Sed0005383 (gene) Chayote v1

Overview


Name	Sed0005383
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Mental retardation GTPase activating protein
Location	LG06: 38506102 .. 38508697 (-)
RNA-Seq Expression	Sed0005383
Synteny	Sed0005383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACCGGAGTTGAATCTCCGTGAATGGGCGGCTCAGGCCATTTCCCGGCGGTTCTCCAGGGTACCCTTTTCCAGGTTTTTCTTCTCTTTTTCTCTGGCCATGGATTCTTCTCTTCTTTCGCTTATCTGGGTTGGGTTTTGGTTTTGCCACTTATTCCTTCACTATTGCCATCAAGGCTCAGTACTTTATTTCCAATTCGCTTAACAGCTGGGAATGTTTTTCTCTTGATGGTTTTACTTTGAATTCCAAGTGGAATGAAGTCGAGAAGTATATTCGTAATCCGCTTTCCCTTGTTGTTATTTTCAGAGAAGAAAGTGGATGCCAATGCCATGACCAGAGAGGTGGGAAATGAAAGTACATCAACGATCGTTGGTTCGGATAGTCCTAGTCCTGCTTCGACGCCTCCCATCCCGGAGAGAGCTTTAAAGAGATGCGCATTCGAACAAGACTCGCCTGGTTCCAACTCTAAAGTTACTTCCCAGATAGAGGTATTGCCACTTCCAATCTTTTGTTATATTCTTCTCATATGAAAACAGCAATCAACAACTGATCGAGGAATAAAGAAACGTGAGAGAAGAAGAACAGATAAACGGAAATTTACGTGGTTCACTAACGTTGTAGCTAGTTCACAGGCTGAGAGGGAGAACAATTTTATTAAGGAGAGGCGAATTACAGAGGTACAGAATGAACATCATAATACGGCTAGGGTTTAATTCGATTTTATGTATGCACTCTAATTAAACCCTATTACAGAGGACGTAAACGTAAAATAGAATGCGGATGCGTAGATGCACTGTGGAAATAGAATGTTATGCGAAGTGCAGTTAACGGATGCAGAATGCAACGAGGAAAGATGGAATGCATTCGTGCAACAGAATGCAGAAAGTGGAAATCCGTTTTCATAACAGGGGCATTTCCTCCGTACCCCCACTCGCTAACCGAGCAGCGAGACCCCGACTACCAATCGCAGGGTGTCAATGCGTTCAAGGCATAATACAACATCTTCCGATGCTTTTAGTTTGATATCAACCATGTCTGAATGGAAAATCTGTATGTTCAATACAGAGCTAACCGGTAATTAGGAGTTGTTAAATCACCCCCAAGTCAATCCCCACTAAATTCAAATTTTAAGAGGATAGGCCGTGATCAATAGAATGTTTTAAATATATTCTTTCCTCACTGATAAGCTTATAATTTACTCGGAAAACCATCAAGTTAGTTGTTATAACATTGGAGAAGAAATGTCATCCAAGGAGTTTGCATAGTGCTGTATTAAATACTACCAAATCCTCAAAAACCCGGATTAGGGGGTTGTTATTTGACAGGAAAATAGATGTCAATTTGTCACAATGAATTTTAAAAGACTTAGTTTGAGCAAACATTTGAAACAACTTTGCTGGAGATCAAAACATAGGCTATGCAAGTGAGTTTGTGAAGTTGTAAATTTATCAGCCTAATTTATTAGTGAAGCTTTTTGGCCAATCTATTTCTATCCTTCTCCCAAACAATTTTATACTACCGTACTAAATCTTTACCATACCATATCACCCTGCAAAATATTTACCGTGCATCCAAACACCCCTTTTTTATATGTTTTTCTCCATATTGGTCTACTTTCCAGCTCATACACTTGTGTTTGTCTCTCTATACTGTAGAAACATATTTTTTCTACAAATAAACTGATAATATTCAGATCTCAGAAAACCTTCCCTTGATCTTTCAGAAGCAAACAAAAATTCAGTTCTTAGGTGTTGAGAGAAACATTGTCACAACACTTGAATTGCCACATAAATTTCAAATTTCCCTTCTTGAACTATGTATTTGTTCTACCTTTCCTTCTACTTTAGTGGAGCCCATGCAAGATTCTCCTTTACTTATTCCTTTGTTTTCTTTTTCATCAAGAATCTCCTCTCTCTACATATTTCTTGAGATTCTCATTCAAAATTCAGTTGCAGTTATCTATTTTTTCCTCTTTTTTCCTTTATGGAAGTTGAGGACCATTTCCCTCTGCCATTTACTTTCTGGTAAGCTCAAGTGAAATTAGAGGTTAATAATGTATGATTCCTCCTGTATTTCTCAAGTGAAAGTGCAATCTGAATTCTGACCAATTACAAGTACTCAAATAATTTTGGAAATGGGCCATGTGGGTATTTCCTGAATTAACAAACAGCTTTTAGAAGACAACATTGCCCCCCCAAACTTAGACAAAATATGTATTCCAGTTTCATTTTTTTCGTCTTCTTAATAAAACATTCTCCCTTCTGCCCGTAGAGTAGCTAACACGCAGTTAATGAACCACGTAAATTCTGTCTTCTTCTTTTTACGTTTTTTCTTGTATTTTCGATTGATTGTTGATTGCTGTGTTTTTATCACAGAAACTTGATTTGAATGCAGGTGATAAAAAGAGAATTGGAAGAGGAGAGAGCAAAAGAAAGAAGAAGAAAAGGAAGAACAAAGAGAAACAATGGCAGAAGAGAAGTGGAAGAAGCAAGGAAGATGCATGTCATGGATGATGAAGAAGAAGCACAAAGAGAAACAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTAAAACTAAGAAGGTGCTGA

mRNA sequence

ATGGATGAACCGGAGTTGAATCTCCGTGAATGGGCGGCTCAGGCCATTTCCCGGCGGTTCTCCAGGGTACCCTTTTCCAGGTTTTTCTTCTCTTTTTCTCTGGCCATGGATTCTTCTCTTCTTTCGCTTATCTGGGCTCAGTACTTTATTTCCAATTCGCTTAACAGCTGGGAATGTTTTTCTCTTGATGGTTTTACTTTGAATTCCAAGTGGAATGAAGTCGAGAAGTATATTCAGAAGAAAGTGGATGCCAATGCCATGACCAGAGAGGTGGGAAATGAAAGTACATCAACGATCGTTGGTTCGGATAGTCCTAGTCCTGCTTCGACGCCTCCCATCCCGGAGAGAGCTTTAAAGAGATGCGCATTCGAACAAGACTCGCCTGGTTCCAACTCTAAAGTTACTTCCCAGATAGAGAGGAGAGAGCAAAAGAAAGAAGAAGAAAAGGAAGAACAAAGAGAAACAATGGCAGAAGAGAAGTGGAAGAAGCAAGGAAGATGCATGTCATGGATGATGAAGAAGAAGCACAAAGAGAAACAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTAAAACTAAGAAGGTGCTGA

Coding sequence (CDS)

ATGGATGAACCGGAGTTGAATCTCCGTGAATGGGCGGCTCAGGCCATTTCCCGGCGGTTCTCCAGGGTACCCTTTTCCAGGTTTTTCTTCTCTTTTTCTCTGGCCATGGATTCTTCTCTTCTTTCGCTTATCTGGGCTCAGTACTTTATTTCCAATTCGCTTAACAGCTGGGAATGTTTTTCTCTTGATGGTTTTACTTTGAATTCCAAGTGGAATGAAGTCGAGAAGTATATTCAGAAGAAAGTGGATGCCAATGCCATGACCAGAGAGGTGGGAAATGAAAGTACATCAACGATCGTTGGTTCGGATAGTCCTAGTCCTGCTTCGACGCCTCCCATCCCGGAGAGAGCTTTAAAGAGATGCGCATTCGAACAAGACTCGCCTGGTTCCAACTCTAAAGTTACTTCCCAGATAGAGAGGAGAGAGCAAAAGAAAGAAGAAGAAAAGGAAGAACAAAGAGAAACAATGGCAGAAGAGAAGTGGAAGAAGCAAGGAAGATGCATGTCATGGATGATGAAGAAGAAGCACAAAGAGAAACAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTAAAACTAAGAAGGTGCTGA

Protein sequence

MDEPELNLREWAAQAISRRFSRVPFSRFFFSFSLAMDSSLLSLIWAQYFISNSLNSWECFSLDGFTLNSKWNEVEKYIQKKVDANAMTREVGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIERREQKKEEEKEEQRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

Homology

[Close]

BLAST of Sed0005383 vs. NCBI nr
Match: XP_022935276.1 (uncharacterized protein LOC111442214 [Cucurbita moschata] >KAG6581165.1 hypothetical protein SDJN03_21167, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017901.1 hypothetical protein SDJN02_19767 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.2 bits (417), Expect = 5.5e-37
Identity = 132/288 (45.83%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 2   DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------ 61
           DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            
Sbjct: 12  DEPEFSLREWAAKAKLNRDPTISRRFSG-SYIRSFREDARSFRSNITSTASSPGYPFGDE 71

Query: 62  LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI---------------- 121
           +  A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI                
Sbjct: 72  IDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAK 131

Query: 122 ----------------------------------------------QKKVDANAMTREVG 181
                                                          KKVDANAMTR+VG
Sbjct: 132 SLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPDKKVDANAMTRDVG 191

Query: 182 NESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKE 197
            +ST T VGS SPSPASTPPI +RALKRC  E++SP SNSKVT + E  +RE K+E  KE
Sbjct: 192 TQSTPTNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMKEERAKE 251

[Close]

BLAST of Sed0005383 vs. NCBI nr
Match: XP_038876978.1 (uncharacterized protein LOC120069317 [Benincasa hispida])

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-36
Identity = 130/290 (44.83%), Postives = 151/290 (52.07%), Query Frame = 0


Query: 2   DEPELNLREWAAQ-------AISRRFSRVPFSRF---------------------FFSFS 61
           DEPE +LREWAA+       AISRRFS      F                      + F 
Sbjct: 12  DEPEFSLREWAAKAKINRDPAISRRFSGSYIRSFREDARSFRSNITTITSTASSPGYPFG 71

Query: 62  LAMDSSLLSLIWA-QYFISNSLNSWECFSLDGFTLNSKWNEVEKYI-------------- 121
             +D +  S   A +   + SLNSWECFSLDGFTLNSKWNE EKYI              
Sbjct: 72  DEIDPATYSFTSAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLS 131

Query: 122 ------------------------------------------------QKKVDANAMTRE 181
                                                           +KKVDANAMTR+
Sbjct: 132 AKSLSGRSFRNLANRIAISAPLVYSNHSQQTQTKPCSITQVVQKLPIPEKKVDANAMTRD 191

Query: 182 VGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEE 197
           VG +ST   VGS+SPSPASTPPI ERALKRC  E+DSP SNSK+T + E  +RE K+E  
Sbjct: 192 VGTQSTPPNVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKITPETEVIKREMKEERA 251

[Close]

BLAST of Sed0005383 vs. NCBI nr
Match: XP_023526566.1 (uncharacterized protein LOC111790032 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-36
Identity = 131/288 (45.49%), Postives = 154/288 (53.47%), Query Frame = 0


Query: 2   DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------ 61
           DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            
Sbjct: 12  DEPEFSLREWAAKAKLNRDPTISRRFSG-SYIRSFREDARSFRSNITSTASSPGYPFGDE 71

Query: 62  LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI---------------- 121
           +  A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI                
Sbjct: 72  IDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAK 131

Query: 122 ----------------------------------------------QKKVDANAMTREVG 181
                                                          KKVDANAMTR+VG
Sbjct: 132 SLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPDKKVDANAMTRDVG 191

Query: 182 NESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKE 197
            +ST   VGS SPSPASTPPI +RALKRC  E++SP SNSKVT + E  +RE K+E  KE
Sbjct: 192 TQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMKEERAKE 251

[Close]

BLAST of Sed0005383 vs. NCBI nr
Match: XP_022983933.1 (uncharacterized protein LOC111482408 [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 8.0e-36
Identity = 130/287 (45.30%), Postives = 153/287 (53.31%), Query Frame = 0


Query: 2   DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------ 61
           DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            
Sbjct: 12  DEPEFSLREWAAKAKLNHNPTISRRFSG-SYIRSFREDARSFRSNITSTASSPGYPFGDE 71

Query: 62  LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI---------------- 121
           +  A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI                
Sbjct: 72  IDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAK 131

Query: 122 ----------------------------------------------QKKVDANAMTREVG 181
                                                          KKVDANAMTR+VG
Sbjct: 132 SLSGRSFRNLANRIAVSAPLVYSNHPQQIQTKPCSITQVVQKLPISDKKVDANAMTRDVG 191

Query: 182 NESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKE 197
            +ST   VGS SPSPASTPPI +RALKRC  E++SP SNSKVT + E  +RE ++E  KE
Sbjct: 192 TQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMEEERAKE 251

[Close]

BLAST of Sed0005383 vs. NCBI nr
Match: XP_004145633.1 (uncharacterized protein LOC101205687 [Cucumis sativus] >KGN57720.1 hypothetical protein Csa_010387 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-35
Identity = 126/291 (43.30%), Postives = 157/291 (53.95%), Query Frame = 0


Query: 2   DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW--------- 61
           DEPE +LREWAA+       A SRRFS   + R F   + +  S++ ++           
Sbjct: 12  DEPEFSLREWAAKAKITRDPATSRRFSG-SYIRSFREDARSFRSNITTITSTASSPGYPF 71

Query: 62  ------AQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI------------- 121
                 A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI             
Sbjct: 72  GDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECL 131

Query: 122 -------------------------------------------------QKKVDANAMTR 181
                                                            +K++DANA+TR
Sbjct: 132 SAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPEKQLDANALTR 191

Query: 182 EVGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEE 197
           +VG +ST T VGS SPSPASTPPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E 
Sbjct: 192 DVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTEVIKREMKEER 251

[Close]

BLAST of Sed0005383 vs. ExPASy TrEMBL
Match: A0A6J1F439 (uncharacterized protein LOC111442214 OS=Cucurbita moschata OX=3662 GN=LOC111442214 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.7e-37
Identity = 132/288 (45.83%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 2   DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------ 61
           DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            
Sbjct: 12  DEPEFSLREWAAKAKLNRDPTISRRFSG-SYIRSFREDARSFRSNITSTASSPGYPFGDE 71

Query: 62  LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI---------------- 121
           +  A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI                
Sbjct: 72  IDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAK 131

Query: 122 ----------------------------------------------QKKVDANAMTREVG 181
                                                          KKVDANAMTR+VG
Sbjct: 132 SLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPDKKVDANAMTRDVG 191

Query: 182 NESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKE 197
            +ST T VGS SPSPASTPPI +RALKRC  E++SP SNSKVT + E  +RE K+E  KE
Sbjct: 192 TQSTPTNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMKEERAKE 251

[Close]

BLAST of Sed0005383 vs. ExPASy TrEMBL
Match: A0A6J1J941 (uncharacterized protein LOC111482408 OS=Cucurbita maxima OX=3661 GN=LOC111482408 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.9e-36
Identity = 130/287 (45.30%), Postives = 153/287 (53.31%), Query Frame = 0


Query: 2   DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------ 61
           DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            
Sbjct: 12  DEPEFSLREWAAKAKLNHNPTISRRFSG-SYIRSFREDARSFRSNITSTASSPGYPFGDE 71

Query: 62  LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI---------------- 121
           +  A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI                
Sbjct: 72  IDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAK 131

Query: 122 ----------------------------------------------QKKVDANAMTREVG 181
                                                          KKVDANAMTR+VG
Sbjct: 132 SLSGRSFRNLANRIAVSAPLVYSNHPQQIQTKPCSITQVVQKLPISDKKVDANAMTRDVG 191

Query: 182 NESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKE 197
            +ST   VGS SPSPASTPPI +RALKRC  E++SP SNSKVT + E  +RE ++E  KE
Sbjct: 192 TQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMEEERAKE 251

[Close]

BLAST of Sed0005383 vs. ExPASy TrEMBL
Match: A0A0A0L6V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259700 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.0e-36
Identity = 126/291 (43.30%), Postives = 157/291 (53.95%), Query Frame = 0


Query: 2   DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW--------- 61
           DEPE +LREWAA+       A SRRFS   + R F   + +  S++ ++           
Sbjct: 12  DEPEFSLREWAAKAKITRDPATSRRFSG-SYIRSFREDARSFRSNITTITSTASSPGYPF 71

Query: 62  ------AQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI------------- 121
                 A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI             
Sbjct: 72  GDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECL 131

Query: 122 -------------------------------------------------QKKVDANAMTR 181
                                                            +K++DANA+TR
Sbjct: 132 SAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPEKQLDANALTR 191

Query: 182 EVGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEE 197
           +VG +ST T VGS SPSPASTPPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E 
Sbjct: 192 DVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTEVIKREMKEER 251

[Close]

BLAST of Sed0005383 vs. ExPASy TrEMBL
Match: A0A1S3CFH4 (uncharacterized protein LOC103500139 OS=Cucumis melo OX=3656 GN=LOC103500139 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 8.6e-36
Identity = 126/290 (43.45%), Postives = 157/290 (54.14%), Query Frame = 0


Query: 3   EPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------- 62
           EPE +LREWAA+       A SRRFS   + R F   + +  S++ ++            
Sbjct: 13  EPEFSLREWAAKAKITRDPATSRRFSG-SYIRSFREDARSFRSNITTITSTASSPGYPFG 72

Query: 63  -----AQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI-------------- 122
                A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI              
Sbjct: 73  DEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLS 132

Query: 123 ------------------------------------------------QKKVDANAMTRE 182
                                                           +K+VDANA+TR+
Sbjct: 133 AKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPEKQVDANALTRD 192

Query: 183 VGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEE 197
           VG +ST T VGS+SPSPASTPPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E  
Sbjct: 193 VGTQSTPTNVGSNSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTEVIKREMKEERA 252

[Close]

BLAST of Sed0005383 vs. ExPASy TrEMBL
Match: A0A6J1KAU1 (uncharacterized protein LOC111492625 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492625 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 127/294 (43.20%), Postives = 155/294 (52.72%), Query Frame = 0


Query: 2   DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW--------- 61
           DEPE +LREWAA+       AISRRFS   + R F   + ++ S++ ++           
Sbjct: 12  DEPEFSLREWAAKAKIGRDPAISRRFSG-SYIRSFREDARSLRSNVTAVTSTASSPGYPF 71

Query: 62  ------AQYFISN--------SLNSWECFSLDGFTLNSKWNEVEKYI------------- 121
                 A Y  +N        SLNSWECFSLDGFTLNSKWNE EKYI             
Sbjct: 72  GDEINPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECL 131

Query: 122 ------------------------------------------------QKKVDANAMTRE 181
                                                           + KV+AN MTR+
Sbjct: 132 SAKSLSGRSFKNLANRIAISAPLVYSNHSQIGTKPYSISQLVQKLPIPENKVEANGMTRD 191

Query: 182 VGNESTSTIVGSDSPSPASTPPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEE 197
           VG +ST  +VGS+SPSPASTPPI ERALKRC  E+DSP SNSK T + E  RRE  +E  
Sbjct: 192 VGTQSTPPVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEVIRRELNEERA 251

The following BLAST results are available for this feature:

BLAST of Sed0005383 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935276.1	5.5e-37	45.83	uncharacterized protein LOC111442214 [Cucurbita moschata] >KAG6581165.1 hypothet...	[more]
XP_038876978.1	1.2e-36	44.83	uncharacterized protein LOC120069317 [Benincasa hispida]	[more]
XP_023526566.1	2.7e-36	45.49	uncharacterized protein LOC111790032 [Cucurbita pepo subsp. pepo]	[more]
XP_022983933.1	8.0e-36	45.30	uncharacterized protein LOC111482408 [Cucurbita maxima]	[more]
XP_004145633.1	1.0e-35	43.30	uncharacterized protein LOC101205687 [Cucumis sativus] >KGN57720.1 hypothetical ...	[more]

BLAST of Sed0005383 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F439	2.7e-37	45.83	uncharacterized protein LOC111442214 OS=Cucurbita moschata OX=3662 GN=LOC1114422...	[more]
A0A6J1J941	3.9e-36	45.30	uncharacterized protein LOC111482408 OS=Cucurbita maxima OX=3661 GN=LOC111482408...	[more]
A0A0A0L6V9	5.0e-36	43.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259700 PE=4 SV=1	[more]
A0A1S3CFH4	8.6e-36	43.45	uncharacterized protein LOC103500139 OS=Cucumis melo OX=3656 GN=LOC103500139 PE=...	[more]
A0A6J1KAU1	1.9e-35	43.20	uncharacterized protein LOC111492625 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0005383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..196
None	No IPR available	PANTHER	PTHR36748	MENTAL RETARDATION GTPASE ACTIVATING PROTEIN	coord: 84..188 coord: 54..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005383.1	Sed0005383.1	mRNA