Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTGTACGCTTCACAAATACACTTAACTAATACAAAATAATTACCAAATTCTTTACTTGCTATTTTGGTATCAGGCGCCGACTGTCTTTTTTTTCCTTTCTCTACAATATGGCACATCCTCCAATCCCTTTCAAACAGCAGTATCTACCCCTCACTATCTTAATTTTGTCCAATATATGTAACTTGGTCCCGGTTCGTTTGGACTCAACAAACTACATCCAATGGAAGGTTCAAGTGATGACAATTTTGAAAGCTCATGCCTTATTTGGGCATGTTGATGGATCAATACTAGAACCAGATGAAGGGAGTGAAGAATGTTTACCATGGATGTATTGGGACCAAGCATTGATAACTCTTATAAATGCGACCTTGTCATCATCAGCATTCTCACATGTAACATCTGCAACAACATCAAGTGAACTGTGGAAATCACTTGAAAATCGGTATTCCTCTAAAACTAGATCTAATATTCTAGCCTTACGATCTGCTCTTTATATAGTCGAAAAGACGTCATCAGAGACGGTAGAACAATTCACACGTTGGGTGAAAGATGTGGTAGACAAACTAGCCGCCGCATCCGTTAAAATAGATGATGAAGAAACTCTGCTCCATATATTAAATGGGTTACCTTCAAAATACGAGCCATTTCACACTTCGATCAGAACGAAGAGCACTTCGATCACCCTTGGCGAACTGGAAGTTTTACTTGATGCCGAGAAAAAGGGCATAGAAAAAATGTCGCCCGTAATCGAACCCACACCGACGGCTATGAATGCCTACAACAAAAATCATGTGGGTTTCTCTTCAGGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGGTGAAGAGAGACTCAATGAAGTCCTAAAAATTTGCAGAATGCTTATGATGGGCCTAGTTTTAAACATGGGACAACTAGGGAAATGACTAAATTATGGAAAATAATAAAGGTCAATGTCTACTAATAGTTAGACTTTAAATTTATGTCTTTTTTTAAAATCTGTATTTTTTTTTCATTTTTAATAGGGTGATTGATTGACTATTGTACCCTTCCTATCTTTTTTACTATTTTTTTTTCAATCTATTTTCAATAAGATATTGTGTAACTACTTTTGAATAAAACAAAATCTAAAATAGGATAACTAATTAGAAGGAACCTTAGTCAACTACTTAAAGTTGACAGTTAAATTTTTTGAAAATATACGTTGAAATTATAGATTTGGAAAATTTAAACTTAAAAGGTAGTTTTAAAATATTATTCTTCACATTGACAATATTGTTGTACACCCCCCTTACATATGTGGTATACCCTCCTACTTGTTAGTAAATTGAACATTTTTTAAATAATGACCGAGCTCCTTTGGTAAGAAAAGAAAGAAAAAATAAAAGAAAACGTACCTCGGGGCTTAAATGTGCATTTGTTTTGGAAGACAAAAAGTTCCCCAACGTTCATCACCTTGACCAAGTGCATCAAAAGCCCTACCCCAAAGGCGAGTTCCGATTTCAACCCACCCCCCGGCCGCAAAAAAGACCATTTAATCGCGTTGAGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGGTAAGCTTCCTTGTTCCTCGAGTGGCCGCTATACTTTTAAATTGTGCAAAATGGAAATCGAATCCCTAAAATGAAGGGATTCCGTTTCTGTGATTCCCATTTGTTTTTCGACCTAATATAAAAACATCATAAACGAATAGTTGCAAAAGATATGGTGAAAGATAACCCACCTCCCCGTGCTCGAGAAAGCAATCGATTGAAAGCAGCTGGATTAGTGGCGGGTTCTAAGAAGAAGCTCAGACATTGCCGATCGAATTGGTATGCCCATGCATCCCGTATATTGTTTTTAATTTTTTGACTTCTCTTCGTTTGTTTGACAATGTCTGAGTTGTAAATGGTAAATTGTCCCTACACAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGGTAGGTCCTCCAATGTTCATATGTGCTTGGTTTGTTCTCCAGTTCATTGAAACTAAACACTGTTTCAAAGGTGCAGTCAACAAATTAAAGGGACAAGAGCTCGGGAGACGAGGGCAGTAACGACACGGAAGACACAATAGAGGGTTCGTCCGATGAGGAGCAAACCCACGATGAATATCCACTTTAAAGGACCAAAGCAAAAAACCCTATAGCGGTTAGTAAATGTAGAGTTCTTGTTGCTCATTGTGTTTATCTGTCTGTTGCAACTACGCTAATATCTTTTTTGTACATAGGCTAAAGGAGATGTGAAGGGAAAGACAAAGACTAATGAGGGAGTGAAGAAAGCACCTGCAGAGCCAAAGGAAATTCTTAATACTGTAATTCTCAACCGATATTTTTGGTTGTATATATACTATGTTACCGTATATTTTTTGTGTTGGGTAAGTACATTCGCCTAGTTTGTGCCTTAAAACATGTGTCTTTGTGAACCTCATTTGTATTACTGATATGGCTATGTGTTTTAATCCCAGTTTGTATAAGATATAGGTTGCTTGAGTTAAATACGATCGTTTCCTGATGTATGTATATGGTATGGAAATGAGTGTATGTGTACATGTAGTATATTGCCATTATCCACACTGTATTCTAGACTAGATATGTGCTTTTTAATTTGTATTAAATTGTGTTATGTATAAAGAATCTGAAGCTTTAGTGTGTGGTGTATTCAAGCCTTGGTTGAATATGGATTTTCCATCTTATTTTCAAGATGACGACTATGTCATGAAAGCATCGCGTCGATCGAGGACTTTCAAGATCAACTTATGTTGTAAAAGCGGGATTATGGCTGCTATTAAAAAAAGTTTGGGGGACGAACATTCAGAAGCATTTAGACAGACTTGTTTCGGGCACTTACTCGACTTCATCGTAAATAAGATATCCTCTCAACTGCTATTACACTTGGTCCAACGTCAGTGTAAGGAAAAGAAATACCCAGAACTAACCTTCAAGATCGGGGGGAAGTACTTGACATTAGGCCTCAGGGAGTTCTGTCTCATGACAGGGTTGAACTGCAACCCACTTATGAAGATTGATAGGGATAGTCTGAAGGGTGAGGGCAGAATGAGAAAAGAATATTTTGAGGACATCAATGTTGTCAAACGTTCAACGTTGAACATGTCGTTCAAACTTAATAAGCGGGCACCGAAAGACGTTATGATAAAATTGTCTCTTCTGTACTACTTAGAGAGTTTCCTGCTGGCCAAACAAGAGAAGGTGACCGTCGAAGAGGACCATATGTACATGGTTAATGACCTTGATGCATTCAATTTGTACCCGTGGGGGGTGTTGGCATATCAATTGTTAGTTTCGACCATTCGGAATGCAGGGGTGGCGAATGGAACCTGCACGGTTGGTATGAGGGGATTGGTTTATGCCCTACTATATTGGGCCTGCGAAACAATACCTGCGCTAAGTGCTGCCCCCAGTTTCTATGCAACAAAAATAGGGACAATGCTGCCCCGTATGTTCGTTGGAACTCTGATACACAGCCGGAGTGGCATGAATTGTTGGACATATTCGAGAACCCTTCGGTAGGTAGCATTGTGTTGCCCCTTAATTTTGTGCTAACATGACTTATTTTATTTGCAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGTATGTGTACTAATTTGGCATGTATAAACATGTTTTAAATACATATACATGACTTCCCCCCCCCCTGTGTGTTCTAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGTTAGCAGTGATAGGAAATGACAGGTACGAGCCAGGCTAAAATACTATTATATGCATTATTGATGTCGTGATGCTTATAATTGATTTTGTTATGTGGTGTGCAGGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGGTGAGATCGAAACTGTGTATCCCTTAGAGATTCTATATCTTGTATGTATAACATATGTATAGCTGATGTACGCATTAATTTTTATATGTATGCCCCACCTCAATGAGCGATTGTATACTAGTCTGATTTGTGTTCAGTGCCTGCTACGAGATAAATAACTGTGTGAACCTACCATATGTATTGCTTCGGTACTACTGTGTAGTGTGTTAGTATATGTTGCTTATATCTTACTATTTTTCAGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGGTAACTTGTTTTAAATGGTTATGTTGTGGTTCAAGAACCCCGTACTTGGCATACCCCATTTTCTGACTACACCTCCCAATGTCACATGTTTTAAACTGTAAAAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG
mRNA sequence
ATGGCTCTTGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG
Coding sequence (CDS)
ATGGCTCTTGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG
Protein sequence
MALEELQLQTSMVEEWALETFVLREGEIVVLHSATFDLPRSLRSGFPVCKRHFQSAEQGSVDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKELASLENTLHRSTKGHWAEPTCWGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPGGESGDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKRADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEINVIRVTNAPQMMAKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA
Homology
BLAST of Sed0005420 vs. NCBI nr
Match:
TYK29864.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 65.1 bits (157), Expect = 1.7e-06
Identity = 93/382 (24.35%), Postives = 161/382 (42.15%), Query Frame = 0
Query: 92 PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
P K K D+ T + + P+ AT +E+GMP+F+PF E E L E+ L ++ H
Sbjct: 268 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 327
Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
A + G STS + + L K ++++ +Q+ + +E + + + ++ F ++
Sbjct: 328 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 387
Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
M A + A A + L V D+E +D +T N LGK
Sbjct: 388 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 447
Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
D +D+ G G GES G GG + K T + E+ + KA + DEE++
Sbjct: 448 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 507
Query: 332 DVVASIDEQIAMKKLCAQQKR------------------ADFFRRTKENTQMGKSRYGLQ 391
++ SIDE + ++ +++R F + K QM K +
Sbjct: 508 RLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMP 567
Query: 392 VNSTITIPPLEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWT 430
N ++ RVVL +N ++ +NA + P + G +++ +RG
Sbjct: 568 SNDRVSNMAKNTAAARVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVE 627
BLAST of Sed0005420 vs. NCBI nr
Match:
TYK26024.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 2.9e-06
Identity = 95/373 (25.47%), Postives = 163/373 (43.70%), Query Frame = 0
Query: 92 PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
P K K D+ T + + P+ AT +E+GMP+F+PF E E L E+ L ++ H
Sbjct: 271 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 330
Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
A + G STS + + L K ++++ +Q+ + +E + + + ++ F ++
Sbjct: 331 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 390
Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
M A + A A + L V D+E +D +T N LGK
Sbjct: 391 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 450
Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
D +D+ G G GES G GG + K T + E+ + KA + DEE++
Sbjct: 451 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 510
Query: 332 DVVASIDEQIAMKKLCAQQKR-------ADFFRRTKENTQ--MGKSRYGLQVNSTITIPP 391
++ SIDE + ++ +++R + R N Q GK ++ Q+ I
Sbjct: 511 RLIRSIDESVIYDEIKKKEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKII---G 570
Query: 392 LEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPE 430
DRVVL +N ++ +NA + P + G +++ +RG P
Sbjct: 571 KMSSNDRVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSS 629
BLAST of Sed0005420 vs. NCBI nr
Match:
KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 63.9 bits (154), Expect = 3.8e-06
Identity = 102/414 (24.64%), Postives = 175/414 (42.27%), Query Frame = 0
Query: 61 VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEM 120
+ T++ P R V ++ +T P K K D+ T + + P+ AT +E+
Sbjct: 395 IPTLSTPPNFFVTRISNEVPRII-NCATDTQPKWKDLKQKVFDSPT-LEVSPMLATPDEV 454
Query: 121 GMPYFSPFVEKE---LASLENTLHRSTK-GHWAEPTC-WGGKSTSPLGIELAKRLDQLAK 180
GMP+F+PF+E E L E+ L ++ H A + G STS + + L K ++++
Sbjct: 455 GMPFFAPFIETEKDILKEAEDELRKNKNFDHIASVSLNRGMPSTSEINV-LRKMVEKIEI 514
Query: 181 TQ-------EGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLV 240
+Q EG+ L+ + +N++ +LV N + + K A A + L V
Sbjct: 515 SQQRMETSVEGLLEFLKFVELKMNNRFEELVQKMNGIMETTKRH-EFMGARAFEEHLDKV 574
Query: 241 HFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPT 300
D+E +D +T N LGK D +D+ G G GES G GG +
Sbjct: 575 EEDQEEDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS 634
Query: 301 IPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------- 360
K T + E+ + KA + DEE++ ++ SIDE + ++ +++R
Sbjct: 635 --KVAKSETPPKAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQYS 694
Query: 361 -----------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN----- 420
F + K QM K + N ++ RVVL +N
Sbjct: 695 LNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAKNTAAARVVLKHLNNTKEG 754
Query: 421 -VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
++ +NA + P + G +++ +RG P + P+FD+ LSQA
Sbjct: 755 LGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 795
BLAST of Sed0005420 vs. NCBI nr
Match:
KAA0040869.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 60.8 bits (146), Expect = 3.2e-05
Identity = 84/365 (23.01%), Postives = 155/365 (42.47%), Query Frame = 0
Query: 107 EIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSP 166
E+ + P+ AT +E+GM +F+PF+E E L E+ L ++ H A + G STS
Sbjct: 162 ELEVSPMLATPDEVGMQFFAPFIETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSE 221
Query: 167 LGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAAT 226
+ + K ++++ +Q+ I +E + + + ++ F ++ M A +
Sbjct: 222 INVP-RKMVEKIEISQQRIETSVEGLLEFLKSVELKMNNRFEELEQKMNGIMEATKRHEF 281
Query: 227 KPLLPLVHFDKENL----KDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------G 286
LL H +++ ++D + + ++ D LGK D +D+ G G G
Sbjct: 282 MYLLRREHGRLKSILTRWREDQEEDDVEDLNLDTSNRTVLGKRDDDEDKDGKGLVDESQG 341
Query: 287 ES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCA 346
ES G GG + K T + E+ + KA + DEE+ ++ SIDE + ++
Sbjct: 342 ESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIYRLIRSIDESVIYDEIKK 401
Query: 347 QQKR------------------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRV 406
+++R F + K QM K + N ++ RV
Sbjct: 402 KEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARV 461
Query: 407 VLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDM 430
VL +N ++ +NA + P + G +++ +RG P + P+FD+
Sbjct: 462 VLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDL 521
BLAST of Sed0005420 vs. NCBI nr
Match:
TYK23192.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 58.2 bits (139), Expect = 2.1e-04
Identity = 95/409 (23.23%), Postives = 170/409 (41.56%), Query Frame = 0
Query: 61 VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAK--KQRKGDDADNGTEIVICPLEATDE 120
+ T++ P R V ++ + ++P K KQ+ D + + P+ AT +
Sbjct: 158 IPTLSTPPNFFATRISNEVPRIINWAADTQPKWKDLKQKVFD----SPTLEVSPMLATPD 217
Query: 121 EMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSPLGIELAKRLDQL 180
E+GMP+F+PF E E L E+ L ++ H A + G STS + + L K ++++
Sbjct: 218 EVGMPFFAPFNETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSEINV-LRKMVEKI 277
Query: 181 AKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKE 240
+Q+ + +E + + + ++ F ++ A A + L V D+E
Sbjct: 278 EISQQRMETSVEGLLEFLKSVELKMNNRFEELG-----------ARAFEEHLDKVEEDQE 337
Query: 241 NLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPTIPKAT 300
+D +T N LGK D +D+ G G GES G GG + K
Sbjct: 338 EDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS--KVA 397
Query: 301 WGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------------ 360
T + E+ + KA + DEE++ ++ SIDE + ++ +++R
Sbjct: 398 KSETPPRAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTP 457
Query: 361 ------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN------VIRV 420
F + K QM K + N ++ RVVL +N ++
Sbjct: 458 RMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARVVLKHLNNTKEGLGMKR 517
Query: 421 TNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
+NA + P + G +++ +RG P + P+FD+ LSQA
Sbjct: 518 SNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 541
BLAST of Sed0005420 vs. ExPASy TrEMBL
Match:
A0A5D3E1W7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001110 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 8.3e-07
Identity = 93/382 (24.35%), Postives = 161/382 (42.15%), Query Frame = 0
Query: 92 PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
P K K D+ T + + P+ AT +E+GMP+F+PF E E L E+ L ++ H
Sbjct: 268 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 327
Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
A + G STS + + L K ++++ +Q+ + +E + + + ++ F ++
Sbjct: 328 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 387
Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
M A + A A + L V D+E +D +T N LGK
Sbjct: 388 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 447
Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
D +D+ G G GES G GG + K T + E+ + KA + DEE++
Sbjct: 448 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 507
Query: 332 DVVASIDEQIAMKKLCAQQKR------------------ADFFRRTKENTQMGKSRYGLQ 391
++ SIDE + ++ +++R F + K QM K +
Sbjct: 508 RLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMP 567
Query: 392 VNSTITIPPLEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWT 430
N ++ RVVL +N ++ +NA + P + G +++ +RG
Sbjct: 568 SNDRVSNMAKNTAAARVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVE 627
BLAST of Sed0005420 vs. ExPASy TrEMBL
Match:
A0A5D3DR12 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00300 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 95/373 (25.47%), Postives = 163/373 (43.70%), Query Frame = 0
Query: 92 PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
P K K D+ T + + P+ AT +E+GMP+F+PF E E L E+ L ++ H
Sbjct: 271 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 330
Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
A + G STS + + L K ++++ +Q+ + +E + + + ++ F ++
Sbjct: 331 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 390
Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
M A + A A + L V D+E +D +T N LGK
Sbjct: 391 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 450
Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
D +D+ G G GES G GG + K T + E+ + KA + DEE++
Sbjct: 451 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 510
Query: 332 DVVASIDEQIAMKKLCAQQKR-------ADFFRRTKENTQ--MGKSRYGLQVNSTITIPP 391
++ SIDE + ++ +++R + R N Q GK ++ Q+ I
Sbjct: 511 RLIRSIDESVIYDEIKKKEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKII---G 570
Query: 392 LEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPE 430
DRVVL +N ++ +NA + P + G +++ +RG P
Sbjct: 571 KMSSNDRVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSS 629
BLAST of Sed0005420 vs. ExPASy TrEMBL
Match:
A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 1.8e-06
Identity = 102/414 (24.64%), Postives = 175/414 (42.27%), Query Frame = 0
Query: 61 VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEM 120
+ T++ P R V ++ +T P K K D+ T + + P+ AT +E+
Sbjct: 395 IPTLSTPPNFFVTRISNEVPRII-NCATDTQPKWKDLKQKVFDSPT-LEVSPMLATPDEV 454
Query: 121 GMPYFSPFVEKE---LASLENTLHRSTK-GHWAEPTC-WGGKSTSPLGIELAKRLDQLAK 180
GMP+F+PF+E E L E+ L ++ H A + G STS + + L K ++++
Sbjct: 455 GMPFFAPFIETEKDILKEAEDELRKNKNFDHIASVSLNRGMPSTSEINV-LRKMVEKIEI 514
Query: 181 TQ-------EGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLV 240
+Q EG+ L+ + +N++ +LV N + + K A A + L V
Sbjct: 515 SQQRMETSVEGLLEFLKFVELKMNNRFEELVQKMNGIMETTKRH-EFMGARAFEEHLDKV 574
Query: 241 HFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPT 300
D+E +D +T N LGK D +D+ G G GES G GG +
Sbjct: 575 EEDQEEDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS 634
Query: 301 IPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------- 360
K T + E+ + KA + DEE++ ++ SIDE + ++ +++R
Sbjct: 635 --KVAKSETPPKAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQYS 694
Query: 361 -----------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN----- 420
F + K QM K + N ++ RVVL +N
Sbjct: 695 LNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAKNTAAARVVLKHLNNTKEG 754
Query: 421 -VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
++ +NA + P + G +++ +RG P + P+FD+ LSQA
Sbjct: 755 LGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 795
BLAST of Sed0005420 vs. ExPASy TrEMBL
Match:
A0A5A7THT9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00190 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 84/365 (23.01%), Postives = 155/365 (42.47%), Query Frame = 0
Query: 107 EIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSP 166
E+ + P+ AT +E+GM +F+PF+E E L E+ L ++ H A + G STS
Sbjct: 162 ELEVSPMLATPDEVGMQFFAPFIETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSE 221
Query: 167 LGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAAT 226
+ + K ++++ +Q+ I +E + + + ++ F ++ M A +
Sbjct: 222 INVP-RKMVEKIEISQQRIETSVEGLLEFLKSVELKMNNRFEELEQKMNGIMEATKRHEF 281
Query: 227 KPLLPLVHFDKENL----KDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------G 286
LL H +++ ++D + + ++ D LGK D +D+ G G G
Sbjct: 282 MYLLRREHGRLKSILTRWREDQEEDDVEDLNLDTSNRTVLGKRDDDEDKDGKGLVDESQG 341
Query: 287 ES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCA 346
ES G GG + K T + E+ + KA + DEE+ ++ SIDE + ++
Sbjct: 342 ESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIYRLIRSIDESVIYDEIKK 401
Query: 347 QQKR------------------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRV 406
+++R F + K QM K + N ++ RV
Sbjct: 402 KEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARV 461
Query: 407 VLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDM 430
VL +N ++ +NA + P + G +++ +RG P + P+FD+
Sbjct: 462 VLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDL 521
BLAST of Sed0005420 vs. ExPASy TrEMBL
Match:
A0A5D3DHZ2 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002220 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 1.0e-04
Identity = 95/409 (23.23%), Postives = 170/409 (41.56%), Query Frame = 0
Query: 61 VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAK--KQRKGDDADNGTEIVICPLEATDE 120
+ T++ P R V ++ + ++P K KQ+ D + + P+ AT +
Sbjct: 158 IPTLSTPPNFFATRISNEVPRIINWAADTQPKWKDLKQKVFD----SPTLEVSPMLATPD 217
Query: 121 EMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSPLGIELAKRLDQL 180
E+GMP+F+PF E E L E+ L ++ H A + G STS + + L K ++++
Sbjct: 218 EVGMPFFAPFNETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSEINV-LRKMVEKI 277
Query: 181 AKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKE 240
+Q+ + +E + + + ++ F ++ A A + L V D+E
Sbjct: 278 EISQQRMETSVEGLLEFLKSVELKMNNRFEELG-----------ARAFEEHLDKVEEDQE 337
Query: 241 NLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPTIPKAT 300
+D +T N LGK D +D+ G G GES G GG + K
Sbjct: 338 EDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS--KVA 397
Query: 301 WGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------------ 360
T + E+ + KA + DEE++ ++ SIDE + ++ +++R
Sbjct: 398 KSETPPRAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTP 457
Query: 361 ------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN------VIRV 420
F + K QM K + N ++ RVVL +N ++
Sbjct: 458 RMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARVVLKHLNNTKEGLGMKR 517
Query: 421 TNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
+NA + P + G +++ +RG P + P+FD+ LSQA
Sbjct: 518 SNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 541
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3E1W7 | 8.3e-07 | 24.35 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00... | [more] |
A0A5D3DR12 | 1.4e-06 | 25.47 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G0... | [more] |
A0A5A7U047 | 1.8e-06 | 24.64 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00... | [more] |
A0A5A7THT9 | 1.6e-05 | 23.01 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00... | [more] |
A0A5D3DHZ2 | 1.0e-04 | 23.23 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00... | [more] |
Match Name | E-value | Identity | Description | |