Sed0005420 (gene) Chayote v1

Overview
NameSed0005420
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein Ycf2-like
LocationLG08: 21376802 .. 21382133 (+)
RNA-Seq ExpressionSed0005420
SyntenySed0005420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTGTACGCTTCACAAATACACTTAACTAATACAAAATAATTACCAAATTCTTTACTTGCTATTTTGGTATCAGGCGCCGACTGTCTTTTTTTTCCTTTCTCTACAATATGGCACATCCTCCAATCCCTTTCAAACAGCAGTATCTACCCCTCACTATCTTAATTTTGTCCAATATATGTAACTTGGTCCCGGTTCGTTTGGACTCAACAAACTACATCCAATGGAAGGTTCAAGTGATGACAATTTTGAAAGCTCATGCCTTATTTGGGCATGTTGATGGATCAATACTAGAACCAGATGAAGGGAGTGAAGAATGTTTACCATGGATGTATTGGGACCAAGCATTGATAACTCTTATAAATGCGACCTTGTCATCATCAGCATTCTCACATGTAACATCTGCAACAACATCAAGTGAACTGTGGAAATCACTTGAAAATCGGTATTCCTCTAAAACTAGATCTAATATTCTAGCCTTACGATCTGCTCTTTATATAGTCGAAAAGACGTCATCAGAGACGGTAGAACAATTCACACGTTGGGTGAAAGATGTGGTAGACAAACTAGCCGCCGCATCCGTTAAAATAGATGATGAAGAAACTCTGCTCCATATATTAAATGGGTTACCTTCAAAATACGAGCCATTTCACACTTCGATCAGAACGAAGAGCACTTCGATCACCCTTGGCGAACTGGAAGTTTTACTTGATGCCGAGAAAAAGGGCATAGAAAAAATGTCGCCCGTAATCGAACCCACACCGACGGCTATGAATGCCTACAACAAAAATCATGTGGGTTTCTCTTCAGGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGGTGAAGAGAGACTCAATGAAGTCCTAAAAATTTGCAGAATGCTTATGATGGGCCTAGTTTTAAACATGGGACAACTAGGGAAATGACTAAATTATGGAAAATAATAAAGGTCAATGTCTACTAATAGTTAGACTTTAAATTTATGTCTTTTTTTAAAATCTGTATTTTTTTTTCATTTTTAATAGGGTGATTGATTGACTATTGTACCCTTCCTATCTTTTTTACTATTTTTTTTTCAATCTATTTTCAATAAGATATTGTGTAACTACTTTTGAATAAAACAAAATCTAAAATAGGATAACTAATTAGAAGGAACCTTAGTCAACTACTTAAAGTTGACAGTTAAATTTTTTGAAAATATACGTTGAAATTATAGATTTGGAAAATTTAAACTTAAAAGGTAGTTTTAAAATATTATTCTTCACATTGACAATATTGTTGTACACCCCCCTTACATATGTGGTATACCCTCCTACTTGTTAGTAAATTGAACATTTTTTAAATAATGACCGAGCTCCTTTGGTAAGAAAAGAAAGAAAAAATAAAAGAAAACGTACCTCGGGGCTTAAATGTGCATTTGTTTTGGAAGACAAAAAGTTCCCCAACGTTCATCACCTTGACCAAGTGCATCAAAAGCCCTACCCCAAAGGCGAGTTCCGATTTCAACCCACCCCCCGGCCGCAAAAAAGACCATTTAATCGCGTTGAGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGGTAAGCTTCCTTGTTCCTCGAGTGGCCGCTATACTTTTAAATTGTGCAAAATGGAAATCGAATCCCTAAAATGAAGGGATTCCGTTTCTGTGATTCCCATTTGTTTTTCGACCTAATATAAAAACATCATAAACGAATAGTTGCAAAAGATATGGTGAAAGATAACCCACCTCCCCGTGCTCGAGAAAGCAATCGATTGAAAGCAGCTGGATTAGTGGCGGGTTCTAAGAAGAAGCTCAGACATTGCCGATCGAATTGGTATGCCCATGCATCCCGTATATTGTTTTTAATTTTTTGACTTCTCTTCGTTTGTTTGACAATGTCTGAGTTGTAAATGGTAAATTGTCCCTACACAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGGTAGGTCCTCCAATGTTCATATGTGCTTGGTTTGTTCTCCAGTTCATTGAAACTAAACACTGTTTCAAAGGTGCAGTCAACAAATTAAAGGGACAAGAGCTCGGGAGACGAGGGCAGTAACGACACGGAAGACACAATAGAGGGTTCGTCCGATGAGGAGCAAACCCACGATGAATATCCACTTTAAAGGACCAAAGCAAAAAACCCTATAGCGGTTAGTAAATGTAGAGTTCTTGTTGCTCATTGTGTTTATCTGTCTGTTGCAACTACGCTAATATCTTTTTTGTACATAGGCTAAAGGAGATGTGAAGGGAAAGACAAAGACTAATGAGGGAGTGAAGAAAGCACCTGCAGAGCCAAAGGAAATTCTTAATACTGTAATTCTCAACCGATATTTTTGGTTGTATATATACTATGTTACCGTATATTTTTTGTGTTGGGTAAGTACATTCGCCTAGTTTGTGCCTTAAAACATGTGTCTTTGTGAACCTCATTTGTATTACTGATATGGCTATGTGTTTTAATCCCAGTTTGTATAAGATATAGGTTGCTTGAGTTAAATACGATCGTTTCCTGATGTATGTATATGGTATGGAAATGAGTGTATGTGTACATGTAGTATATTGCCATTATCCACACTGTATTCTAGACTAGATATGTGCTTTTTAATTTGTATTAAATTGTGTTATGTATAAAGAATCTGAAGCTTTAGTGTGTGGTGTATTCAAGCCTTGGTTGAATATGGATTTTCCATCTTATTTTCAAGATGACGACTATGTCATGAAAGCATCGCGTCGATCGAGGACTTTCAAGATCAACTTATGTTGTAAAAGCGGGATTATGGCTGCTATTAAAAAAAGTTTGGGGGACGAACATTCAGAAGCATTTAGACAGACTTGTTTCGGGCACTTACTCGACTTCATCGTAAATAAGATATCCTCTCAACTGCTATTACACTTGGTCCAACGTCAGTGTAAGGAAAAGAAATACCCAGAACTAACCTTCAAGATCGGGGGGAAGTACTTGACATTAGGCCTCAGGGAGTTCTGTCTCATGACAGGGTTGAACTGCAACCCACTTATGAAGATTGATAGGGATAGTCTGAAGGGTGAGGGCAGAATGAGAAAAGAATATTTTGAGGACATCAATGTTGTCAAACGTTCAACGTTGAACATGTCGTTCAAACTTAATAAGCGGGCACCGAAAGACGTTATGATAAAATTGTCTCTTCTGTACTACTTAGAGAGTTTCCTGCTGGCCAAACAAGAGAAGGTGACCGTCGAAGAGGACCATATGTACATGGTTAATGACCTTGATGCATTCAATTTGTACCCGTGGGGGGTGTTGGCATATCAATTGTTAGTTTCGACCATTCGGAATGCAGGGGTGGCGAATGGAACCTGCACGGTTGGTATGAGGGGATTGGTTTATGCCCTACTATATTGGGCCTGCGAAACAATACCTGCGCTAAGTGCTGCCCCCAGTTTCTATGCAACAAAAATAGGGACAATGCTGCCCCGTATGTTCGTTGGAACTCTGATACACAGCCGGAGTGGCATGAATTGTTGGACATATTCGAGAACCCTTCGGTAGGTAGCATTGTGTTGCCCCTTAATTTTGTGCTAACATGACTTATTTTATTTGCAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGTATGTGTACTAATTTGGCATGTATAAACATGTTTTAAATACATATACATGACTTCCCCCCCCCCTGTGTGTTCTAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGTTAGCAGTGATAGGAAATGACAGGTACGAGCCAGGCTAAAATACTATTATATGCATTATTGATGTCGTGATGCTTATAATTGATTTTGTTATGTGGTGTGCAGGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGGTGAGATCGAAACTGTGTATCCCTTAGAGATTCTATATCTTGTATGTATAACATATGTATAGCTGATGTACGCATTAATTTTTATATGTATGCCCCACCTCAATGAGCGATTGTATACTAGTCTGATTTGTGTTCAGTGCCTGCTACGAGATAAATAACTGTGTGAACCTACCATATGTATTGCTTCGGTACTACTGTGTAGTGTGTTAGTATATGTTGCTTATATCTTACTATTTTTCAGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGGTAACTTGTTTTAAATGGTTATGTTGTGGTTCAAGAACCCCGTACTTGGCATACCCCATTTTCTGACTACACCTCCCAATGTCACATGTTTTAAACTGTAAAAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG

mRNA sequence

ATGGCTCTTGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG

Coding sequence (CDS)

ATGGCTCTTGAGGAGCTTCAACTCCAAACGTCAATGGTTGAGGAATGGGCCCTGGAAACTTTCGTCCTCAGGGAAGGGGAAATCGTGGTGCTTCATTCGGCGACTTTTGATCTTCCAAGAAGCTTGCGCAGTGGATTCCCAGTTTGCAAACGCCATTTTCAGAGTGCTGAACAAGGGTCTGTGGATACGGTCACAAAACCAAACACAAAAATGGAAAAAAGGGCTAAGCGGAGTGTAAAAGAGGTTGTGAAGAAACCATCAACTTCCAAGCCACCCGCAAAGAAGCAACGGAAGGGGGATGATGCAGATAATGGGACAGAGATTGTCATATGCCCGTTGGAAGCAACTGATGAAGAGATGGGAATGCCATACTTCTCCCCATTTGTTGAGAAAGAGTTAGCATCTCTAGAAAACACCTTACACCGCAGCACGAAGGGACATTGGGCAGAACCTACTTGTTGGGGGGGTAAATCTACCTCACCCCTAGGTATAGAACTTGCCAAACGACTAGATCAACTTGCAAAAACACAAGAGGGCATTAGCGCACGGCTGGAACAGATCCATGACGTGATTAATGACCAATTGTCGCAGTTAGTGACAATGTTCAACAAAATGGCTGATTATATGAAGGCATTCTGTAGTGCACCTCGGGCGGCTGCAACCAAACCCCTTTTGCCTCTTGTGCATTTCGATAAGGAGAATCTCAAGGACGATGACGGCAAGGCTAACACTAAAAACGATGTAGCCGATGACCATGCAGTGCACAAGTTGGGGAAACCACGGGATATGGATGACGAAGGGGGCCCTGGCGGTGAATCAGGAGATAGAGGTGGCCCCACGATCCCTAAGGCGACATGGGGGACTACTGTCCAAGCAAGTGAAGGTGGTGAGGCATTTAGAGAAAAAGCTAGTGATGCAGCCGATGAAGAGATGGATGATGTGGTCGCGTCAATCGATGAACAAATAGCAATGAAGAAGCTGTGTGCTCAGCAAAAGAGGGCAGACTTTTTTAGGAGGACCAAGGAGAACACCCAAATGGGGAAGTCGCGATATGGGCTGCAAGTAAACTCAACTATAACTATACCACCATTGGAAAAGTGTGGTGATAGGGTCGTGCTGAGCGAGATTAATGTTATACGAGTGACCAATGCCCCCCAGATGATGGCAAAACCTGCAGCACAAGGTGCGTATGTAGAGGTCGTGAGGGGAACAGATTGGACACCACCATCAACTGACCTACCCCCAGAGTTTGATATGCCGACGTTTGATATGAAGCTTAGCCAGGCGTAG

Protein sequence

MALEELQLQTSMVEEWALETFVLREGEIVVLHSATFDLPRSLRSGFPVCKRHFQSAEQGSVDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKELASLENTLHRSTKGHWAEPTCWGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPGGESGDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKRADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEINVIRVTNAPQMMAKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA
Homology
BLAST of Sed0005420 vs. NCBI nr
Match: TYK29864.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-06
Identity = 93/382 (24.35%), Postives = 161/382 (42.15%), Query Frame = 0

Query: 92  PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
           P  K  K    D+ T + + P+ AT +E+GMP+F+PF E E   L   E+ L ++    H
Sbjct: 268 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 327

Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
            A  +   G  STS + + L K ++++  +Q+ +   +E + + +     ++   F ++ 
Sbjct: 328 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 387

Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
             M     A +      A A +  L  V  D+E    +D   +T N          LGK 
Sbjct: 388 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 447

Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
            D +D+ G G      GES  G  GG +  K     T   +   E+ + KA +  DEE++
Sbjct: 448 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 507

Query: 332 DVVASIDEQIAMKKLCAQQKR------------------ADFFRRTKENTQMGKSRYGLQ 391
            ++ SIDE +   ++  +++R                     F + K   QM K    + 
Sbjct: 508 RLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMP 567

Query: 392 VNSTITIPPLEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWT 430
            N  ++         RVVL  +N       ++ +NA +     P + G +++ +RG    
Sbjct: 568 SNDRVSNMAKNTAAARVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVE 627

BLAST of Sed0005420 vs. NCBI nr
Match: TYK26024.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-06
Identity = 95/373 (25.47%), Postives = 163/373 (43.70%), Query Frame = 0

Query: 92  PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
           P  K  K    D+ T + + P+ AT +E+GMP+F+PF E E   L   E+ L ++    H
Sbjct: 271 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 330

Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
            A  +   G  STS + + L K ++++  +Q+ +   +E + + +     ++   F ++ 
Sbjct: 331 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 390

Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
             M     A +      A A +  L  V  D+E    +D   +T N          LGK 
Sbjct: 391 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 450

Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
            D +D+ G G      GES  G  GG +  K     T   +   E+ + KA +  DEE++
Sbjct: 451 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 510

Query: 332 DVVASIDEQIAMKKLCAQQKR-------ADFFRRTKENTQ--MGKSRYGLQVNSTITIPP 391
            ++ SIDE +   ++  +++R        +   R   N Q   GK ++  Q+   I    
Sbjct: 511 RLIRSIDESVIYDEIKKKEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKII---G 570

Query: 392 LEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPE 430
                DRVVL  +N       ++ +NA +     P + G +++ +RG    P        
Sbjct: 571 KMSSNDRVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSS 629

BLAST of Sed0005420 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 3.8e-06
Identity = 102/414 (24.64%), Postives = 175/414 (42.27%), Query Frame = 0

Query: 61  VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEM 120
           + T++ P      R    V  ++   +T   P  K  K    D+ T + + P+ AT +E+
Sbjct: 395 IPTLSTPPNFFVTRISNEVPRII-NCATDTQPKWKDLKQKVFDSPT-LEVSPMLATPDEV 454

Query: 121 GMPYFSPFVEKE---LASLENTLHRSTK-GHWAEPTC-WGGKSTSPLGIELAKRLDQLAK 180
           GMP+F+PF+E E   L   E+ L ++    H A  +   G  STS + + L K ++++  
Sbjct: 455 GMPFFAPFIETEKDILKEAEDELRKNKNFDHIASVSLNRGMPSTSEINV-LRKMVEKIEI 514

Query: 181 TQ-------EGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLV 240
           +Q       EG+   L+ +   +N++  +LV   N + +  K       A A +  L  V
Sbjct: 515 SQQRMETSVEGLLEFLKFVELKMNNRFEELVQKMNGIMETTKRH-EFMGARAFEEHLDKV 574

Query: 241 HFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPT 300
             D+E    +D   +T N          LGK  D +D+ G G      GES  G  GG +
Sbjct: 575 EEDQEEDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS 634

Query: 301 IPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------- 360
             K     T   +   E+ + KA +  DEE++ ++ SIDE +   ++  +++R       
Sbjct: 635 --KVAKSETPPKAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQYS 694

Query: 361 -----------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN----- 420
                         F + K   QM K    +  N  ++         RVVL  +N     
Sbjct: 695 LNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAKNTAAARVVLKHLNNTKEG 754

Query: 421 -VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
             ++ +NA +     P + G +++ +RG    P         + P+FD+ LSQA
Sbjct: 755 LGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 795

BLAST of Sed0005420 vs. NCBI nr
Match: KAA0040869.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-05
Identity = 84/365 (23.01%), Postives = 155/365 (42.47%), Query Frame = 0

Query: 107 EIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSP 166
           E+ + P+ AT +E+GM +F+PF+E E   L   E+ L ++    H A  +   G  STS 
Sbjct: 162 ELEVSPMLATPDEVGMQFFAPFIETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSE 221

Query: 167 LGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAAT 226
           + +   K ++++  +Q+ I   +E + + +     ++   F ++   M     A +    
Sbjct: 222 INVP-RKMVEKIEISQQRIETSVEGLLEFLKSVELKMNNRFEELEQKMNGIMEATKRHEF 281

Query: 227 KPLLPLVHFDKENL----KDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------G 286
             LL   H   +++    ++D  + + ++   D      LGK  D +D+ G G      G
Sbjct: 282 MYLLRREHGRLKSILTRWREDQEEDDVEDLNLDTSNRTVLGKRDDDEDKDGKGLVDESQG 341

Query: 287 ES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCA 346
           ES  G  GG +  K     T   +   E+ + KA +  DEE+  ++ SIDE +   ++  
Sbjct: 342 ESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIYRLIRSIDESVIYDEIKK 401

Query: 347 QQKR------------------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRV 406
           +++R                     F + K   QM K    +  N  ++         RV
Sbjct: 402 KEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARV 461

Query: 407 VLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDM 430
           VL  +N       ++ +NA +     P + G +++ +RG    P         + P+FD+
Sbjct: 462 VLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDL 521

BLAST of Sed0005420 vs. NCBI nr
Match: TYK23192.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-04
Identity = 95/409 (23.23%), Postives = 170/409 (41.56%), Query Frame = 0

Query: 61  VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAK--KQRKGDDADNGTEIVICPLEATDE 120
           + T++ P      R    V  ++   + ++P  K  KQ+  D       + + P+ AT +
Sbjct: 158 IPTLSTPPNFFATRISNEVPRIINWAADTQPKWKDLKQKVFD----SPTLEVSPMLATPD 217

Query: 121 EMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSPLGIELAKRLDQL 180
           E+GMP+F+PF E E   L   E+ L ++    H A  +   G  STS + + L K ++++
Sbjct: 218 EVGMPFFAPFNETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSEINV-LRKMVEKI 277

Query: 181 AKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKE 240
             +Q+ +   +E + + +     ++   F ++            A A +  L  V  D+E
Sbjct: 278 EISQQRMETSVEGLLEFLKSVELKMNNRFEELG-----------ARAFEEHLDKVEEDQE 337

Query: 241 NLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPTIPKAT 300
               +D   +T N          LGK  D +D+ G G      GES  G  GG +  K  
Sbjct: 338 EDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS--KVA 397

Query: 301 WGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------------ 360
              T   +   E+ + KA +  DEE++ ++ SIDE +   ++  +++R            
Sbjct: 398 KSETPPRAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTP 457

Query: 361 ------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN------VIRV 420
                    F + K   QM K    +  N  ++         RVVL  +N       ++ 
Sbjct: 458 RMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARVVLKHLNNTKEGLGMKR 517

Query: 421 TNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
           +NA +     P + G +++ +RG    P         + P+FD+ LSQA
Sbjct: 518 SNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 541

BLAST of Sed0005420 vs. ExPASy TrEMBL
Match: A0A5D3E1W7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001110 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-07
Identity = 93/382 (24.35%), Postives = 161/382 (42.15%), Query Frame = 0

Query: 92  PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
           P  K  K    D+ T + + P+ AT +E+GMP+F+PF E E   L   E+ L ++    H
Sbjct: 268 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 327

Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
            A  +   G  STS + + L K ++++  +Q+ +   +E + + +     ++   F ++ 
Sbjct: 328 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 387

Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
             M     A +      A A +  L  V  D+E    +D   +T N          LGK 
Sbjct: 388 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 447

Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
            D +D+ G G      GES  G  GG +  K     T   +   E+ + KA +  DEE++
Sbjct: 448 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 507

Query: 332 DVVASIDEQIAMKKLCAQQKR------------------ADFFRRTKENTQMGKSRYGLQ 391
            ++ SIDE +   ++  +++R                     F + K   QM K    + 
Sbjct: 508 RLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMP 567

Query: 392 VNSTITIPPLEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWT 430
            N  ++         RVVL  +N       ++ +NA +     P + G +++ +RG    
Sbjct: 568 SNDRVSNMAKNTAAARVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVE 627

BLAST of Sed0005420 vs. ExPASy TrEMBL
Match: A0A5D3DR12 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00300 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 95/373 (25.47%), Postives = 163/373 (43.70%), Query Frame = 0

Query: 92  PAKKQRKGDDADNGTEIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGH 151
           P  K  K    D+ T + + P+ AT +E+GMP+F+PF E E   L   E+ L ++    H
Sbjct: 271 PKWKDLKQKVFDSPT-LEVSPMLATPDEVGMPFFAPFNETEKDILKEAEDELRKNKNSDH 330

Query: 152 WAEPTC-WGGKSTSPLGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMA 211
            A  +   G  STS + + L K ++++  +Q+ +   +E + + +     ++   F ++ 
Sbjct: 331 IASVSLNRGMPSTSEINV-LRKMVEKIEISQQRMETSVEGLLEFLKSVELKMNNRFEELV 390

Query: 212 DYMKAFCSAPR------AAATKPLLPLVHFDKENLKDDDGKANTKNDVADDHAVHKLGKP 271
             M     A +      A A +  L  V  D+E    +D   +T N          LGK 
Sbjct: 391 QKMNGIMEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDTSNRTV-------LGKR 450

Query: 272 RDMDDEGGPG------GES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMD 331
            D +D+ G G      GES  G  GG +  K     T   +   E+ + KA +  DEE++
Sbjct: 451 DDDEDKDGKGLMDESQGESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIN 510

Query: 332 DVVASIDEQIAMKKLCAQQKR-------ADFFRRTKENTQ--MGKSRYGLQVNSTITIPP 391
            ++ SIDE +   ++  +++R        +   R   N Q   GK ++  Q+   I    
Sbjct: 511 RLIRSIDESVIYDEIKKKEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKII---G 570

Query: 392 LEKCGDRVVLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPE 430
                DRVVL  +N       ++ +NA +     P + G +++ +RG    P        
Sbjct: 571 KMSSNDRVVLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSS 629

BLAST of Sed0005420 vs. ExPASy TrEMBL
Match: A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-06
Identity = 102/414 (24.64%), Postives = 175/414 (42.27%), Query Frame = 0

Query: 61  VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAKKQRKGDDADNGTEIVICPLEATDEEM 120
           + T++ P      R    V  ++   +T   P  K  K    D+ T + + P+ AT +E+
Sbjct: 395 IPTLSTPPNFFVTRISNEVPRII-NCATDTQPKWKDLKQKVFDSPT-LEVSPMLATPDEV 454

Query: 121 GMPYFSPFVEKE---LASLENTLHRSTK-GHWAEPTC-WGGKSTSPLGIELAKRLDQLAK 180
           GMP+F+PF+E E   L   E+ L ++    H A  +   G  STS + + L K ++++  
Sbjct: 455 GMPFFAPFIETEKDILKEAEDELRKNKNFDHIASVSLNRGMPSTSEINV-LRKMVEKIEI 514

Query: 181 TQ-------EGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLV 240
           +Q       EG+   L+ +   +N++  +LV   N + +  K       A A +  L  V
Sbjct: 515 SQQRMETSVEGLLEFLKFVELKMNNRFEELVQKMNGIMETTKRH-EFMGARAFEEHLDKV 574

Query: 241 HFDKENLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPT 300
             D+E    +D   +T N          LGK  D +D+ G G      GES  G  GG +
Sbjct: 575 EEDQEEDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS 634

Query: 301 IPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------- 360
             K     T   +   E+ + KA +  DEE++ ++ SIDE +   ++  +++R       
Sbjct: 635 --KVAKSETPPKAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQYS 694

Query: 361 -----------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN----- 420
                         F + K   QM K    +  N  ++         RVVL  +N     
Sbjct: 695 LNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAKNTAAARVVLKHLNNTKEG 754

Query: 421 -VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
             ++ +NA +     P + G +++ +RG    P         + P+FD+ LSQA
Sbjct: 755 LGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 795

BLAST of Sed0005420 vs. ExPASy TrEMBL
Match: A0A5A7THT9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00190 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 84/365 (23.01%), Postives = 155/365 (42.47%), Query Frame = 0

Query: 107 EIVICPLEATDEEMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSP 166
           E+ + P+ AT +E+GM +F+PF+E E   L   E+ L ++    H A  +   G  STS 
Sbjct: 162 ELEVSPMLATPDEVGMQFFAPFIETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSE 221

Query: 167 LGIELAKRLDQLAKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAAT 226
           + +   K ++++  +Q+ I   +E + + +     ++   F ++   M     A +    
Sbjct: 222 INVP-RKMVEKIEISQQRIETSVEGLLEFLKSVELKMNNRFEELEQKMNGIMEATKRHEF 281

Query: 227 KPLLPLVHFDKENL----KDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------G 286
             LL   H   +++    ++D  + + ++   D      LGK  D +D+ G G      G
Sbjct: 282 MYLLRREHGRLKSILTRWREDQEEDDVEDLNLDTSNRTVLGKRDDDEDKDGKGLVDESQG 341

Query: 287 ES--GDRGGPTIPKATWGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCA 346
           ES  G  GG +  K     T   +   E+ + KA +  DEE+  ++ SIDE +   ++  
Sbjct: 342 ESSRGHDGGQS--KVAKSETPPRAGDKESSQYKAPEETDEEIYRLIRSIDESVIYDEIKK 401

Query: 347 QQKR------------------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRV 406
           +++R                     F + K   QM K    +  N  ++         RV
Sbjct: 402 KEQRRRTGQYSLNSTPRMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARV 461

Query: 407 VLSEIN------VIRVTNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDM 430
           VL  +N       ++ +NA +     P + G +++ +RG    P         + P+FD+
Sbjct: 462 VLKHLNNTKEGLGMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDL 521

BLAST of Sed0005420 vs. ExPASy TrEMBL
Match: A0A5D3DHZ2 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002220 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-04
Identity = 95/409 (23.23%), Postives = 170/409 (41.56%), Query Frame = 0

Query: 61  VDTVTKPNTKMEKRAKRSVKEVVKKPSTSKPPAK--KQRKGDDADNGTEIVICPLEATDE 120
           + T++ P      R    V  ++   + ++P  K  KQ+  D       + + P+ AT +
Sbjct: 158 IPTLSTPPNFFATRISNEVPRIINWAADTQPKWKDLKQKVFD----SPTLEVSPMLATPD 217

Query: 121 EMGMPYFSPFVEKE---LASLENTLHRS-TKGHWAEPTC-WGGKSTSPLGIELAKRLDQL 180
           E+GMP+F+PF E E   L   E+ L ++    H A  +   G  STS + + L K ++++
Sbjct: 218 EVGMPFFAPFNETEKDILKEAEDELRKNKNSDHIASVSLNRGMPSTSEINV-LRKMVEKI 277

Query: 181 AKTQEGISARLEQIHDVINDQLSQLVTMFNKMADYMKAFCSAPRAAATKPLLPLVHFDKE 240
             +Q+ +   +E + + +     ++   F ++            A A +  L  V  D+E
Sbjct: 278 EISQQRMETSVEGLLEFLKSVELKMNNRFEELG-----------ARAFEEHLDKVEEDQE 337

Query: 241 NLKDDDGKANTKNDVADDHAVHKLGKPRDMDDEGGPG------GES--GDRGGPTIPKAT 300
               +D   +T N          LGK  D +D+ G G      GES  G  GG +  K  
Sbjct: 338 EDDVEDLNLDTSNRTV-------LGKRDDDEDKDGKGLMDESQGESSRGHDGGQS--KVA 397

Query: 301 WGTTVQASEGGEAFREKASDAADEEMDDVVASIDEQIAMKKLCAQQKR------------ 360
              T   +   E+ + KA +  DEE++ ++ SIDE +   ++  +++R            
Sbjct: 398 KSETPPRAGDKESSQYKAPEETDEEINRLIRSIDESVIYDEIKKKEQRRRTGQCSLNSTP 457

Query: 361 ------ADFFRRTKENTQMGKSRYGLQVNSTITIPPLEKCGDRVVLSEIN------VIRV 420
                    F + K   QM K    +  N  ++         RVVL  +N       ++ 
Sbjct: 458 RMLRNVQPAFGKIKHRPQMAKIIGKMPSNDRVSNMAENTAAARVVLKHLNNTKEGLGMKR 517

Query: 421 TNAPQMM-AKPAAQGAYVEVVRGTDWTPPSTDLPPEFDMPTFDMKLSQA 430
           +NA +     P + G +++ +RG    P         + P+FD+ LSQA
Sbjct: 518 SNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENSSSEWPSFDLHLSQA 541

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK29864.11.7e-0624.35protein Ycf2-like [Cucumis melo var. makuwa][more]
TYK26024.12.9e-0625.47protein Ycf2-like [Cucumis melo var. makuwa][more]
KAA0047596.13.8e-0624.64protein Ycf2-like [Cucumis melo var. makuwa][more]
KAA0040869.13.2e-0523.01protein Ycf2-like [Cucumis melo var. makuwa][more]
TYK23192.12.1e-0423.23protein Ycf2-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E1W78.3e-0724.35Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00... [more]
A0A5D3DR121.4e-0625.47Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G0... [more]
A0A5A7U0471.8e-0624.64Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00... [more]
A0A5A7THT91.6e-0523.01Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00... [more]
A0A5D3DHZ21.0e-0423.23Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..271

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005420.1Sed0005420.1mRNA