Sed0005408 (gene) Chayote v1

Overview


Name	Sed0005408
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like
Location	LG11: 24362485 .. 24363220 (+)
RNA-Seq Expression	Sed0005408
Synteny	Sed0005408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCTCCAAACTTTGCACCAAATCCTTAGTGTAACAATGTCTCATATATCAAATGAAGTTCACCATGGCCAAGCATCTTATCTGTCTGAAGACGAAGCAAATCATCTGATCAAGAAATATGACAAAAATGGAGATTCAATCCTCACCAAGGAGGAGCTGACTGATTTGATCCTTTCACAAGCATCACAACCACATGGAGCTCATATAGAAATAGTGACCAAACATCCAAAAGAGCATGCTAAGGTTGTTAAAGAGAAGGAAGTTGTCAAGCCTGAAAAGAAGCCCGCTAAGGCACCCCCTAAGCCGTATAAGATCAAGTTCGATCGGGAACAGATCAGGGAGATCTTCTTAGAGCACGATATCGACGGTGATGGTTGTCTCACTGCAAGTGAGATAACAAAGGCCTTTGGCTGCTTGGGTTCAATGCTTCCCTTCCACAAAGCTCATTTTGGTATCAAACTTGCTGATGCTGATGGAGATGGCCTTATTGATGAGGATGAGCTTGAAAAACTCGTTGATTATGCAGATAGAGTTATCAACAGGAAGTGATGTGTTTTTAAGTTATCTATTAAAATATATAATGAAAGCAAGATGTTGAATAAAGTGTTTTTTTTTTATTGGACTCCTCCTGTGGCTACTTGGTTTATTGTATTTGATCATCTTAAGTTTGTCTTTTTACTGAAGTTGTACCTTGAGAACAATTTATGAAAATGAAGAAAGAATCTGTTGTGTTCA

mRNA sequence

CCATCTCCAAACTTTGCACCAAATCCTTAGTGTAACAATGTCTCATATATCAAATGAAGTTCACCATGGCCAAGCATCTTATCTGTCTGAAGACGAAGCAAATCATCTGATCAAGAAATATGACAAAAATGGAGATTCAATCCTCACCAAGGAGGAGCTGACTGATTTGATCCTTTCACAAGCATCACAACCACATGGAGCTCATATAGAAATAGTGACCAAACATCCAAAAGAGCATGCTAAGGTTGTTAAAGAGAAGGAAGTTGTCAAGCCTGAAAAGAAGCCCGCTAAGGCACCCCCTAAGCCGTATAAGATCAAGTTCGATCGGGAACAGATCAGGGAGATCTTCTTAGAGCACGATATCGACGGTGATGGTTGTCTCACTGCAAGTGAGATAACAAAGGCCTTTGGCTGCTTGGGTTCAATGCTTCCCTTCCACAAAGCTCATTTTGGTATCAAACTTGCTGATGCTGATGGAGATGGCCTTATTGATGAGGATGAGCTTGAAAAACTCGTTGATTATGCAGATAGAGTTATCAACAGGAAGTGATGTGTTTTTAAGTTATCTATTAAAATATATAATGAAAGCAAGATGTTGAATAAAGTGTTTTTTTTTTATTGGACTCCTCCTGTGGCTACTTGGTTTATTGTATTTGATCATCTTAAGTTTGTCTTTTTACTGAAGTTGTACCTTGAGAACAATTTATGAAAATGAAGAAAGAATCTGTTGTGTTCA

Coding sequence (CDS)

ATGTCTCATATATCAAATGAAGTTCACCATGGCCAAGCATCTTATCTGTCTGAAGACGAAGCAAATCATCTGATCAAGAAATATGACAAAAATGGAGATTCAATCCTCACCAAGGAGGAGCTGACTGATTTGATCCTTTCACAAGCATCACAACCACATGGAGCTCATATAGAAATAGTGACCAAACATCCAAAAGAGCATGCTAAGGTTGTTAAAGAGAAGGAAGTTGTCAAGCCTGAAAAGAAGCCCGCTAAGGCACCCCCTAAGCCGTATAAGATCAAGTTCGATCGGGAACAGATCAGGGAGATCTTCTTAGAGCACGATATCGACGGTGATGGTTGTCTCACTGCAAGTGAGATAACAAAGGCCTTTGGCTGCTTGGGTTCAATGCTTCCCTTCCACAAAGCTCATTTTGGTATCAAACTTGCTGATGCTGATGGAGATGGCCTTATTGATGAGGATGAGCTTGAAAAACTCGTTGATTATGCAGATAGAGTTATCAACAGGAAGTGA

Protein sequence

MSHISNEVHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKEVVKPEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK

Homology

[Close]

BLAST of Sed0005408 vs. NCBI nr
Match: XP_022951880.1 (calmodulin-like [Cucurbita moschata])

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-39
Identity = 96/164 (58.54%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 8   VHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEH 67
           VHH +  Y+SE +AN+LIKKYDKNGDSILTK+ELT +IL QASQ  G   +I        
Sbjct: 8   VHHDR-PYMSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGPPKDI-------- 67

Query: 68  AKVVKEKEVVKPEKKPAKAP-PKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGC 127
                   V KP+KKPAK P  K   ++  R +IR+IFLEHDIDGDG L  SE+TKAF  
Sbjct: 68  --------VCKPKKKPAKVPEDKGLHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSF 127

Query: 128 LGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
           +GSMLP +KAH+G+  ADADGDG I E+ELEKLVDYA+RV  RK
Sbjct: 128 IGSMLPLYKAHYGLNYADADGDGRISEEELEKLVDYAERVSRRK 154

[Close]

BLAST of Sed0005408 vs. NCBI nr
Match: XP_023002889.1 (calmodulin-A-like [Cucurbita maxima])

HSP 1 Score: 172.6 bits (436), Expect = 3.0e-39
Identity = 97/164 (59.15%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 8   VHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEH 67
           VHH Q  Y+SE +AN+LIKKYDKNGDSILTK+ELT +IL QASQ  G        HPK+ 
Sbjct: 8   VHHDQ-PYMSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQG--------HPKD- 67

Query: 68  AKVVKEKEVVKPEKKPAKAP-PKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGC 127
                   V KP+K PAK P  K   ++  R +IR+IFLEHDIDGDG L  SE+TKAF  
Sbjct: 68  -------VVCKPKKNPAKVPEDKGLHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSF 127

Query: 128 LGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
           +GSMLP +KAH+G+  ADADGDG I E+EL KLVDYA+RV  RK
Sbjct: 128 IGSMLPLYKAHYGLNYADADGDGRISEEELGKLVDYAERVSRRK 154

[Close]

BLAST of Sed0005408 vs. NCBI nr
Match: XP_023537874.1 (probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-37
Identity = 91/156 (58.33%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 16  LSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKE 75
           +SE +AN+LIKKYDKNGDSILTK+ELT +IL QASQ  G   +I                
Sbjct: 1   MSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGPPKDI---------------- 60

Query: 76  VVKPEKKPAKAP-PKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFH 135
           V KP+KKPAK P  K   ++  R +IR+IFLEHDIDGDG L  SE+TKAF  +GSMLP +
Sbjct: 61  VCKPKKKPAKVPEDKGLHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLY 120

Query: 136 KAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
           KAH+G+  ADADGDG I E+EL KLVDYA+RV  RK
Sbjct: 121 KAHYGLNYADADGDGRISEEELGKLVDYAERVSRRK 140

[Close]

BLAST of Sed0005408 vs. NCBI nr
Match: XP_008445563.1 (PREDICTED: calcium-binding protein-like [Cucumis melo] >KAA0060887.1 calcium-binding protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 9   HH--GQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKE 68
           HH   Q +Y+SE EAN LIKKYDKNGDSILTK+ELT LI+ QA+  H             
Sbjct: 9   HHVPAQGNYMSEQEANTLIKKYDKNGDSILTKDELTALIMEQAASHH------------- 68

Query: 69  HAKVVKEKEVVKPEKKP-AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFG 128
           H +V  +K  V+P+K P  KA   PYK++  R+++REIFLEHDIDGDG LT SE+ KAF 
Sbjct: 69  HQQVKPQK--VEPKKVPDEKASGGPYKMRLSRDEMREIFLEHDIDGDGHLTRSELIKAFN 128

Query: 129 CLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINR 170
             GS+  F KA++ + LADADGD  I  DELEK++DYADRVINR
Sbjct: 129 MCGSLNSFSKANYALNLADADGDNYISMDELEKVLDYADRVINR 157

[Close]

BLAST of Sed0005408 vs. NCBI nr
Match: XP_038885758.1 (calmodulin-like protein 3 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 6.5e-34
Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 5   SNEVHH---GQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVT 64
           +N +H+   G  +Y+SE EAN LI+KYDKNGDSILTKEELT LI+ QA+  H        
Sbjct: 3   TNPLHYHEAGTGNYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAASHH-------- 62

Query: 65  KHPKEHAKVVKEKEVVKPEKKPAKAPPK---PYKIKFDREQIREIFLEHDIDGDGCLTAS 124
                  K  KE+ V KP+K  AK  P    P+K++  R+++REIFLEHDIDGDG LT S
Sbjct: 63  -----QLKPKKEEVVCKPQKVEAKVIPDEKGPFKMRLTRDEMREIFLEHDIDGDGHLTRS 122

Query: 125 EITKAFGCLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRV 167
           E++KA    GS++  HKA++ + LADADGDGLI+ DELEK++DY +++
Sbjct: 123 ELSKALTTCGSLISLHKANYALNLADADGDGLINVDELEKVLDYVEKL 157

[Close]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot
Match: Q9M8U1 (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 20  EANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIE-IVTKHPKEHAKVVKEKEVVK 79
           E   + + +D+N D  LT+ EL  L+ S   +P    ++ ++ K  + +  +V+  E V 
Sbjct: 20  ELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEFV- 79

Query: 80  PEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHF 139
                A   P   K  +  +Q++ IF   D DG+G +TA+E+  +   LG  L   +   
Sbjct: 80  -----ALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTG 139

Query: 140 GIKLADADGDGLIDEDELEKLVDYA 164
            IK AD DGDG ID  E  + +  A
Sbjct: 140 MIKEADRDGDGCIDFQEFVQAITSA 158

[Close]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot
Match: Q9AWK2 (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07
Identity = 43/148 (29.05%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 20  EANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKE----KE 79
           E   + + +D+NGD  LT+ EL  L+ S   +P    ++ + +    ++  + E      
Sbjct: 64  ELREIFRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIEFSEFVA 123

Query: 80  VVKPEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHK 139
           +V PE    +AP       +  +QIR +F   D DG+G +TA+E+  +   LG  L   +
Sbjct: 124 LVAPELLYDRAP-------YSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHALTVKE 183

Query: 140 AHFGIKLADADGDGLIDEDELEKLVDYA 164
               IK AD DGDG I   E  + +  A
Sbjct: 184 LTGMIKEADTDGDGRISFQEFSRAITAA 204

[Close]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot
Match: Q9LQN4 (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 10  HGQASYLSEDEANHL---IKKYDKNGDSILTKEELTDLILSQASQPHGAHIE-IVTKHPK 69
           H  +  L E++ N L    + +D+N D  LT+ EL  L+ +   +P     E ++ K   
Sbjct: 3   HKVSKKLDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADT 62

Query: 70  EHAKVVKEKEVVKPEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFG 129
           +   +V+  E V     P    P      +  EQ+  +F   D DG+G +TA+E+  +  
Sbjct: 63  KSNGLVEFPEFV-ALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMA 122

Query: 130 CLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYA 164
            LG  L   +    IK AD+DGDG I+  E  K ++ A
Sbjct: 123 KLGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 40/137 (29.20%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 20  EANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKEVVKP 79
           +   L +++D NGD  LT+ EL  L+ S   +P G  +  +      +     E +    
Sbjct: 25  QLRELFRRFDMNGDGSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSVEFD---- 84

Query: 80  EKKPAKAPPKPYKIKF-DREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHF 139
           E   A AP    +    D+ Q+ E+F   D DG+G ++A+E+ ++   LG  L F +   
Sbjct: 85  ELAAAIAPVLTTQTHLVDQAQLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEELTR 144

Query: 140 GIKLADADGDGLIDEDE 156
            ++ AD DGDG+I   E
Sbjct: 145 MMRDADTDGDGVISFKE 157

[Close]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.0e-05
Identity = 42/150 (28.00%), Postives = 67/150 (44.67%), Query Frame = 0


Query: 24  LIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKEVVKPEKKP 83
           +  ++D + D  LT  EL  L+ S   +P G  I ++      +     E +    E   
Sbjct: 11  IFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD----ELVG 70

Query: 84  AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHFGIKLA 143
              P    ++  + EQ+ EIF   D DG+G ++A+E+  A   +G  L + +    IK A
Sbjct: 71  TILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEA 130

Query: 144 DADGDGLIDEDELEKL-----VDYADRVIN 169
           D +GDG+I   E   +     VDY    IN
Sbjct: 131 DTNGDGVISFGEFASIMAKSAVDYFGLKIN 156

[Close]

BLAST of Sed0005408 vs. ExPASy TrEMBL
Match: A0A6J1GK54 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454617 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 96/164 (58.54%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 8   VHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEH 67
           VHH +  Y+SE +AN+LIKKYDKNGDSILTK+ELT +IL QASQ  G   +I        
Sbjct: 8   VHHDR-PYMSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGPPKDI-------- 67

Query: 68  AKVVKEKEVVKPEKKPAKAP-PKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGC 127
                   V KP+KKPAK P  K   ++  R +IR+IFLEHDIDGDG L  SE+TKAF  
Sbjct: 68  --------VCKPKKKPAKVPEDKGLHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSF 127

Query: 128 LGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
           +GSMLP +KAH+G+  ADADGDG I E+ELEKLVDYA+RV  RK
Sbjct: 128 IGSMLPLYKAHYGLNYADADGDGRISEEELEKLVDYAERVSRRK 154

[Close]

BLAST of Sed0005408 vs. ExPASy TrEMBL
Match: A0A6J1KRR4 (calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111496627 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 97/164 (59.15%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 8   VHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEH 67
           VHH Q  Y+SE +AN+LIKKYDKNGDSILTK+ELT +IL QASQ  G        HPK+ 
Sbjct: 8   VHHDQ-PYMSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQG--------HPKD- 67

Query: 68  AKVVKEKEVVKPEKKPAKAP-PKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGC 127
                   V KP+K PAK P  K   ++  R +IR+IFLEHDIDGDG L  SE+TKAF  
Sbjct: 68  -------VVCKPKKNPAKVPEDKGLHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSF 127

Query: 128 LGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
           +GSMLP +KAH+G+  ADADGDG I E+EL KLVDYA+RV  RK
Sbjct: 128 IGSMLPLYKAHYGLNYADADGDGRISEEELGKLVDYAERVSRRK 154

[Close]

BLAST of Sed0005408 vs. ExPASy TrEMBL
Match: A0A5A7V211 (Calcium-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00200 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 9.8e-36
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 9   HH--GQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKE 68
           HH   Q +Y+SE EAN LIKKYDKNGDSILTK+ELT LI+ QA+  H             
Sbjct: 9   HHVPAQGNYMSEQEANTLIKKYDKNGDSILTKDELTALIMEQAASHH------------- 68

Query: 69  HAKVVKEKEVVKPEKKP-AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFG 128
           H +V  +K  V+P+K P  KA   PYK++  R+++REIFLEHDIDGDG LT SE+ KAF 
Sbjct: 69  HQQVKPQK--VEPKKVPDEKASGGPYKMRLSRDEMREIFLEHDIDGDGHLTRSELIKAFN 128

Query: 129 CLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINR 170
             GS+  F KA++ + LADADGD  I  DELEK++DYADRVINR
Sbjct: 129 MCGSLNSFSKANYALNLADADGDNYISMDELEKVLDYADRVINR 157

[Close]

BLAST of Sed0005408 vs. ExPASy TrEMBL
Match: A0A1S3BDQ7 (calcium-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103488543 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 9.8e-36
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 9   HH--GQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKE 68
           HH   Q +Y+SE EAN LIKKYDKNGDSILTK+ELT LI+ QA+  H             
Sbjct: 9   HHVPAQGNYMSEQEANTLIKKYDKNGDSILTKDELTALIMEQAASHH------------- 68

Query: 69  HAKVVKEKEVVKPEKKP-AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFG 128
           H +V  +K  V+P+K P  KA   PYK++  R+++REIFLEHDIDGDG LT SE+ KAF 
Sbjct: 69  HQQVKPQK--VEPKKVPDEKASGGPYKMRLSRDEMREIFLEHDIDGDGHLTRSELIKAFN 128

Query: 129 CLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINR 170
             GS+  F KA++ + LADADGD  I  DELEK++DYADRVINR
Sbjct: 129 MCGSLNSFSKANYALNLADADGDNYISMDELEKVLDYADRVINR 157

[Close]

BLAST of Sed0005408 vs. ExPASy TrEMBL
Match: A0A6J1CSH1 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111013915 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.4e-34
Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 1   MSHISNEVHHGQASYLSEDEANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIV 60
           MS  S ++H GQ S+++E EA+ +I+KYDKNGDSI+TKEE+ D  ++  +        +V
Sbjct: 1   MSSDSLQLHRGQ-SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKA-------NVV 60

Query: 61  TKHPKEHAKVVKEKEVVKPEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEI 120
            K  K  A+V  EK          KAP    KIKF R QI+EIF+EHDIDGDGCL+ SE+
Sbjct: 61  PKAQKVPARVANEK----------KAP----KIKFSRSQIKEIFMEHDIDGDGCLSVSEL 120

Query: 121 TKAFGCLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYADRVINRK 171
            KAF  LGS++P +KAH+G+  AD DGDGLI E+EL+KLVDYA++  +RK
Sbjct: 121 IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKGSDRK 148

[Close]

BLAST of Sed0005408 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-09
Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 20  EANHLIKKYDKNGDSILTKEELTDLILSQASQPHGAHIE-IVTKHPKEHAKVVKEKEVVK 79
           E   + + +D+N D  LT+ EL  L+ S   +P    ++ ++ K  + +  +V+  E V 
Sbjct: 20  ELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEFV- 79

Query: 80  PEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHF 139
                A   P   K  +  +Q++ IF   D DG+G +TA+E+  +   LG  L   +   
Sbjct: 80  -----ALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTG 139

Query: 140 GIKLADADGDGLIDEDELEKLVDYA 164
            IK AD DGDG ID  E  + +  A
Sbjct: 140 MIKEADRDGDGCIDFQEFVQAITSA 158

[Close]

BLAST of Sed0005408 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 10  HGQASYLSEDEANHL---IKKYDKNGDSILTKEELTDLILSQASQPHGAHIE-IVTKHPK 69
           H  +  L E++ N L    + +D+N D  LT+ EL  L+ +   +P     E ++ K   
Sbjct: 3   HKVSKKLDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADT 62

Query: 70  EHAKVVKEKEVVKPEKKPAKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFG 129
           +   +V+  E V     P    P      +  EQ+  +F   D DG+G +TA+E+  +  
Sbjct: 63  KSNGLVEFPEFV-ALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMA 122

Query: 130 CLGSMLPFHKAHFGIKLADADGDGLIDEDELEKLVDYA 164
            LG  L   +    IK AD+DGDG I+  E  K ++ A
Sbjct: 123 KLGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of Sed0005408 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-06
Identity = 42/150 (28.00%), Postives = 67/150 (44.67%), Query Frame = 0


Query: 24  LIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKEVVKPEKKP 83
           +  ++D + D  LT  EL  L+ S   +P G  I ++      +     E +    E   
Sbjct: 11  IFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD----ELVG 70

Query: 84  AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHFGIKLA 143
              P    ++  + EQ+ EIF   D DG+G ++A+E+  A   +G  L + +    IK A
Sbjct: 71  TILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEA 130

Query: 144 DADGDGLIDEDELEKL-----VDYADRVIN 169
           D +GDG+I   E   +     VDY    IN
Sbjct: 131 DTNGDGVISFGEFASIMAKSAVDYFGLKIN 156

[Close]

BLAST of Sed0005408 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-06
Identity = 35/137 (25.55%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 24  LIKKYDKNGDSILTKEELTDLILSQASQPHGAHIEIVTKHPKEHAKVVKEKEVVKPEKKP 83
           +  ++D + D  LT+ EL  L+ S   +P G  I ++      +     E +    E   
Sbjct: 16  IFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNGNGSVEFD----ELVV 75

Query: 84  AKAPPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHFGIKLA 143
           A  P    ++  ++EQ+ E+F   D DG+G +TA+E+  +   +G  L + +    +  A
Sbjct: 76  AILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEA 135

Query: 144 DADGDGLIDEDELEKLV 161
           D++GDG+I  +E   ++
Sbjct: 136 DSNGDGVISFNEFSHIM 148

[Close]

BLAST of Sed0005408 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 48.1 bits (113), Expect = 8.0e-06
Identity = 38/134 (28.36%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 28  YDKNGDSILTKEELTDLILSQASQPHGAHI-EIVTKHPKEHAKVVKEKEVVKPEKKPAKA 87
           +DK+GD  +T EEL  +I S    P    + +I+T+   +    ++  E +    K  + 
Sbjct: 21  FDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEFLNLMAKKLQE 80

Query: 88  PPKPYKIKFDREQIREIFLEHDIDGDGCLTASEITKAFGCLGSMLPFHKAHFGIKLADAD 147
                      E+++E F   D D +G ++ASE++     LG  L   +    IK AD D
Sbjct: 81  SDA-------EEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLD 140

Query: 148 GDGLIDEDELEKLV 161
           GDG ++ DE  K++
Sbjct: 141 GDGQVNYDEFVKMM 147

The following BLAST results are available for this feature:

BLAST of Sed0005408 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951880.1	2.3e-39	58.54	calmodulin-like [Cucurbita moschata]	[more]
XP_023002889.1	3.0e-39	59.15	calmodulin-A-like [Cucurbita maxima]	[more]
XP_023537874.1	2.8e-37	58.33	probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]	[more]
XP_008445563.1	2.0e-35	56.10	PREDICTED: calcium-binding protein-like [Cucumis melo] >KAA0060887.1 calcium-bin...	[more]
XP_038885758.1	6.5e-34	51.19	calmodulin-like protein 3 [Benincasa hispida]	[more]

BLAST of Sed0005408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8U1	1.1e-07	29.66	Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 ...	[more]
Q9AWK2	4.1e-07	29.05	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9LQN4	2.0e-06	29.11	Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 ...	[more]
Q6L5F4	1.3e-05	29.20	Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FZ75	5.0e-05	28.00	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]

BLAST of Sed0005408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GK54	1.1e-39	58.54	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454617 PE=4 SV=1	[more]
A0A6J1KRR4	1.5e-39	59.15	calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111496627 PE=4 SV=1	[more]
A0A5A7V211	9.8e-36	56.10	Calcium-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BDQ7	9.8e-36	56.10	calcium-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103488543 PE=4 SV=1	[more]
A0A6J1CSH1	5.4e-34	51.18	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Sed0005408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03000.1	7.7e-09	29.66	EF hand calcium-binding protein family	[more]
AT1G32250.1	1.5e-07	29.11	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	3.6e-06	28.00	EF hand calcium-binding protein family	[more]
AT3G25600.1	3.6e-06	25.55	Calcium-binding EF-hand family protein	[more]
AT4G14640.1	8.0e-06	28.36	calmodulin 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 20..48 e-value: 1.6 score: 16.2 coord: 135..163 e-value: 15.0 score: 8.3 coord: 99..127 e-value: 0.92 score: 18.0
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 142..160 e-value: 8.4E-4 score: 18.7
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 100..127 e-value: 3.4E-5 score: 23.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 131..166 score: 8.655371
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 16..51 score: 10.831213
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 95..130 score: 12.560727
None	No IPR available	GENE3D	1.10.238.10		coord: 17..164 e-value: 9.0E-18 score: 66.8
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 89..165
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 89..165
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 108..120
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 144..156
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 15..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005408.1	Sed0005408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding