Homology
BLAST of Sed0005379 vs. NCBI nr
Match:
XP_022947552.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata])
HSP 1 Score: 991.1 bits (2561), Expect = 4.0e-285
Identity = 497/583 (85.25%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MND F S PR P A A A KSDPRI HA AIKSPATDRSVYNNLITLY K+NLL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR+P+FPNQRT ASL KTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALS+FREM+ASDVA TMYSVSGALRAAADLAA EQCRVLHG AVV G+D
Sbjct: 181 VGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQT+LIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEHYTCLIDA GRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRAG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALSSTARWEEVAVVRK+M ERQVKKKSGRSWIEVRG+VHVFLAGDRNHERTEEIY KL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQ FKYASRVL REI+VRDVNRYHRFL G CTC D+W
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of Sed0005379 vs. NCBI nr
Match:
XP_022974509.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima])
HSP 1 Score: 991.1 bits (2561), Expect = 4.0e-285
Identity = 496/583 (85.08%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MND F PR P A A A KSDPRI HA AIKSPATDRSVYNNLITLY K+NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR+P+FPNQRT ASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALSMFREM+AS+VA TMYSVSGALRAAADLAA EQCRVLHG AV TG+D
Sbjct: 181 VGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQTALIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEH+TCLIDA GR G
Sbjct: 301 MGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRDG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALSSTARWEEVA+VRK+M ERQVKKKSGRSWIEVRG+VHVFLAGDRNHERTEEIY KL+
Sbjct: 421 ALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQ FKYASRVLRREI+VRDVNRYHRFL G CTC D+W
Sbjct: 541 RICRDCHQVFKYASRVLRREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of Sed0005379 vs. NCBI nr
Match:
KAG6597338.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 989.2 bits (2556), Expect = 1.5e-284
Identity = 497/584 (85.10%), Postives = 527/584 (90.24%), Query Frame = 0
Query: 1 MNDFFYSISDSPR-PPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNL 60
MND F S PR PP AA A KSDPRI HA AIKSPATDRSVYNNLITLY K+NL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCAS 120
LHYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR+P+FPNQRT ASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSAL 180
LPC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGM 240
VVG+AQNAQS+DALS+FREM+AS+VA TMYSVSGALRAAADLAA EQCRVLHG AVV G+
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFN 300
D DVIVQTALIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRA 360
SM S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEH+TCLIDA GRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
Query: 361 GELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVA 420
G+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLK 480
NALSSTARWEEVAVVRK+M ERQVKKKSGRSWIEVRG+VHVFLAGDRNHERTEEIY KL+
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 ELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKN 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
LRICRDCHQ FKYASRVL REI+ RDVNRYHRFL G CTC D+W
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARDVNRYHRFLNGSCTCGDIW 584
BLAST of Sed0005379 vs. NCBI nr
Match:
XP_023540846.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 984.2 bits (2543), Expect = 4.9e-283
Identity = 493/583 (84.56%), Postives = 524/583 (89.88%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MND F PR P A A A KSDPRI HA AIKSPATDRSVYNNLITLY ++NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGRANLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR P+FPNQRT ASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRCPSFPNQRTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALS+FREM+AS+VA TMYSVSGALRAAADLAA EQCRVLHG AVV G+D
Sbjct: 181 VGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQT+LIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEH+TCLIDA GRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALSSTARWEEVAVVRK+M ERQVKKKSGRSWIEVRG+VH FLAGDRNHERTEEIY KL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHAFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQ FKYASRVL REI+VRDVNRYHRFL G CTC D+W
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of Sed0005379 vs. NCBI nr
Match:
XP_022157968.1 (pentatricopeptide repeat-containing protein At4g33170-like [Momordica charantia])
HSP 1 Score: 974.5 bits (2518), Expect = 3.9e-280
Identity = 491/583 (84.22%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MNDFF +P PP A AA KSDPRI HA AIKSPAT RSVYNNLITLYSKS+ L
Sbjct: 1 MNDFF-DPDPTPAPPPAPPLAA-AGKSDPRIVHAQAIKSPATHRSVYNNLITLYSKSSFL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLF QIPFPNVVSWTALISAHSN LSLRHF+ MLR+PAFPNQRT ASLFKTCASL
Sbjct: 61 HYSVRLFHQIPFPNVVSWTALISAHSNTSLSLRHFIYMLRYPAFPNQRTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
P +PFG ALHSLAYKLSLC+EPFSGSALVNFYSKC+ F DARKVFDEISD+DEVCYSALV
Sbjct: 121 PSVPFGFALHSLAYKLSLCSEPFSGSALVNFYSKCQLFGDARKVFDEISDRDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALSMFREM+ DVA TMYSVSGALRAAADLAA EQCRVLHG AVVTG+D
Sbjct: 181 VGLAQNAQSIDALSMFREMKVCDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQTALIDGYGKSGLI+DAR+VFDESL MNVVGWNAMLA YAQQGDKNS ELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLILDAREVFDESLASMNVVGWNAMLASYAQQGDKNSALELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M + G+SPDEYSFLAILTSY NS+ VG+I+LWLRRM V YGVEPTLEH+TCLIDA GR G
Sbjct: 301 MAARGLSPDEYSFLAILTSYCNSRSVGDIQLWLRRMRVGYGVEPTLEHFTCLIDAMGRVG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+L++AER+AMTMPF+PDAAVWRALLSSSA HG G+MAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLKEAERVAMTMPFMPDAAVWRALLSSSASHGAGNMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALS+TARWEEVAVVRKLM ERQVKKKSGRSWIEVRGKVHVFLAGDRNHER EE+Y KL+E
Sbjct: 421 ALSATARWEEVAVVRKLMKERQVKKKSGRSWIEVRGKVHVFLAGDRNHERAEEVYAKLRE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LI EIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALA+GV+AGVAPPGKALRIVKNL
Sbjct: 481 LIREIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAFGVVAGVAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RIC+DCHQ FKYASRVL REIIVRDVNRYHRFL+G CTCED+W
Sbjct: 541 RICKDCHQVFKYASRVLEREIIVRDVNRYHRFLHGSCTCEDIW 581
BLAST of Sed0005379 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 389.0 bits (998), Expect = 9.2e-107
Identity = 208/554 (37.55%), Postives = 338/554 (61.01%), Query Frame = 0
Query: 33 HALAIKSPATDRSVYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHS---NNP 92
HA+ I + +D V LI YS++ + + LF++ F ++V+W A+++ ++ +
Sbjct: 442 HAIKINN-VSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGH 501
Query: 93 LSLRHFVSMLRHPAFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALV 152
+L+ F M + + T A++FKTC L I G +H+ A K + + S ++
Sbjct: 502 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 561
Query: 153 NFYSKCRSFDDARKVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMY 212
+ Y KC A+ FD I D+V ++ ++ G +N + A +F +MR V P +
Sbjct: 562 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 621
Query: 213 SVSGALRAAADLAAAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDES 272
+++ +A++ L A EQ R +H A+ D V T+L+D Y K G I DA +F +
Sbjct: 622 TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF-KR 681
Query: 273 LGCMNVVGWNAMLAGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEI 332
+ MN+ WNAML G AQ G+ T +LF MKSLG+ PD+ +F+ +L++ S+S LV E
Sbjct: 682 IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA 741
Query: 333 ELWLRRMIVEYGVEPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSA 392
+R M +YG++P +EHY+CL DA GRAG +++AE + +M A+++R LL++
Sbjct: 742 YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 801
Query: 393 IHGEGDMAWTMAKRLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGR 452
+ G+ + +A +LLEL D SAYV+++N ++ ++W+E+ + R +M +VKK G
Sbjct: 802 VQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGF 861
Query: 453 SWIEVRGKVHVFLAGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEA 512
SWIEV+ K+H+F+ DR++ +TE IY K+K++I +I++ GYVP D L +V E+EK+ A
Sbjct: 862 SWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERA 921
Query: 513 LWYHSEKLALAYGVLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRY 572
L+YHSEKLA+A+G+L+ PP +R++KNLR+C DCH KY ++V REI++RD NR+
Sbjct: 922 LYYHSEKLAVAFGLLS--TPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRF 981
Query: 573 HRFLYGRCTCEDVW 584
HRF G C+C D W
Sbjct: 982 HRFKDGICSCGDYW 990
BLAST of Sed0005379 vs. ExPASy Swiss-Prot
Match:
Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 2.2e-100
Identity = 208/541 (38.45%), Postives = 310/541 (57.30%), Query Frame = 0
Query: 46 VYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPL---SLRHFVSMLRHP 105
V NNLI YSKS L S R F+ P + +W+++IS + N L SL M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 106 AFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDAR 165
P+ S K+CA L G ++H L+ K + F GS+LV+ Y+KC AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 166 KVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLA 225
K+FDE+ ++ V +S ++ G AQ ++ +AL +F+E ++A YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 226 AAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAML 285
E R +HG ++ + D+ V ++L+ Y K G+ A QVF+E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 286 AGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGV 345
YAQ ELF MK GM P+ +FL +L + S++ LV E + +M E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRI 351
Query: 346 EPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAK 405
EPT +HY L+D GRAG L++A + MP P +VW ALL+S +H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 406 RLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFL 465
++ EL ++ ++NA ++ R+E+ A RKL+ +R KK++G SW+E R KVH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 466 AGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYG 525
AG+R HE+++EIYEKL EL E+EK GY+ +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 526 VLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDV 584
++ P + +R++KNLR+C DCH K+ S RR IIVRD NR+HRF G+C+C D
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDY 588
BLAST of Sed0005379 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 349.4 bits (895), Expect = 8.1e-95
Identity = 202/558 (36.20%), Postives = 315/558 (56.45%), Query Frame = 0
Query: 30 RINHALAIKSP-ATDRSVYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNN 89
RI HA ++S D + N L+ +Y+K L + ++F+++P + V+WT LIS +S +
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 90 PL---SLRHFVSMLRHPAFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSG 149
+L F MLR PN+ T +S+ K A+ G LH K + G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 150 SALVNFYSKCRSFDDARKVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVA 209
SAL++ Y++ DDA+ VFD + +++V ++AL+ G A+ + + AL +F+ M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 210 PTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQV 269
P+ +S + A + EQ + +H + +G L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 270 FDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQL 329
FD L +VV WN++L YAQ G F M+ +G+ P+E SFL++LT+ S+S L
Sbjct: 320 FDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379
Query: 330 VGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALL 389
+ E + M + G+ P HY ++D GRAG+L +A R MP P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439
Query: 390 SSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKK 449
++ +H ++ A+ + EL+ D +VI+ N +S RW + A VRK M E VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499
Query: 450 KSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKE 509
+ SW+E+ +H+F+A D H + EEI K +E++ +I++LGYVP ++ V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559
Query: 510 KKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRD 569
++ L YHSEK+ALA+ +L PPG + I KN+R+C DCH K AS+V+ REIIVRD
Sbjct: 560 REVNLQYHSEKIALAFALLN--TPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 619
Query: 570 VNRYHRFLYGRCTCEDVW 584
NR+H F G C+C+D W
Sbjct: 620 TNRFHHFKDGNCSCKDYW 633
BLAST of Sed0005379 vs. ExPASy Swiss-Prot
Match:
Q9LYV3 (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H89 PE=3 SV=1)
HSP 1 Score: 342.8 bits (878), Expect = 7.5e-93
Identity = 191/544 (35.11%), Postives = 310/544 (56.99%), Query Frame = 0
Query: 43 DRSVYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPL---SLRHFVSML 102
D V L+ LY++ + + ++F+++P +VV W+ +I+ N ++ F+ M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 103 RHPAFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFD 162
PN+ T +S+ CA C G LH L K+ + + +AL++ Y+KC D
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 163 DARKVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAA 222
A K+F E+S K+EV ++ ++VG + A SMFRE + V+ T + S AL A A
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 223 DLAAAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWN 282
LA+ + +HG A+ T V V +LID Y K G I A+ VF+E + ++V WN
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE-METIDVASWN 520
Query: 283 AMLAGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVE 342
A+++GY+ G + + MK P+ +FL +L+ SN+ L+ + + MI +
Sbjct: 521 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 580
Query: 343 YGVEPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWT 402
+G+EP LEHYTC++ GR+G+L+KA ++ +P+ P +WRA+LS+S + A
Sbjct: 581 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 640
Query: 403 MAKRLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVH 462
A+ +L++N D++ YV+V+N + +W VA +RK M E VKK+ G SWIE +G VH
Sbjct: 641 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 700
Query: 463 VFLAGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLAL 522
F G +H + I L+ L + + GYVP + +L ++ ++EK + LW HSE+LAL
Sbjct: 701 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 760
Query: 523 AYGVLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTC 582
AYG++ + + L I+KNLRIC DCH K S +++R++++RD+NR+H F G C+C
Sbjct: 761 AYGLVRMPSSRNRIL-IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSC 820
Query: 583 EDVW 584
D W
Sbjct: 821 GDHW 822
BLAST of Sed0005379 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 1.3e-92
Identity = 183/537 (34.08%), Postives = 300/537 (55.87%), Query Frame = 0
Query: 47 YNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPN 106
+N +IT Y++S + + +LFD+ P +V +WTA++S + N + + + N
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM-VEEARELFDKMPERN 312
Query: 107 QRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFD 166
+ ++ ++ + L + + C + + ++ Y++C +A+ +FD
Sbjct: 313 EVSWNAMLAGYVQGERMEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 372
Query: 167 EISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQ 226
++ +D V ++A++ G +Q+ S +AL +F +M S S AL AD+ A E
Sbjct: 373 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 432
Query: 227 CRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYA 286
+ LHG+ V G + V AL+ Y K G I +A +F E G ++V WN M+AGY+
Sbjct: 433 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG-KDIVSWNTMIAGYS 492
Query: 287 QQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTL 346
+ G F SMK G+ PD+ + +A+L++ S++ LV + + M +YGV P
Sbjct: 493 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 552
Query: 347 EHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLE 406
+HY C++D GRAG LE A + MPF PDAA+W LL +S +HG ++A T A ++
Sbjct: 553 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 612
Query: 407 LNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDR 466
+ + YV+++N +S+ RW +V +R M ++ VKK G SWIE++ K H F GD
Sbjct: 613 MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDE 672
Query: 467 NHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAG 526
H +EI+ L+EL ++K GYV +LH+V E+EK+ + YHSE+LA+AYG++
Sbjct: 673 FHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR- 732
Query: 527 VAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
G+ +R++KNLR+C DCH KY +R+ R II+RD NR+H F G C+C D W
Sbjct: 733 -VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Sed0005379 vs. ExPASy TrEMBL
Match:
A0A6J1IHT2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima OX=3661 GN=LOC111473187 PE=3 SV=1)
HSP 1 Score: 991.1 bits (2561), Expect = 2.0e-285
Identity = 496/583 (85.08%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MND F PR P A A A KSDPRI HA AIKSPATDRSVYNNLITLY K+NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR+P+FPNQRT ASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALSMFREM+AS+VA TMYSVSGALRAAADLAA EQCRVLHG AV TG+D
Sbjct: 181 VGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQTALIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEH+TCLIDA GR G
Sbjct: 301 MGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRDG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALSSTARWEEVA+VRK+M ERQVKKKSGRSWIEVRG+VHVFLAGDRNHERTEEIY KL+
Sbjct: 421 ALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQ FKYASRVLRREI+VRDVNRYHRFL G CTC D+W
Sbjct: 541 RICRDCHQVFKYASRVLRREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of Sed0005379 vs. ExPASy TrEMBL
Match:
A0A6J1G6S2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata OX=3662 GN=LOC111451382 PE=3 SV=1)
HSP 1 Score: 991.1 bits (2561), Expect = 2.0e-285
Identity = 497/583 (85.25%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MND F S PR P A A A KSDPRI HA AIKSPATDRSVYNNLITLY K+NLL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLFDQIP PNVVSWTALISAHSN L+LRHFVSMLR+P+FPNQRT ASL KTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG++LHSLA+KLSLC+EPF GSALVNFYSK FDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALS+FREM+ASDVA TMYSVSGALRAAADLAA EQCRVLHG AVV G+D
Sbjct: 181 VGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQT+LIDGYGKSGLI+DARQVF+ESLGCMNVVGWNAMLA YAQQGDKNST ELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M S G+ PDEY+FLAILTSY NS+LVGEIELWLRRM VEYGV+PTLEHYTCLIDA GRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRAG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AERIAMTMPFVPDAAVWRALLSSSA HG GDMAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALSSTARWEEVAVVRK+M ERQVKKKSGRSWIEVRG+VHVFLAGDRNHERTEEIY KL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYGVL G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQ FKYASRVL REI+VRDVNRYHRFL G CTC D+W
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of Sed0005379 vs. ExPASy TrEMBL
Match:
A0A6J1DUT1 (pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charantia OX=3673 GN=LOC111024565 PE=3 SV=1)
HSP 1 Score: 974.5 bits (2518), Expect = 1.9e-280
Identity = 491/583 (84.22%), Postives = 526/583 (90.22%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MNDFF +P PP A AA KSDPRI HA AIKSPAT RSVYNNLITLYSKS+ L
Sbjct: 1 MNDFF-DPDPTPAPPPAPPLAA-AGKSDPRIVHAQAIKSPATHRSVYNNLITLYSKSSFL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLF QIPFPNVVSWTALISAHSN LSLRHF+ MLR+PAFPNQRT ASLFKTCASL
Sbjct: 61 HYSVRLFHQIPFPNVVSWTALISAHSNTSLSLRHFIYMLRYPAFPNQRTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
P +PFG ALHSLAYKLSLC+EPFSGSALVNFYSKC+ F DARKVFDEISD+DEVCYSALV
Sbjct: 121 PSVPFGFALHSLAYKLSLCSEPFSGSALVNFYSKCQLFGDARKVFDEISDRDEVCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+DALSMFREM+ DVA TMYSVSGALRAAADLAA EQCRVLHG AVVTG+D
Sbjct: 181 VGLAQNAQSIDALSMFREMKVCDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
DVIVQTALIDGYGKSGLI+DAR+VFDESL MNVVGWNAMLA YAQQGDKNS ELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLILDAREVFDESLASMNVVGWNAMLASYAQQGDKNSALELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
M + G+SPDEYSFLAILTSY NS+ VG+I+LWLRRM V YGVEPTLEH+TCLIDA GR G
Sbjct: 301 MAARGLSPDEYSFLAILTSYCNSRSVGDIQLWLRRMRVGYGVEPTLEHFTCLIDAMGRVG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+L++AER+AMTMPF+PDAAVWRALLSSSA HG G+MAW MAKRLLELN +DDSAYVIVAN
Sbjct: 361 KLKEAERVAMTMPFMPDAAVWRALLSSSASHGAGNMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALS+TARWEEVAVVRKLM ERQVKKKSGRSWIEVRGKVHVFLAGDRNHER EE+Y KL+E
Sbjct: 421 ALSATARWEEVAVVRKLMKERQVKKKSGRSWIEVRGKVHVFLAGDRNHERAEEVYAKLRE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
LI EIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALA+GV+AGVAPPGKALRIVKNL
Sbjct: 481 LIREIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAFGVVAGVAPPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RIC+DCHQ FKYASRVL REIIVRDVNRYHRFL+G CTCED+W
Sbjct: 541 RICKDCHQVFKYASRVLEREIIVRDVNRYHRFLHGSCTCEDIW 581
BLAST of Sed0005379 vs. ExPASy TrEMBL
Match:
A0A5A7U1J3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002030 PE=3 SV=1)
HSP 1 Score: 927.2 bits (2395), Expect = 3.5e-266
Identity = 465/583 (79.76%), Postives = 516/583 (88.51%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MN FF S P P A A AKSDPRI+HA AIKSPATDR+VYNNLIT YS++NLL
Sbjct: 1 MNAFFASDPTPPPEPPLAAATKVVAKSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLF QIPFP++VSWTA ISAHSN LSLRHFVSMLR+P FPN+RT ASLFKTCASL
Sbjct: 61 HYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG+ALHSLAYKLSLC + +SGSALVNFYSKCR F+ A KVFDEISD+DE CYSALV
Sbjct: 121 PCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+ ALSMFR+M+AS+VA T+YSVSGAL AAADLAA E+CRVLH AVVTG+D
Sbjct: 181 VGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
+VIVQTALID YGKSGLI++ARQVFDE+LGCMN+VGWNA+L+ YAQQGD+NST ELFNS
Sbjct: 241 TNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
MK+ MSPDEYSFLAIL+S+ N+ VGEI+ WLRRMIVEYGV+PTLEH+TCLIDA GRAG
Sbjct: 301 MKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRAG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AER+AMTMPFVPD AVWRALL+SSA HG GDMAW MAKRLLELNL+DDSAYVIVAN
Sbjct: 361 KLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALS+TARWEEVAVVRKLM ER VKKKSGRSWIEVRG+VHVFLAGDRNHER EE+ KLKE
Sbjct: 421 ALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLKE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
L+ EIEKLGYVPI E+L EVGEKEKKEAL YHSEKLALAYG+L GVA PGKALRIVKNL
Sbjct: 481 LVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQFFKYASRVL++EIIVRDVNRYHRF YG CTC D+W
Sbjct: 541 RICRDCHQFFKYASRVLKKEIIVRDVNRYHRFSYGGCTCADIW 583
BLAST of Sed0005379 vs. ExPASy TrEMBL
Match:
A0A1S3AX28 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=3656 GN=LOC103483548 PE=3 SV=1)
HSP 1 Score: 927.2 bits (2395), Expect = 3.5e-266
Identity = 465/583 (79.76%), Postives = 516/583 (88.51%), Query Frame = 0
Query: 1 MNDFFYSISDSPRPPAAATAAATTAKSDPRINHALAIKSPATDRSVYNNLITLYSKSNLL 60
MN FF S P P A A AKSDPRI+HA AIKSPATDR+VYNNLIT YS++NLL
Sbjct: 1 MNAFFASDPTPPPEPPLAAATKVVAKSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNLL 60
Query: 61 HYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPNQRTFASLFKTCASL 120
HYS RLF QIPFP++VSWTA ISAHSN LSLRHFVSMLR+P FPN+RT ASLFKTCASL
Sbjct: 61 HYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCASL 120
Query: 121 PCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFDEISDKDEVCYSALV 180
PC+ FG+ALHSLAYKLSLC + +SGSALVNFYSKCR F+ A KVFDEISD+DE CYSALV
Sbjct: 121 PCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSALV 180
Query: 181 VGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQCRVLHGQAVVTGMD 240
VG+AQNAQS+ ALSMFR+M+AS+VA T+YSVSGAL AAADLAA E+CRVLH AVVTG+D
Sbjct: 181 VGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGLD 240
Query: 241 ADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYAQQGDKNSTFELFNS 300
+VIVQTALID YGKSGLI++ARQVFDE+LGCMN+VGWNA+L+ YAQQGD+NST ELFNS
Sbjct: 241 TNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFNS 300
Query: 301 MKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTLEHYTCLIDATGRAG 360
MK+ MSPDEYSFLAIL+S+ N+ VGEI+ WLRRMIVEYGV+PTLEH+TCLIDA GRAG
Sbjct: 301 MKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRAG 360
Query: 361 ELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLELNLYDDSAYVIVAN 420
+LE+AER+AMTMPFVPD AVWRALL+SSA HG GDMAW MAKRLLELNL+DDSAYVIVAN
Sbjct: 361 KLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVAN 420
Query: 421 ALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDRNHERTEEIYEKLKE 480
ALS+TARWEEVAVVRKLM ER VKKKSGRSWIEVRG+VHVFLAGDRNHER EE+ KLKE
Sbjct: 421 ALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLKE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAGVAPPGKALRIVKNL 540
L+ EIEKLGYVPI E+L EVGEKEKKEAL YHSEKLALAYG+L GVA PGKALRIVKNL
Sbjct: 481 LVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKNL 540
Query: 541 RICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
RICRDCHQFFKYASRVL++EIIVRDVNRYHRF YG CTC D+W
Sbjct: 541 RICRDCHQFFKYASRVLKKEIIVRDVNRYHRFSYGGCTCADIW 583
BLAST of Sed0005379 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 389.0 bits (998), Expect = 6.5e-108
Identity = 208/554 (37.55%), Postives = 338/554 (61.01%), Query Frame = 0
Query: 33 HALAIKSPATDRSVYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHS---NNP 92
HA+ I + +D V LI YS++ + + LF++ F ++V+W A+++ ++ +
Sbjct: 442 HAIKINN-VSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGH 501
Query: 93 LSLRHFVSMLRHPAFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALV 152
+L+ F M + + T A++FKTC L I G +H+ A K + + S ++
Sbjct: 502 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 561
Query: 153 NFYSKCRSFDDARKVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMY 212
+ Y KC A+ FD I D+V ++ ++ G +N + A +F +MR V P +
Sbjct: 562 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 621
Query: 213 SVSGALRAAADLAAAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDES 272
+++ +A++ L A EQ R +H A+ D V T+L+D Y K G I DA +F +
Sbjct: 622 TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF-KR 681
Query: 273 LGCMNVVGWNAMLAGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEI 332
+ MN+ WNAML G AQ G+ T +LF MKSLG+ PD+ +F+ +L++ S+S LV E
Sbjct: 682 IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA 741
Query: 333 ELWLRRMIVEYGVEPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSA 392
+R M +YG++P +EHY+CL DA GRAG +++AE + +M A+++R LL++
Sbjct: 742 YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 801
Query: 393 IHGEGDMAWTMAKRLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGR 452
+ G+ + +A +LLEL D SAYV+++N ++ ++W+E+ + R +M +VKK G
Sbjct: 802 VQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGF 861
Query: 453 SWIEVRGKVHVFLAGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEA 512
SWIEV+ K+H+F+ DR++ +TE IY K+K++I +I++ GYVP D L +V E+EK+ A
Sbjct: 862 SWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERA 921
Query: 513 LWYHSEKLALAYGVLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRY 572
L+YHSEKLA+A+G+L+ PP +R++KNLR+C DCH KY ++V REI++RD NR+
Sbjct: 922 LYYHSEKLAVAFGLLS--TPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRF 981
Query: 573 HRFLYGRCTCEDVW 584
HRF G C+C D W
Sbjct: 982 HRFKDGICSCGDYW 990
BLAST of Sed0005379 vs. TAIR 10
Match:
AT5G52630.1 (mitochondrial RNAediting factor 1 )
HSP 1 Score: 367.9 bits (943), Expect = 1.6e-101
Identity = 208/541 (38.45%), Postives = 310/541 (57.30%), Query Frame = 0
Query: 46 VYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPL---SLRHFVSMLRHP 105
V NNLI YSKS L S R F+ P + +W+++IS + N L SL M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 106 AFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDAR 165
P+ S K+CA L G ++H L+ K + F GS+LV+ Y+KC AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 166 KVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLA 225
K+FDE+ ++ V +S ++ G AQ ++ +AL +F+E ++A YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 226 AAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAML 285
E R +HG ++ + D+ V ++L+ Y K G+ A QVF+E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 286 AGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGV 345
YAQ ELF MK GM P+ +FL +L + S++ LV E + +M E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRI 351
Query: 346 EPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAK 405
EPT +HY L+D GRAG L++A + MP P +VW ALL+S +H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 406 RLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFL 465
++ EL ++ ++NA ++ R+E+ A RKL+ +R KK++G SW+E R KVH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 466 AGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYG 525
AG+R HE+++EIYEKL EL E+EK GY+ +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 526 VLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDV 584
++ P + +R++KNLR+C DCH K+ S RR IIVRD NR+HRF G+C+C D
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDY 588
BLAST of Sed0005379 vs. TAIR 10
Match:
AT5G13230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 342.8 bits (878), Expect = 5.4e-94
Identity = 191/544 (35.11%), Postives = 310/544 (56.99%), Query Frame = 0
Query: 43 DRSVYNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPL---SLRHFVSML 102
D V L+ LY++ + + ++F+++P +VV W+ +I+ N ++ F+ M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 103 RHPAFPNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFD 162
PN+ T +S+ CA C G LH L K+ + + +AL++ Y+KC D
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 163 DARKVFDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAA 222
A K+F E+S K+EV ++ ++VG + A SMFRE + V+ T + S AL A A
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 223 DLAAAEQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWN 282
LA+ + +HG A+ T V V +LID Y K G I A+ VF+E + ++V WN
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE-METIDVASWN 520
Query: 283 AMLAGYAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVE 342
A+++GY+ G + + MK P+ +FL +L+ SN+ L+ + + MI +
Sbjct: 521 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 580
Query: 343 YGVEPTLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWT 402
+G+EP LEHYTC++ GR+G+L+KA ++ +P+ P +WRA+LS+S + A
Sbjct: 581 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 640
Query: 403 MAKRLLELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVH 462
A+ +L++N D++ YV+V+N + +W VA +RK M E VKK+ G SWIE +G VH
Sbjct: 641 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 700
Query: 463 VFLAGDRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLAL 522
F G +H + I L+ L + + GYVP + +L ++ ++EK + LW HSE+LAL
Sbjct: 701 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 760
Query: 523 AYGVLAGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTC 582
AYG++ + + L I+KNLRIC DCH K S +++R++++RD+NR+H F G C+C
Sbjct: 761 AYGLVRMPSSRNRIL-IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSC 820
Query: 583 EDVW 584
D W
Sbjct: 821 GDHW 822
BLAST of Sed0005379 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 342.0 bits (876), Expect = 9.1e-94
Identity = 183/537 (34.08%), Postives = 300/537 (55.87%), Query Frame = 0
Query: 47 YNNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSNNPLSLRHFVSMLRHPAFPN 106
+N +IT Y++S + + +LFD+ P +V +WTA++S + N + + + N
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM-VEEARELFDKMPERN 312
Query: 107 QRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKVFD 166
+ ++ ++ + L + + C + + ++ Y++C +A+ +FD
Sbjct: 313 EVSWNAMLAGYVQGERMEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 372
Query: 167 EISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAAEQ 226
++ +D V ++A++ G +Q+ S +AL +F +M S S AL AD+ A E
Sbjct: 373 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 432
Query: 227 CRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAGYA 286
+ LHG+ V G + V AL+ Y K G I +A +F E G ++V WN M+AGY+
Sbjct: 433 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG-KDIVSWNTMIAGYS 492
Query: 287 QQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEPTL 346
+ G F SMK G+ PD+ + +A+L++ S++ LV + + M +YGV P
Sbjct: 493 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 552
Query: 347 EHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRLLE 406
+HY C++D GRAG LE A + MPF PDAA+W LL +S +HG ++A T A ++
Sbjct: 553 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 612
Query: 407 LNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAGDR 466
+ + YV+++N +S+ RW +V +R M ++ VKK G SWIE++ K H F GD
Sbjct: 613 MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDE 672
Query: 467 NHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVLAG 526
H +EI+ L+EL ++K GYV +LH+V E+EK+ + YHSE+LA+AYG++
Sbjct: 673 FHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR- 732
Query: 527 VAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
G+ +R++KNLR+C DCH KY +R+ R II+RD NR+H F G C+C D W
Sbjct: 733 -VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Sed0005379 vs. TAIR 10
Match:
AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.3 bits (874), Expect = 1.6e-93
Identity = 193/539 (35.81%), Postives = 315/539 (58.44%), Query Frame = 0
Query: 48 NNLITLYSKSNLLHYSARLFDQIPFPNVVSWTALISAHSN---NPLSLRHFVSMLRHPAF 107
N LI +Y K NLL+ + +LFDQ+P NV+SWT +ISA+S + +L V MLR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 108 PNQRTFASLFKTCASLPCIPFGIALHSLAYKLSLCTEPFSGSALVNFYSKCRSFDDARKV 167
PN T++S+ ++C + + LH K L ++ F SAL++ ++K +DA V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219
Query: 168 FDEISDKDEVCYSALVVGMAQNAQSVDALSMFREMRASDVAPTMYSVSGALRAAADLAAA 227
FDE+ D + +++++ G AQN++S AL +F+ M+ + +++ LRA LA
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279
Query: 228 EQCRVLHGQAVVTGMDADVIVQTALIDGYGKSGLIVDARQVFDESLGCMNVVGWNAMLAG 287
E H + D D+I+ AL+D Y K G + DA +VF++ + +V+ W+ M++G
Sbjct: 280 ELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339
Query: 288 YAQQGDKNSTFELFNSMKSLGMSPDEYSFLAILTSYSNSQLVGEIELWLRRMIVEYGVEP 347
AQ G +LF MKS G P+ + + +L + S++ L+ + + R M YG++P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399
Query: 348 TLEHYTCLIDATGRAGELEKAERIAMTMPFVPDAAVWRALLSSSAIHGEGDMAWTMAKRL 407
EHY C+ID G+AG+L+ A ++ M PDA WR LL + + +A AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459
Query: 408 LELNLYDDSAYVIVANALSSTARWEEVAVVRKLMNERQVKKKSGRSWIEVRGKVHVFLAG 467
+ L+ D Y +++N +++ +W+ V +R M +R +KK+ G SWIEV ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519
Query: 468 DRNHERTEEIYEKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGVL 527
D +H + E+ +KL +LI + +GYVP + +L ++ ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579
Query: 528 AGVAPPGKALRIVKNLRICRDCHQFFKYASRVLRREIIVRDVNRYHRFLYGRCTCEDVW 584
P K +RI KNLRIC DCH F K AS++ R I++RD RYH F G+C+C D W
Sbjct: 580 --TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022947552.1 | 4.0e-285 | 85.25 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata] | [more] |
XP_022974509.1 | 4.0e-285 | 85.08 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima] | [more] |
KAG6597338.1 | 1.5e-284 | 85.10 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023540846.1 | 4.9e-283 | 84.56 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp... | [more] |
XP_022157968.1 | 3.9e-280 | 84.22 | pentatricopeptide repeat-containing protein At4g33170-like [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q9SMZ2 | 9.2e-107 | 37.55 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Q9LTF4 | 2.2e-100 | 38.45 | Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... | [more] |
Q9LIQ7 | 8.1e-95 | 36.20 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9LYV3 | 7.5e-93 | 35.11 | Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS... | [more] |
Q9SY02 | 1.3e-92 | 34.08 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IHT2 | 2.0e-285 | 85.08 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima O... | [more] |
A0A6J1G6S2 | 2.0e-285 | 85.25 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata... | [more] |
A0A6J1DUT1 | 1.9e-280 | 84.22 | pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charanti... | [more] |
A0A5A7U1J3 | 3.5e-266 | 79.76 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AX28 | 3.5e-266 | 79.76 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT4G33170.1 | 6.5e-108 | 37.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G52630.1 | 1.6e-101 | 38.45 | mitochondrial RNAediting factor 1 | [more] |
AT5G13230.1 | 5.4e-94 | 35.11 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G02750.1 | 9.1e-94 | 34.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G03880.1 | 1.6e-93 | 35.81 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |