCTCCAAACCCAAGGATTCACCAATACTCAGATTACTAATATTGTCAAGCAATTCCCGAGTTTGCTGTTTAGTAAATCTGATAAATTACTTTTGCCCAAATTGGAATATCTGCATTCACTCGGGCTTTCCCAGTCAGAGTGTGTTCAGATTATACATTCATGTCCGTTTCTTCTGGGGAGAAGCTTGAAAAAGCATATAGTTCCATGTTACCAATTCCTTAAATCTGTGCTTGTTGAAGATGAAAAGGTCCTTAGATGTTTGAAGCGTTCGCCCCGGGCATTTCTTCGAAATCTGCAGGTCAATATCGTACCCAACATCGCACTGTTACGAAAGTGTGCAGTTTCTGAAGTTTGTATTTCGTTTTATGTTACCAATTTTCCGGAATCAGCATTCTCTAAGCATTCTAAATTCTGCAGCTTTGTTAACCAAGTTAAGGAGATGGGATTTGACCCTTTAAAACATGTGTTTGTTATGGCTATTAGTGTGCTCTCTAAGATGACTCCTTTCACCTTGGAAAGGAAATTTAAAGCTTTCAGGAAGTGTGGTTGGTCAAAGGATCAGACTCTTTTAGCTTTTAAAAGGTTTCCACAAAGTTTTTTGCTGTCTGAGAAGAATATATTTAAGACTATGGACTTTTTTGTTCACAAAATGGGGATCAAGCCAGAGGATATTGCTGCAAATCCCACTGTGCTGTGCTATAGTTTGGAGAAGAGGATAATTCCAAGGTGTTCTGTTGTTCAAAGTCTTTATGAAAAAGGTTTATTAAAGAAAGAATTGAGCATTTTTAGTATCTTACATCCTACTGAAAATATTTTCTTGAAGAGGTATGTGACCAAGTTTCCTAACGATGTTACTTCGCTGTTACATTTGTATAATGGAGAGGTCAAAGGCTTTGATGTTTAACCTTAACCTCCTTTTTGGTCATTGATTCATGCATTGTTATAGTCACTTTACCAAGCTGAATTCTAAGTTGTTGGCTTAATGTTAGCTTTTTGGTATCTGTTTAAATGAAGCCTTTTGACTTGTGGATTATTGTTTCTCAATGGTACTTCATTGCTATGTTCAAATTCCTGTAAATATGTTGTTTGGTTGATTATTCCCTACTTCTTTACACCATTACTTCAGTTCTTAGGATTTGATTTTGTGTTCAAACTTCATGTTGATTTACCATTTTTGGAACAATTTGGGAAATCGTTTTTGAATTCTTTATCAAAACTTTAAAAAAACTCAAAATGATAATTACAGATGAAACCACAGAAAGCAACAGAAAGCAAAC

mRNA sequence

CAAAAAATTGATTCAATCGTACCTAATCTAAACCATGTATATTACTCCCAAATAATGAAATAAACTGCCTAGCGGCCACCCACTTTTTCCATAAATAGAGTTCTTTGGGCAACACAAAAAGAATGGAAAGATATTTAAAATATTCCAAGTATTTTAAATGGTGCGAAAAGGTAAAGTAGTAAAAAAAAAAAAACAAACAAACAAACGAATTAATTTGGTTGATGTTCGCGTTTTCCATAATCCAGTCCGATCAAAGCCCTAGGCCGAGCCTCAACCCCACCTCCGCCACCATAACCTAATTCGCCGACCTCCACCGCCGCCGATGGGATTTCGATTGTTCTGCGCGATGCTTTTTGTGCAACGATCCATGGCAGATTTGCAGTGAATCACTCAAAATGATCAGAATTTTAGGGCTCAAAATCTCAAGAAGTTCCGTTACGAGACTTGCAGTCGCCACCTCTTCATTCGACAATCTAGGGTTAGGGTTTCAACAGCGTACCTTCAAATTCTTCTCAGTTCTTGCCAATAACCCGTCCGTTCGACATTTGGAAGATGAGCGTATAAATTCTTTCTCTGTTTCATACCTCGTCAATTCATGCGGATTTCCATTAGAGACTGCTCTGGATGTGGCTTCCAAGGTAAAATTCAAAACCCCCAAAAACCCTGATTCTGTTCTTACCCTTCTCCAAACCCAAGGATTCACCAATACTCAGATTACTAATATTGTCAAGCAATTCCCGAGTTTGCTGTTTAGTAAATCTGATAAATTACTTTTGCCCAAATTGGAATATCTGCATTCACTCGGGCTTTCCCAGTCAGAGTGTGTTCAGATTATACATTCATGTCCGTTTCTTCTGGGGAGAAGCTTGAAAAAGCATATAGTTCCATGTTACCAATTCCTTAAATCTGTGCTTGTTGAAGATGAAAAGGTCCTTAGATGTTTGAAGCGTTCGCCCCGGGCATTTCTTCGAAATCTGCAGGTCAATATCGTACCCAACATCGCACTGTTACGAAAGTGTGCAGTTTCTGAAGTTTGTATTTCGTTTTATGTTACCAATTTTCCGGAATCAGCATTCTCTAAGCATTCTAAATTCTGCAGCTTTGTTAACCAAGTTAAGGAGATGGGATTTGACCCTTTAAAACATGTGTTTGTTATGGCTATTAGTGTGCTCTCTAAGATGACTCCTTTCACCTTGGAAAGGAAATTTAAAGCTTTCAGGAAGTGTGGTTGGTCAAAGGATCAGACTCTTTTAGCTTTTAAAAGGTTTCCACAAAGTTTTTTGCTGTCTGAGAAGAATATATTTAAGACTATGGACTTTTTTGTTCACAAAATGGGGATCAAGCCAGAGGATATTGCTGCAAATCCCACTGTGCTGTGCTATAGTTTGGAGAAGAGGATAATTCCAAGGTGTTCTGTTGTTCAAAGTCTTTATGAAAAAGGTTTATTAAAGAAAGAATTGAGCATTTTTAGTATCTTACATCCTACTGAAAATATTTTCTTGAAGAGGTATGTGACCAAGTTTCCTAACGATGTTACTTCGCTGTTACATTTGTATAATGGAGAGGTCAAAGGCTTTGATGTTTAACCTTAACCTCCTTTTTGGTCATTGATTCATGCATTGTTATAGTCACTTTACCAAGCTGAATTCTAAGTTGTTGGCTTAATGTTAGCTTTTTGGTATCTGTTTAAATGAAGCCTTTTGACTTGTGGATTATTGTTTCTCAATGGTACTTCATTGCTATGTTCAAATTCCTGTAAATATGTTGTTTGGTTGATTATTCCCTACTTCTTTACACCATTACTTCAGTTCTTAGGATTTGATTTTGTGTTCAAACTTCATGTTGATTTACCATTTTTGGAACAATTTGGGAAATCGTTTTTGAATTCTTTATCAAAACTTTAAAAAAACTCAAAATGATAATTACAGATGAAACCACAGAAAGCAACAGAAAGCAAAC

Coding sequence (CDS)

ATGATCAGAATTTTAGGGCTCAAAATCTCAAGAAGTTCCGTTACGAGACTTGCAGTCGCCACCTCTTCATTCGACAATCTAGGGTTAGGGTTTCAACAGCGTACCTTCAAATTCTTCTCAGTTCTTGCCAATAACCCGTCCGTTCGACATTTGGAAGATGAGCGTATAAATTCTTTCTCTGTTTCATACCTCGTCAATTCATGCGGATTTCCATTAGAGACTGCTCTGGATGTGGCTTCCAAGGTAAAATTCAAAACCCCCAAAAACCCTGATTCTGTTCTTACCCTTCTCCAAACCCAAGGATTCACCAATACTCAGATTACTAATATTGTCAAGCAATTCCCGAGTTTGCTGTTTAGTAAATCTGATAAATTACTTTTGCCCAAATTGGAATATCTGCATTCACTCGGGCTTTCCCAGTCAGAGTGTGTTCAGATTATACATTCATGTCCGTTTCTTCTGGGGAGAAGCTTGAAAAAGCATATAGTTCCATGTTACCAATTCCTTAAATCTGTGCTTGTTGAAGATGAAAAGGTCCTTAGATGTTTGAAGCGTTCGCCCCGGGCATTTCTTCGAAATCTGCAGGTCAATATCGTACCCAACATCGCACTGTTACGAAAGTGTGCAGTTTCTGAAGTTTGTATTTCGTTTTATGTTACCAATTTTCCGGAATCAGCATTCTCTAAGCATTCTAAATTCTGCAGCTTTGTTAACCAAGTTAAGGAGATGGGATTTGACCCTTTAAAACATGTGTTTGTTATGGCTATTAGTGTGCTCTCTAAGATGACTCCTTTCACCTTGGAAAGGAAATTTAAAGCTTTCAGGAAGTGTGGTTGGTCAAAGGATCAGACTCTTTTAGCTTTTAAAAGGTTTCCACAAAGTTTTTTGCTGTCTGAGAAGAATATATTTAAGACTATGGACTTTTTTGTTCACAAAATGGGGATCAAGCCAGAGGATATTGCTGCAAATCCCACTGTGCTGTGCTATAGTTTGGAGAAGAGGATAATTCCAAGGTGTTCTGTTGTTCAAAGTCTTTATGAAAAAGGTTTATTAAAGAAAGAATTGAGCATTTTTAGTATCTTACATCCTACTGAAAATATTTTCTTGAAGAGGTATGTGACCAAGTTTCCTAACGATGTTACTTCGCTGTTACATTTGTATAATGGAGAGGTCAAAGGCTTTGATGTTTAA

Protein sequence

MIRILGLKISRSSVTRLAVATSSFDNLGLGFQQRTFKFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFDV
Homology
[Close]
BLAST of Sed0005504 vs. NCBI nr
Match: XP_022156115.1 (uncharacterized protein LOC111023077 [Momordica charantia])

HSP 1 Score: 508.4 bits (1308), Expect = 5.4e-140
Identity = 264/395 (66.84%), Postives = 307/395 (77.72%), Query Frame = 0 

Query: 1   MIRILGLKISRSSVTRLAVATSSFDNLGLGFQQRTFKFFSVLANNPSVRHLEDERINSFS 60
           M RILGLKI   S  R+AVATS F+NLG    QR  KFFSVLA+  S          S  
Sbjct: 1   MFRILGLKIFSPSSRRIAVATSFFNNLGF---QRDDKFFSVLADKGSFE-------RSSI 60

Query: 61  VSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFS 120
           V YLVNSCG   ETALDVA+KV FKTP  PD VL+LL++QG T TQI+ ++K FPSLLF 
Sbjct: 61  VLYLVNSCGMASETALDVAAKVNFKTPSEPDLVLSLLRSQGLTKTQISKVIKIFPSLLFF 120

Query: 121 KSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVL 180
            SD+ LLPK E+LHS+GLS+SEC  I++SCPFLLG SLK H++PCY +LKSVLVEDEKVL
Sbjct: 121 NSDRTLLPKFEFLHSIGLSKSECAVIVYSCPFLLGSSLKNHLIPCYNYLKSVLVEDEKVL 180

Query: 181 RCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQV 240
           +CLKRSPRAF ++L+  I PNIA LR   VSEV IS+ V+NFP+SAF  HSKFC+ VN+V
Sbjct: 181 KCLKRSPRAFRQDLRGKIAPNIAFLRTSGVSEVAISYLVSNFPDSAFLNHSKFCNIVNRV 240

Query: 241 KEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEK 300
           +++G DP K VFV AI VLS MT  T ERKF+A+RKCGWSKDQTLLAFK++P   +LSE+
Sbjct: 241 RDLGSDPSKIVFVEAIRVLSGMTSLTWERKFEAYRKCGWSKDQTLLAFKKYPPCLILSEE 300

Query: 301 NIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSI 360
            IFKTM+FFV KMG+KPEDIA  PTV+ +SLEKRIIPRCSVVQSLY KGLLKKEL I SI
Sbjct: 301 KIFKTMEFFVQKMGLKPEDIATRPTVMVFSLEKRIIPRCSVVQSLYSKGLLKKELIITSI 360

Query: 361 LHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFD 396
           LHPTE  FL++YVTKFP DV  LLHLY GEVK FD
Sbjct: 361 LHPTEKTFLEKYVTKFPKDVAWLLHLYTGEVKVFD 385

[Close]
BLAST of Sed0005504 vs. NCBI nr
Match: KAG7035624.1 (Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.9 bits (1008), Expect = 3.3e-105
Identity = 218/359 (60.72%), Postives = 249/359 (69.36%), Query Frame = 0 

Query: 39  FSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQ 98
           FSVL +N S   L+DE I+SF+VSYLVNSCG PL+TALDVASKVKFKTPKNPD VL+LL+
Sbjct: 24  FSVLPSNASFGSLKDECIHSFTVSYLVNSCGMPLQTALDVASKVKFKTPKNPDIVLSLLR 83

Query: 99  TQGFTNTQITNIVKQFPSLL-FSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRS 158
           TQGFT + I+ IVKQFP LL FS   +L  P L +   LG                    
Sbjct: 84  TQGFTKSPISKIVKQFPRLLFFSTLIELFCPNLNFCIPLG-------------------- 143

Query: 159 LKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISF 218
                             +EKV++CLKRSPRAF +     I PNI LLR   VS+V IS 
Sbjct: 144 ----------------SPNEKVIKCLKRSPRAFRQVFPDKIAPNIELLRTSGVSDVLISS 203

Query: 219 YVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKC 278
            V+N P+SAF +HSKF S VNQV++MGFDP K VFV AI VLS M+  T ERKFKA+ K 
Sbjct: 204 LVSNVPDSAFRRHSKFRSIVNQVRDMGFDPSKIVFVEAIRVLSGMSSLTWERKFKAYSKY 263

Query: 279 GWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIP 338
           GWSKDQTLLAFK+FP    +SE+ IFK MDFFVHKMG+   DIA  PTV+ +SLEKRIIP
Sbjct: 264 GWSKDQTLLAFKKFPPCLSVSEEKIFKNMDFFVHKMGLMAVDIATKPTVMVFSLEKRIIP 323

Query: 339 RCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFDV 397
           RCSVVQSLY KGLLKKELSI SILHPTE  FL++YVTKFP D T LLHLY GEVK FDV
Sbjct: 324 RCSVVQSLYSKGLLKKELSIASILHPTEKTFLEKYVTKFPKDATWLLHLYTGEVKIFDV 346

[Close]
BLAST of Sed0005504 vs. NCBI nr
Match: KAG6605716.1 (Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.4 bits (903), Expect = 4.9e-93
Identity = 196/327 (59.94%), Postives = 224/327 (68.50%), Query Frame = 0 

Query: 71  PLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKS-DKLLLPK 130
           PL+TALDVASKVKFKTPKNPD VL+LL+TQGFT +QI+ IVKQFP LLF  +  +L  P 
Sbjct: 2   PLQTALDVASKVKFKTPKNPDIVLSLLRTQGFTKSQISKIVKQFPRLLFFLTLIELFCPN 61

Query: 131 LEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRA 190
           L +   LG                                      +EKV++CLKRSPRA
Sbjct: 62  LNFCIPLG------------------------------------SPNEKVIKCLKRSPRA 121

Query: 191 FLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLK 250
           F +     I PNI LLR   VS+V IS  V+N P+SAF +HSKF S VNQV++MGFDP K
Sbjct: 122 FRQVFPDKIAPNIELLRTSGVSDVLISSLVSNVPDSAFRRHSKFRSIVNQVRDMGFDPSK 181

Query: 251 HVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFF 310
            VFV AI VLS M+  T ERKFKA+ K GWSKDQTLLAFK+FP    +SE+ IFK MDFF
Sbjct: 182 IVFVEAIRVLSGMSSLTWERKFKAYSKYGWSKDQTLLAFKKFPPCLSVSEEKIFKNMDFF 241

Query: 311 VHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFL 370
           VHKMG+   DIA  PTV+ +SLEKRIIPRCSVVQSLY KGLLKKELS  SILHPTE  FL
Sbjct: 242 VHKMGLMAVDIATKPTVMVFSLEKRIIPRCSVVQSLYSKGLLKKELSFASILHPTEKTFL 292

Query: 371 KRYVTKFPNDVTSLLHLYNGEVKGFDV 397
           ++YVTKFP D T LLHLY GEVK FDV
Sbjct: 302 EKYVTKFPKDATWLLHLYTGEVKIFDV 292

[Close]
BLAST of Sed0005504 vs. NCBI nr
Match: XP_023872118.1 (uncharacterized protein LOC111984734 [Quercus suber])

HSP 1 Score: 349.0 bits (894), Expect = 5.5e-92
Identity = 192/373 (51.47%), Postives = 251/373 (67.29%), Query Frame = 0 

Query: 29  LGF-QQRTF---KFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKF 88
           LGF QQ  F   K ++    + S    + +  +SF+VSYL+NSCG   ++A+  + KV+ 
Sbjct: 4   LGFLQQNAFFIVKSYASTGLSESKHQQQQQEKHSFTVSYLINSCGLSSKSAILASQKVQL 63

Query: 89  KTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLE-YLHSLGLSQSEC 148
             P  PDSVL LL+  GFTNTQI  +V+  P LL S   K LLPK+E +L  +G+S S+ 
Sbjct: 64  GNPDRPDSVLNLLKEHGFTNTQIAKLVRTHPMLLLSDPGKTLLPKIEFFLSKVGVSSSDL 123

Query: 149 VQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIA 208
            +I+ S P LL RSL+ H++PCY FLKSVLV DEKV++ LKRS  +FL ++  N+VPNIA
Sbjct: 124 TRILTSSPLLLVRSLENHLIPCYNFLKSVLVVDEKVIKTLKRSQLSFLFDVTNNMVPNIA 183

Query: 209 LLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMT 268
           LLR+  V E  ISF VTNFP +AF KH+KF   V++VKEMGFDPLK VFV+AI V+ KM 
Sbjct: 184 LLREFGVPESAISFLVTNFPGTAFIKHAKFVKAVHEVKEMGFDPLKLVFVLAIQVILKMK 243

Query: 269 PFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAAN 328
               E K + +++ GWSKD  LLAF+R+P   L SE+ I KTMDF VHKMG    DIA N
Sbjct: 244 KPIWESKLEVYKRWGWSKDVALLAFRRYPNCVLFSEEKITKTMDFLVHKMGCPSADIAKN 303

Query: 329 PTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSL 388
           P+VL  SLEKRIIPRCSVVQ L  K L+K + S  ++L P+E  FL+++V KF  +V  L
Sbjct: 304 PSVLGLSLEKRIIPRCSVVQVLLAKDLIKIKFSSATLLLPSEKCFLEKFVIKFQANVPQL 363

Query: 389 LHLYNGEVKGFDV 397
           L +Y G++   DV
Sbjct: 364 LDVYQGKMDLLDV 376

[Close]
BLAST of Sed0005504 vs. NCBI nr
Match: XP_023872115.1 (uncharacterized protein LOC111984729 [Quercus suber])

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-90
Identity = 192/378 (50.79%), Postives = 253/378 (66.93%), Query Frame = 0 

Query: 29  LGF-QQRTF---KFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKF 88
           LGF QQ  F   K ++    + S    + +  +SF+VSYL+NSCG   ++A+  + KV+ 
Sbjct: 4   LGFLQQNAFFIVKSYASTGLSESKHQQQQQEKHSFTVSYLINSCGLSSKSAILASQKVQL 63

Query: 89  KTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLE-YLHSLGLSQSEC 148
             P  PDSVL+LL+  GFTNTQI  +V+  P LL S   K LLPK+E +L  +G+S S+ 
Sbjct: 64  GNPDRPDSVLSLLKEHGFTNTQIAKLVRTHPMLLLSDPGKTLLPKIEFFLSKVGVSSSDL 123

Query: 149 VQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIA 208
            +I+ S P LL RSL+ H++PCY FLKSVL+ DEKV++ LKRS  +FL ++  N+VPNIA
Sbjct: 124 TRILTSSPLLLDRSLENHLIPCYNFLKSVLLVDEKVIKTLKRSQLSFLFDVTNNMVPNIA 183

Query: 209 LLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMT 268
           LLR+  V E  ISF VTNFP +AF KH+KF   V++VKEMGFDPLK VFV+AI V+ KM 
Sbjct: 184 LLREFGVPESAISFLVTNFPGTAFIKHAKFVKAVHEVKEMGFDPLKLVFVLAIQVILKMK 243

Query: 269 PFTLERKFKA-----FRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPE 328
               E K +      +++ GWSKD  LLAF+R+P   LLSE+ I KTMDF VHKMG    
Sbjct: 244 KPIWESKLEVYKRWFYKRWGWSKDVALLAFRRYPNCVLLSEEKITKTMDFLVHKMGCPSA 303

Query: 329 DIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPN 388
           DIA NP+VL  SLEKRIIPRCSVVQ L  K L+K + S  ++L P+E  FL+++V KF  
Sbjct: 304 DIAKNPSVLGLSLEKRIIPRCSVVQVLLAKDLIKIKFSSATLLLPSEKCFLEKFVIKFQA 363

Query: 389 DVTSLLHLYNGEVKGFDV 397
           +V  LL +Y G++   DV
Sbjct: 364 NVPQLLDVYQGKMDLLDV 381

[Close]
BLAST of Sed0005504 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-07
Identity = 63/310 (20.32%), Postives = 134/310 (43.23%), Query Frame = 0 

Query: 72  LETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLE 131
           +++ L+ +S++    P   +  + +L++ GF ++ ++ I+  FP +L     + +  K+E
Sbjct: 130 IKSVLEHSSRIGI-GPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIE-IRRKIE 189

Query: 132 YLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCY-QFLKSVLVEDEKVLRCLKRSPRAF 191
           +L  +G+++    +  H  P +LG   +  + P   +F+K    +D+ V + + R PR  
Sbjct: 190 FLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSKDD-VKKEIAREPRVL 249

Query: 192 LRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKH 251
              L++  +P             C+    T                           LK 
Sbjct: 250 --GLELGELPR------------CLELINT---------------------------LKC 309

Query: 252 VFVMAISVLSK---MTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMD 311
             V+ +S++S+      F ++ +     K G  +        + P+  L   ++I K ++
Sbjct: 310 REVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIE 369

Query: 312 FFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENI 371
           F  ++MG     +A  P  L  +L+K+I+PR +V+  L  KG L  ++ +  ++ P+   
Sbjct: 370 FLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKR 395

Query: 372 FLKRYVTKFP 378
           F   YV  +P
Sbjct: 430 FYNLYVMPYP 395

[Close]
BLAST of Sed0005504 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 9.0e-05
Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 0 

Query: 94  LTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLEYL-HSLGLSQSECVQIIHSCPF 153
           LT L+T GF       I  +   LL S  ++ L+PK+EYL   LG ++ E  +++   P 
Sbjct: 142 LTFLKTLGFVGRD--TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPA 201

Query: 154 LLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRK 208
           LL  S+  ++VP  +F    +  D K    LKR P+ F  +L+  I P   LL++
Sbjct: 202 LLTYSVDNNLVPKVEFFIEEMRGDVKE---LKRFPQYFSFSLERKIKPRHRLLKE 251

[Close]
BLAST of Sed0005504 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.6e-04
Identity = 33/136 (24.26%), Postives = 64/136 (47.06%), Query Frame = 0 

Query: 46  PSVRHL-EDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTN 105
           P++R+L E+  I    V  +V      L   LD+    ++         + L +  G   
Sbjct: 293 PTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRY---------MFLSKELGAPR 352

Query: 106 TQITNIVKQFPSLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVP 165
             +  +VK+ P LL    D   LP++ +L S+G+  S+ ++++ S   +L  SL+ ++ P
Sbjct: 353 DSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKP 412

Query: 166 CYQFLKSVLVEDEKVL 181
            Y +L + L  +  +L
Sbjct: 413 KYMYLVNELNNEVHIL 419

[Close]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match: A0A6J1DPE0 (uncharacterized protein LOC111023077 OS=Momordica charantia OX=3673 GN=LOC111023077 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.6e-140
Identity = 264/395 (66.84%), Postives = 307/395 (77.72%), Query Frame = 0 

Query: 1   MIRILGLKISRSSVTRLAVATSSFDNLGLGFQQRTFKFFSVLANNPSVRHLEDERINSFS 60
           M RILGLKI   S  R+AVATS F+NLG    QR  KFFSVLA+  S          S  
Sbjct: 1   MFRILGLKIFSPSSRRIAVATSFFNNLGF---QRDDKFFSVLADKGSFE-------RSSI 60

Query: 61  VSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFS 120
           V YLVNSCG   ETALDVA+KV FKTP  PD VL+LL++QG T TQI+ ++K FPSLLF 
Sbjct: 61  VLYLVNSCGMASETALDVAAKVNFKTPSEPDLVLSLLRSQGLTKTQISKVIKIFPSLLFF 120

Query: 121 KSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVL 180
            SD+ LLPK E+LHS+GLS+SEC  I++SCPFLLG SLK H++PCY +LKSVLVEDEKVL
Sbjct: 121 NSDRTLLPKFEFLHSIGLSKSECAVIVYSCPFLLGSSLKNHLIPCYNYLKSVLVEDEKVL 180

Query: 181 RCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQV 240
           +CLKRSPRAF ++L+  I PNIA LR   VSEV IS+ V+NFP+SAF  HSKFC+ VN+V
Sbjct: 181 KCLKRSPRAFRQDLRGKIAPNIAFLRTSGVSEVAISYLVSNFPDSAFLNHSKFCNIVNRV 240

Query: 241 KEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEK 300
           +++G DP K VFV AI VLS MT  T ERKF+A+RKCGWSKDQTLLAFK++P   +LSE+
Sbjct: 241 RDLGSDPSKIVFVEAIRVLSGMTSLTWERKFEAYRKCGWSKDQTLLAFKKYPPCLILSEE 300

Query: 301 NIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSI 360
            IFKTM+FFV KMG+KPEDIA  PTV+ +SLEKRIIPRCSVVQSLY KGLLKKEL I SI
Sbjct: 301 KIFKTMEFFVQKMGLKPEDIATRPTVMVFSLEKRIIPRCSVVQSLYSKGLLKKELIITSI 360

Query: 361 LHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFD 396
           LHPTE  FL++YVTKFP DV  LLHLY GEVK FD
Sbjct: 361 LHPTEKTFLEKYVTKFPKDVAWLLHLYTGEVKVFD 385

[Close]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match: A0A2I4GIN5 (uncharacterized protein LOC109008206 OS=Juglans regia OX=51240 GN=LOC109008206 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 2.5e-90
Identity = 182/360 (50.56%), Postives = 248/360 (68.89%), Query Frame = 0 

Query: 37  KFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTL 96
           K F+ +  + S   LE+++ +SF+VSY +N CG   ++A+  + +V+F+TP+ PDSVL L
Sbjct: 32  KSFASVGLSESNEKLEEKK-HSFAVSYFINYCGLSTKSAILASQRVRFQTPEKPDSVLNL 91

Query: 97  LQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGR 156
           L+  GFTNTQI+ +V+  P LL S  +K LLPK+E+  S+G S S+  +I+ S P LL R
Sbjct: 92  LKENGFTNTQISRLVRIEPQLLLSNPEKTLLPKIEFFRSMGASSSDRSRILSSNPTLLRR 151

Query: 157 SLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCIS 216
           SL+KH++PCY FLKSVL+ DEKV+   KRSP     +   N+VPNIALLR+  V +  IS
Sbjct: 152 SLEKHLIPCYDFLKSVLILDEKVVTVFKRSPWVVCIH---NMVPNIALLRQVGVPQSTIS 211

Query: 217 FYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRK 276
           F VTNFP +AF KH++F   +++VKEMG+DP K VFV AI VL +M+   LE K + +++
Sbjct: 212 FLVTNFPSTAFVKHTRFVEAIHEVKEMGYDPSKTVFVHAIQVLLRMSGPKLESKLELYKR 271

Query: 277 CGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRII 336
            GWSKD  LLAFKR P   LLS+K I K MDFFV+KMG    DIA NPTVL +SLEKRII
Sbjct: 272 WGWSKDVALLAFKRHPNCMLLSDKKITKAMDFFVNKMGSSLTDIARNPTVLFFSLEKRII 331

Query: 337 PRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFDV 396
           PRCSV+Q L  KGL+K ++S+ + + P E  FL ++V KF + V  LL++Y  +    DV
Sbjct: 332 PRCSVIQILIAKGLVKNDMSLSTFILPGERCFLDKFVIKFQDRVPELLNVYMEKTDLLDV 387

[Close]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match: A0A7N2RB48 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 183/341 (53.67%), Postives = 235/341 (68.91%), Query Frame = 0 

Query: 57  NSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPS 116
           +SF++SYL+NSCG   ++A+  + KV+   P  PDSVL+LL+  GFTNTQI  +V+  P 
Sbjct: 115 HSFTLSYLINSCGLSSKSAILASQKVQLGNPDRPDSVLSLLKEHGFTNTQIAKLVRTHPM 174

Query: 117 LLFSKSDKLLLPKLE-YLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVE 176
           LL S   K LLPK+E +L  +G+S S+  +I+ S P LL RSL+ H++PCY FLKSVLV 
Sbjct: 175 LLLSDPGKTLLPKIEFFLSKVGVSSSDLTRILTSSPLLLVRSLENHLIPCYNFLKSVLVV 234

Query: 177 DEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCS 236
           DEKV+  LKRS  +FL ++  N+VPNIALLR+  V E  ISF VTNFP SAF KH+KF  
Sbjct: 235 DEKVITTLKRSQLSFLFDVTNNMVPNIALLREFGVPESAISFLVTNFPGSAFIKHAKFVK 294

Query: 237 FVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSF 296
            V++VKEMGFDP K VFV+AI V+ KM     E K + +++ GWSKD  LLAF+R P   
Sbjct: 295 AVHEVKEMGFDPSKLVFVLAIQVILKMKKPMWESKLEVYKRWGWSKDVALLAFRRNPNFV 354

Query: 297 LLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKEL 356
           L SE+ I KTMDF VHKMG    DIA NP+VL  SLEKRIIPRCSVVQ L  K L+K + 
Sbjct: 355 LFSEEKITKTMDFLVHKMGWPSADIAKNPSVLGLSLEKRIIPRCSVVQVLLAKDLIKNKF 414

Query: 357 SIFSILHPTENIFLKRYVTKFPNDVTSLLHLYNGEVKGFDV 397
           S  + L P+E  FL+++V KF  +V  LL +Y G++   DV
Sbjct: 415 SSATFLLPSEKCFLEKFVIKFQANVAQLLDVYQGKMDLLDV 455

[Close]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match: A0A7N2MLJ9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 189/373 (50.67%), Postives = 246/373 (65.95%), Query Frame = 0 

Query: 29  LGF-QQRTF---KFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKF 88
           LGF QQ  F   K ++    + S      +  +SF+VSYL+NSCG   ++A+  + KV+ 
Sbjct: 4   LGFLQQNAFFIVKSYASTGFSESKHQQRQQEKHSFTVSYLINSCGLSSKSAILASQKVQL 63

Query: 89  KTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLE-YLHSLGLSQSEC 148
             P  PDSVL+LL+  GFTNTQI  +V+  P LL S   K LLPK+E +L  +G+S S+ 
Sbjct: 64  GNPDRPDSVLSLLKEHGFTNTQIAKLVRTHPMLLLSDPGKTLLPKIEFFLSKVGVSSSDL 123

Query: 149 VQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIA 208
            +I+ S P LL RSL+ H++PCY FLKSVLV DEKV+  LKRS  +FL ++  N++PNIA
Sbjct: 124 TRILTSSPLLLVRSLENHLIPCYNFLKSVLVVDEKVITTLKRSQLSFLFDVTNNMIPNIA 183

Query: 209 LLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMT 268
           LLR+  V E  ISF VTNFP SAF KH++F   V++VKEMGFDP K VFV+AI V+ KM 
Sbjct: 184 LLREFGVPESAISFLVTNFPGSAFIKHARFVKAVHEVKEMGFDPSKSVFVLAIQVILKMK 243

Query: 269 PFTLERKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAAN 328
               E K + +++ GWSKD  LLAF+R P   LLSE+ I KTMDF V+KMG    DIA N
Sbjct: 244 KPMWESKLEVYKRWGWSKDVALLAFRRNPNFVLLSEEKITKTMDFLVYKMGWPSADIAKN 303

Query: 329 PTVLCYSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSL 388
           P+VL   LEKRIIPRCSVVQ L  K L+K + S  + L P+E  FL+++V KF   V  L
Sbjct: 304 PSVLGLCLEKRIIPRCSVVQVLLAKDLIKSKFSSATFLLPSEKCFLEKFVIKFQASVPQL 363

Query: 389 LHLYNGEVKGFDV 397
           L +Y G++   DV
Sbjct: 364 LDVYQGKMDLLDV 376

[Close]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match: A0A2N9EC15 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS157 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 8.8e-88
Identity = 170/362 (46.96%), Postives = 241/362 (66.57%), Query Frame = 0 

Query: 29  LGFQQRTFKFFSVLANNPSVRHLEDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPK 88
           LGF Q      +  +++  V   +D + ++F+VSYLVNSCG PLE A   + ++ F+T +
Sbjct: 27  LGFPQNPLFVVNYFSSSSFVGP-QDAKKHNFTVSYLVNSCGLPLERAKHASHRLHFETSE 86

Query: 89  NPDSVLTLLQTQGFTNTQITNIVKQFPSLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIH 148
            PD VL LL+  GFTN QI+ +V   P LL S  +K + PKLE+L S+GLS SEC +II 
Sbjct: 87  RPDLVLNLLKNHGFTNAQISKVVNADPELLLSDPEKTIFPKLEFLGSIGLSHSECAKIIS 146

Query: 149 SCPFLLGRSLKKHIVPCYQFLKSVLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKC 208
           +CP LL RSLK HI+P Y FLKSVL+ +EKV++  K +     +++Q N+ PN+ LLR+ 
Sbjct: 147 NCPSLLSRSLKNHIMPLYDFLKSVLLMNEKVVKTFKIARWGLSQDVQKNLAPNLTLLREI 206

Query: 209 AVSEVCISFYVTNFPESAFSKHSKFCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLE 268
            V +  IS +++ +P +AF KH+KF   V +VK +GFDP+K VFV AI VL+       E
Sbjct: 207 GVPQSSISLFLSYYPSTAFIKHTKFDELVEEVKNLGFDPIKSVFVHAIHVLASHRKVNWE 266

Query: 269 RKFKAFRKCGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLC 328
            K + +++ GWSKD+TL AFK+ P    ++E+NI KTMDF V++MG   E ++ NP VL 
Sbjct: 267 HKIEVYQRWGWSKDETLFAFKKHPGCMTIAEENITKTMDFLVNRMGWPSEYVSRNPIVLL 326

Query: 329 YSLEKRIIPRCSVVQSLYEKGLLKKELSIFSILHPTENIFLKRYVTKFPNDVTSLLHLYN 388
           +SLEKRIIPRCSV Q L  K L+KK+L++ +IL P +  FL+ YVTKF  ++  LL +Y 
Sbjct: 327 FSLEKRIIPRCSVFQILLSKALIKKDLALCTILQPKDKYFLENYVTKFQQNIPQLLEVYQ 386

Query: 389 GE 391
           G+
Sbjct: 387 GK 387

[Close]
BLAST of Sed0005504 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 271.9 bits (694), Expect = 7.9e-73
Identity = 139/342 (40.64%), Postives = 221/342 (64.62%), Query Frame = 0 

Query: 52  EDERINSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIV 111
           E ++  SF+++YL++SCG   ++A   + K+   +P+ P++VL LL+  GFT  QI+++V
Sbjct: 63  EQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLV 122

Query: 112 KQFPSLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKS 171
           K+ P LL + ++ +LLPKL +  S+G+S+S   + + S P +L RSL   ++P Y FLKS
Sbjct: 123 KKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKS 182

Query: 172 VLVEDEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHS 231
           VL  DEK++  L+R+   FL +   N+VPNI  + +  V E CI   +T+FPE+   K+ 
Sbjct: 183 VLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNH 242

Query: 232 KFCSFVNQVKEMGFDPLKHVFVMAISVLS-KMTPFTLERKFKAFRKCGWSKDQTLLAFKR 291
           +F +   Q +EMGF+P K  FV+AI  LS K      ++ F+ +++ GWS+D  + AFK+
Sbjct: 243 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 302

Query: 292 FPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGL 351
            P   +LSE+ I +TM++FV++M + P  IA  P VL +SLEKRIIPRCSV + L   GL
Sbjct: 303 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 362

Query: 352 LKKELSIFSILHPTENIFLKRYVTKFPNDVTSLLHLYNGEVK 393
           +K++ S+ S+L P E +FL++ V K+  ++  L++LY G  K
Sbjct: 363 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLGCTK 404

[Close]
BLAST of Sed0005504 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.5e-63
Identity = 129/330 (39.09%), Postives = 199/330 (60.30%), Query Frame = 0 

Query: 56  INSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFP 115
           + SF+VSYLV+SCG  LE+A   +  VK  + K PDSVL L +  GFTN QIT+++K FP
Sbjct: 54  LESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFP 113

Query: 116 SLLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVE 175
            +L    + ++ PKL +  S+G S S+  ++I S P +L  SL K ++PCY  LKS+LVE
Sbjct: 114 RVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVE 173

Query: 176 DEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCS 235
           +E V++CLKR  R F   +   +   +++ R+  V +  I + V   P + FS+  +F  
Sbjct: 174 EESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNE 233

Query: 236 FVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFPQSF 295
            +N+V   GFDP K  FV A+      +   +ERKFK F+  GWSK+  + A  RFP   
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293

Query: 296 LLSEKNIFKTMDFFVHKMGIKPEDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKE- 355
            +S++ I  T+++ V+ +G++  DI A P VL  S+EKRI PR  V+  L  KGL+KKE 
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353

Query: 356 LSIFSILHPTENIFLKRYVTKFPNDVTSLL 385
           ++ F+IL    + F+ ++V K+ +++  L+
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLV 383

[Close]
BLAST of Sed0005504 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-47
Identity = 126/373 (33.78%), Postives = 194/373 (52.01%), Query Frame = 0 

Query: 57  NSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPS 116
           N+F+VSYLV+S G   + A  ++ KV F+   NPDSVL LL + GFT +QI+ I++ +P 
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 117 LLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVE- 176
           LL + ++K L PKL++L S G S SE  +I+ S P +LG+   K I   Y F+K  L+E 
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 177 ---DEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSK 236
              +EK+   L +       NL+ N + N+++LR+  +    +   + +  +    K  K
Sbjct: 171 SSKNEKLCHSLPQG------NLE-NKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EK 230

Query: 237 FCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFP 296
           F   + +V EMGFDP    FV A+ V+ KM   T+E K   ++  G+       +FK++P
Sbjct: 231 FEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 290

Query: 297 QSFLLSEKNIF-----------------------------------KTMDFFVHKMGIKP 356
            S  +SEK +                                    K  +F V KM    
Sbjct: 291 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 350

Query: 357 EDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKEL-SIFSILHPTENIFLKRYVTKF 388
           + + +NP V  YSLEKRI+PR +V+++L  KGL++ EL SI  +L  T+ +FL RYV   
Sbjct: 351 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 410

[Close]
BLAST of Sed0005504 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-47
Identity = 126/373 (33.78%), Postives = 194/373 (52.01%), Query Frame = 0 

Query: 57  NSFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPS 116
           N+F+VSYLV+S G   + A  ++ KV F+   NPDSVL LL + GFT +QI+ I++ +P 
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 117 LLFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVE- 176
           LL + ++K L PKL++L S G S SE  +I+ S P +LG+   K I   Y F+K  L+E 
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 177 ---DEKVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSK 236
              +EK+   L +       NL+ N + N+++LR+  +    +   + +  +    K  K
Sbjct: 171 SSKNEKLCHSLPQG------NLE-NKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EK 230

Query: 237 FCSFVNQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRKCGWSKDQTLLAFKRFP 296
           F   + +V EMGFDP    FV A+ V+ KM   T+E K   ++  G+       +FK++P
Sbjct: 231 FEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 290

Query: 297 QSFLLSEKNIF-----------------------------------KTMDFFVHKMGIKP 356
            S  +SEK +                                    K  +F V KM    
Sbjct: 291 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 350

Query: 357 EDIAANPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKEL-SIFSILHPTENIFLKRYVTKF 388
           + + +NP V  YSLEKRI+PR +V+++L  KGL++ EL SI  +L  T+ +FL RYV   
Sbjct: 351 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 410

[Close]
BLAST of Sed0005504 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 186.0 bits (471), Expect = 5.7e-47
Identity = 125/368 (33.97%), Postives = 194/368 (52.72%), Query Frame = 0 

Query: 58  SFSVSYLVNSCGFPLETALDVASKVKFKTPKNPDSVLTLLQTQGFTNTQITNIVKQFPSL 117
           SF+VSYLV+S G P + A  V+ KV F+   NPDSVL LL++ GFT++QI+ IV  +P L
Sbjct: 52  SFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQL 111

Query: 118 LFSKSDKLLLPKLEYLHSLGLSQSECVQIIHSCPFLLGRSLKKHIVPCYQFLKSVLVEDE 177
           L + ++K L PKL++L S G S SE  +I+ + P +LG+   K I   Y F+K  L++  
Sbjct: 112 LVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKS 171

Query: 178 KVLRCLKRSPRAFLRNLQVNIVPNIALLRKCAVSEVCISFYVTNFPESAFSKHSKFCSFV 237
                 ++S + F +    N + N+++LR+  +    +   + +     F K  KF   +
Sbjct: 172 SK---SEKSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGK-EKFEESL 231

Query: 238 NQVKEMGFDPLKHVFVMAISVLSKMTPFTLERKFKAFRK--------------------- 297
            +V EMGFDP    FV A+ V+ +++   +E K  A+++                     
Sbjct: 232 KKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTH 291

Query: 298 --------------CGWSKDQTLLAFKRFPQSFLLSEKNIFKTMDFFVHKMGIKPEDIAA 357
                          G+S+D+  +  KRFPQ   LS + + K  +F V KM    + + +
Sbjct: 292 SEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVS 351

Query: 358 NPTVLCYSLEKRIIPRCSVVQSLYEKGLLKKEL-SIFSILHPTENIFLKRYVTKFPND-- 388
           NP VL YSLEKR +PR +VVQ+L  KGL+  EL SI  +   T+ +FL RYV +  +   
Sbjct: 352 NPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQL 411

The following BLAST results are available for this feature:
BLAST of Sed0005504 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156115.15.4e-14066.84uncharacterized protein LOC111023077 [Momordica charantia][more]
KAG7035624.13.3e-10560.72Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argy... [more]
KAG6605716.14.9e-9359.94Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argy... [more]
XP_023872118.15.5e-9251.47uncharacterized protein LOC111984734 [Quercus suber][more]
XP_023872115.11.3e-9050.79uncharacterized protein LOC111984729 [Quercus suber][more]
BLAST of Sed0005504 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C6A11.5e-0720.32Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ... [more]
Q84X539.0e-0533.04Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
Q9FM807.6e-0424.26Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Sed0005504 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DPE02.6e-14066.84uncharacterized protein LOC111023077 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A2I4GIN52.5e-9050.56uncharacterized protein LOC109008206 OS=Juglans regia OX=51240 GN=LOC109008206 P... [more]
A0A7N2RB482.1e-8953.67Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A7N2MLJ92.1e-8950.67Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A2N9EC158.8e-8846.96Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS157 PE=3 SV=1[more]
BLAST of Sed0005504 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G07900.17.9e-7340.64Mitochondrial transcription termination factor family protein [more]
AT1G21150.12.5e-6339.09Mitochondrial transcription termination factor family protein [more]
AT1G61970.14.4e-4733.78Mitochondrial transcription termination factor family protein [more]
AT1G61970.24.4e-4733.78Mitochondrial transcription termination factor family protein [more]
AT1G61980.15.7e-4733.97Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 317..351
e-value: 0.21
score: 20.6
coord: 144..175
e-value: 0.0057
score: 25.9
coord: 285..316
e-value: 0.21
score: 20.7
coord: 108..139
e-value: 0.017
score: 24.3
coord: 39..71
e-value: 320.0
score: 7.8
coord: 180..211
e-value: 320.0
score: 7.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 94..253
e-value: 3.8E-19
score: 68.8
coord: 266..368
e-value: 2.3E-18
score: 66.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 48..391
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 156..381
e-value: 8.4E-48
score: 164.8
NoneNo IPR availablePANTHERPTHR13068:SF133MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 48..391

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005504.1Sed0005504.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0003690 double-stranded DNA binding