Sed0005443 (gene) Chayote v1

Overview
NameSed0005443
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein-ribulosamine 3-kinase
LocationLG04: 35974904 .. 35976889 (+)
RNA-Seq ExpressionSed0005443
SyntenySed0005443
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGAATTGGATTCCAAACCAGCCAACCAAACGAAATATGGTTGAATTTTCAAAAAATGAATTTCATAGGATTTGGTTGGGTGGAATCTCTACTGCAAACCAAATTCCACAAAAGTTGTACGGAGAGGAGTGATGATTCAAGCATCAGTTGGCTTGAATCTCGATAGTGAGAGAAGCAAGACGGAAGCCATGGAAGAAGAAGCAGCACCTTCACTGCCCGACCTAATTCAGTCGCTGGATCAAGCATCGTTCATGGCGAAGCAGCTTCCATCTACATCCAACCCGACCCATCTCCTTCAAATCTACAGTTCCCTCCGCCAAGCCAACCTCCGCCTCTCCCTCTTCCTCTCCCCAACTCACTTCCCCCAATCTCACCCCACTTCCGCAACCACCGCCGACGGCGACGACCCGATGCAGCTCGCCGACGCCGAAGACACTTCCCATGGCGCGATTCAATTGGTGGAGGAGAAGATGAAGGATTGCTTTATCAAGAACAAGCGGCTCAAGCGTCAACTCTCGCCATCCGCCGCGGCCGTGGCGGAGGAAAGGCGGCTGCATCCTGATGATCGGTTTGTTGCTGCGACGCCCAAGGTTTTCGATCCTCGTGCTGAGAGATTGCGGGCGTTGGACCTTATTTCTCAGTTCCATGCGTGAGGCTAAATTGAAACATCGAGCACTGTGGTGAGATTCTGTACATTACAATTATAATTTTGTGTTATTGCCATTGCTAATGCTATTATCTAATTTGTCGAAGATGCTTAGCACGTTCTGTACATACGTTTCTGAAGTTATTCTTCGGCTTATCGAATTTAAAACTCAGTGTGGATGTTTTTTGATAAGATCCTTCCAAAATTTACTAGGATGCAAAGCAAGTCGCATACTTTCGTGGTCGGGTGGGGTTAAAGGCACTTAATAGATATCATTTTAAAATAATAATAATAATAATTCGACAATAACTGGGGGTAGAAGATTCGAACCCGTAACCTCTGGATTTTTTTATCCAATATTTATGGGGATGGAATGAAAACATACTTCTTTCCTTCTAGGAGGATAAGTGAGTGGGGTAGACCTCTCTGGATTTGTGTTTCCTTGTGTTGTTGTTTCCTTTGAAAGGTCTCTCCCCTTTTCTCTTTGCTTTGGTTGTTGGTTATTCAATCAAGAAATGACAGACATCTTGGCTCTCACTCTCTTATCTTTAGTTGTGGAGTTTGTTCTTGAATAAAAAAGAAGGGATATTCGTTCTTGGAGTCCTAATCCGATTGAGTGTTTTTCTTGCTGCTTGTTTTTTCGATGTTTGTTGAATCAATGCTTGGTTGGTGAGTCTATGTTTTTCTGTCTCTTTGAAAGGTGAAAATTCAATTCTTCATTTGACAGGTTATCCGTGGCAGATTAACACTTTAGATGAGCTTTTGATTATGATGTCTACTTTGGTTGGCTTGTTTTGTTGCATTCTCTGCCGAAAGGCCAAGGAGAGCTTGTCATATTCTCTGCAATTGCAACTTTGGTCTGACTGTCTGGAGCCATTTTTTAGGTGTTTGGCTTTCAGTTTGCTAGAGACATGGCGGTTTTAGGGGATGAATGGGGAGTTTCATCTCCATCCTCCTTTCCTTGAGAAGGTGAAAGTGTGCTCTGTAATGTGGGGTGAAATGAATAATAGGATCTTTATAGAGGACCTCAGTGATGTTTGGTCTTTGGTTAGGTTCTATGTTTCTCTCTAGGCGCTGACCAAAAAGCTGTGTTGTAATTATTCCTTTGATCATTTTATTTGATTGGAGCCTCTTTCTTGAGTTGAGCTTCCTTTTATGGGCTTGGTTTTTTCCATGTCCCAGTATTCTTTCATTTTTTTTTATTTGTTGAAATTTTGGTTGTTTATCTAAAAATTATTTGAACAAAAATCACATATGCCCTTCTATGTATGTGACTTGAGTGCTGTTTGTATAAGTTTTTTCTATTGGTCTTGATTTTGTTTAGCAGATTCTATGTTAT

mRNA sequence

GGGGAATTGGATTCCAAACCAGCCAACCAAACGAAATATGGTTGAATTTTCAAAAAATGAATTTCATAGGATTTGGTTGGGTGGAATCTCTACTGCAAACCAAATTCCACAAAAGTTGTACGGAGAGGAGTGATGATTCAAGCATCAGTTGGCTTGAATCTCGATAGTGAGAGAAGCAAGACGGAAGCCATGGAAGAAGAAGCAGCACCTTCACTGCCCGACCTAATTCAGTCGCTGGATCAAGCATCGTTCATGGCGAAGCAGCTTCCATCTACATCCAACCCGACCCATCTCCTTCAAATCTACAGTTCCCTCCGCCAAGCCAACCTCCGCCTCTCCCTCTTCCTCTCCCCAACTCACTTCCCCCAATCTCACCCCACTTCCGCAACCACCGCCGACGGCGACGACCCGATGCAGCTCGCCGACGCCGAAGACACTTCCCATGGCGCGATTCAATTGGTGGAGGAGAAGATGAAGGATTGCTTTATCAAGAACAAGCGGCTCAAGCGTCAACTCTCGCCATCCGCCGCGGCCGTGGCGGAGGAAAGGCGGCTGCATCCTGATGATCGGTTTGTTGCTGCGACGCCCAAGGTTTTCGATCCTCGTGCTGAGAGATTGCGGGCGTTGGACCTTATTTCTCAGTTCCATGCGTGAGGCTAAATTGAAACATCGAGCACTGTGGTTATCCGTGGCAGATTAACACTTTAGATGAGCTTTTGATTATGATGTCTACTTTGGTTGGCTTGTTTTGTTGCATTCTCTGCCGAAAGGCCAAGGAGAGCTTGTCATATTCTCTGCAATTGCAACTTTGGTCTGACTGTCTGGAGCCATTTTTTAGGTGTTTGGCTTTCAGTTTGCTAGAGACATGGCGGTTTTAGGGGATGAATGGGGAGTTTCATCTCCATCCTCCTTTCCTTGAGAAGGTGAAAGTGTGCTCTGTAATGTGGGGTGAAATGAATAATAGGATCTTTATAGAGGACCTCAGTGATGTTTGGTCTTTGGTTAGGTTCTATGTTTCTCTCTAGGCGCTGACCAAAAAGCTGTGTTGTAATTATTCCTTTGATCATTTTATTTGATTGGAGCCTCTTTCTTGAGTTGAGCTTCCTTTTATGGGCTTGGTTTTTTCCATGTCCCAGTATTCTTTCATTTTTTTTTATTTGTTGAAATTTTGGTTGTTTATCTAAAAATTATTTGAACAAAAATCACATATGCCCTTCTATGTATGTGACTTGAGTGCTGTTTGTATAAGTTTTTTCTATTGGTCTTGATTTTGTTTAGCAGATTCTATGTTAT

Coding sequence (CDS)

ATGATTCAAGCATCAGTTGGCTTGAATCTCGATAGTGAGAGAAGCAAGACGGAAGCCATGGAAGAAGAAGCAGCACCTTCACTGCCCGACCTAATTCAGTCGCTGGATCAAGCATCGTTCATGGCGAAGCAGCTTCCATCTACATCCAACCCGACCCATCTCCTTCAAATCTACAGTTCCCTCCGCCAAGCCAACCTCCGCCTCTCCCTCTTCCTCTCCCCAACTCACTTCCCCCAATCTCACCCCACTTCCGCAACCACCGCCGACGGCGACGACCCGATGCAGCTCGCCGACGCCGAAGACACTTCCCATGGCGCGATTCAATTGGTGGAGGAGAAGATGAAGGATTGCTTTATCAAGAACAAGCGGCTCAAGCGTCAACTCTCGCCATCCGCCGCGGCCGTGGCGGAGGAAAGGCGGCTGCATCCTGATGATCGGTTTGTTGCTGCGACGCCCAAGGTTTTCGATCCTCGTGCTGAGAGATTGCGGGCGTTGGACCTTATTTCTCAGTTCCATGCGTGA

Protein sequence

MIQASVGLNLDSERSKTEAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSATTADGDDPMQLADAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
Homology
BLAST of Sed0005443 vs. NCBI nr
Match: XP_022156139.1 (uncharacterized protein LOC111023095 [Momordica charantia] >XP_022156140.1 uncharacterized protein LOC111023095 [Momordica charantia])

HSP 1 Score: 211.5 bits (537), Expect = 5.9e-51
Identity = 119/171 (69.59%), Postives = 135/171 (78.95%), Query Frame = 0

Query: 18  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHF 77
           EAM E A+PSLPDL+ SL+QASFMAKQLPSTSNP+HLLQIY+SL QAN  LS+FLS T F
Sbjct: 2   EAMAEGASPSLPDLVLSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQF 61

Query: 78  PQSHP-----------TSATTA----DGDDPMQLADAEDTSHGAIQLVEEKMKDCFIKNK 137
           PQS P           +SAT+A    DG++PMQ+ D E  S G+I++VEEKMKDCFIKNK
Sbjct: 62  PQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQNSKGSIEMVEEKMKDCFIKNK 121

Query: 138 RLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           R+KRQLSPS AA+AEERRLH DDRF  AT K FDPR ERLRALDLISQFHA
Sbjct: 122 RVKRQLSPSTAAMAEERRLHRDDRF-GATSKGFDPRVERLRALDLISQFHA 171

BLAST of Sed0005443 vs. NCBI nr
Match: XP_038876419.1 (uncharacterized protein LOC120068853 [Benincasa hispida] >XP_038876420.1 uncharacterized protein LOC120068853 [Benincasa hispida] >XP_038876421.1 uncharacterized protein LOC120068853 [Benincasa hispida] >XP_038876422.1 uncharacterized protein LOC120068853 [Benincasa hispida])

HSP 1 Score: 204.5 bits (519), Expect = 7.3e-49
Identity = 120/176 (68.18%), Postives = 135/176 (76.70%), Query Frame = 0

Query: 18  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHF 77
           EAM E A PSL DL+ SL+QASFMAKQLPS+SNPTHLLQIY+SL QANL LSLFLS T F
Sbjct: 2   EAMAEGATPSLSDLLLSLEQASFMAKQLPSSSNPTHLLQIYNSLHQANLNLSLFLSKTQF 61

Query: 78  PQSHP-----------TSATTA----DGDDPMQL-----ADAEDTSHGAIQLVEEKMKDC 137
            QS P           +SAT+A    DG++PMQ+     ADAE  S G I++VEEKMKDC
Sbjct: 62  SQSLPLPRPSINENSLSSATSAAFNDDGNEPMQVGDDDDADAEHDSKGTIEMVEEKMKDC 121

Query: 138 FIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           FIKNKR+KRQLSPSAAA+AEERR+H D+RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 122 FIKNKRVKRQLSPSAAAMAEERRVHRDNRF-TATPKGFDPHVERLRALDLISQFHA 176

BLAST of Sed0005443 vs. NCBI nr
Match: XP_008460165.1 (PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo] >KAA0040030.1 uncharacterized protein E6C27_scaffold122G003160 [Cucumis melo var. makuwa] >TYK24471.1 putative AP2-like ethylene-responsive transcription factor SNZ [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-48
Identity = 115/168 (68.45%), Postives = 127/168 (75.60%), Query Frame = 0

Query: 21  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQS 80
           E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS
Sbjct: 6   EGTAPPSLSDLLHSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQS 65

Query: 81  HP----------TSATTADGDDPMQL-----ADAEDTSHGAIQLVEEKMKDCFIKNKRLK 140
            P           S+ T+   DPMQ+     ADA   S G I++VEEKMKDCFIKNKR+K
Sbjct: 66  LPLPPPSINETSLSSATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVK 125

Query: 141 RQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           RQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 126 RQLSPSAAAMAEERRVHPHNRF-TATPKGFDPHVERLRALDLISQFHA 172

BLAST of Sed0005443 vs. NCBI nr
Match: XP_011656677.1 (uncharacterized protein LOC105435764 [Cucumis sativus] >XP_031743326.1 uncharacterized protein LOC105435764 [Cucumis sativus] >XP_031743327.1 uncharacterized protein LOC105435764 [Cucumis sativus] >XP_031743328.1 uncharacterized protein LOC105435764 [Cucumis sativus] >KGN46204.1 hypothetical protein Csa_005182 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 117/176 (66.48%), Postives = 130/176 (73.86%), Query Frame = 0

Query: 18  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTH 77
           EAM +  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH
Sbjct: 2   EAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTH 61

Query: 78  FPQSHP--------------TSATTADGDDPMQL-----ADAEDTSHGAIQLVEEKMKDC 137
            PQS P               S+ T+   DPMQ+     ADA   S G I++VEEKMKDC
Sbjct: 62  LPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDC 121

Query: 138 FIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           FIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 122 FIKNKRVKRQLSPSAAAMAEERRVHPHNRF-TATPKGFDPHVERLRALDLISQFHA 176

BLAST of Sed0005443 vs. NCBI nr
Match: KAG6574778.1 (hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013358.1 hypothetical protein SDJN02_23522, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-46
Identity = 114/173 (65.90%), Postives = 132/173 (76.30%), Query Frame = 0

Query: 21  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQS 80
           E  AAPSLPDL+ SL+QASFMAKQL STSNP HLLQIY+SL QANL LS+FLS  H+PQS
Sbjct: 6   EGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQS 65

Query: 81  HP-----------TSATTA----DGDDPMQL-----ADAEDTSHGAIQLVEEKMKDCFIK 140
            P           +SAT+A     G++PMQ+     ADAE  S G I++VEEKMKDCFIK
Sbjct: 66  LPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIK 125

Query: 141 NKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           NKR+KR+LSPSAAA+AEERR+H D+RF +AT K FDP  ERLRALDLISQFHA
Sbjct: 126 NKRVKRKLSPSAAAMAEERRVHRDNRF-SATAKGFDPHVERLRALDLISQFHA 177

BLAST of Sed0005443 vs. ExPASy TrEMBL
Match: A0A6J1DSG3 (uncharacterized protein LOC111023095 OS=Momordica charantia OX=3673 GN=LOC111023095 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-51
Identity = 119/171 (69.59%), Postives = 135/171 (78.95%), Query Frame = 0

Query: 18  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHF 77
           EAM E A+PSLPDL+ SL+QASFMAKQLPSTSNP+HLLQIY+SL QAN  LS+FLS T F
Sbjct: 2   EAMAEGASPSLPDLVLSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQF 61

Query: 78  PQSHP-----------TSATTA----DGDDPMQLADAEDTSHGAIQLVEEKMKDCFIKNK 137
           PQS P           +SAT+A    DG++PMQ+ D E  S G+I++VEEKMKDCFIKNK
Sbjct: 62  PQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQNSKGSIEMVEEKMKDCFIKNK 121

Query: 138 RLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           R+KRQLSPS AA+AEERRLH DDRF  AT K FDPR ERLRALDLISQFHA
Sbjct: 122 RVKRQLSPSTAAMAEERRLHRDDRF-GATSKGFDPRVERLRALDLISQFHA 171

BLAST of Sed0005443 vs. ExPASy TrEMBL
Match: A0A5D3DLF5 (Putative AP2-like ethylene-responsive transcription factor SNZ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00120 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 115/168 (68.45%), Postives = 127/168 (75.60%), Query Frame = 0

Query: 21  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQS 80
           E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS
Sbjct: 6   EGTAPPSLSDLLHSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQS 65

Query: 81  HP----------TSATTADGDDPMQL-----ADAEDTSHGAIQLVEEKMKDCFIKNKRLK 140
            P           S+ T+   DPMQ+     ADA   S G I++VEEKMKDCFIKNKR+K
Sbjct: 66  LPLPPPSINETSLSSATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVK 125

Query: 141 RQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           RQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 126 RQLSPSAAAMAEERRVHPHNRF-TATPKGFDPHVERLRALDLISQFHA 172

BLAST of Sed0005443 vs. ExPASy TrEMBL
Match: A0A1S3CC06 (uncharacterized protein LOC103499058 OS=Cucumis melo OX=3656 GN=LOC103499058 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 115/168 (68.45%), Postives = 127/168 (75.60%), Query Frame = 0

Query: 21  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQS 80
           E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS
Sbjct: 6   EGTAPPSLSDLLHSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQS 65

Query: 81  HP----------TSATTADGDDPMQL-----ADAEDTSHGAIQLVEEKMKDCFIKNKRLK 140
            P           S+ T+   DPMQ+     ADA   S G I++VEEKMKDCFIKNKR+K
Sbjct: 66  LPLPPPSINETSLSSATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVK 125

Query: 141 RQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           RQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 126 RQLSPSAAAMAEERRVHPHNRF-TATPKGFDPHVERLRALDLISQFHA 172

BLAST of Sed0005443 vs. ExPASy TrEMBL
Match: A0A0A0KBH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G074570 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.7e-48
Identity = 117/176 (66.48%), Postives = 130/176 (73.86%), Query Frame = 0

Query: 18  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTH 77
           EAM +  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH
Sbjct: 2   EAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTH 61

Query: 78  FPQSHP--------------TSATTADGDDPMQL-----ADAEDTSHGAIQLVEEKMKDC 137
            PQS P               S+ T+   DPMQ+     ADA   S G I++VEEKMKDC
Sbjct: 62  LPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDC 121

Query: 138 FIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
           FIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Sbjct: 122 FIKNKRVKRQLSPSAAAMAEERRVHPHNRF-TATPKGFDPHVERLRALDLISQFHA 176

BLAST of Sed0005443 vs. ExPASy TrEMBL
Match: A0A7J6GXD4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006734 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36
Identity = 93/161 (57.76%), Postives = 114/161 (70.81%), Query Frame = 0

Query: 20  MEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQ 79
           MEEEA PSLPDLI S++QA   AKQLP T+NPTHLLQIYSSLRQA+  LS FLS   FPQ
Sbjct: 1   MEEEAQPSLPDLILSMEQAILAAKQLPVTANPTHLLQIYSSLRQAHTHLSTFLSKPQFPQ 60

Query: 80  SHPTSA-TTADGDDPMQLAD-------AEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPS 139
               +A T  +G++PMQ+ +        +D+  G++  VEEKM+DCFIKNKR KR LSPS
Sbjct: 61  PLTAAADTVVNGNEPMQVGEEDEDDDVEQDSYRGSVDSVEEKMRDCFIKNKRTKRPLSPS 120

Query: 140 AAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFH 173
           A A+AEERRL+ D  +     + FDP A RLRAL+L+ QFH
Sbjct: 121 AVAMAEERRLNDDGSY--GVTEGFDPYATRLRALNLVYQFH 159

BLAST of Sed0005443 vs. TAIR 10
Match: AT1G01840.1 (unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 5.2e-21
Identity = 71/155 (45.81%), Postives = 95/155 (61.29%), Query Frame = 0

Query: 30  DLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSATTAD 89
           +LI SL+QA+ MA+Q+ +T     LLQI SSLR A+ RLS FL+     ++  + ++   
Sbjct: 9   ELISSLEQATLMAQQIGTTVGQNQLLQI-SSLRIAHQRLSAFLASIPTAEAEKSFSSV-- 68

Query: 90  GDDPMQLAD--------AEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAV---AEE 149
             +PMQL +        AE+  + AI+ VEEKM++CFI+NKRLKR LSPS+A V   A E
Sbjct: 69  --EPMQLGEEEKGEAEPAEEERYSAIEKVEEKMRECFIRNKRLKRPLSPSSAVVETSATE 128

Query: 150 RRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA 174
            R   D  F +      DP A +LRALDLI QFHA
Sbjct: 129 ERSGRDYGFDS------DPHATKLRALDLIYQFHA 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156139.15.9e-5169.59uncharacterized protein LOC111023095 [Momordica charantia] >XP_022156140.1 uncha... [more]
XP_038876419.17.3e-4968.18uncharacterized protein LOC120068853 [Benincasa hispida] >XP_038876420.1 unchara... [more]
XP_008460165.12.8e-4868.45PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo] >KAA0040030.1 unc... [more]
XP_011656677.11.8e-4766.48uncharacterized protein LOC105435764 [Cucumis sativus] >XP_031743326.1 uncharact... [more]
KAG6574778.11.5e-4665.90hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DSG32.9e-5169.59uncharacterized protein LOC111023095 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5D3DLF51.3e-4868.45Putative AP2-like ethylene-responsive transcription factor SNZ OS=Cucumis melo v... [more]
A0A1S3CC061.3e-4868.45uncharacterized protein LOC103499058 OS=Cucumis melo OX=3656 GN=LOC103499058 PE=... [more]
A0A0A0KBH18.7e-4866.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G074570 PE=4 SV=1[more]
A0A7J6GXD41.5e-3657.76Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006734 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G01840.15.2e-2145.81unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR37697AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SNZcoord: 19..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005443.1Sed0005443.1mRNA