Sed0005298 (gene) Chayote v1

Overview


Name	Sed0005298
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein OSB1, mitochondrial-like
Location	LG11: 24633282 .. 24638799 (+)
RNA-Seq Expression	Sed0005298
Synteny	Sed0005298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACGAATCCTAAAACCCTAAACCAGTTTTGGGACACGTCACAAATAATGCCGCCAAGTACTACTTCGAAGCTACCGGGAAACTCCGCCGAGAAAACTAGACTGTACTGATCGCCGTCAAGATCACCGTCGCCGGAGCTCCTCACCACCGCCGATTACTATGAGGGCCGCCGTTCGCCTTCTCGTCCCTATTAGACAAGTAGCTGCATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTCCTTAGCAGTAAGCACCGACGCGAAGACCTTTGTCGCCACTGGTGCCGGTAACGGAGGTTCGGTACACAGGAATCGCCCGAAATTTAAGTGGAACTCGGCCAATTTCTTTGGTACAGTCGAACAGCCCCTTAAGGTGCTTACTAGGAGTGGCAACACAGTTTATGCTTGGACATTTCTTCGGGCTAAAGTCTCCCCGGATTCTGATAGCAGTTCTAGGTACATAGTTACATGCGTTTTTCTGTATTCTTGGGTTTAATCATCCTTAGAACTGTTTTATGATCACCACGTTCTTTGTTTGTTTTTTATTTTTGTTGTTTCGTTGATTCTACTGCTGTGTTCTGTACCTTCTTTTGTATTGTTATGAAAACAGAAACAACAGTTAACGAAAACGGTTAGAAACTTGAGAGAAAACATTGTGGTTCACTATGGGTTAACTAAAGTCTCCAAGGGGTGGTGCAGTGGTTGAAGACTTGGGTTTTGAGGGTATGCTCCTCTCAAGGTCCCGAGTTCGAGTCTTCTCTGTTACAGTACTCCTTCGATGTCTCCGGTACCTGATCTAAGAACGGGCGTGGTTACCCGTGTTTCAAAAAAACTATGGGTTAGCTACATCTTCCAGTAGAGGAGAGAATTGTTTTATTAAAGAGAATACGAAATAAAGAGTGTCGATCAACTGGGGCTAGAGTTTCAAGAGAGTTTATAGACTGCACTCTCATCAAACTCTATTATAAATAGATCCAAATACATAAAGCCCAAATACAAAAAACCATTAAACCAAATACGAGATTGCTGCTCACTGACCGGGCGGCAACACCCTCAACTAAATAATGGTGGGCATCAAAGAGTTCAGGGCATATCTCCACATGTATGTGTTCTGTTTTGTTTGAATCGACAATCAAGCACAGTGAATATAGTAGGCATTTCTTTGTATTGGATGCACTTCAATGATCAAGGACATCTAAGTTTTGAATTCACTCTATTCATCACATCGCTTCCTGCTCAGAACCTATTATTAAAAAGTTTTCCCTTTAGTATCTGCCTAAATTCCCCGGTATTGGTTCGTGATTTTATACATTTATGTGTGCAGGATTTTACTGAAACTGTGGGAAGAAATGGCTGAATCACACCTTGAGCGTCTCAAACCAAATGACTATATTTATGTTGCTGGTACTTTAGAATCTTATAAGAAGGCTGATAAGTGCGGGAAGTCCTATTTATCTTACGAGGTTGGATGCTCGAGTATTTAGATGAAGACATTCTGAAATTTTTTTCATATTTTTTATCTTGCATTTACATTTTGGCGTTCGCATCTTGTCCATGGTATTGGAGCTAATTTTCTTTTGCATCTGGCTAAGAATAATTTCATTGGACTAGCTTTTTATTTTATGAATCTTGTATTGGCATTTGATCTTTCAAGAAGTTTTCATGTTTAATATTTTCATTGTCAAAATTTTCACTACTCTGGTATGGTGGAATCCTCGCCAGTTAGGGTTCTGTTTTCCTTTTAAACCTTCGAGGATCTTCTGATCATTATAGTATTTAATAAAAAGAACATGCAGGATATTAATATATTTAGTTTAGGAAAGTGGCACTAGATTGAGAGTGAATTATCAATTAGATCTATATTGATATCAAAAGTTAAAAAAAATTACAAGATAAGCCAAGTCTTGAATCTTGATAGGAACTTAAAACCTCCCCTCTCTAGAGAATATTCTATTGAGCGTACTAAACCTTCACTCAATATTTTGATACCCCTTCGGCTTCCACTCACCTTCTCTATTCATAACTAAACTCTCTAACTAATTGCTTATATGCCCCTCTATAATATTCCTAATTCTTTCTAGGCCCAAACCTATCAAGTTACTTCAATCTGGAAACTGAAAGATGTGTTTGTATTTTCAGGATCAGTTTGGATTGAACATTTAATCGTTCATCATTTCAATTCAGATGCTGTCCTCCATCTCTGTTCTTTACTACTCAAACACATTATCCATTTCATTTTTTTTCATCTGTGACCAGGGAGTTATAATTCTTTCTGCAAATTCGACTAACTGCCTTATGTAATAATTTGAAATCCTTACTGTAATTTCTGTTGAGTCAAGGAGTTCCTTCCTTCCCCTCTCTTTCATAAACTTTTTTCCAAGTATTTTTTTTTTGTCGCAAAATGAATATGGTGTATGCATATTCAACAGGGTTATACCTGAAGGTTCCTACTTTATCTGTTTGTTATATTTGATTTCTATGCCCATTGTTTATTCCTGCAGTTAACTGTGTCAGAGTTGAATTACATAGTACAAAATGCTCCGGGCTCAAAAAGTCAAAATTATGTAGGCATGCTACATGAAGAAGGTATGCTTTGAATTTTTTTCATTTCTAGTTGATGTAATCTATTAGTTATAAATAAAAATAATTAAAATCTCTTGTTTAACTGATGAAAAGTTAATTGGGTGAACGGTGGAATTCCTAATTTTACTGGTGTGATGTCGAGAGGGCATTCCATGGCATCTGATTTATAAAAAGGAAGATTTTTCTTGCTTCCCTATTCATGTATTTGTGCAATTTATGAAACATCCAGAAAATATGTTTAGTTGGACACTGTGTGTTTCTTTCCCAAGTCTATGCAATGCGTAACATTAAAGAGTTTAGTCTTACAGTCTCAAGCTCAACTCCAAGTGTACAATCTATGTTTTGCGATTAACTAAGTTCATTTTTGGGGACAAGCTTAGGGAAAAGAGTGTTCTATACTATATATATTTGGTATATGATAGATAGAGTGCAGTGTAAAAATTCCTTCCTCATTTTTCTTGGATCTGCCGTATGTGCAAACAGTGTTTTAAAAGGCGCGCCTAGGCTCAAGTCCCACCTTTTGCGCCTTAATTGTCCCAGGCCAGGCGCGTATAATAAGGCGCGCGCCTTATGGCGCCTTACGTGAAGCCCCAGGCGCCAAAAGGCGCGCGCCTCGTGGGCTTTTTAATTTTCCTTTGCGCTTTTTGTATTTCAGATCCCCGTACTAGGTCATTCGAAGCGCGTGAAGGTTGATAGTTGAATATTATGTATGTTTTTATATATTATTCTTGGTTAAAACTTCATTTATGTCCATGCAAAGTGTTTTTATTGTGTATACACACATATATATAAATTTTGTGTGTTTTTTTATATAGTGCGCCTTAAGTAAAAAAGCCCTCGCCTTTTGGTGCGCCTTGCGCCTCAGGCTCCAGAGGGCCATTGCGCCTTAGTGCGCCTTGCGCTTTTTAAAACACTGTGTGCAAAGTTATTCAGAAACGATGAAGCAACTTTTCATCCATTGTCATTTTGCTGCTGTGAGGTATCTATCCACAACTATGTAATTTAATTTGTCCACAAGGGGTGGTGTAGTGGTTGAAGACTTGGGTTTTGCGGATATGCTCCCCTCAAGGTCTCGAGATCGAGTCTCCGCTGTGACATTATTCCTTCGATGCTTGGCCTAGGGACGGGTGTGGTTACCCTTGTTTCAAAAAAATTATGTAATTTAATTCGCAAAAGAGCCATAAAAGCAGTTTACAGAACTTAGGTAACCTTGTTAGAAGGTTGCTCTCTCTCTTAACAAGGGTGTTCTAATGGCTGAAAACCAGAATGCAACCCCAAAATATTACAACTGAAAGTTAAACAAGGCTAACAAGGCTAACCGAACAAAAAGGCTCATAATGACTGAGGCATGTAAGAGTCTAAGACATAGCCGATGTCCCTTATTGCACCCTCTTAATATAAGTCTTGATAAGTCCCCAAGGGGTGGCACAGTGGTTGAGACTTGGGTTTTGAGGGTATGCTCCCCTCAAGGTCCCAGGTTCGAGACTCAACTATAACATTATTCCTTCGATGTCTTTCGGTGCCTGGCCTAGAGACGGGCGTGGTTATCCTTGTTTCAAAAAAAAAAAATATAAGTCTTGATAATCAGGGGGCTTACAGCTGCTGAAACTGCAGCCATTGGAATCACTTATGAAAATCTTTTGTCTATTTTTTTTTTTTATAGATTCATTTTGTCCAATATTGTCCTAGCGTTTGGCCTTCCACTATCTGTTCTGAAAGGCCCATCTAGGGTCTCAAAGAACATTAAGGCTTTTCTACATTTTTGGAATGGAAAATTTGTCTAAATTTTTTTCTAAGTGACAATATTAATATGTTTTGAAATCTAGTTTTATAAGCATATATTATGTACTTCACTCAATTAGGCTTCTGTTTTTTGCGCCTTACGTCTTCGAGCATTTTGCTTACTTTATAAACTATTTATATTGCATTTATACACACCATTTTAGATGTCTCCTATTTTTCTCATACTTTTTTAATTGGTTACTATAAATGGGAGAGAATAATTGAACAAGAAAGACATATATTTACATGCATAGCTCAACAATAATTGACATGTACCTTCCTAAGAGGTTCAAATATGTTCAAACATTTATTTAATATAAGAGGTAAAAAAATAATGGATAGAGGAAAAAACAGGAAAAGGAATGCAATTCTCCTCTGAGATCGGTAAATAATTGTGCGAGTTGGGCCAATCGACTTTGGCTCTAGAGATTATGAATATTGTTTTAAAATAAAACAGAAAGAGAACGGAAGCTTAAACCTTGAGGTCTTTGAGACAATTGTTAATGCTTTATTGAGGCTATGGTGTGTGCAGGTCATTTTTTGTTCTTAAATCTTGTTTCGAGTTTAAATCTAACTCTGATATCACTTTTCCCCTCTTCGACTGCATCAGGATACACATGTGAGGATAAACACAGGGAACGCCTGCATTTGTGGCAAGTGTTTTTCAGCAGTCCATATGAATGGTGGGATAACAGGAACAGAAAGCCAAATCCAAAACATCCCGACTTTAAACACAAGAGTACAGGTGAGGCCCTGTGGCTGCAGGCGACGGATCCTCCATGGATTCGAAAACAGCTTGAATTGCTCGACACAAAGATGAAACAACAATATCAAGATGATCATTTTGCTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGAAGTAGCCTTCTTTCAGCCGCTGTATCACGTGCTATCCTCATTTCTTGTTCTGCTAGAACAATATGGCAATGAGTCTAAACTCTAAAGTCTGTTTCCAGCGTTCGATCGTCGAAGAAGGAAATTCGAAACATAGTTTTGTTGGCAGATATTTAGTTTGTATATATGTAATGTTCGAGAAGGCTTGAACGAAGCAAATAGATCATTTGTGGATGGAATTATACTCTCTATGGAAACATTTAGAGCTTGCTTGGTAACGTTCCCG

mRNA sequence

AAAAAAACGAATCCTAAAACCCTAAACCAGTTTTGGGACACGTCACAAATAATGCCGCCAAGTACTACTTCGAAGCTACCGGGAAACTCCGCCGAGAAAACTAGACTGTACTGATCGCCGTCAAGATCACCGTCGCCGGAGCTCCTCACCACCGCCGATTACTATGAGGGCCGCCGTTCGCCTTCTCGTCCCTATTAGACAAGTAGCTGCATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTCCTTAGCAGTAAGCACCGACGCGAAGACCTTTGTCGCCACTGGTGCCGGTAACGGAGGTTCGGTACACAGGAATCGCCCGAAATTTAAGTGGAACTCGGCCAATTTCTTTGGTACAGTCGAACAGCCCCTTAAGGTGCTTACTAGGAGTGGCAACACAGTTTATGCTTGGACATTTCTTCGGGCTAAAGTCTCCCCGGATTCTGATAGCAGTTCTAGGATTTTACTGAAACTGTGGGAAGAAATGGCTGAATCACACCTTGAGCGTCTCAAACCAAATGACTATATTTATGTTGCTGGTACTTTAGAATCTTATAAGAAGGCTGATAAGTGCGGGAAGTCCTATTTATCTTACGAGTTAACTGTGTCAGAGTTGAATTACATAGTACAAAATGCTCCGGGCTCAAAAAGTCAAAATTATGTAGGCATGCTACATGAAGAAGGATACACATGTGAGGATAAACACAGGGAACGCCTGCATTTGTGGCAAGTGTTTTTCAGCAGTCCATATGAATGGTGGGATAACAGGAACAGAAAGCCAAATCCAAAACATCCCGACTTTAAACACAAGAGTACAGGTGAGGCCCTGTGGCTGCAGGCGACGGATCCTCCATGGATTCGAAAACAGCTTGAATTGCTCGACACAAAGATGAAACAACAATATCAAGATGATCATTTTGCTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGAAGTAGCCTTCTTTCAGCCGCTGTATCACGTGCTATCCTCATTTCTTGTTCTGCTAGAACAATATGGCAATGAGTCTAAACTCTAAAGTCTGTTTCCAGCGTTCGATCGTCGAAGAAGGAAATTCGAAACATAGTTTTGTTGGCAGATATTTAGTTTGTATATATGTAATGTTCGAGAAGGCTTGAACGAAGCAAATAGATCATTTGTGGATGGAATTATACTCTCTATGGAAACATTTAGAGCTTGCTTGGTAACGTTCCCG

Coding sequence (CDS)

ATGAGGGCCGCCGTTCGCCTTCTCGTCCCTATTAGACAAGTAGCTGCATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTCCTTAGCAGTAAGCACCGACGCGAAGACCTTTGTCGCCACTGGTGCCGGTAACGGAGGTTCGGTACACAGGAATCGCCCGAAATTTAAGTGGAACTCGGCCAATTTCTTTGGTACAGTCGAACAGCCCCTTAAGGTGCTTACTAGGAGTGGCAACACAGTTTATGCTTGGACATTTCTTCGGGCTAAAGTCTCCCCGGATTCTGATAGCAGTTCTAGGATTTTACTGAAACTGTGGGAAGAAATGGCTGAATCACACCTTGAGCGTCTCAAACCAAATGACTATATTTATGTTGCTGGTACTTTAGAATCTTATAAGAAGGCTGATAAGTGCGGGAAGTCCTATTTATCTTACGAGTTAACTGTGTCAGAGTTGAATTACATAGTACAAAATGCTCCGGGCTCAAAAAGTCAAAATTATGTAGGCATGCTACATGAAGAAGGATACACATGTGAGGATAAACACAGGGAACGCCTGCATTTGTGGCAAGTGTTTTTCAGCAGTCCATATGAATGGTGGGATAACAGGAACAGAAAGCCAAATCCAAAACATCCCGACTTTAAACACAAGAGTACAGGTGAGGCCCTGTGGCTGCAGGCGACGGATCCTCCATGGATTCGAAAACAGCTTGAATTGCTCGACACAAAGATGAAACAACAATATCAAGATGATCATTTTGCTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGA

Protein sequence

MRAAVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANFFGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYIYVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEEGYTCEDKHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTKMKQQYQDDHFASDSSMSKWLCS

Homology

[Close]

BLAST of Sed0005298 vs. NCBI nr
Match: KAG7020550.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.4 bits (1108), Expect = 5.6e-117
Identity = 211/265 (79.62%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           A R L+P+RQV  SPLPPVAFFSS  +VST +   VAT A  GG VHRNR KFKWNSA F
Sbjct: 5   AFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVSPDS+SSSRILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ +GM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNP HPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSSMSKWLCS
Sbjct: 245 DTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Sed0005298 vs. NCBI nr
Match: XP_022951824.1 (protein OSB1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 431.0 bits (1107), Expect = 7.3e-117
Identity = 211/265 (79.62%), Postives = 234/265 (88.30%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           A R L+ +RQV  SPLPPVAFFSS  +VST +   VAT A +GGSVHRNR KFKWNSA F
Sbjct: 5   AFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWNSAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVSPDS+SSSRILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ +GM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNP HPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSSMSKWLCS
Sbjct: 245 DTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Sed0005298 vs. NCBI nr
Match: XP_023536822.1 (protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 5.2e-115
Identity = 210/265 (79.25%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           A RLL+P RQV  SPLP VAFFSS  +VST +   VAT A +GG V RNR KFKWNSA F
Sbjct: 5   AFRLLLPHRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVRRNRLKFKWNSAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVSPDS+ SSRILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNRSSRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ VGM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNP HPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSSMSKWLCS
Sbjct: 245 DTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Sed0005298 vs. NCBI nr
Match: XP_023002011.1 (protein OSB1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 422.5 bits (1085), Expect = 2.6e-114
Identity = 208/265 (78.49%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL+P+RQV  SPLP VAFFSS  +VST +   VAT A +GG VHRN  KFKWN+A F
Sbjct: 5   AVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWNAAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVS DS SS RILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ VGM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNPKHPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSS++KWLCS
Sbjct: 245 DTKMGKKDEDDHFGSDSSIAKWLCS 269

[Close]

BLAST of Sed0005298 vs. NCBI nr
Match: XP_038886148.1 (protein OSB1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 7.8e-111
Identity = 203/262 (77.48%), Postives = 223/262 (85.11%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL PIR+VAASP PPVA FSSS  + T +   VAT A  GGSVHR +PKFKWNSANF
Sbjct: 3   AVRLLFPIRRVAASPSPPVALFSSSSQLITKSTNCVATEAKKGGSVHRKQPKFKWNSANF 62

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
           FGTVE+PL+V+TR+G TV A T LRAKVSPDS+ S RILLKLWEEMAES +ERLKPND++
Sbjct: 63  FGTVEEPLRVVTRNGRTVIARTILRAKVSPDSNCSFRILLKLWEEMAESCIERLKPNDFV 122

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEEGYTCEDKHR 183
           YVAGTLESYKK ++CGKSYLSYELTVSELN I QN  GSKSQN VGMLHEEGY     +R
Sbjct: 123 YVAGTLESYKKTNQCGKSYLSYELTVSELNCIAQNDQGSKSQNSVGMLHEEGYARRCNYR 182

Query: 184 ERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTK 243
           ERLHLWQVFFSSP+EWWDNRN+K NPKHPDFKHKSTGE LWL+ATDPPWIRKQLELLDTK
Sbjct: 183 ERLHLWQVFFSSPHEWWDNRNQKSNPKHPDFKHKSTGEVLWLEATDPPWIRKQLELLDTK 242

Query: 244 MKQQYQDDHFASDSSMSKWLCS 266
           M++  QD HF SDSSMSKWL S
Sbjct: 243 MEENDQDGHFGSDSSMSKWLYS 264

[Close]

BLAST of Sed0005298 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.3e-35
Identity = 82/210 (39.05%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 59  NSANFFGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLK 118
           NS +  G V++ ++V+    +    +T LR K   + + S RI L++W+ MA + +  LK
Sbjct: 56  NSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLK 115

Query: 119 PNDYIYVAGTLESYKK--ADKCGKSYLSYELTVSELNYIVQNAPGS---KSQNYVGMLHE 178
            ND+I V+G LESY K  +D      L Y++ V+E+NY+   AP S    SQ       +
Sbjct: 116 LNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVA--APPSHVLDSQISKNPKTK 175

Query: 179 EGYTCEDKHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWI 238
                E+  ++ ++LWQVFFS+PY+WWDNR  K NPK PDFKHK TGEALWL +  P WI
Sbjct: 176 TEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDLPDWI 235

Query: 239 RKQLELLDTKMKQQYQDDHFASDSSMSKWL 264
            ++LEL D   K ++ D+       +S ++
Sbjct: 236 TRRLELFD--QKNRFYDEEKTRRDRLSDYI 261

[Close]

BLAST of Sed0005298 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 181 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQL 238
           K  +R  +W+    +P +WWDNR  K NPK PDFKHK TGEALW+    P W   +L
Sbjct: 372 KQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTWALSKL 427

[Close]

BLAST of Sed0005298 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 189 WQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTKMK 246
           W+    +P +WWDNR  K N K PDFKHK TGEALWL  + P W+  +L  +  K +
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

[Close]

BLAST of Sed0005298 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 25/60 (41.67%), Postives = 33/60 (55.00%), Query Frame = 0


Query: 189 WQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTKMKQQY 248
           W+    +  +WWDNR  K  PK PDFKHK TG  LWL +  P W+ ++L    +K    Y
Sbjct: 296 WKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWL-SDSPSWVLEKLPPPKSKTSDIY 354

[Close]

BLAST of Sed0005298 vs. ExPASy TrEMBL
Match: A0A6J1GJW3 (protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.5e-117
Identity = 211/265 (79.62%), Postives = 234/265 (88.30%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           A R L+ +RQV  SPLPPVAFFSS  +VST +   VAT A +GGSVHRNR KFKWNSA F
Sbjct: 5   AFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWNSAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVSPDS+SSSRILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ +GM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNP HPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSSMSKWLCS
Sbjct: 245 DTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Sed0005298 vs. ExPASy TrEMBL
Match: A0A6J1KK72 (protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 208/265 (78.49%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL+P+RQV  SPLP VAFFSS  +VST +   VAT A +GG VHRN  KFKWN+A F
Sbjct: 5   AVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWNAAKF 64

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPLKV TR+G+TVYAWTFLRAKVS DS SS RILLKLWEEMAES++ERLKPND+I
Sbjct: 65  VGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKPNDFI 124

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEE---GYTCED 183
           YVAGTLESYKKADKCGKS+LSYELTVSELN+I QNA GSKSQ+ VGM+HEE   GY C+D
Sbjct: 125 YVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYACKD 184

Query: 184 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELL 243
           K RERLHLWQVFFSSP+EWWDNRN+KPNPKHPDFKHKSTGE LWL+ATDPPWI KQLELL
Sbjct: 185 KCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQLELL 244

Query: 244 DTKMKQQYQDDHFASDSSMSKWLCS 266
           DTKM ++ +DDHF SDSS++KWLCS
Sbjct: 245 DTKMGKKDEDDHFGSDSSIAKWLCS 269

[Close]

BLAST of Sed0005298 vs. ExPASy TrEMBL
Match: A0A6J1CSS2 (protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.5e-104
Identity = 195/262 (74.43%), Postives = 215/262 (82.06%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL P+RQVAASPLPPVAFFS ++ + T +    AT A     V RNRPKFKWNSA+F
Sbjct: 3   AVRLLYPLRQVAASPLPPVAFFSGAV-IDTKSTNCAATDANTESPVRRNRPKFKWNSASF 62

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
            GTVEQPL+V TR+G T+ AWTFLRAKVSPDS+SS R+ LKLWEEMAES+LERLKPND+I
Sbjct: 63  VGTVEQPLRVNTRNGKTLSAWTFLRAKVSPDSNSSFRVFLKLWEEMAESNLERLKPNDFI 122

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEEGYTCEDKHR 183
           YVAGTLESYKK +KCGKSYL YELTVSELNYI Q   GSKSQN  G+ HEEG     K+R
Sbjct: 123 YVAGTLESYKKDNKCGKSYLCYELTVSELNYIKQYDQGSKSQNDEGVRHEEG-DPRKKYR 182

Query: 184 ERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTK 243
           ERLHLWQVFF SPYEWWDNRN K N KHPDF+HKSTGEALWLQATDPPWIRKQLE LD K
Sbjct: 183 ERLHLWQVFFGSPYEWWDNRNHKSNSKHPDFRHKSTGEALWLQATDPPWIRKQLEFLDGK 242

Query: 244 MKQQYQDDHFASDSSMSKWLCS 266
           M+++ Q  HF SDSSMSKWL S
Sbjct: 243 MEEKDQHCHFGSDSSMSKWLYS 262

[Close]

BLAST of Sed0005298 vs. ExPASy TrEMBL
Match: A0A0A0LNI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.5e-95
Identity = 179/259 (69.11%), Postives = 202/259 (77.99%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL  +R V   P P VA FSSS ++ T +   VAT A   GSV+ ++PKFKW SANF
Sbjct: 3   AVRLLFSLRPVTTLPSPSVALFSSSSSLITKSMNSVATEAKKQGSVYEHQPKFKWKSANF 62

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
           FGTVE+PLKV TR+  TV AWT LRAK SPDS SS RI LKL +EMAES +ERLKPNDY+
Sbjct: 63  FGTVERPLKVTTRNCRTVRAWTILRAKASPDSSSSFRIFLKLEKEMAESWIERLKPNDYV 122

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEEGYTCEDKHR 183
            VAG LESYKK  K GKSYLSY+LTVSELN I  N  GSKSQN VGMLHEEG+ C   +R
Sbjct: 123 NVAGPLESYKKVGKSGKSYLSYQLTVSELNCIAHNDQGSKSQNSVGMLHEEGHDCRSSYR 182

Query: 184 ERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTK 243
           ERL+LWQVFFSSP+EWWDNRN+K NP  PDF HKSTGEALWL++TDPPWIRKQLELLDT+
Sbjct: 183 ERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTGEALWLRSTDPPWIRKQLELLDTQ 242

Query: 244 MKQQYQDDHFASDSSMSKW 263
           MK++  D H  SDSSMS W
Sbjct: 243 MKKKDGDGHLVSDSSMSNW 261

[Close]

BLAST of Sed0005298 vs. ExPASy TrEMBL
Match: A0A5A7VHQ1 (Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.0e-92
Identity = 175/260 (67.31%), Postives = 203/260 (78.08%), Query Frame = 0


Query: 4   AVRLLVPIRQVAASPLPPVAFFSSSLAVSTDAKTFVATGAGNGGSVHRNRPKFKWNSANF 63
           AVRLL  +R V  SP P VA FSSS +++T +   VAT A   GSV++N+PKF W SANF
Sbjct: 3   AVRLLFSLRPVTTSPSPSVALFSSSSSLTTKSMNSVATEAKKQGSVYKNQPKFTWKSANF 62

Query: 64  FGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLKPNDYI 123
           +GTVE+PLKV+T +  TV AWT LRAKVSPDS+SS RI L+L +EMAES +ERLKPNDYI
Sbjct: 63  YGTVERPLKVITWNCRTVMAWTILRAKVSPDSNSSFRIFLRLQKEMAESWIERLKPNDYI 122

Query: 124 YVAGTLESYKKADKCGKSYLSYELTVSELNYIVQNAPGSKSQNYVGMLHEEGYTCEDKHR 183
           YVAGTLESYK A K G S LSY LTVSELN I +N  GSKSQN VGMLHEEG  C   + 
Sbjct: 123 YVAGTLESYKNAAKSGTSSLSYRLTVSELNCITRNDQGSKSQNSVGMLHEEGRDCRSSYV 182

Query: 184 ERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTK 243
           ERL+LWQVFFSSP+EWWDNRN+K NP  PDF HKST EALWL+ TDPPWI+KQL+LLDTK
Sbjct: 183 ERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFTHKSTNEALWLRPTDPPWIKKQLKLLDTK 242

Query: 244 MKQQYQDDHFASDSSMSKWL 264
           M+++  D H  SDSSMS W+
Sbjct: 243 MRKKDHDGHLVSDSSMSSWI 262

[Close]

BLAST of Sed0005298 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-36
Identity = 82/210 (39.05%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 59  NSANFFGTVEQPLKVLTRSGNTVYAWTFLRAKVSPDSDSSSRILLKLWEEMAESHLERLK 118
           NS +  G V++ ++V+    +    +T LR K   + + S RI L++W+ MA + +  LK
Sbjct: 56  NSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLK 115

Query: 119 PNDYIYVAGTLESYKK--ADKCGKSYLSYELTVSELNYIVQNAPGS---KSQNYVGMLHE 178
            ND+I V+G LESY K  +D      L Y++ V+E+NY+   AP S    SQ       +
Sbjct: 116 LNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVA--APPSHVLDSQISKNPKTK 175

Query: 179 EGYTCEDKHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWI 238
                E+  ++ ++LWQVFFS+PY+WWDNR  K NPK PDFKHK TGEALWL +  P WI
Sbjct: 176 TEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDLPDWI 235

Query: 239 RKQLELLDTKMKQQYQDDHFASDSSMSKWL 264
            ++LEL D   K ++ D+       +S ++
Sbjct: 236 TRRLELFD--QKNRFYDEEKTRRDRLSDYI 261

[Close]

BLAST of Sed0005298 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 181 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQL 238
           K  +R  +W+    +P +WWDNR  K NPK PDFKHK TGEALW+    P W   +L
Sbjct: 374 KQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTWALSKL 429

[Close]

BLAST of Sed0005298 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 181 KHRERLHLWQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQL 238
           K  +R  +W+    +P +WWDNR  K NPK PDFKHK TGEALW+    P W   +L
Sbjct: 372 KQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTWALSKL 427

[Close]

BLAST of Sed0005298 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 189 WQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTKMK 246
           W+    +P +WWDNR  K N K PDFKHK TGEALWL  + P W+  +L  +  K +
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

[Close]

BLAST of Sed0005298 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 189 WQVFFSSPYEWWDNRNRKPNPKHPDFKHKSTGEALWLQATDPPWIRKQLELLDTKMK 246
           W+    +P +WWDNR  K N K PDFKHK TGEALWL  + P W+  +L  +  K +
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

The following BLAST results are available for this feature:

BLAST of Sed0005298 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020550.1	5.6e-117	79.62	Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951824.1	7.3e-117	79.62	protein OSB1, mitochondrial-like [Cucurbita moschata]	[more]
XP_023536822.1	5.2e-115	79.25	protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002011.1	2.6e-114	78.49	protein OSB1, mitochondrial-like [Cucurbita maxima]	[more]
XP_038886148.1	7.8e-111	77.48	protein OSB1, mitochondrial-like [Benincasa hispida]	[more]

BLAST of Sed0005298 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	4.3e-35	39.05	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GWJ4	1.8e-09	49.12	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8GXH3	2.6e-08	47.37	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	1.4e-06	41.67	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]

BLAST of Sed0005298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW3	3.5e-117	79.62	protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 P...	[more]
A0A6J1KK72	1.3e-114	78.49	protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=...	[more]
A0A6J1CSS2	4.5e-104	74.43	protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 ...	[more]
A0A0A0LNI3	6.5e-95	69.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1	[more]
A0A5A7VHQ1	1.0e-92	67.31	Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 P...	[more]

BLAST of Sed0005298 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	3.0e-36	39.05	Primosome PriB/single-strand DNA-binding	[more]
AT5G44785.2	1.3e-10	49.12	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	1.3e-10	49.12	organellar single-stranded DNA binding protein 3	[more]
AT4G20010.1	1.9e-09	47.37	plastid transcriptionally active 9	[more]
AT4G20010.2	1.9e-09	47.37	plastid transcriptionally active 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 70..153 e-value: 1.2E-4 score: 22.1
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 58..156 score: 10.111899
None	No IPR available	GENE3D	2.40.50.140		coord: 52..155 e-value: 4.7E-6 score: 28.3
None	No IPR available	PANTHER	PTHR10302:SF18	PROTEIN OSB1, MITOCHONDRIAL	coord: 4..262
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 4..262
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 59..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005298.1	Sed0005298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding