Sed0005343 (gene) Chayote v1

Overview


Name	Sed0005343
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein OSB2, chloroplastic-like
Location	LG09: 34684396 .. 34689753 (+)
RNA-Seq Expression	Sed0005343
Synteny	Sed0005343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTGAAATCGGGAGCGACGACAATGGCGCTAAAGCAAACCCTAACTTTCTCATCGCCACTCTTATCTAAACACTCCATTTTCGCAAACAAATTGCCGATCTCTTCTTTCTCCCCATGTCTCTTGCATTTCGACGCTGCTAAACAGCTCCGATTCGCCACTCGTTTCCCAAAATGCTCGGCGATGGAGAATCTCAGCAATAACTCTGTAACCTACCCGAAACCTACAGAAATTTAGTGGAAGAAGGAGCTCAGCAACTCCGTCAGTCTCATCGGGACTGTTGGCGTGCCGGTGGAGCTCAAGCATTTGCCGTCCGGCAAGGATGTGGCGTCGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGTACTAATTTTTTGTTTCTTTTCCAAATGGGGGTTTTAGTATGCTGTATGCTTACATCGATAACGATGTTGTTTTTTTGTTTTTGGTTTATGGATTTTGGTTTTTAGTTTTTGGTTTTAAAAAATAAAAATCATACATGTTTAGGCCTCGTTTCATAACCATTTTGTTTTTTAAATTTAACCTTACCATAGCTCTTTTCTTATTTGGATATCTACCTATAACCTATATTTTAAGAAACGAAACCAAAATTTGGAAACAAAAAAAGAAGTAGTTTCCAAATGTTTGTTTTTGTTTTTCAAATTTGGTTAGTATACACCTACTTTCTTAAAGAAATAGGGATATATTGTAGGAAAGATGGAGCACACTATAGGAAATTTAAGTAAAAATAGACTTAAATTTCATAAAAAAAAGAAAGCATTGGTTATCAAACGAGACCTTAATAATTTGTTTTTGGTTTTTTAAAAACTAAAAACTAAAAAAAATAAGTTTGTTAACTATTTTTTATTTTTTAAAAATAAAATTTTATTATTTGATAAAATAAAATAAAACTATTGGAGAATATTATTGATCTAATAAACTTCAAATTTGCGTGTTTGAACTTTATTGGTAGTGTTTTATTACTTTTCTAACATTTTTCCAAAAAAAACAAATAATGGTTTTTATAAGCTTTTTGTTTTCTTAATTTTTCGAATTCCTTTAATATTTTAAAAATGTTCTTAGAATTTTGAAACAATAAGCAAAATTGGTTGTGAAATGCTGTTCTTAAAAAATTAGAAACAAAAACATAAAACCAAAAGTGAAATGGTTATCAAATGGGGCTTGAATGATTGGGTGATTTGTTTTTGGACGGGGTGATTGAATTTTTGCAGATTTTGAAAAATATGCTCTAATTGAGTGGTTGAAGTTGAGATGTTAAGAATGTATGGAAATTATTGCAAATTTTGAAGAATATGTTCTTATAGAATTCATTTCTGTTTACATGGGAGTGACATTCTCAAACTTGGTTTCTCAATTTCAGTAGGATTTAGAAACTATATGAATCTTAATTTAATGATTAATGTATTTCAGAAGAAGAAAAAATGATGATTTTCTCTGTTTGGGCGTTGAGAGGGAAGAGGATGTGTGGAATTTTTCGCCTTTTAGAATGTTTTCTAATGGAAGCTTATTATCATCCTTATTTTGCAATTTTGGCTCCATCTTTTAGTTCGTCTTTATATTTATATATAGAGCTTTTGATCTATACCCTTTTTTTTTTTTAAACATTTTATACCTTTTTCCTTAACAAAAAAAATTGTTTCAAAGCTAAAAAATAGTATGCTAATGTATACTAAAAAATTAAACTGCTTTTCTGTTGCAGGAGCTTTACTTATTCCATTCCTCTGAATCTATGCTACCATAATGCCAACTAATCCATTGTCATTTGAAGTAAATATTATCTGCTAGTGTCTCTAAGGGGTGGCTCAGTGGTTGAAGACTTGAGCTTTGAAGGTATGCTCCCTTCAAGGTCCCAGGTTCGAGATTTACCTGTGACATTACTCTTTCGATGTCTTCGGTGTCTGACCTAGGGACGGGCGTGGTTACACTTCTTTCAAAAAAAAAAAAAAAAAAAATTATCTGCTAGTGCATCCTAGACTAGAGTGTTTTGGTTCAAACTATCTCTAGGCTCTGCTCCTGTGACTCATCTCAGCTGCCAAATTCTTTGCCCTTTCACTATATTTAACTGATTAATCATCCAACATTTTTGTAATTTTGTTATTTGTGTTAACAGTTCTCAACATTTTGTAAGGTACTAGAGTTGCTATATGCTCGAAGTATTCTGGGTTGGTCTAATTGTCACTGGAACAAGTGAAAGAGTAAAGAAGCTATTAGTAGTTCTTCCTACTTGGAAATCTTCTACAAGGCCTTTCTCCACCCCCTCTCGAAATCATTTTGCTTAAAACTTCAACTACCATAAAAAAGAGACGACATGAGAAAGAGAATCATCCTATCGAATTTTCCGAGTTCTTCTTAACCTTAGTCATTAAGATTGCGTCTCTAATCCAAATCATCCATAGTGTCATCTTGATGATAATCTTCACCTCCAAAGTTGTCATCTTGTTAATTATCGCTTGTGCACAACGTGATTATCTCCTTGCCTGTGTCTGACTCTACAACATTTGGATGTCAAGGAAACCTGTAGAAAATTATTTCCTAGGTAGGTGGCCACCATGAAAATAATTTCCAACAAGTTTCCTTGTCATCCGAATGTTGTAAGGGAGTCGAGATTTTCTTTCTTGTAAATACCTTTGATAGGTTTCTTTGTATCTTATAAAAAAAGACATTAAATCACCTGCAAATCGTATTCAAAATTTAAAAAAAAAAAATCACCCGCAAAACACCCAGCTTGCTCACATAGTCTATAAATTTCCTAAATCCTTCCGAAAATGTCCTCTTTTCCATCGAAACATGGCAGGCCATAATTCTTGAAAGCTGTCAAAAAGGCTTGTTGGAATACCGCAAAAATGAATCATTAAATAGAATGATCTAAGAACCAATTCCTTGGCACGAAACAGAGCAAAGTCCAAAACCTGTGCATGAAACGTTTGGATCGTTGAAGAATTCCTACACCAAACCACTTCTACAGTAAAACCTCCTTAATAGGCTTCCTTTTTGAAAGGGTGACTAGTGAGAGTATATTCCAGCAGAGCCATCATATCATTTGGGAGAGCAGTGATCCGGTATCGGTTAGCTTTTCCAATAGCAGTTTTTGTTAGTTTACCTTTGAACTATTGGTTCTTACCACATGTTTGTTTACTTAGATAAGCAGCAAGTTACATAAAGAGAGAGGGAAGAACAAGCAGAAAAAGGCATAGTTGAAAGACTCCTCATATTAAGTCCAAGCCAAATTTCCCACAATACACAAAGTTCTTTTTTTCACTCTGCTCCGAAAAACTCTGATGTCTAGAGGGACACAACATTGCATTTCAATCTTCATGTGTTTAAATATTGAGACAGTTAGAACTTAGGACTTAAAAAAGTCTTCTATATGAGCTGTGGTGGGAGAGGAACCTTCGTATCTTTCAAGTCTCTCATCTTCCCTTGAATATTCGAATTGAATCTGCCCGTATGAAGTCCTTATGGGCTTCCACCTCCCAGGATTTTGCCTCTTACTCCATCCAACAGATCTTTTTGAATTGGGATGTCTTTTTCTAGTTTCTTGTCTTTCATTGTATGCTGGTTTCTTTGTTCCTTGTCTTGCTGTTTTATGTTTTTGTTTGTTTTTTTTTTAAATCTTTTTTGTTTCCCCTTGTAACACTTATCATAAGAAAATGAATATAACTATCTTTTTTATTGTTTTGAAAAGATGGATATAACTATCTAGATCAGTATCTTGCTGGGATTTTTATTCGCCTATTCCAATATGGATTGTTGGCCTTTTCAGGATAAAGTTAACATTCTGGAATGAATTGGCGCATGTTGCTTCTCAACACATTCAGAAAGGAAACCAGATATATGTATCTGGTCGGCTGGTAGCAGATTGAGTTGAAACTGATGATAGGAAACAGCAAACATACTACAAGGTTTTTTCGTCCTTGTTCTCATTCTTCCATATTTTTCGACTCCTCTCCAGATGTAGATACTGATGTTTTTCATATCTTTTCAGGTAGCAGTTTAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGAACCTCAATATGACCAGAACTCGAATTCCGTTACGGCAGGCATGGGATTTTTTTAAAATTTTAGATTACTGGTATGACACTTTACTTTTCTTCTGGATATTGTATCATTATTTGGTGTTCTTTCACATTTTTTTGCAGGGAGAAAGCTCGGCAATGGTGCTGTTGATAATATGGGATCCACACAGGAATTATGGCAAGCTTTCTTTGCTAATCCCGTCGACTGGTGGGACAACCGAAAGAACAAGATACTTAATTTATTCTCATAATTCCTAATGGTTTATTTGAATTCTTTATCCATAGTTCTAATTTAAAACAAAATTTGTAAACTTTGTTTTTTAGTTTTTAAATTTTTGTTTCGTTAACCATCATGGACTGACATAGTAGTCATAAGGACTTTGGGTAACTGAGAGATGATGGGTTCAATTCATGGTATCTACCAACCTAGGAATTACCTTGACATCTGAATGTTGAGGTGGTATGTCCTGTAATAATAGTCAAGATGCGTGCAAACTAGTTTGGAAGCCACGCCCACGAGTATAATAATAAAAAAAATGATTTGGATGATAGGATTGTTATTACTGCAAAGCTTATGTCAATTAGAGCTACATTCACTTGGGCATCAACAAACTATTTTGATTACCTTACCTAAATATATTGTTATATACTACATTATATGTATAAAAGAAAATTTACTATGAGCAGCATATTCTACCTCTTATATTATATTTGAAACATAATTTTTAAAATAATTCATCTATAGCATATTGATTTCTTTCATTCAAATAGTGATAGAACTCAATTTTGAATTTTTATCACTGATAGAAAACTCAAGCGGTGATAGAATGAGTTTATCATTAATTGAATTTATCACTAACAGAATTCAATCAGTGATAGAACTCAATTTGAATTTTCTGCTACAAATGAATTAATTTTGATTTTGTGCTATAGATGAAAATATTTTACCATTTTTGGTTATACATGCAAAATCCCCTATATAAAATGGCTGATATCAATGATAAAAAAGGTTACAAAAAAAAAAAGATTAGCAGCTTAATGAGTTTCGCATATTAACTGTTAATATATTGGAGTTTTGATTGTACTTGCAGAAGAACCCTAATTATCCAGATTTTAAGCACAAGGACACAGGTGAAGCCCTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAACTTGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAATTTTGTAAATAATTTTGATTTCCCATCGTATTAG

mRNA sequence

ATGAGATTGAAATCGGGAGCGACGACAATGGCGCTAAAGCAAACCCTAACTTTCTCATCGCCACTCTTATCTAAACACTCCATTTTCGCAAACAAATTGCCGATCTCTTCTTTCTCCCCATGTCTCTTGCATTTCGACGCTGCTAAACAGCTCCGATTCGCCACTCGTTTCCCAAAATGCTCGGCGATGGAGAATCTCAGCAATAACTCTTGGAAGAAGGAGCTCAGCAACTCCGTCAGTCTCATCGGGACTGTTGGCGTGCCGGTGGAGCTCAAGCATTTGCCGTCCGGCAAGGATGTGGCGTCGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGATAAAGTTAACATTCTGGAATGAATTGGCGCATGTTGCTTCTCAACACATTCAGAAAGGAAACCAGATATATGTATCTGGTCGGCTGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGAACCTCAATATGACCAGAACTCGAATTCCGTTACGGCAGGGAGAAAGCTCGGCAATGGTGCTGTTGATAATATGGGATCCACACAGGAATTATGGCAAGCTTTCTTTGCTAATCCCAAGAACCCTAATTATCCAGATTTTAAGCACAAGGACACAGGTGAAGCCCTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAACTTGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAATTTTGTAAATAATTTTGATTTCCCATCGTATTAG

Coding sequence (CDS)

ATGAGATTGAAATCGGGAGCGACGACAATGGCGCTAAAGCAAACCCTAACTTTCTCATCGCCACTCTTATCTAAACACTCCATTTTCGCAAACAAATTGCCGATCTCTTCTTTCTCCCCATGTCTCTTGCATTTCGACGCTGCTAAACAGCTCCGATTCGCCACTCGTTTCCCAAAATGCTCGGCGATGGAGAATCTCAGCAATAACTCTTGGAAGAAGGAGCTCAGCAACTCCGTCAGTCTCATCGGGACTGTTGGCGTGCCGGTGGAGCTCAAGCATTTGCCGTCCGGCAAGGATGTGGCGTCGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGATAAAGTTAACATTCTGGAATGAATTGGCGCATGTTGCTTCTCAACACATTCAGAAAGGAAACCAGATATATGTATCTGGTCGGCTGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGAACCTCAATATGACCAGAACTCGAATTCCGTTACGGCAGGGAGAAAGCTCGGCAATGGTGCTGTTGATAATATGGGATCCACACAGGAATTATGGCAAGCTTTCTTTGCTAATCCCAAGAACCCTAATTATCCAGATTTTAAGCACAAGGACACAGGTGAAGCCCTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAACTTGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAATTTTGTAAATAATTTTGATTTCCCATCGTATTAG

Protein sequence

MRLKSGATTMALKQTLTFSSPLLSKHSIFANKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENLSNNSWKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSWIKLTFWNELAHVASQHIQKGNQIYVSGRLQLNFIERSNSTEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANPKNPNYPDFKHKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY

Homology

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BLAST of Sed0005343 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 209/291 (71.82%), Postives = 225/291 (77.32%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTLT SS LLSK+SIF+   N+L ISSF P L   +A K LRFATRFPKCSAMEN 
Sbjct: 3   MALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAMENY 62

Query: 70  SNNS----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSW 129
           S+ S          WKK+LSNSVSLIGTVG+PVELKHL +GKDVA TRLAVWKSSTETSW
Sbjct: 63  SSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTETSW 122

Query: 130 IKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSNS 189
           I LTFW+ELAHVASQHIQKGNQIYVSGRL                     QLNFIERSNS
Sbjct: 123 INLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNS 182

Query: 190 TEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFKH 249
           T P YDQ+SNSV AG+KLG+GAVDN+GSTQELWQAFFANP          KNP YPDFKH
Sbjct: 183 TGPHYDQDSNSVMAGKKLGSGAVDNVGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 250 KDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           KDTGEALWVEGR NPPWVKSQLA+LDMRM SLD+QEAKMANFV NFDFPSY
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMANFVTNFDFPSY 293

[Close]

BLAST of Sed0005343 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 9.3e-101
Identity = 202/292 (69.18%), Postives = 220/292 (75.34%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL  SS L SK+SIF+   N+LPISSF P   + +  K LRF   FPKCSAMEN 
Sbjct: 3   MALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENY 62

Query: 70  SNNS-----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS 129
           +N S           WKKELSNSV+LIGTVG+PVELKHLPSGKDVA TRLAVWKSSTETS
Sbjct: 63  TNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 122

Query: 130 WIKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSN 189
           WI LTFW+ELAH+ASQH+QKGNQIYVSGRL                     QLNFIERSN
Sbjct: 123 WIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 182

Query: 190 STEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFK 249
           ST P YDQ+SNS+ AGRK G+GAVDN GSTQELWQAFFANP          KNP YPDFK
Sbjct: 183 STAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 242

Query: 250 HKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           HKDTGEALWVEGR NPPWVKSQLA+LDMRMGSLD+QEAKMANFV +FDFPSY
Sbjct: 243 HKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Sed0005343 vs. NCBI nr
Match: XP_022155803.1 (protein OSB2, chloroplastic-like isoform X2 [Momordica charantia])

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-99
Identity = 200/290 (68.97%), Postives = 217/290 (74.83%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL+ SS LL KH++ +   N+  I+S S    H DAAK+LRFA RFPKCSAMEN 
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASLS----HLDAAKRLRFARRFPKCSAMENF 62

Query: 70  SNNS----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSW 129
           SN S          W KELSNSVSLIGTVG PVE+KHL SGKDVA TRLAVWKSSTETSW
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 130 IKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSNS 189
           I LTFW+ELAH+A QH+QKGNQI+VSGRL                     QLNFIERS S
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 190 TEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP---------KNPNYPDFKHK 249
           T P +DQ+SNS+ AGRKLGNGA DNMGSTQELWQAFFANP         KNP YPDFKHK
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKNPKYPDFKHK 242

Query: 250 DTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           DTGEALWVEGR NPPWVKSQLA+LDMRMGSLDEQEAKMANFV N DFPSY
Sbjct: 243 DTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Sed0005343 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 199/292 (68.15%), Postives = 218/292 (74.66%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           +AL+QTLT SS   SK+SIF+   N+L ISSF P   + +  K LRFATRFPKCSAMEN 
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 70  SNNS-----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS 129
           +N S           WKKELSNSV+LIGTVG+PVELKHLPSGKDVA TRLAVWKSSTETS
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 130 WIKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSN 189
           WI LTFW+ELAH+ASQH+QKGNQIYVSGRL                     QLNFIERSN
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 190 STEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFK 249
           ST P YDQ+SNS+ AGRK  +GAVDN  STQELWQAFFANP          KNP YPDFK
Sbjct: 185 STAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 244

Query: 250 HKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           HKDTGEALWVEGR NPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 245 HKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Sed0005343 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 200/291 (68.73%), Postives = 217/291 (74.57%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL+ SS LL KH++ +   N+  I+S S    H DAAK+LRFA RFPKCSAMEN 
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASLS----HLDAAKRLRFARRFPKCSAMENF 62

Query: 70  SNNS----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSW 129
           SN S          W KELSNSVSLIGTVG PVE+KHL SGKDVA TRLAVWKSSTETSW
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 130 IKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSNS 189
           I LTFW+ELAH+A QH+QKGNQI+VSGRL                     QLNFIERS S
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 190 TEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFKH 249
           T P +DQ+SNS+ AGRKLGNGA DNMGSTQELWQAFFANP          KNP YPDFKH
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 250 KDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           KDTGEALWVEGR NPPWVKSQLA+LDMRMGSLDEQEAKMANFV N DFPSY
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 58/204 (28.43%), Postives = 90/204 (44.12%), Query Frame = 0


Query: 72  KKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWK--SSTETSWIKLTFWNELAHVA 131
           K  L NSVSL+G V   +++ +    +    T L V    +   +  I L  W+ +A   
Sbjct: 51  KFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTC 110

Query: 132 SQHIQKGNQIYVSGRLQ------------LNFIERSNSTEPQYDQNSNSVTAGRKLGNG- 191
             H++  + I VSGRL+            LN   +    E  Y     S     ++    
Sbjct: 111 IAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSHVLDSQISKNP 170

Query: 192 ---AVDNMGSTQE----LWQAFFANP----------KNPNYPDFKHKDTGEALWVEGRNN 244
                D++  +++    LWQ FF+NP          KNP  PDFKHKDTGEALW+   + 
Sbjct: 171 KTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWL-CSDL 230

[Close]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.8e-10
Identity = 55/198 (27.78%), Postives = 84/198 (42.42%), Query Frame = 0


Query: 71  WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHVA 130
           +K E+SN ++LIG V  PV+      GK  A T ++    S  ++ WI + F  +LA +A
Sbjct: 76  YKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGDLAKIA 135

Query: 131 SQHIQKGNQIYVSGRL---------------------QLNFIERSNST-----EPQYDQN 190
            QH++K ++I+VSG+L                      LNF++ + ST      P+ +  
Sbjct: 136 VQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPPEKEVT 195

Query: 191 SNSVTAGRKLGNGAVDNMGSTQELWQAFFANPK--------------NPNYPDFKHKDTG 228
           S      R      +D    T   W+    NPK               P +PDFK K  G
Sbjct: 196 SIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGG 255

[Close]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 70  SWKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHV 129
           +++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F  +LA  
Sbjct: 92  AYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGDLAKT 151

Query: 130 ASQHIQKGNQIYVSGRL---------------------QLNFIE-RSNSTEP-QYDQNSN 189
           A++++ K +QI+VSG+L                      LNFI+  S S  P     +S 
Sbjct: 152 AARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFMVMSSSE 211

Query: 190 SVTAGRKLGNGAVDN---MGSTQELWQAFFANPK--------------NPNYPDFKHKDT 232
              +G K           +    + W     NPK               P +PDFK KD+
Sbjct: 212 KEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDS 271

[Close]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot
Match: Q8DCJ0 (Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=ssb PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 37/137 (27.01%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 77  NSVSLIGTVGVPVELKHLPSGKDVASTRLA---VWKSST------ETSWIKLTFWNELAH 136
           N V L+G +G   E++++PSG  VA+  +A    W+         +T W ++T + +LA 
Sbjct: 7   NKVILVGNLGNDPEIRYMPSGGAVANITVATSETWRDKATGEPREKTEWHRVTLYGKLAE 66

Query: 137 VASQHIQKGNQIYVSGRLQL------NFIERSNSTEPQYDQNSNSVTAGRKLGNGAVDNM 196
           VA ++++KG+Q+Y+ G+LQ       N  +R ++       N      G +   G    M
Sbjct: 67  VAGEYLRKGSQVYIEGQLQTRKWQDQNGQDRYSTEVVVQGYNGIMQMLGGRQQQGGAPAM 126

Query: 197 GSTQELWQAFFANPKNP 199
           G   +  Q  +  P+ P
Sbjct: 127 GGAPQQQQGGWGQPQQP 143

[Close]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot
Match: Q9KUW2 (Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=ssb PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 77  NSVSLIGTVGVPVELKHLPSGKDVASTRLA---VWKSST------ETSWIKLTFWNELAH 136
           N V LIG +G   E++++PSG  VA+  +A    W+         +T W ++T + +LA 
Sbjct: 7   NKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAE 66

Query: 137 VASQHIQKGNQIYVSGRLQ 147
           VA ++++KG+Q+Y+ G+LQ
Sbjct: 67  VAGEYLRKGSQVYIEGQLQ 85

[Close]

BLAST of Sed0005343 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.5e-101
Identity = 202/292 (69.18%), Postives = 220/292 (75.34%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL  SS L SK+SIF+   N+LPISSF P   + +  K LRF   FPKCSAMEN 
Sbjct: 3   MALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENY 62

Query: 70  SNNS-----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS 129
           +N S           WKKELSNSV+LIGTVG+PVELKHLPSGKDVA TRLAVWKSSTETS
Sbjct: 63  TNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 122

Query: 130 WIKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSN 189
           WI LTFW+ELAH+ASQH+QKGNQIYVSGRL                     QLNFIERSN
Sbjct: 123 WIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 182

Query: 190 STEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFK 249
           ST P YDQ+SNS+ AGRK G+GAVDN GSTQELWQAFFANP          KNP YPDFK
Sbjct: 183 STAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 242

Query: 250 HKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           HKDTGEALWVEGR NPPWVKSQLA+LDMRMGSLD+QEAKMANFV +FDFPSY
Sbjct: 243 HKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Sed0005343 vs. ExPASy TrEMBL
Match: A0A6J1DNW7 (protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.5e-100
Identity = 200/290 (68.97%), Postives = 217/290 (74.83%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL+ SS LL KH++ +   N+  I+S S    H DAAK+LRFA RFPKCSAMEN 
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASLS----HLDAAKRLRFARRFPKCSAMENF 62

Query: 70  SNNS----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSW 129
           SN S          W KELSNSVSLIGTVG PVE+KHL SGKDVA TRLAVWKSSTETSW
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 130 IKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSNS 189
           I LTFW+ELAH+A QH+QKGNQI+VSGRL                     QLNFIERS S
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 190 TEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP---------KNPNYPDFKHK 249
           T P +DQ+SNS+ AGRKLGNGA DNMGSTQELWQAFFANP         KNP YPDFKHK
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKNPKYPDFKHK 242

Query: 250 DTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           DTGEALWVEGR NPPWVKSQLA+LDMRMGSLDEQEAKMANFV N DFPSY
Sbjct: 243 DTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Sed0005343 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.5e-100
Identity = 200/291 (68.73%), Postives = 217/291 (74.57%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           MAL+QTL+ SS LL KH++ +   N+  I+S S    H DAAK+LRFA RFPKCSAMEN 
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASLS----HLDAAKRLRFARRFPKCSAMENF 62

Query: 70  SNNS----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETSW 129
           SN S          W KELSNSVSLIGTVG PVE+KHL SGKDVA TRLAVWKSSTETSW
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 130 IKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSNS 189
           I LTFW+ELAH+A QH+QKGNQI+VSGRL                     QLNFIERS S
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 190 TEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFKH 249
           T P +DQ+SNS+ AGRKLGNGA DNMGSTQELWQAFFANP          KNP YPDFKH
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 250 KDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           KDTGEALWVEGR NPPWVKSQLA+LDMRMGSLDEQEAKMANFV N DFPSY
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Sed0005343 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.5e-100
Identity = 199/292 (68.15%), Postives = 218/292 (74.66%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           +AL+QTLT SS   SK+SIF+   N+L ISSF P   + +  K LRFATRFPKCSAMEN 
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 70  SNNS-----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS 129
           +N S           WKKELSNSV+LIGTVG+PVELKHLPSGKDVA TRLAVWKSSTETS
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 130 WIKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSN 189
           WI LTFW+ELAH+ASQH+QKGNQIYVSGRL                     QLNFIERSN
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 190 STEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFK 249
           ST P YDQ+SNS+ AGRK  +GAVDN  STQELWQAFFANP          KNP YPDFK
Sbjct: 185 STAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 244

Query: 250 HKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           HKDTGEALWVEGR NPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 245 HKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Sed0005343 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.2e-99
Identity = 198/292 (67.81%), Postives = 218/292 (74.66%), Query Frame = 0


Query: 10  MALKQTLTFSSPLLSKHSIFA---NKLPISSFSPCLLHFDAAKQLRFATRFPKCSAMENL 69
           +AL+QTLT SS   SK+SIF+   N+L ISSF P   + +  K LRFATRFPKCSAMEN 
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 70  SNNS-----------WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS 129
           +N S           WKKELSNSV+LIGTVG+PVELKHLPSGKDVA TRLAVWKSSTETS
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 130 WIKLTFWNELAHVASQHIQKGNQIYVSGRL---------------------QLNFIERSN 189
           WI LTFW+ELAH+ASQH+QKGNQIYVSGRL                     QLNFIERSN
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 190 STEPQYDQNSNSVTAGRKLGNGAVDNMGSTQELWQAFFANP----------KNPNYPDFK 249
           ST P YDQ+SNS+ AGRK  +GAVDN  STQELWQAFFANP          K+P YPDFK
Sbjct: 185 STAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYPDFK 244

Query: 250 HKDTGEALWVEGRNNPPWVKSQLAILDMRMGSLDEQEAKMANFVNNFDFPSY 257
           HKDTGEALWVEGR NPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 245 HKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Sed0005343 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-12
Identity = 58/204 (28.43%), Postives = 90/204 (44.12%), Query Frame = 0


Query: 72  KKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWK--SSTETSWIKLTFWNELAHVA 131
           K  L NSVSL+G V   +++ +    +    T L V    +   +  I L  W+ +A   
Sbjct: 51  KFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTC 110

Query: 132 SQHIQKGNQIYVSGRLQ------------LNFIERSNSTEPQYDQNSNSVTAGRKLGNG- 191
             H++  + I VSGRL+            LN   +    E  Y     S     ++    
Sbjct: 111 IAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSHVLDSQISKNP 170

Query: 192 ---AVDNMGSTQE----LWQAFFANP----------KNPNYPDFKHKDTGEALWVEGRNN 244
                D++  +++    LWQ FF+NP          KNP  PDFKHKDTGEALW+   + 
Sbjct: 171 KTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWL-CSDL 230

[Close]

BLAST of Sed0005343 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11
Identity = 55/198 (27.78%), Postives = 84/198 (42.42%), Query Frame = 0


Query: 71  WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHVA 130
           +K E+SN ++LIG V  PV+      GK  A T ++    S  ++ WI + F  +LA +A
Sbjct: 76  YKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGDLAKIA 135

Query: 131 SQHIQKGNQIYVSGRL---------------------QLNFIERSNST-----EPQYDQN 190
            QH++K ++I+VSG+L                      LNF++ + ST      P+ +  
Sbjct: 136 VQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPPEKEVT 195

Query: 191 SNSVTAGRKLGNGAVDNMGSTQELWQAFFANPK--------------NPNYPDFKHKDTG 228
           S      R      +D    T   W+    NPK               P +PDFK K  G
Sbjct: 196 SIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGG 255

[Close]

BLAST of Sed0005343 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11
Identity = 55/198 (27.78%), Postives = 84/198 (42.42%), Query Frame = 0


Query: 71  WKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHVA 130
           +K E+SN ++LIG V  PV+      GK  A T ++    S  ++ WI + F  +LA +A
Sbjct: 76  YKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGDLAKIA 135

Query: 131 SQHIQKGNQIYVSGRL---------------------QLNFIERSNST-----EPQYDQN 190
            QH++K ++I+VSG+L                      LNF++ + ST      P+ +  
Sbjct: 136 VQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPPEKEVT 195

Query: 191 SNSVTAGRKLGNGAVDNMGSTQELWQAFFANPK--------------NPNYPDFKHKDTG 228
           S      R      +D    T   W+    NPK               P +PDFK K  G
Sbjct: 196 SIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGG 255

[Close]

BLAST of Sed0005343 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-10
Identity = 56/203 (27.59%), Postives = 88/203 (43.35%), Query Frame = 0


Query: 70  SWKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHV 129
           +++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F  +LA  
Sbjct: 92  AYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGDLAKT 151

Query: 130 ASQHIQKGNQIYVSGRL---------------------QLNFIE-RSNSTEP-QYDQNSN 189
           A++++ K +QI+VSG+L                      LNFI+  S S  P     +S 
Sbjct: 152 AARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFMVMSSSE 211

Query: 190 SVTAGRKLGNGAVDN---MGSTQELWQAFFANPK--------------NPNYPDFKHKDT 232
              +G K   G       +    + W     NPK               P +PDFK KD+
Sbjct: 212 KEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDS 271

[Close]

BLAST of Sed0005343 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09
Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 70  SWKKELSNSVSLIGTVGVPVELKHLPSGKDVASTRLAVWKSSTETS-WIKLTFWNELAHV 129
           +++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F  +LA  
Sbjct: 92  AYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGDLAKT 151

Query: 130 ASQHIQKGNQIYVSGRL---------------------QLNFIE-RSNSTEP-QYDQNSN 189
           A++++ K +QI+VSG+L                      LNFI+  S S  P     +S 
Sbjct: 152 AARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFMVMSSSE 211

Query: 190 SVTAGRKLGNGAVDN---MGSTQELWQAFFANPK--------------NPNYPDFKHKDT 232
              +G K           +    + W     NPK               P +PDFK KD+
Sbjct: 212 KEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDS 271

The following BLAST results are available for this feature:

BLAST of Sed0005343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	1.2e-103	71.82	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_004146958.1	9.3e-101	69.18	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
XP_022155803.1	1.3e-99	68.97	protein OSB2, chloroplastic-like isoform X2 [Momordica charantia]	[more]
XP_008451268.1	1.7e-99	68.15	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
XP_022155802.1	1.7e-99	68.73	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0005343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	1.9e-11	28.43	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GWJ4	7.8e-10	27.78	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8GXH3	3.3e-08	27.09	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q8DCJ0	1.2e-07	27.01	Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) OX=21689...	[more]
Q9KUW2	2.8e-07	35.44	Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC ...	[more]

BLAST of Sed0005343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W2	4.5e-101	69.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A6J1DNW7	6.5e-100	68.97	protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DQC6	8.5e-100	68.73	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3BRV3	8.5e-100	68.15	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	3.2e-99	67.81	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]

BLAST of Sed0005343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	1.3e-12	28.43	Primosome PriB/single-strand DNA-binding	[more]
AT5G44785.2	5.6e-11	27.78	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	5.6e-11	27.78	organellar single-stranded DNA binding protein 3	[more]
AT4G20010.2	4.7e-10	27.59	plastid transcriptionally active 9	[more]
AT4G20010.1	2.3e-09	27.09	plastid transcriptionally active 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 77..150 e-value: 1.7E-15 score: 55.7
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 62..145 coord: 146..249
None	No IPR available	GENE3D	2.40.50.140		coord: 75..197 e-value: 9.3E-18 score: 66.6
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 62..145
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 146..249
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 77..155 e-value: 9.1E-16 score: 57.8
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 75..171 score: 17.787374
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 79..154 e-value: 1.75039E-17 score: 73.4153
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 77..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005343.1	Sed0005343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding