Sed0005453 (gene) Chayote v1

Overview


Name	Sed0005453
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WRKY domain-containing protein
Location	LG11: 20890431 .. 20891610 (+)
RNA-Seq Expression	Sed0005453
Synteny	Sed0005453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAACCTTCCTAATTTTGGAGGAAGGTCAGTGGGAAGCTGCCTATCAAAGTAAACTCACTTCACATTTTTGCTATTCTCTATATCTATGCCACAACTTTTTTTAACACTAAAGATTTTATTTTAATTTCAGAAACAAAAGGGTGTCAACTTTTTGTTGATTTCTATTCACAGTTTCCAAATGTCTTACAATAGTAACCAGCACCCTGCAACGACAGAGAGCGATCTTTCCGAGCAGCCTGGGTTCGAGTTGACCGACTGGATGTTCAATGGTTGGCTAAATGCAAACTCTCCCTCTCGGGTTGACTCGGTCATGTACCCGGTTTATCAATCGAGCGAGGAGGTTAATGTCGGGAGCACCTTGGACCAAGGAGAGCCTAGCAATAGTAAGCACACATAAATTCTTGTTACAATTTAGTTGATAAGTATTATTATATTCCGAGGTTTTGGTTTGTTGAATGATCTTGAATGATTTTACAGTAGGAGAGAATGGGAGAGAGAGGGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTCTTGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGTAAGAAAGTTATTATCAAAAGAAAAGAAAAAAAAACAGTAACTTTCCTAATTGAACATGGAAATCTGTCCTAAAATAGCATGTTCCATTGTTTGATACAATAAGCAGAGATGCTCTAATCTGACTTGGCTCAACCACCATCTCTGAAATGCAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCTAAATATGTGATAACAACATACGAGGGTGTCCATACCCATGAAAGCTCTTGATTTGTTTATTTTTTACACTAAATATCTCAATGTTTCAGAGATAATATATTTCTGGGTTTTTTGTAATGAGTATGAAAATCGATGTCGGGTTAAAGATATAGAATATCAATACGTGGTTATCTGGTCTGGAGTTTGTAGCATACAAAACAGAAAGACATTCACTGTTTCATATGAACACAGATTTGATTGAATGGCTAATCATTTCTCATCACTGAGAAGAAGGTCCATTTCGAGACTTTCCGGTCAGTTATGTCTGCAGCTTGAAAAGTACATTTTGATACTAAATTCG

mRNA sequence

ATTGAACCTTCCTAATTTTGGAGGAAGGTCAGTGGGAAGCTGCCTATCAAAAAACAAAAGGGTGTCAACTTTTTGTTGATTTCTATTCACAGTTTCCAAATGTCTTACAATAGTAACCAGCACCCTGCAACGACAGAGAGCGATCTTTCCGAGCAGCCTGGGTTCGAGTTGACCGACTGGATGTTCAATGGTTGGCTAAATGCAAACTCTCCCTCTCGGGTTGACTCGGTCATGTACCCGGTTTATCAATCGAGCGAGGAGGTTAATGTCGGGAGCACCTTGGACCAAGGAGAGCCTAGCAATATAGGAGAGAATGGGAGAGAGAGGGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTCTTGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCTAAATATGTGATAACAACATACGAGGGTGTCCATACCCATGAAAGCTCTTGATTTGTTTATTTTTTACACTAAATATCTCAATGTTTCAGAGATAATATATTTCTGGGTTTTTTGTAATGAGTATGAAAATCGATGTCGGGTTAAAGATATAGAATATCAATACGTGGTTATCTGGTCTGGAGTTTGTAGCATACAAAACAGAAAGACATTCACTGTTTCATATGAACACAGATTTGATTGAATGGCTAATCATTTCTCATCACTGAGAAGAAGGTCCATTTCGAGACTTTCCGGTCAGTTATGTCTGCAGCTTGAAAAGTACATTTTGATACTAAATTCG

Coding sequence (CDS)

ATGTCTTACAATAGTAACCAGCACCCTGCAACGACAGAGAGCGATCTTTCCGAGCAGCCTGGGTTCGAGTTGACCGACTGGATGTTCAATGGTTGGCTAAATGCAAACTCTCCCTCTCGGGTTGACTCGGTCATGTACCCGGTTTATCAATCGAGCGAGGAGGTTAATGTCGGGAGCACCTTGGACCAAGGAGAGCCTAGCAATATAGGAGAGAATGGGAGAGAGAGGGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTCTTGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCTAAATATGTGATAACAACATACGAGGGTGTCCATACCCATGAAAGCTCTTGA

Protein sequence

MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSEEVNVGSTLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHESS

Homology

[Close]

BLAST of Sed0005453 vs. NCBI nr
Match: XP_022962098.1 (probable WRKY transcription factor 50 isoform X1 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 6.2e-68
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH   +E+DL EQPGFE TDWMF+ WL+ NSP  VDS MYP YQS E E   GS
Sbjct: 1   MSYNSNQHLDKSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPAYQSGEIEEFDGS 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+IG+NGREREVRERFAFKTKSEVE+LDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSSIGDNGREREVRERFAFKTKSEVEVLDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154

[Close]

BLAST of Sed0005453 vs. NCBI nr
Match: XP_022997285.1 (probable WRKY transcription factor 50 isoform X1 [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 128/154 (83.12%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH   +E+DLS+QPGFE TDWMF+ WL+ NSP  VDS MYPVYQS E E  VGS
Sbjct: 1   MSYNSNQHLVMSENDLSDQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+IG++GRER VRERFAFKTKSEVE+LDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSSIGDSGRERGVRERFAFKTKSEVEVLDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTH SS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHASS 154

[Close]

BLAST of Sed0005453 vs. NCBI nr
Match: XP_004144271.1 (probable WRKY transcription factor 50 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 130/154 (84.42%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH  T+ESDLSEQPGFE TDWMF+GWLN NS S  DSVMYPVYQ  E +  VG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+  + GRERE+RERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSS-RDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. NCBI nr
Match: XP_008445519.1 (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis melo] >KAA0064721.1 putative WRKY transcription factor 50 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH  T+ESDLSEQPGFE TDWMF+GWLN NS +  DSVMYPVYQ  E +  VG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ Q EPS+  ++GREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQAEPSS-RDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. NCBI nr
Match: XP_023546261.1 (probable WRKY transcription factor 50 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 5.8e-66
Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH   +E+DL EQPGFE TDWMF+ WL+ NSP  VDS MYPVYQS E E  VGS
Sbjct: 1   MSYNSNQHLVMSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+  ++GREREVRERFAFKTKSEVE+LDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSS-RDSGREREVRERFAFKTKSEVEVLDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot
Match: Q8VWQ5 (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-32
Identity = 61/78 (78.21%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 75  EREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDR 134
           +++++ R AFKT+SEVE+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERDR
Sbjct: 94  KKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDR 153

Query: 135 EDPKYVITTYEGVHTHES 153
           +DP +VITTYEG H H S
Sbjct: 154 DDPSFVITTYEGSHNHSS 171

[Close]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot
Match: Q93WU9 (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.9e-29
Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 8   HPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSEEVNVGS--TLDQGE 67
           +P    +D S    F++ +   NG +     S    V    + + E    GS  TL + E
Sbjct: 21  NPFMDNNDFSNLMFFDIDEGGNNGLIEEEISSPTSIVSSETF-TGESGGSGSATTLSKKE 80

Query: 68  PSNIG--ENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 127
            +N G  E+ + +E   R AF+T+S+++++DDGFKWRKYGKK VKN+ N RNYYKCS EG
Sbjct: 81  STNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEG 140

Query: 128 CPVKKRVERDREDPKYVITTYEGVHTHES 153
           C VKKRVERD +D  YVITTYEGVH HES
Sbjct: 141 CSVKKRVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 65  EPSNIGENGREREVRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 124
           +P    +   +++ RE RFAF TKS+++ LDDG++WRKYG+K VKNSP PR+YY+C+  G
Sbjct: 191 KPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVG 250

Query: 125 CPVKKRVERDREDPKYVITTYEGVHTH 151
           C VKKRVER  +DP  V+TTYEG HTH
Sbjct: 251 CGVKKRVERSSDDPSIVMTTYEGQHTH 277

[Close]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot
Match: Q6VWJ6 (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.3e-23
Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 46  YPVYQSSEEVNVGSTLDQGEPSNIGENGREREVRE-RFAFKTKSEVEILDDGFKWRKYGK 105
           YP   ++EE ++ S   + E + I      +  RE R   +T SEV+ILDDG++WRKYG+
Sbjct: 314 YPGDDATEEEDLESKRRKMESAGIDAALMGKPNREPRVVVQTVSEVDILDDGYRWRKYGQ 373

Query: 106 KMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHE 152
           K+VK +PNPR+YYKC+  GCPV+K VER   DPK VITTYEG H HE
Sbjct: 374 KVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNHE 420

[Close]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot
Match: Q9SVB7 (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-23
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 76  REVRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDR 135
           R+VRE RF FKT SEV++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  
Sbjct: 204 RKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLA 263

Query: 136 EDPKYVITTYEGVHTHESS 154
           +DP+ VITTYEG H H  S
Sbjct: 264 DDPRMVITTYEGRHLHSPS 282

[Close]

BLAST of Sed0005453 vs. ExPASy TrEMBL
Match: A0A6J1HDT7 (probable WRKY transcription factor 50 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462657 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH   +E+DL EQPGFE TDWMF+ WL+ NSP  VDS MYP YQS E E   GS
Sbjct: 1   MSYNSNQHLDKSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPAYQSGEIEEFDGS 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+IG+NGREREVRERFAFKTKSEVE+LDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSSIGDNGREREVRERFAFKTKSEVEVLDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154

[Close]

BLAST of Sed0005453 vs. ExPASy TrEMBL
Match: A0A6J1K961 (probable WRKY transcription factor 50 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492235 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.7e-68
Identity = 128/154 (83.12%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH   +E+DLS+QPGFE TDWMF+ WL+ NSP  VDS MYPVYQS E E  VGS
Sbjct: 1   MSYNSNQHLVMSENDLSDQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+IG++GRER VRERFAFKTKSEVE+LDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSSIGDSGRERGVRERFAFKTKSEVEVLDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTH SS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHASS 154

[Close]

BLAST of Sed0005453 vs. ExPASy TrEMBL
Match: A0A0A0KD40 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363560 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 130/154 (84.42%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH  T+ESDLSEQPGFE TDWMF+GWLN NS S  DSVMYPVYQ  E +  VG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ QGEPS+  + GRERE+RERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQGEPSS-RDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. ExPASy TrEMBL
Match: A0A5A7VG90 (Putative WRKY transcription factor 50 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00250 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH  T+ESDLSEQPGFE TDWMF+GWLN NS +  DSVMYPVYQ  E +  VG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ Q EPS+  ++GREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQAEPSS-RDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. ExPASy TrEMBL
Match: A0A1S3BCG1 (probable WRKY transcription factor 50 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488510 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSYNSNQHPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSE-EVNVGS 60
           MSYNSNQH  T+ESDLSEQPGFE TDWMF+GWLN NS +  DSVMYPVYQ  E +  VG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TLDQGEPSNIGENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120
           T+ Q EPS+  ++GREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC
Sbjct: 61  TIQQAEPSS-RDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKC 120

Query: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 SVEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Sed0005453 vs. TAIR 10
Match: AT5G26170.1 (WRKY DNA-binding protein 50 )

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-33
Identity = 61/78 (78.21%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 75  EREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDR 134
           +++++ R AFKT+SEVE+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERDR
Sbjct: 94  KKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDR 153

Query: 135 EDPKYVITTYEGVHTHES 153
           +DP +VITTYEG H H S
Sbjct: 154 DDPSFVITTYEGSHNHSS 171

[Close]

BLAST of Sed0005453 vs. TAIR 10
Match: AT5G64810.1 (WRKY DNA-binding protein 51 )

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-30
Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 8   HPATTESDLSEQPGFELTDWMFNGWLNANSPSRVDSVMYPVYQSSEEVNVGS--TLDQGE 67
           +P    +D S    F++ +   NG +     S    V    + + E    GS  TL + E
Sbjct: 21  NPFMDNNDFSNLMFFDIDEGGNNGLIEEEISSPTSIVSSETF-TGESGGSGSATTLSKKE 80

Query: 68  PSNIG--ENGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 127
            +N G  E+ + +E   R AF+T+S+++++DDGFKWRKYGKK VKN+ N RNYYKCS EG
Sbjct: 81  STNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEG 140

Query: 128 CPVKKRVERDREDPKYVITTYEGVHTHES 153
           C VKKRVERD +D  YVITTYEGVH HES
Sbjct: 141 CSVKKRVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of Sed0005453 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 )

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 65  EPSNIGENGREREVRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 124
           +P    +   +++ RE RFAF TKS+++ LDDG++WRKYG+K VKNSP PR+YY+C+  G
Sbjct: 191 KPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVG 250

Query: 125 CPVKKRVERDREDPKYVITTYEGVHTH 151
           C VKKRVER  +DP  V+TTYEG HTH
Sbjct: 251 CGVKKRVERSSDDPSIVMTTYEGQHTH 277

[Close]

BLAST of Sed0005453 vs. TAIR 10
Match: AT4G39410.1 (WRKY DNA-binding protein 13 )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 76  REVRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDR 135
           R+VRE RF FKT SEV++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  
Sbjct: 204 RKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLA 263

Query: 136 EDPKYVITTYEGVHTHESS 154
           +DP+ VITTYEG H H  S
Sbjct: 264 DDPRMVITTYEGRHLHSPS 282

[Close]

BLAST of Sed0005453 vs. TAIR 10
Match: AT1G29860.1 (WRKY DNA-binding protein 71 )

HSP 1 Score: 107.8 bits (268), Expect = 7.6e-24
Identity = 60/135 (44.44%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 30  NGWLNANSPSRVDSVMYPVYQSSEEVNVGSTL---DQGEPSNIGEN-----------GRE 89
           N +LN  S S V S      +  E  N  S     ++G+   +GE+           G +
Sbjct: 58  NPYLNLTSNSPVVSSSSNEGEPKENTNDKSDQMEDNEGDLHGVGESSKQLTKQGKKKGEK 117

Query: 90  REVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRE 149
           +E   R AF TKSE++ L+DG++WRKYG+K VKNSP PR+YY+C+ + C VKKRVER  +
Sbjct: 118 KEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQ 177

Query: 150 DPKYVITTYEGVHTH 151
           DP  VITTYEG H H
Sbjct: 178 DPSIVITTYEGKHNH 192

The following BLAST results are available for this feature:

BLAST of Sed0005453 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962098.1	6.2e-68	83.77	probable WRKY transcription factor 50 isoform X1 [Cucurbita moschata]	[more]
XP_022997285.1	1.4e-67	83.12	probable WRKY transcription factor 50 isoform X1 [Cucurbita maxima]	[more]
XP_004144271.1	3.1e-67	84.42	probable WRKY transcription factor 50 [Cucumis sativus]	[more]
XP_008445519.1	1.2e-66	83.77	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis melo] >KAA0...	[more]
XP_023546261.1	5.8e-66	83.12	probable WRKY transcription factor 50 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0005453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VWQ5	2.5e-32	78.21	Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 ...	[more]
Q93WU9	5.9e-29	47.65	Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 ...	[more]
Q9FGZ4	4.8e-23	57.47	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ...	[more]
Q6VWJ6	6.3e-23	52.34	WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1	[more]
Q9SVB7	8.2e-23	63.29	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ...	[more]

BLAST of Sed0005453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDT7	3.0e-68	83.77	probable WRKY transcription factor 50 isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1K961	6.7e-68	83.12	probable WRKY transcription factor 50 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0KD40	1.5e-67	84.42	WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363560 PE=4 S...	[more]
A0A5A7VG90	5.6e-67	83.77	Putative WRKY transcription factor 50 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BCG1	5.6e-67	83.77	probable WRKY transcription factor 50 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Sed0005453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26170.1	1.8e-33	78.21	WRKY DNA-binding protein 50	[more]
AT5G64810.1	4.2e-30	47.65	WRKY DNA-binding protein 51	[more]
AT5G49520.1	3.4e-24	57.47	WRKY DNA-binding protein 48	[more]
AT4G39410.1	5.8e-24	63.29	WRKY DNA-binding protein 13	[more]
AT1G29860.1	7.6e-24	44.44	WRKY DNA-binding protein 71	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 93..152 e-value: 4.3E-37 score: 139.2
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 94..151 e-value: 4.0E-25 score: 87.8
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 88..153 score: 30.503548
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 80..146 e-value: 8.9E-33 score: 113.8
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 86..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..74
None	No IPR available	PANTHER	PTHR31221:SF171	OS05G0537100 PROTEIN	coord: 2..152
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 2..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005453.1	Sed0005453.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0043565	sequence-specific DNA binding