Sed0005409 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCATCTTCTTCCTCTGGCAGTATTATATATAAGTAAACATTTACTTTTGTCCTTCATTTTTTTCACATTCAAATTCCCATTTCTCCATCTCTTAATTAGTTCAGCTTTTTATGGTGCAGAATTAATGGAAGCTTTAGTTCCTCCCTTTCTCTACACCAAATCCACCCCTCTGCTTTTAATGCTCCACCATTACTGAACTCTCTCTCTCTCTCTCTCTCTCTCCCCCAAAATTCAAATCCTCTGTTCCATTCCATTTCCAAATCCCCTGTTTCTTTCAACAATGGCGTCCACGGATTCTTCCAATTGGAGCCTCGTAGCGGCCAGGTCCAAATCCTTGATGCTCAAGGATTATCTCCTCGACGATTTCAGCTCCTGCTCCTCCAATGGCTTCCGATCCTTCCCTCGCCGCCAATGCTGCACCACCACCGTCCGATTCCTCCTCGAAATCGATCTCCGAGTAAGAAGCAGCAGATTCCATCCCCGAGCGGCTTCGAGGAAAATCGCGCTCTCCACGATCTCCACTCTCCAAAAAGCCTCCGACGCCGTCGTCCGAGCATTCAAGCACTTACCGTTGCCGTCTTCGCCGAAATTGATCCTCAGAGCGTTTCGGAAGAAATCGGATGTCGTCAAGCCGTGTAAGTCGTTTCAGGAATTTCTCGATGAGAAAGAGCCGCCGTCGCTTTCTGACCGGAACCTCGCCGTCGCCGGAACAAACTCGATCGACAGCGTCAGTTGGACGGAGAGCGAATTCACGTTGGAGATGGTTCCGTCGTCTTCGAGCGGTGTTTCCGAGATCAGTTTCAGCAAAAACGACGCCGTTAAGGATCTTAACGATTCGCCTGGAGGTGATCTCGACGGCGCAACGTTCAGAGAAGATTCCGTTCACGAATCAAGCGTCGCCGCCGCCGCCTACCGGGAAGAATCCGTTAAGGTCTGGATTTTGTTTTTTTTTTCAGTCACGTTCTTTGCGTTATTTTTGATAACCGTCTCTGATTGGTTTCTCCAATCCATCTCCACCGTTCATTTTTTAAAAATCACCGAACTGCTAAATGGAAATTCATTATGAGTGTGTTTTTTTTTAATTTTATGAGTTTTTTTTTTTTTAGTATATACGGAGAGAAACAAATACCAATTTTTTGACTGAAACCTATGACGCTGGTGTTAAATTAGTTTATATAGTTTATATTTTTGCATTATTAATCTATGATTAATATTATAGTTTTTTTTTTTTTTTTTTTAAGTTTTCAAAAAAAAAATTATAGTTTTTTAAAATAATTGAATGTATTGATAAAATTGGAAATATTCGTAGAATTAAATAATAGAGTTTTTGCGTACATATATAATAAATTGAGATTATTTCGAAAAAATATATATTATAGATAGAGAAAATACAGCTGGATTTTGGGAGCCCATTAATTTCACGTGTGGGGTATATCTTGGGAAGTGTTAAAATACGACTCAGAGACACGCAAATTGAGTACAACGAGGTCTACGATCTTGCCATGTGGCTCGAATTGGCGAGATCTGCGGCTTCTAAACTTGCGAGACCTTTTTATTTCGTGGTACACGCGATACTAGATTGCGGCCTATTGTTTTTTTTTATAGTTATTATACTTGCCATTTCTGTTTAATATTATTGGTCTGTCATCGGCTGGCCTTATTTCTGTCGGTAAGAAAATCATGGGGATTATGTTTCTTTTTTATTTTATTTTATTAAAATTTAGAAACTTGGATTTTGCTGACTATAGATTTGGGTTGATTGAAAATAAGAGCATTCCTTTGGGTCTGTTGTTAAGCCCACATTAATTAATGTTAATTAATAAATTTCGTCTGGTTTGAGGCATCGTCTGGTTTGGGGCATTATAAATGTTATCTAATGTTTCATATGTCAACTAACATTATGTCTCATTAATTATTAATGAGTTTTTTCATGCTATATATGTTATTTTTCTGAACCACTTACATATGTAAATTAATACTACATTTTATTGTTCTTTAATCTAAAATAAACAAAAAAGAAAGTAAAATACAGTTCAAATTATGATATATATGCAAACATGAAAGTATAAATCAAATTAGATATGACCTAAACTTTTCTCTTTATATATATATATATAATTTATTAATTATAAACAGGCATTTTATGTCACTTACTCTTATTTGCAAAACTATATTATTATAAGAAAAATTGTATTTCTATTTTATTACTCTTTTTCCAAAGTGTATGAGGATTTGATGAAATTTAGAATGATGGAAAATTATTGTAAGACAATAAAACATAAGATGATAAGATACATTTATAAAATAATAGCGAAACTTGACCTTTCTTTTTGTATTCTAATTTAATAGTCTCAATAATTTCTCTTGTTAATTATTATATTAAAGTGAAAGCAAAATTAAAGTAACAAACGATGTTTAAGTGAAATAAGAAATTCAAATTTATAACCTTTTAATCTTAGACTTATATTTATGTTAGTTTTCTTTTTTTTTCTTTTTTTTGAGTAAATATTTATGTTAGTTAAACTACTATTTTGTTGGCAAGTGATAAACTACGATGTTTTAACACAATAATATTTAGAAGATCCCAATATGTGAGCTCTAAGCTGAAAATGCAGTCTTTTTTAACACAACAATTTTCTTATATGTCAATTACTACCGACACTATTCAGTTTGACGACAAAACAATGTTTCATAATAGAAGTCTTGAGATGGTTAATAAACGTTGACTTTTGGACAAAATTGCTGCAACTTTTTGCATCAATGACACAGTATTTTGTAAACTTTCGCTGTTATTAAAAACAACAAAAGATTTTTGTTTCTTTATTTATAATAGACTTAAACTTGTACACATTTTTTTTTCAATACTTGTACTTCTATACACTTCAAATTGAAGCCAATAACATATGTTTTGAAAAAAGTAAATTGAGATAGTTAAGTGAATAATGTTTATTTATGGTATAATAACAGGAATGGCCAAATGAAGAAGAAAAGGAACAGTTGAGTCCTGTTTCGGTGTTGGATTTTCCTTTCGAAGATGAAGATCAAGACATTTCCTCGTCTTTCAACTGCAACCTTCACCTCATCCAAGGTATCTCTCTCTTAAACTAAACACACAGGCAAAAGATATTATTACCCTCTAATATTTGGATTTTTCCTTCAATTTAGTCTTTCAAATTTAATATATATATATATATATAAATAATAGTATTTGAAATCTCATATTAATATGTTAATATTCCCAAAGAATGTCGCAATGGTTGAAGACTTGAATTTTGAAGGTATGCTCCTTTCAAGGTTTTGGGTTCGAGATTCACCCGTTACATTACACTTTTGATGTGGTGTACGGACGGCCATAGTTACCTTTATTTCAAAAAAAGAATACATATTAATATGTTAGTGTGTACTATTCTTTTTGGAAATCAAATCTTTGATGGTAAGGTCGTTGAACAAATATTATGTAAGTTAATTAGGCTATTTTCATTTTGGCATAAACTTATATTGGTGAAAATGGAGAGAGAAAAAAACCCCTTAGAAGATGAAGACTGCAAAAGTTTGACTAGTTTCTTGTAATAATTTGGGAGAAGGAAATAAAAATATGCATAGACACTTTTATGTTTGTGTTAAATAAAATTCGTAAATTTAAAAATATTTAATCATTCGATCCATTTTGTATTTATAGATTCCTAATTTGTTTTTTCCTTAAATATTAATTTTCTAACTTTTTTTTTTGCATTTCAACGTTTTAAGATTATGGGATATATTAGTGGCATAAGGTAGTCCAAATAATTATAGATATAAAAAATGAAATAAAATAAATTTTATGAATAAATCTTTGACTGGTTCGATATCTTTTATATTTATGAATCTTTTGAATATGTTGGGACTTATTAGACAAATAATTTGAAATTCAAATTTTGTTAGATATTTTTTAAAATTTAAACTAAACTTGCAGTTTATTTAAGTATGTAGCTCTTAATTTTATTTTTGTTTTAGTCTAAATCTCTATCAAGATAGTTGATGCTAAATCATTATGCAAGGTAACTTCATTAGCCAAAGCTAATGTGATCATCATACATTAAATTAAAAACTTAAGCAATTATTTAGTAGATCACAAGTCCAAAATTTCACCAAATTATTTTGATATAGGTAAGAGGCAAAAACATTGGACGATGCGAATGGAGAAGGGAGCCGAATTGGAGCCTCTAGACTTAAAGAAACGATTCGAAGATTTCAATTTCATATCCAAAAAAGAACACCAAAGGGAACACAAAGCATTAGAGCTTCTAAAGCTCCTCAAATCATCAACAAAATCCCAATGCTTCATAATCAAAACGGAGAATCTGCTGCTTGATTTCTTCCACGAAAAGCTCGAAGAAATCGAATCAACCTCACGCATAAGTCCCCCTCGAATTAGAGGCTATGGTTTTGAAGAACAAGTTTTGAAATCAGCACGAGATTGGATCGAAGGCGAGGCCGGAGAAATGATGATAGTGGGATGGGAGTCGCCGGAGGGACGGAAGTTGTACATTGAGGATATGGAGATGGCCGGAGAAGAGGAGGAATCGGCGGCGGAGGTTGAAGCTGAGATTTGGTTGTCTTTGCTTAATGAGCTGTTAATTGACCTCTCATAGCTTCTTCTTTAGTTTTTCTTATTTTGTTATATTGGAAAAAATGTAGCTAATTAGCAGCCAAATCTACTTGCCTAATTTAAATATATAAAAAAAAGAAGCTTGAATTATGGTCGTGTAGTTATTTGTAATAGACATGG TTCTTCTTCATCTTCTTCCTCTGGCAGTATTATATATAAGTAAACATTTACTTTTGTCCTTCATTTTTTTCACATTCAAATTCCCATTTCTCCATCTCTTAATTAGTTCAGCTTTTTATGGTGCAGAATTAATGGAAGCTTTAGTTCCTCCCTTTCTCTACACCAAATCCACCCCTCTGCTTTTAATGCTCCACCATTACTGAACTCTCTCTCTCTCTCTCTCTCTCTCCCCCAAAATTCAAATCCTCTGTTCCATTCCATTTCCAAATCCCCTGTTTCTTTCAACAATGGCGTCCACGGATTCTTCCAATTGGAGCCTCGTAGCGGCCAGGTCCAAATCCTTGATGCTCAAGGATTATCTCCTCGACGATTTCAGCTCCTGCTCCTCCAATGGCTTCCGATCCTTCCCTCGCCGCCAATGCTGCACCACCACCGTCCGATTCCTCCTCGAAATCGATCTCCGAGTAAGAAGCAGCAGATTCCATCCCCGAGCGGCTTCGAGGAAAATCGCGCTCTCCACGATCTCCACTCTCCAAAAAGCCTCCGACGCCGTCGTCCGAGCATTCAAGCACTTACCGTTGCCGTCTTCGCCGAAATTGATCCTCAGAGCGTTTCGGAAGAAATCGGATGTCGTCAAGCCGTGTAAGTCGTTTCAGGAATTTCTCGATGAGAAAGAGCCGCCGTCGCTTTCTGACCGGAACCTCGCCGTCGCCGGAACAAACTCGATCGACAGCGTCAGTTGGACGGAGAGCGAATTCACGTTGGAGATGGTTCCGTCGTCTTCGAGCGGTGTTTCCGAGATCAGTTTCAGCAAAAACGACGCCGTTAAGGATCTTAACGATTCGCCTGGAGGTGATCTCGACGGCGCAACGTTCAGAGAAGATTCCGTTCACGAATCAAGCGTCGCCGCCGCCGCCTACCGGGAAGAATCCGTTAAGGAATGGCCAAATGAAGAAGAAAAGGAACAGTTGAGTCCTGTTTCGGTGTTGGATTTTCCTTTCGAAGATGAAGATCAAGACATTTCCTCGTCTTTCAACTGCAACCTTCACCTCATCCAAGGTAAGAGGCAAAAACATTGGACGATGCGAATGGAGAAGGGAGCCGAATTGGAGCCTCTAGACTTAAAGAAACGATTCGAAGATTTCAATTTCATATCCAAAAAAGAACACCAAAGGGAACACAAAGCATTAGAGCTTCTAAAGCTCCTCAAATCATCAACAAAATCCCAATGCTTCATAATCAAAACGGAGAATCTGCTGCTTGATTTCTTCCACGAAAAGCTCGAAGAAATCGAATCAACCTCACGCATAAGTCCCCCTCGAATTAGAGGCTATGGTTTTGAAGAACAAGTTTTGAAATCAGCACGAGATTGGATCGAAGGCGAGGCCGGAGAAATGATGATAGTGGGATGGGAGTCGCCGGAGGGACGGAAGTTGTACATTGAGGATATGGAGATGGCCGGAGAAGAGGAGGAATCGGCGGCGGAGGTTGAAGCTGAGATTTGGTTGTCTTTGCTTAATGAGCTGTTAATTGACCTCTCATAGCTTCTTCTTTAGTTTTTCTTATTTTGTTATATTGGAAAAAATGTAGCTAATTAGCAGCCAAATCTACTTGCCTAATTTAAATATATAAAAAAAAGAAGCTTGAATTATGGTCGTGTAGTTATTTGTAATAGACATGG ATGGCGTCCACGGATTCTTCCAATTGGAGCCTCGTAGCGGCCAGGTCCAAATCCTTGATGCTCAAGGATTATCTCCTCGACGATTTCAGCTCCTGCTCCTCCAATGGCTTCCGATCCTTCCCTCGCCGCCAATGCTGCACCACCACCGTCCGATTCCTCCTCGAAATCGATCTCCGAGTAAGAAGCAGCAGATTCCATCCCCGAGCGGCTTCGAGGAAAATCGCGCTCTCCACGATCTCCACTCTCCAAAAAGCCTCCGACGCCGTCGTCCGAGCATTCAAGCACTTACCGTTGCCGTCTTCGCCGAAATTGATCCTCAGAGCGTTTCGGAAGAAATCGGATGTCGTCAAGCCGTGTAAGTCGTTTCAGGAATTTCTCGATGAGAAAGAGCCGCCGTCGCTTTCTGACCGGAACCTCGCCGTCGCCGGAACAAACTCGATCGACAGCGTCAGTTGGACGGAGAGCGAATTCACGTTGGAGATGGTTCCGTCGTCTTCGAGCGGTGTTTCCGAGATCAGTTTCAGCAAAAACGACGCCGTTAAGGATCTTAACGATTCGCCTGGAGGTGATCTCGACGGCGCAACGTTCAGAGAAGATTCCGTTCACGAATCAAGCGTCGCCGCCGCCGCCTACCGGGAAGAATCCGTTAAGGAATGGCCAAATGAAGAAGAAAAGGAACAGTTGAGTCCTGTTTCGGTGTTGGATTTTCCTTTCGAAGATGAAGATCAAGACATTTCCTCGTCTTTCAACTGCAACCTTCACCTCATCCAAGGTAAGAGGCAAAAACATTGGACGATGCGAATGGAGAAGGGAGCCGAATTGGAGCCTCTAGACTTAAAGAAACGATTCGAAGATTTCAATTTCATATCCAAAAAAGAACACCAAAGGGAACACAAAGCATTAGAGCTTCTAAAGCTCCTCAAATCATCAACAAAATCCCAATGCTTCATAATCAAAACGGAGAATCTGCTGCTTGATTTCTTCCACGAAAAGCTCGAAGAAATCGAATCAACCTCACGCATAAGTCCCCCTCGAATTAGAGGCTATGGTTTTGAAGAACAAGTTTTGAAATCAGCACGAGATTGGATCGAAGGCGAGGCCGGAGAAATGATGATAGTGGGATGGGAGTCGCCGGAGGGACGGAAGTTGTACATTGAGGATATGGAGATGGCCGGAGAAGAGGAGGAATCGGCGGCGGAGGTTGAAGCTGAGATTTGGTTGTCTTTGCTTAATGAGCTGTTAATTGACCTCTCATAG MASTDSSNWSLVAARSKSLMLKDYLLDDFSSCSSNGFRSFPRRQCCTTTVRFLLEIDLRVRSSRFHPRAASRKIALSTISTLQKASDAVVRAFKHLPLPSSPKLILRAFRKKSDVVKPCKSFQEFLDEKEPPSLSDRNLAVAGTNSIDSVSWTESEFTLEMVPSSSSGVSEISFSKNDAVKDLNDSPGGDLDGATFREDSVHESSVAAAAYREESVKEWPNEEEKEQLSPVSVLDFPFEDEDQDISSSFNCNLHLIQGKRQKHWTMRMEKGAELEPLDLKKRFEDFNFISKKEHQREHKALELLKLLKSSTKSQCFIIKTENLLLDFFHEKLEEIESTSRISPPRIRGYGFEEQVLKSARDWIEGEAGEMMIVGWESPEGRKLYIEDMEMAGEEEESAAEVEAEIWLSLLNELLIDLS Homology
BLAST of Sed0005409 vs. NCBI nr
Match: KAG6579477.1 (hypothetical protein SDJN03_23925, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 478.8 bits (1231), Expect = 4.8e-131 Identity = 298/479 (62.21%), Postives = 335/479 (69.94%), Query Frame = 0
BLAST of Sed0005409 vs. NCBI nr
Match: KAG7016946.1 (hypothetical protein SDJN02_22057, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 478.4 bits (1230), Expect = 6.3e-131 Identity = 298/480 (62.08%), Postives = 336/480 (70.00%), Query Frame = 0
BLAST of Sed0005409 vs. NCBI nr
Match: XP_022922340.1 (uncharacterized protein LOC111430353 [Cucurbita moschata]) HSP 1 Score: 475.7 bits (1223), Expect = 4.1e-130 Identity = 296/479 (61.80%), Postives = 335/479 (69.94%), Query Frame = 0
BLAST of Sed0005409 vs. NCBI nr
Match: XP_038906459.1 (uncharacterized protein LOC120092443 [Benincasa hispida]) HSP 1 Score: 474.6 bits (1220), Expect = 9.1e-130 Identity = 289/479 (60.33%), Postives = 346/479 (72.23%), Query Frame = 0
BLAST of Sed0005409 vs. NCBI nr
Match: XP_023551213.1 (uncharacterized protein LOC111809098 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-129 Identity = 295/479 (61.59%), Postives = 335/479 (69.94%), Query Frame = 0
BLAST of Sed0005409 vs. ExPASy TrEMBL
Match: A0A6J1E8H2 (uncharacterized protein LOC111430353 OS=Cucurbita moschata OX=3662 GN=LOC111430353 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 2.0e-130 Identity = 296/479 (61.80%), Postives = 335/479 (69.94%), Query Frame = 0
BLAST of Sed0005409 vs. ExPASy TrEMBL
Match: A0A0A0KP06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155580 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 5.7e-130 Identity = 294/489 (60.12%), Postives = 347/489 (70.96%), Query Frame = 0
BLAST of Sed0005409 vs. ExPASy TrEMBL
Match: A0A6J1HZ34 (uncharacterized protein LOC111468962 OS=Cucurbita maxima OX=3661 GN=LOC111468962 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 8.3e-129 Identity = 292/478 (61.09%), Postives = 335/478 (70.08%), Query Frame = 0
BLAST of Sed0005409 vs. ExPASy TrEMBL
Match: A0A6J1DTT2 (uncharacterized protein LOC111023420 OS=Momordica charantia OX=3673 GN=LOC111023420 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 4.1e-128 Identity = 291/473 (61.52%), Postives = 335/473 (70.82%), Query Frame = 0
BLAST of Sed0005409 vs. ExPASy TrEMBL
Match: A0A5A7TN51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003020 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 3.0e-126 Identity = 293/488 (60.04%), Postives = 352/488 (72.13%), Query Frame = 0
BLAST of Sed0005409 vs. TAIR 10
Match: AT4G23020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1); Has 146 Blast hits to 146 proteins in 40 species: Archae - 0; Bacteria - 16; Metazoa - 17; Fungi - 4; Plants - 67; Viruses - 20; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 1.7e-25 Identity = 142/471 (30.15%), Postives = 221/471 (46.92%), Query Frame = 0
BLAST of Sed0005409 vs. TAIR 10
Match: AT4G11780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits to 387 proteins in 92 species: Archae - 0; Bacteria - 32; Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 2.5e-24 Identity = 145/496 (29.23%), Postives = 225/496 (45.36%), Query Frame = 0
BLAST of Sed0005409 vs. TAIR 10
Match: AT4G23020.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). ) HSP 1 Score: 109.4 bits (272), Expect = 7.2e-24 Identity = 148/486 (30.45%), Postives = 226/486 (46.50%), Query Frame = 0
BLAST of Sed0005409 vs. TAIR 10
Match: AT4G00770.1 (unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 2.8e-12 Identity = 112/463 (24.19%), Postives = 188/463 (40.60%), Query Frame = 0
BLAST of Sed0005409 vs. TAIR 10
Match: AT5G03670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 4.7e-07 Identity = 64/230 (27.83%), Postives = 106/230 (46.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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