Sed0005482 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAATTAATCACTAATTTATTATTGGAAGAAAAAAAAAATGGCTTTAGTTTCCAAGTTATACTGCTCCTCGTCGGAAGTGGCGCTTTTGGTCAGAAAAAGGCCGCCGGCGGTGAACGGCGGCGGGTTTGTGGTGACAGATCACAGCCAGAAAGTTGTGTTCAAGGCGGAGGGCTGTGGGACTCTGGGCGCCAACGGCAAGCTTCTTCTTCGAGATGCCTATGCAAATCCATTGCTTCTAATACGAAAAAATGTTAGTAATTATTAATTCCACATCTTGGCTTTGCCTTTTATTTATGTGAATTCATTCTGTATTTGATTTAAAAAAAAAAAATAGTAGTTTCAAATTTTTATTATAAAAATATGATGGTTTTGTTGGCTTTATTAGATTTTGTGTCTTTTTATTTCTCTCTTTCACGTTCTTTTATATATTTTGTGCAGTTATTAATTGTCTTCGAATGTTTTTATTAAGAAATGATGGTGTGTTAAATTTAGTTAAAGAATTGAGTTTGTTAAATCAAGAAGTATAATAACTGTTTATTAAATTAAATAAATTTTGGTTTGTTGATTTTAAAAATGAGTGGGAAATGATAAGAAAATAATTAGGAGATGATGAAGAATTGATGGATTTTATAAAGGTGATTTAAAATTTGTTTTAGTTGATTTGATAAATAGTTAGAAAAATATTAAGATGTGATCAATTTATATTTAATTACGTGAAGACAAAAAAAAAAGGGTTGCGTGAGAGACGACAACAACAAATTATCATATTTTTATAACTAGTTTTTTTTTTTTTTTGAAAACCTGTATTTTTTTCACTAGTAATTCCATAAAAGAACCTTTTTTGTATACTTTTTATAAGTAGTTTGGAAAGATCCGTTTGTATTTGAAATGTAACGCATTCAAATAATTAGAACAATTTGTTTTTGTAAAAAGTATTAAAAAAATACTCAACAGTTGTAAAGAAAAAAAATCATTTTATGAATAGATATAGTATTAATTAAATTAGTATGGAGTTTATTAGCTCATAAAAAAAAGTATGGAGTTTATTTGGTGCAGTTTATTTTTTTTTATTTTAGTGGGAGATTAGTAATGTCTCATTTTTTTTTTATGAGCAAATTCACTCCACCACGTGGCACAATAACAAAGTACCACATGGCAAATATGTAAAATTTAGAAAATGATTCCATGTTAGATAGAAAAAAAAATTAATCAAATTCATTTTTTTTTAAACAATTCAAATTCATTTTTATTGAACTCAATTCGGTTTAATAAACTAATAGAATAATAATTCTAAAAATGAACTTAATAGAATAATCCTTATCAATTTGTTGATGTGAACCTTAAATATATTTTCCAACACTTACGAGAATAATATCCAATCATATAGGAAATAGTATCATTAGTGAAATCATCCTTTATATGTATATATAATACATTTTATGTATACACATTATTATCTTCATATATGTACATGTATATATATATATAAACTAAGTGCATAATAAGTTGGTAAGTATTGCTTTTTACGTCAATAGATGTACGCTAATGTCGTTGAACTGTTGTTCTTGTTAGTAGTATTGATCTTAATTTAATACGAAGTTTCATCCTAATAACAAATCAATAAAACGAAAAGTATTTCACCTATCTTATAAATGTCAGAGTTAGTTTAATGAACGGTATATTTGACTCGGGATGATGATTCAGGGAGGGATGGTGGAAGCGCTAAGCATGTACCGAACATGGAAAGGCTACAAATACGACTTCGAAGGGTCCGAGGAGCTCGTGTTTCGGCTAAAGCACCAGAATTCACGTTCCATTTTAGGGAGAAACAAAGAAACCATCAAAATCTCAACCACAATGGCGCAAAACCACTCGGAGGTAAGAGGCTATTTTCCGGCGAGAAAATGCACCATTGTGGACTCCGGCGGACGGGTGGCGGCGGAGATAGGCGGCGGAGACGGCGGCAACAAAGATGTGTACCGTGTGGTGGTCAAGCCCGGCGTTGACCAGGCTTTTGTGTGCGGCGTCATTGCCGTTCTCGATAACCTTTACGGAGAATCCACCGCTTGCGCCTATTTTTAAAATTCTACAAATTGTTTCGCTTTTATTTTTCTTATATCTGTATTTTTACATTTATGTATGCCGCGTTCACATTGTTGCGGTTTTGTTGAATAATTTGTTGCTTGTTTGTAACTCAATATTTTTTTTAGCTTAAAGTATTATTATTTTTTTTTTTGAAA AGAAAATTAATCACTAATTTATTATTGGAAGAAAAAAAAAATGGCTTTAGTTTCCAAGTTATACTGCTCCTCGTCGGAAGTGGCGCTTTTGGTCAGAAAAAGGCCGCCGGCGGTGAACGGCGGCGGGTTTGTGGTGACAGATCACAGCCAGAAAGTTGTGTTCAAGGCGGAGGGCTGTGGGACTCTGGGCGCCAACGGCAAGCTTCTTCTTCGAGATGCCTATGCAAATCCATTGCTTCTAATACGAAAAAATGGAGGGATGGTGGAAGCGCTAAGCATGTACCGAACATGGAAAGGCTACAAATACGACTTCGAAGGGTCCGAGGAGCTCGTGTTTCGGCTAAAGCACCAGAATTCACGTTCCATTTTAGGGAGAAACAAAGAAACCATCAAAATCTCAACCACAATGGCGCAAAACCACTCGGAGGTAAGAGGCTATTTTCCGGCGAGAAAATGCACCATTGTGGACTCCGGCGGACGGGTGGCGGCGGAGATAGGCGGCGGAGACGGCGGCAACAAAGATGTGTACCGTGTGGTGGTCAAGCCCGGCGTTGACCAGGCTTTTGTGTGCGGCGTCATTGCCGTTCTCGATAACCTTTACGGAGAATCCACCGCTTGCGCCTATTTTTAAAATTCTACAAATTGTTTCGCTTTTATTTTTCTTATATCTGTATTTTTACATTTATGTATGCCGCGTTCACATTGTTGCGGTTTTGTTGAATAATTTGTTGCTTGTTTGTAACTCAATATTTTTTTTAGCTTAAAGTATTATTATTTTTTTTTTTGAAA ATGGCTTTAGTTTCCAAGTTATACTGCTCCTCGTCGGAAGTGGCGCTTTTGGTCAGAAAAAGGCCGCCGGCGGTGAACGGCGGCGGGTTTGTGGTGACAGATCACAGCCAGAAAGTTGTGTTCAAGGCGGAGGGCTGTGGGACTCTGGGCGCCAACGGCAAGCTTCTTCTTCGAGATGCCTATGCAAATCCATTGCTTCTAATACGAAAAAATGGAGGGATGGTGGAAGCGCTAAGCATGTACCGAACATGGAAAGGCTACAAATACGACTTCGAAGGGTCCGAGGAGCTCGTGTTTCGGCTAAAGCACCAGAATTCACGTTCCATTTTAGGGAGAAACAAAGAAACCATCAAAATCTCAACCACAATGGCGCAAAACCACTCGGAGGTAAGAGGCTATTTTCCGGCGAGAAAATGCACCATTGTGGACTCCGGCGGACGGGTGGCGGCGGAGATAGGCGGCGGAGACGGCGGCAACAAAGATGTGTACCGTGTGGTGGTCAAGCCCGGCGTTGACCAGGCTTTTGTGTGCGGCGTCATTGCCGTTCTCGATAACCTTTACGGAGAATCCACCGCTTGCGCCTATTTTTAA MALVSKLYCSSSEVALLVRKRPPAVNGGGFVVTDHSQKVVFKAEGCGTLGANGKLLLRDAYANPLLLIRKNGGMVEALSMYRTWKGYKYDFEGSEELVFRLKHQNSRSILGRNKETIKISTTMAQNHSEVRGYFPARKCTIVDSGGRVAAEIGGGDGGNKDVYRVVVKPGVDQAFVCGVIAVLDNLYGESTACAYF Homology
BLAST of Sed0005482 vs. NCBI nr
Match: MBA0869103.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 224.9 bits (572), Expect = 5.9e-55 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. NCBI nr
Match: MBA0730138.1 (hypothetical protein [Gossypium laxum]) HSP 1 Score: 224.9 bits (572), Expect = 5.9e-55 Identity = 117/202 (57.92%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. NCBI nr
Match: XP_012451577.1 (PREDICTED: protein LURP-one-related 6 [Gossypium raimondii] >KAB2024462.1 hypothetical protein ES319_D06G088700v1 [Gossypium barbadense] >TYG64285.1 hypothetical protein ES288_D06G095000v1 [Gossypium darwinii] >TYI76649.1 hypothetical protein E1A91_D06G090600v1 [Gossypium mustelinum] >KJB65282.1 hypothetical protein B456_010G089100 [Gossypium raimondii] >PPD97418.1 hypothetical protein GOBAR_DD05568 [Gossypium barbadense]) HSP 1 Score: 223.8 bits (569), Expect = 1.3e-54 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. NCBI nr
Match: PON41325.1 (LURP1-related protein domain containing protein [Parasponia andersonii]) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-54 Identity = 117/205 (57.07%), Postives = 144/205 (70.24%), Query Frame = 0
BLAST of Sed0005482 vs. NCBI nr
Match: KAG8491429.1 (hypothetical protein CXB51_014627 [Gossypium anomalum]) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-54 Identity = 117/202 (57.92%), Postives = 147/202 (72.77%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy Swiss-Prot
Match: Q9ZUF7 (Protein LURP-one-related 6 OS=Arabidopsis thaliana OX=3702 GN=At2g05910 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.8e-52 Identity = 103/192 (53.65%), Postives = 139/192 (72.40%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy Swiss-Prot
Match: A0MFH4 (Protein LURP-one-related 16 OS=Arabidopsis thaliana OX=3702 GN=At5g20640 PE=2 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 9.8e-45 Identity = 100/205 (48.78%), Postives = 135/205 (65.85%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy Swiss-Prot
Match: Q9SSC7 (Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.2e-15 Identity = 62/198 (31.31%), Postives = 98/198 (49.49%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy Swiss-Prot
Match: Q9LVZ8 (Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09 Identity = 47/194 (24.23%), Postives = 89/194 (45.88%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy Swiss-Prot
Match: Q9LZX1 (Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 43/203 (21.18%), Postives = 90/203 (44.33%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy TrEMBL
Match: A0A7J9MDB6 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_023177 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.8e-55 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy TrEMBL
Match: A0A7J9B1E2 (Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_022526 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.8e-55 Identity = 117/202 (57.92%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy TrEMBL
Match: A0A0D2R4J3 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G089100 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 6.3e-55 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy TrEMBL
Match: A0A5J5QZ82 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D06G088700v1 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 6.3e-55 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. ExPASy TrEMBL
Match: A0A5D2C7G3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D06G095000v1 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 6.3e-55 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Sed0005482 vs. TAIR 10
Match: AT2G05910.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53 Identity = 103/192 (53.65%), Postives = 139/192 (72.40%), Query Frame = 0
BLAST of Sed0005482 vs. TAIR 10
Match: AT5G20640.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46 Identity = 100/205 (48.78%), Postives = 135/205 (65.85%), Query Frame = 0
BLAST of Sed0005482 vs. TAIR 10
Match: AT1G80120.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-16 Identity = 62/198 (31.31%), Postives = 98/198 (49.49%), Query Frame = 0
BLAST of Sed0005482 vs. TAIR 10
Match: AT3G15810.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10 Identity = 47/194 (24.23%), Postives = 89/194 (45.88%), Query Frame = 0
BLAST of Sed0005482 vs. TAIR 10
Match: AT5G01750.2 (Protein of unknown function (DUF567) ) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-07 Identity = 43/203 (21.18%), Postives = 90/203 (44.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|