Sed0005306 (gene) Chayote v1

Overview


Name	Sed0005306
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein FBW2-like
Location	LG13: 6859451 .. 6862312 (+)
RNA-Seq Expression	Sed0005306
Synteny	Sed0005306

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTTCCTAGCTTTCTATTCCTCCACCTGCCTCCTTCACAGTCGCCTCACTCTTTCTCGATCTTCAAGAAACTCAAGCCATGGCGATCCAAATTATTAATCTCAAAACTGCTTCATCTTCTTAAATGGTACCATTCTGTTTTTGTTTCTCTTTCGCTTGAATTCGATCATTACATGCTTGTTCTGCTACCTGTGTGTTGATTCATTTCAGTTTCTATTCCGCATGTCGTTCAAATCTGTTCTAGTTTCTGCTCTGGAATTTCGTTTTTGTTTCTACGGTTTTTGTTATGAATACGGGATTTCACGCGGGGTAGCTGATTTTTCGTCAACATCCCGGATTTTTGTGCCCTAACTAATTTGAATCTCATAATTATCTCTGATCGGTTGTTACTCTAATTCTAGGCTTATGAACGTTTGTTTGTTTGTTTCGGATTGAACTGGACTTTTATCCGAAGATCTGGACTGTTTATCGATGATGTATTTTTTAAAAGAATAATTGCTTCCTCTTGGGCTCCAACATGAAATTGTTATGAAAATCGAACAACAATCAAATCAAAACTGCAAAAGAAACGTGAGAACGCATAGAATTTACGTGGTTGATTGCTAACTACGTTCACGGGCAGAGAAGAGAACGGTATTATCGATTTTGGAGATAGGAATACAAAATTTCGATCAACTAGGGTTTTAAGAGAGTTTAGATCTTTGCTCGCTGACCGGGCAGCAAGACCCCCGAATAAATAATCGCAGGGCTTCGAATAGTTCATGGCATATCTCAACCCAAATTCTTGCTGATTTTAAGATAAATTCTTAATTTGGAGGTTTTTCACCCGGTGGCAGAACACAATTTGACTTTGGAGATTGGAGTTAGAGTGAGATGGGTCCCTTTTAATTTGATACAAAAAAATACAGATCAAAGATCGACCATTATTTGCTTTAACCTTTTCCATTGATTGCTTTGTTATGATCAGAATACGAAATATGATGCTTAGTTTCAAACTTTTCTTTTCTTTTTGTAGCTTTGTAAAGGAAGGTAGTAATATCTGATGGATGATTGCGACAATTGGCGCTGGGATGAGCTTCACCCTGATGCATTAGGGCTCATATTTGGGAATTTGTCACTCCAAGAGATTCTTGTTGTAATCCCTATGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCGTATTGCTGGCAGGAGATAGACATTTTGGACTGGAGCGCACTACGACATCCCGACACCGTCAATAGAATGCTTGAAATGTTGTTTACAAGAAGCTCAGGTTCCCACCGCAAGCTCTGTGTTAGCGGTCACCTTAACGACTCGAGTTTGTCCCTGATTGCAGAACAGTGAGTTCAATCGTAACCCCTTGTTCTTGTTTGCTTCTTTAATGCACTGTTGTGTCAGTTGTTCCTGTTATGCACTAACTGAGATTTATCTTCCATATTTGAAGACCATTGTTTAGAAATTATATTGTTTGATCAAATGACCTCTAAAATTGACTATTACTGTTTTTATTAAGGTGATAATAATTATCTTGGTCTTTTTTATTAAAGTGTTGTAGAATTGAATGCTCTAGTTTGACATAAGAAGAGTTCTATCGTTCTTTAGATGGAAAAGAATCCCAATGTTCTTTTATTCAAGTTTCGGGTTCGAGTTTCAAACCAGGATGGAAGGATTTAAAATGCCTAATTTAGAGAAATTTGGAGGGAGAGTGAAAACAACACCATAAGCCTAGGAGAAATTTACTAATTTTCTAAATTGAGTCCACCACAGTCCCCAAGGGGTGATGCTGCAGTCAAGGCTTGGGATTTGAAGGTGTTGCTCTCCATAAAGTCCTAGGTTCGAGACTCATTTGTGACATTAATTTGTGGATACCTCCCGTGTCTCCATCTCTTTTGATGACTCTTGGTGCCTTGCCTAGGAACGGGCATGGTTACACCGGATATAGTAGGGCGAAGCTCGATTTCCTGGTTTTCAAAAAAACTTATATGCTTGATTGAATGTGTCCATCTTCTGTACATTAATATCTTACCTTTCTGATTGACAGTGGAAAAGCTCTTCATACTTTACGGTTACCAGGAAGCGAAATAACCAATTCCATTGTCGAACATGTTGCCGAGAGGTTTTCAGCTGTAACTTATTTGGATTTAAGCTTTTGTAAAAACATCGGAGCACCGGCCCTTGAGGCAATTGGGAGGCATTGTGTGAAGCTCACAGGGTTGCGAAGAGTTATGTGCCCATTTGAACCTGTTGACAGACTTTCTCAAGATGATGAGGCCCTTGCGGTTGCATCGACAATGCATAAGCTTAAGCACCTCGAGATATCCTATTTGCTTATCAATACCGAATCCGTGCTAAAGATCCTCGAGAACTGCCAAGAGCTCGAGTATTTAGATGTGAAAGGGTGTTGGAATTTGATGCTAGATGAGAGGTTCAAGAAGTTTTCGAGGGTGAAGTTGGTCGGTCCATTGGAAGAGTCTTCAGAGACGATCGAATGGAAATCATTGTCAAATTACTCGAGCTCTTCGTCTGGCTACCTGGCTTGGGGTTTTGTGGCTGATGAATTCGATGACCAATTTGAATTGCTGGAGTTTTTTGGAGAAGATGGCTTAAGTGTGGATGATGAGGGATTTTATTATAATAATGAATTTGATTGGCTTGGGCAGTCTCCTTGAATGTTGCTCCTAAATCCTATCAGAGCCCCTGAAATTTGGTCAGTTTTATGGTTATTTACTCTATTTATTGATGCTTTCTCACTCTCATGGATATTTTTAGTTTTCTATCTTTTTTCGCAAGAAATAGGTTGTGATAGTATTTGTAAATTAGAAAATAAAATTGGTATTTATTGAAGTTAGAAAGA

mRNA sequence

CCTTTTCCTAGCTTTCTATTCCTCCACCTGCCTCCTTCACAGTCGCCTCACTCTTTCTCGATCTTCAAGAAACTCAAGCCATGGCGATCCAAATTATTAATCTCAAAACTGCTTCATCTTCTTAAATGCTTTGTAAAGGAAGGTAGTAATATCTGATGGATGATTGCGACAATTGGCGCTGGGATGAGCTTCACCCTGATGCATTAGGGCTCATATTTGGGAATTTGTCACTCCAAGAGATTCTTGTTGTAATCCCTATGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCGTATTGCTGGCAGGAGATAGACATTTTGGACTGGAGCGCACTACGACATCCCGACACCGTCAATAGAATGCTTGAAATGTTGTTTACAAGAAGCTCAGGTTCCCACCGCAAGCTCTGTGTTAGCGGTCACCTTAACGACTCGAGTTTGTCCCTGATTGCAGAACATGGAAAAGCTCTTCATACTTTACGGTTACCAGGAAGCGAAATAACCAATTCCATTGTCGAACATGTTGCCGAGAGGTTTTCAGCTGTAACTTATTTGGATTTAAGCTTTTGTAAAAACATCGGAGCACCGGCCCTTGAGGCAATTGGGAGGCATTGTGTGAAGCTCACAGGGTTGCGAAGAGTTATGTGCCCATTTGAACCTGTTGACAGACTTTCTCAAGATGATGAGGCCCTTGCGGTTGCATCGACAATGCATAAGCTTAAGCACCTCGAGATATCCTATTTGCTTATCAATACCGAATCCGTGCTAAAGATCCTCGAGAACTGCCAAGAGCTCGAGTATTTAGATGTGAAAGGGTGTTGGAATTTGATGCTAGATGAGAGGTTCAAGAAGTTTTCGAGGGTGAAGTTGGTCGGTCCATTGGAAGAGTCTTCAGAGACGATCGAATGGAAATCATTGTCAAATTACTCGAGCTCTTCGTCTGGCTACCTGGCTTGGGGTTTTGTGGCTGATGAATTCGATGACCAATTTGAATTGCTGGAGTTTTTTGGAGAAGATGGCTTAAGTGTGGATGATGAGGGATTTTATTATAATAATGAATTTGATTGGCTTGGGCAGTCTCCTTGAATGTTGCTCCTAAATCCTATCAGAGCCCCTGAAATTTGGTCAGTTTTATGGTTATTTACTCTATTTATTGATGCTTTCTCACTCTCATGGATATTTTTAGTTTTCTATCTTTTTTCGCAAGAAATAGGTTGTGATAGTATTTGTAAATTAGAAAATAAAATTGGTATTTATTGAAGTTAGAAAGA

Coding sequence (CDS)

ATGGATGATTGCGACAATTGGCGCTGGGATGAGCTTCACCCTGATGCATTAGGGCTCATATTTGGGAATTTGTCACTCCAAGAGATTCTTGTTGTAATCCCTATGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCGTATTGCTGGCAGGAGATAGACATTTTGGACTGGAGCGCACTACGACATCCCGACACCGTCAATAGAATGCTTGAAATGTTGTTTACAAGAAGCTCAGGTTCCCACCGCAAGCTCTGTGTTAGCGGTCACCTTAACGACTCGAGTTTGTCCCTGATTGCAGAACATGGAAAAGCTCTTCATACTTTACGGTTACCAGGAAGCGAAATAACCAATTCCATTGTCGAACATGTTGCCGAGAGGTTTTCAGCTGTAACTTATTTGGATTTAAGCTTTTGTAAAAACATCGGAGCACCGGCCCTTGAGGCAATTGGGAGGCATTGTGTGAAGCTCACAGGGTTGCGAAGAGTTATGTGCCCATTTGAACCTGTTGACAGACTTTCTCAAGATGATGAGGCCCTTGCGGTTGCATCGACAATGCATAAGCTTAAGCACCTCGAGATATCCTATTTGCTTATCAATACCGAATCCGTGCTAAAGATCCTCGAGAACTGCCAAGAGCTCGAGTATTTAGATGTGAAAGGGTGTTGGAATTTGATGCTAGATGAGAGGTTCAAGAAGTTTTCGAGGGTGAAGTTGGTCGGTCCATTGGAAGAGTCTTCAGAGACGATCGAATGGAAATCATTGTCAAATTACTCGAGCTCTTCGTCTGGCTACCTGGCTTGGGGTTTTGTGGCTGATGAATTCGATGACCAATTTGAATTGCTGGAGTTTTTTGGAGAAGATGGCTTAAGTGTGGATGATGAGGGATTTTATTATAATAATGAATTTGATTGGCTTGGGCAGTCTCCTTGA

Protein sequence

MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSALRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSIVEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEALAVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLVGPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFYYNNEFDWLGQSP

Homology

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BLAST of Sed0005306 vs. NCBI nr
Match: XP_038906234.1 (F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-like [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.6e-131
Identity = 239/312 (76.60%), Postives = 264/312 (84.62%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCD+ RWDEL PDALGLIF NLSLQEIL+VIP VCKSWRKTVLGPYCWQEIDI+DWS 
Sbjct: 1   MEDCDSRRWDELFPDALGLIFKNLSLQEILLVIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PD+VN+ML++L +RSSG   KLC+S   NDSSLSLIAEHGKALHTLR+P SEITNSI
Sbjct: 61  LRDPDSVNKMLQLLISRSSGYLSKLCISCLPNDSSLSLIAEHGKALHTLRVPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAER SAVT+LDLSFCKNIGAPALEAIG+HC  LTGLRRVMCPFE +DR SQDDEAL
Sbjct: 121 VEQVAERLSAVTFLDLSFCKNIGAPALEAIGKHCANLTGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLK LEI+YLLINTESVLKILENC ELEYLDV+GCWN++LDE+FKKFS+VKLV
Sbjct: 181 AVASTMHKLKQLEIAYLLINTESVLKILENCPELEYLDVQGCWNVILDEKFKKFSKVKLV 240

Query: 241 GPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFYYN 300
           GPLEE SETI W   S+    SSGYL W FV DE DDQF++LEF+GED  SVDDE   + 
Sbjct: 241 GPLEEFSETIRWDGCSD----SSGYLTWDFVVDEIDDQFQMLEFWGEDYRSVDDEEHSFE 300

Query: 301 NEF--DWLGQSP 311
                DWL  SP
Sbjct: 301 EHVYPDWLDGSP 308

[Close]

BLAST of Sed0005306 vs. NCBI nr
Match: XP_022136779.1 (F-box protein FBW2-like [Momordica charantia] >XP_022136781.1 F-box protein FBW2-like [Momordica charantia] >XP_022136782.1 F-box protein FBW2-like [Momordica charantia] >XP_022136783.1 F-box protein FBW2-like [Momordica charantia] >XP_022136784.1 F-box protein FBW2-like [Momordica charantia] >XP_022136785.1 F-box protein FBW2-like [Momordica charantia] >XP_022136786.1 F-box protein FBW2-like [Momordica charantia])

HSP 1 Score: 477.6 bits (1228), Expect = 8.0e-131
Identity = 243/319 (76.18%), Postives = 267/319 (83.70%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M++ +  RWDEL PDALGLIF NLSLQEILV IP VCKSWRKTVLGPYCWQEIDI+DWS 
Sbjct: 1   MENSEIRRWDELLPDALGLIFRNLSLQEILVDIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDTVNRML+ML TR+SGS  KLCVSG  NDSSLSLIAEHGK LH LRLP SEITNSI
Sbjct: 61  LRDPDTVNRMLQMLITRNSGSLHKLCVSGLPNDSSLSLIAEHGKDLHNLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VA+RFSAVT+LDLSFCK IGAPALEA G+HC  LTGL+RVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVADRFSAVTFLDLSFCKTIGAPALEAFGKHCPNLTGLKRVMCPFEAIDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVLKILENC ELEYLDV GCWN++LDE+FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPELEYLDVLGCWNVVLDEKFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGED--GLSVDDEGFY 300
           GPLEE SET  W + SNY SSSSGY+ W FVA + DDQFE+LEFFG+D      DD GFY
Sbjct: 241 GPLEEYSETNGWDACSNY-SSSSGYI-WDFVAGDLDDQFEMLEFFGDDYRSADADDVGFY 300

Query: 301 YNNEF-------DWLGQSP 311
           Y+ ++       DWLG SP
Sbjct: 301 YDYDYGVEHGYPDWLGGSP 317

[Close]

BLAST of Sed0005306 vs. NCBI nr
Match: XP_023553120.1 (F-box protein FBW2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130
Identity = 241/303 (79.54%), Postives = 260/303 (85.81%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCDN  WDEL PDALGLIF NLSLQEILVVIP VCKSWRKTVLGPYCWQEIDILDWS 
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDT+NRML+ML +R SGS  KLCVS   NDS LSLIAEHG ALHTLRLP SEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAERFSAVT+LDLSFCKNIGA ALEAIG+HC  LTGLRRVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVLKILENC +LEYLDV+GCWN++ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSL--SNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFY 300
           GPLEE SE+  W     SNY SSSSGYLAW FVADE DD+FE+LEFFG+D  SVDD    
Sbjct: 241 GPLEEISESNRWDDFDCSNY-SSSSGYLAWDFVADELDDEFEMLEFFGDDYRSVDDMDHA 300

Query: 301 YNN 302
           Y++
Sbjct: 301 YSD 302

[Close]

BLAST of Sed0005306 vs. NCBI nr
Match: XP_022929357.1 (F-box protein FBW2-like [Cucurbita moschata] >XP_022929358.1 F-box protein FBW2-like [Cucurbita moschata] >XP_022929359.1 F-box protein FBW2-like [Cucurbita moschata] >KAG6577308.1 F-box protein FBW2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015398.1 F-box protein FBW2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130
Identity = 241/303 (79.54%), Postives = 260/303 (85.81%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCDN  WDEL PDALGLIF NLSLQEILVVIP VCKSWRKTVLGPYCWQEIDILDWS 
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDT+NRML+ML +R SGS  KLCVS   NDS LSLIAEHG ALHTLRLP SEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAERFSAVT+LDLSFCKNIGA ALEAIG+HC  LTGLRRVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVL+ILENC +LEYLDV+GCWN++ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSL--SNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFY 300
           GPLEE SE+  W     SNY SSSSGYLAW FVADE DD+FE+LEFFGED  SVDD    
Sbjct: 241 GPLEEISESNRWDDFDCSNY-SSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHA 300

Query: 301 YNN 302
           Y++
Sbjct: 301 YSD 302

[Close]

BLAST of Sed0005306 vs. NCBI nr
Match: XP_022984943.1 (F-box protein FBW2-like [Cucurbita maxima] >XP_022984944.1 F-box protein FBW2-like [Cucurbita maxima] >XP_022984945.1 F-box protein FBW2-like [Cucurbita maxima])

HSP 1 Score: 473.4 bits (1217), Expect = 1.5e-129
Identity = 240/303 (79.21%), Postives = 259/303 (85.48%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCDN  WDEL PDALGLIF NLSLQEILVVIP VCKSWRKTVLGPYCWQEIDILDWS 
Sbjct: 1   MEDCDNRHWDELSPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDT+NRML+ML +R SGS  KLCVS   NDS LSLIAEHG ALHTLRLP SEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAERFSAVT+LDLSFCKNIGA ALEAIG+HC  LTGLRRVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVL+ILENC +LE LDV+GCWN++ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLELLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSL--SNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFY 300
           GPLEE SE+  W     SNY SSSSGYLAW FVADE DD+FE+LEFFGED  SVDD    
Sbjct: 241 GPLEEISESNRWDDFDCSNY-SSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHA 300

Query: 301 YNN 302
           Y++
Sbjct: 301 YSD 302

[Close]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot
Match: Q9ZPE4 (F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

[Close]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-21
Identity = 87/297 (29.29%), Postives = 132/297 (44.44%), Query Frame = 0


Query: 5   DNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDW------ 64
           D   W  L P+ L  I   L++QE+      V KSW      PY W   D+  W      
Sbjct: 4   DGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPE 63

Query: 65  -SALRHPD---TVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGS 124
            + L  P+    V+ ML  +   S G   K+ V  H +D +LS  A+    L  L +  S
Sbjct: 64  STHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVR-HCSDHALSYAADRCPNLQVLAIRSS 123

Query: 125 -EITNSIVEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVM--------- 184
             +T++ +  +A R  ++  LD+S+C  I    L  IGR+C  L  L+R +         
Sbjct: 124 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIG 183

Query: 185 -CPFEPVDRLSQ--DDEALAVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKG 244
             P E +D   Q  D EA A+   M  L+HLEI +  ++ + +  I E C +LEYLD+ G
Sbjct: 184 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 243

Query: 245 CWNLMLDERFKKFSRVKLVGPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQ 279
           C +L   +     SR+K    L+E  +   +   S   + +  Y  W    + FD Q
Sbjct: 244 CVHLSSRDITSNVSRLKW---LKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQ 296

[Close]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.0e-19
Identity = 77/256 (30.08%), Postives = 125/256 (48.83%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+  ++  W EL P+    I   L   EIL     VC+SWR+    P  W++ID+ +   
Sbjct: 11  MEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD 70

Query: 61  LRHPD-TVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRL-PGSEIT- 120
           L   D  +  M      RS G    + +        L+ IA     L +LRL   S+IT 
Sbjct: 71  LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITD 130

Query: 121 NSIVEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDD 180
           +  VE V +    +  L+LS+C +    +L  +G+ C+ +  L+    P     +   DD
Sbjct: 131 DGFVEAVVK--LPLEELELSYC-SFSVESLRVVGQCCLNMKTLKLNKHP-----QKENDD 190

Query: 181 EALAVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLML--DERFKKFS 240
           +ALA+A TM KL+HL++    ++   +  IL+NC  LE+LD++ C+N+ L  D + + F 
Sbjct: 191 DALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFE 250

Query: 241 RVKLVGPLEESSETIE 252
            VK+V    +S   I+
Sbjct: 251 SVKVVRHPNDSIHDID 258

[Close]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 68/236 (28.81%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 9   WDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDI---LDWSALRHPD 68
           W EL       I   L   EIL     VCK W +    P  W++IDI    D +A ++  
Sbjct: 181 WAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKY-- 240

Query: 69  TVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGS-EITNSIVEHV 128
            +  M      RS G   ++ +  +  +  +  IA+    L +L L     IT+  V   
Sbjct: 241 DLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKA 300

Query: 129 AERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEALAVAS 188
             +   + YL++S+C   G  +L  IGR C  L  L+    P         DD A A+A 
Sbjct: 301 VSKVPLLEYLEVSYCLFSG-ESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAE 360

Query: 189 TMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKK--FSRVK 239
           +M +L+HL++    +  + +  IL+ C  LE+LD++ C+N+ L    KK  F R+K
Sbjct: 361 SMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIK 413

[Close]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.7e-15
Identity = 65/222 (29.28%), Postives = 102/222 (45.95%), Query Frame = 0


Query: 9   WDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSALRHPDTVN 68
           W EL PD L  I   LS  EIL     VC+SWR+    P  W+ ID+ +   L     + 
Sbjct: 27  WAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCIYAME 86

Query: 69  RMLEMLFTRSSGSHRKLCVS--GHLNDSSLSLIAEHGKALHTLRLPGSEITNSIVEHVAE 128
                +   S G   +  +        S L+ +AE    L  LR+ G +IT+  +     
Sbjct: 87  ACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQITSVGIFEAIV 146

Query: 129 RFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQ-DDEALAVAST 188
           +   +  L+L +C +I     + IG+ C  L  L+ V         L++ D++ALA+A T
Sbjct: 147 KLPLLEELELLYC-SIEEEHFKTIGQACPNLKTLKLVGF----WSHLNESDNDALAIADT 206

Query: 189 MHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLML 228
           M  L HL++    +    +  IL+ C  LE LD++ C+N+ L
Sbjct: 207 MPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINL 243

[Close]

BLAST of Sed0005306 vs. ExPASy TrEMBL
Match: A0A6J1C8I0 (F-box protein FBW2-like OS=Momordica charantia OX=3673 GN=LOC111008399 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.9e-131
Identity = 243/319 (76.18%), Postives = 267/319 (83.70%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M++ +  RWDEL PDALGLIF NLSLQEILV IP VCKSWRKTVLGPYCWQEIDI+DWS 
Sbjct: 1   MENSEIRRWDELLPDALGLIFRNLSLQEILVDIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDTVNRML+ML TR+SGS  KLCVSG  NDSSLSLIAEHGK LH LRLP SEITNSI
Sbjct: 61  LRDPDTVNRMLQMLITRNSGSLHKLCVSGLPNDSSLSLIAEHGKDLHNLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VA+RFSAVT+LDLSFCK IGAPALEA G+HC  LTGL+RVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVADRFSAVTFLDLSFCKTIGAPALEAFGKHCPNLTGLKRVMCPFEAIDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVLKILENC ELEYLDV GCWN++LDE+FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPELEYLDVLGCWNVVLDEKFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGED--GLSVDDEGFY 300
           GPLEE SET  W + SNY SSSSGY+ W FVA + DDQFE+LEFFG+D      DD GFY
Sbjct: 241 GPLEEYSETNGWDACSNY-SSSSGYI-WDFVAGDLDDQFEMLEFFGDDYRSADADDVGFY 300

Query: 301 YNNEF-------DWLGQSP 311
           Y+ ++       DWLG SP
Sbjct: 301 YDYDYGVEHGYPDWLGGSP 317

[Close]

BLAST of Sed0005306 vs. ExPASy TrEMBL
Match: A0A6J1EMK2 (F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131
Identity = 241/303 (79.54%), Postives = 260/303 (85.81%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCDN  WDEL PDALGLIF NLSLQEILVVIP VCKSWRKTVLGPYCWQEIDILDWS 
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDT+NRML+ML +R SGS  KLCVS   NDS LSLIAEHG ALHTLRLP SEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAERFSAVT+LDLSFCKNIGA ALEAIG+HC  LTGLRRVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVL+ILENC +LEYLDV+GCWN++ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSL--SNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFY 300
           GPLEE SE+  W     SNY SSSSGYLAW FVADE DD+FE+LEFFGED  SVDD    
Sbjct: 241 GPLEEISESNRWDDFDCSNY-SSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHA 300

Query: 301 YNN 302
           Y++
Sbjct: 301 YSD 302

[Close]

BLAST of Sed0005306 vs. ExPASy TrEMBL
Match: A0A6J1JC23 (F-box protein FBW2-like OS=Cucurbita maxima OX=3661 GN=LOC111483063 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.3e-130
Identity = 240/303 (79.21%), Postives = 259/303 (85.48%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DCDN  WDEL PDALGLIF NLSLQEILVVIP VCKSWRKTVLGPYCWQEIDILDWS 
Sbjct: 1   MEDCDNRHWDELSPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR PDT+NRML+ML +R SGS  KLCVS   NDS LSLIAEHG ALHTLRLP SEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VAERFSAVT+LDLSFCKNIGA ALEAIG+HC  LTGLRRVMCPFE +D+ SQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           AVASTMHKLKHLEI+YLLINTESVL+ILENC +LE LDV+GCWN++ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLELLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEESSETIEWKSL--SNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFY 300
           GPLEE SE+  W     SNY SSSSGYLAW FVADE DD+FE+LEFFGED  SVDD    
Sbjct: 241 GPLEEISESNRWDDFDCSNY-SSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHA 300

Query: 301 YNN 302
           Y++
Sbjct: 301 YSD 302

[Close]

BLAST of Sed0005306 vs. ExPASy TrEMBL
Match: A0A1S4E0L3 (F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 7.0e-125
Identity = 227/312 (72.76%), Postives = 257/312 (82.37%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DC + RWDEL PDALGLIF NLSLQEILVVIP VCKSWR+TVLGPYCWQEIDI+DWS 
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR   +VN ML++L +RSSG  RKLC+S   NDSSLSLIA++GK LHTLR+P SEITNS 
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VA+R SAVT+LDLSFCKNIGAPALEAIG+HCV L GLRRVMCPFE +DR SQDDEAL
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           A+ASTM KLK LEI+YLL+NTESVLKILENC ELEYLDV+GCWN++LDERFKKFS+VKL+
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFYYN 300
           GPLEE SE I W   S+    SS YL W FVADE DDQF++LEF GED  SVDDE + + 
Sbjct: 241 GPLEEFSEMIRWDGCSD----SSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFE 300

Query: 301 NEF--DWLGQSP 311
                DW  +SP
Sbjct: 301 EHVYPDWPEESP 308

[Close]

BLAST of Sed0005306 vs. ExPASy TrEMBL
Match: A0A5D3CAA0 (F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1300G00100 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 7.0e-125
Identity = 227/312 (72.76%), Postives = 257/312 (82.37%), Query Frame = 0


Query: 1   MDDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSA 60
           M+DC + RWDEL PDALGLIF NLSLQEILVVIP VCKSWR+TVLGPYCWQEIDI+DWS 
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRHPDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 120
           LR   +VN ML++L +RSSG  RKLC+S   NDSSLSLIA++GK LHTLR+P SEITNS 
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 180
           VE VA+R SAVT+LDLSFCKNIGAPALEAIG+HCV L GLRRVMCPFE +DR SQDDEAL
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERFKKFSRVKLV 240
           A+ASTM KLK LEI+YLL+NTESVLKILENC ELEYLDV+GCWN++LDERFKKFS+VKL+
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEESSETIEWKSLSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDEGFYYN 300
           GPLEE SE I W   S+    SS YL W FVADE DDQF++LEF GED  SVDDE + + 
Sbjct: 241 GPLEEFSEMIRWDGCSD----SSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFE 300

Query: 301 NEF--DWLGQSP 311
                DW  +SP
Sbjct: 301 EHVYPDWPEESP 308

[Close]

BLAST of Sed0005306 vs. TAIR 10
Match: AT4G08980.1 (F-BOX WITH WD-40 2 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

[Close]

BLAST of Sed0005306 vs. TAIR 10
Match: AT4G08980.3 (F-BOX WITH WD-40 2 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

[Close]

BLAST of Sed0005306 vs. TAIR 10
Match: AT4G08980.2 (F-BOX WITH WD-40 2 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

[Close]

BLAST of Sed0005306 vs. TAIR 10
Match: AT4G08980.4 (F-BOX WITH WD-40 2 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

[Close]

BLAST of Sed0005306 vs. TAIR 10
Match: AT4G08980.5 (F-BOX WITH WD-40 2 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 2   DDCDNWRWDELHPDALGLIFGNLSLQEILVVIPMVCKSWRKTVLGPYCWQEIDILDWSAL 61
           +DC+   WDEL PDALGLIF +L LQE+L V+P VCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  RH-PDTVNRMLEMLFTRSSGSHRKLCVSGHLNDSSLSLIAEHGKALHTLRLPGSEITNSI 121
            H  D ++RMLEML  RS+GS RKL V+G  NDS  S IA+H  +L TL++P S +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEHVAERFSAVTYLDLSFCKNIGAPALEAIGRHCVKLTGLRRVMCPFEPVDRLSQDDEAL 181
           V +VAE+ S++T+LDLS+C  IG  A++AIG+HC  L    R M P +    +S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEISYLLINTESVLKILENCQELEYLDVKGCWNLMLDERF--KKFSRVK 241
           A+A+TM KLK LEI+Y  ++TE VLKIL  C  LE+L+++GCW++ LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEESSETIEWKS-LSNYSSSSSGYLAWGFVADEFDDQFELLEFFGEDGLSVDDE 301
           ++GP  +       +W+   S+Y S  S YLAW F  D    +F   EF  E G    D+
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF--EHGW---DD 302

The following BLAST results are available for this feature:

BLAST of Sed0005306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906234.1	1.6e-131	76.60	F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-l...	[more]
XP_022136779.1	8.0e-131	76.18	F-box protein FBW2-like [Momordica charantia] >XP_022136781.1 F-box protein FBW2...	[more]
XP_023553120.1	1.8e-130	79.54	F-box protein FBW2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022929357.1	1.8e-130	79.54	F-box protein FBW2-like [Cucurbita moschata] >XP_022929358.1 F-box protein FBW2-...	[more]
XP_022984943.1	1.5e-129	79.21	F-box protein FBW2-like [Cucurbita maxima] >XP_022984944.1 F-box protein FBW2-li...	[more]

BLAST of Sed0005306 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPE4	1.1e-71	49.35	F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1	[more]
Q9FDX1	9.1e-21	29.29	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9M0U9	5.0e-19	30.08	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9S9V9	6.8e-16	28.81	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9M0U6	5.7e-15	29.28	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]

BLAST of Sed0005306 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8I0	3.9e-131	76.18	F-box protein FBW2-like OS=Momordica charantia OX=3673 GN=LOC111008399 PE=4 SV=1	[more]
A0A6J1EMK2	8.6e-131	79.54	F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1	[more]
A0A6J1JC23	7.3e-130	79.21	F-box protein FBW2-like OS=Cucurbita maxima OX=3661 GN=LOC111483063 PE=4 SV=1	[more]
A0A1S4E0L3	7.0e-125	72.76	F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1	[more]
A0A5D3CAA0	7.0e-125	72.76	F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0005306 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08980.1	8.1e-73	49.35	F-BOX WITH WD-40 2	[more]
AT4G08980.3	8.1e-73	49.35	F-BOX WITH WD-40 2	[more]
AT4G08980.2	8.1e-73	49.35	F-BOX WITH WD-40 2	[more]
AT4G08980.4	8.1e-73	49.35	F-BOX WITH WD-40 2	[more]
AT4G08980.5	8.1e-73	49.35	F-BOX WITH WD-40 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 131..150 e-value: 0.29 score: 11.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 53..245 e-value: 2.6E-24 score: 87.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..52 e-value: 4.0E-7 score: 31.8
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 5..280
None	No IPR available	PANTHER	PTHR16134:SF111	F-BOX PROTEIN FBW2	coord: 5..280
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 79..226
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 9..53 e-value: 2.6E-4 score: 20.8
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 5..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005306.1	Sed0005306.1	mRNA
Sed0005306.2	Sed0005306.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding