Sed0005287 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGATCTTCTTCTCAGCGATTTGAATCCGAATCTGGAAATGGTGCAAGAAGAATCTACGGCAAGCGCTTCAGAACCTGAGCTCGAGACGGTCGAATCGAAACCGCTCGAAATCGGAAGTGATGCGGATTGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAGGCGCTTCTAATGGCGAGTCTCGTCGTCGACGACACGCCGGATCGAGAGTTCCGCCACAAGAAACGGTCTGTTCTGCAGTGCAGGAGTCCTCCGTCTGGATCCAGGAGGTACACATTTCTCGATTCTGAATCTGGTTCTGATTTGAATCTGATTTTGATTCTGATTCGTCCCTTTGTGATTCGACGAGAAGAATGAAGACCTAGGGTTTTATTTCAATTGGAATTGATTCGTTTGAAATTGGAGTTCATTTCTTAGATTTTTTTTTTTTCTGTCTGTAGGAAACGGAGGACTTCGTCAAGTTTGATTTCGATTCCGGTGGCTGTTCTTGATCTCGAAGAAGAAGAATCGACTGTCAAAGGTATGGATTTCCATGTCCGATGCTCTGAGTTGAGGATTTGGGGATTTGCATTAAGCCCTAATTCTGTTCTGTTCCTTGTTTGGCTGCTGAGAAAATTCTATCAACAAATTTTATTTGAAGTTCTTACAATTATTCTCCCTCTGGCCTAGAGACGGGCATGGTTACCCATGTTTCAAAAAAAAAAAAAAATTACAGTTAAATTTTACGAATTAAAACACTTATTAGATAGGCTAATTATATATTTTAAGCATTATGTGATAGATTGATTTGGGACTGTTTCAAGCTCTTGATGCTTTTTTTTTTCTTGAAAATAAATTAATAAACACTACTTTCACTTATCTACTTAGAACAAGTTTTCGAATTCACGCCTAGTTTTGGCAACTATTTGGGCTTGATAACTATTTCGTTTTTTATTTTTTATTTTTGTTTTTACTATTTTGAAAATAGATTCGTTTGATAACAAAATTTGTTTTTTGTTTTAAATTTTTTTAAAGCGTTTTAAAAATACTAAAGAAATTTTCATAACTAAAAAAAATAGCTTTTCAAAACATGTTTTTTGTTTTTAAAAAAGTATGAAAAAATCAAGAATAAATAGTAAAAAAATCAAAATATAATGTAATGTCTTAAAAAAAAATAGTAATAAAACATGTTTTTTGGTTTTAATTTTCAAAAACATAAAACTAAAATCATTTATCAAATACATACAATTTTTATTTTTCAAAACAGAAAACCAAAAACTAAAATTGAAGAACTAGAAACAAAAAATAAAAAATGAAATGATTTTCAAACGAGACTTTGGTTTTGAGTTTTAAAAATCAAGCTGCTTTTCTCCTAAATTCTTTACAATAGTTTTCATCACAATAAGGGACCATTTGAATTCTTAGCCAATATAAAAAGTCTATAACAAAACAATAACATCCATAGGTAGAAGTAATATTTATAAGTTTAATAATTGAAAACCAAATTGTTTCTATAAACTTGTTATTGTTTTGGGAATTTGACTGGTTTTTGTTGTTGATTTTTTGTTTTAAAAAATTAAGGCTGTAAGTACTACTTTCTAATGTGATTTTCTTTGTTTCAATATTTTTTTTTTTGAAACAAAGGTAATCACTCTAGTCCCTAGGCCAGGCACCGAGAAACATCAAAAGAGTAATGTCACAGCTGAGTCTCAAACCTGAGACTTTGAGGAGAGCATATCCTTAAAGCTCAAGTCTTCAATCAGTGTGACACCCCTTGGGAACTACTTTGTTTCAATATCAAAAAATCGTAAAGAAAACAATTACAATATTCAAGAATAGAAATTAAATACGAAATCGTTATCCAAGGGTCTTTAAAGAGGGCTTATTAAATATTTTTGAGGTTTGAAGAAGACTCAGATTTCAAACTTTAACCATAATTTGATAGAGAAAATAATTCTTGTCCCTGATAATATGTGAACAGATAAGGCTCCAAAACAAGAAGAAAAAGCAGAGGCTGAACCAAAGAAAAGTTACCCATTGGTTGAACAGAAAGCTGGTTCTTCTTCTTCATCATCATCACCATGTTCAACTCTCCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATCATCTCTCTCAACTTTTAAGTTTGAGCTTTTTGGATACTTGATCTTGTTCTTAATTGTTTTGTTTTTAATTCTTCTTCACAACAGATTTGCTTGGAAATTTGCTTTGAACCTAGTACCACACCTTGTGGACATAGGTAAGCTAAAAACTGACTCATCTTTATTACACTCTAATCCTATTATATGGACCTTTGAATTGTAGCCTAGATTTTGAGATGTTCTGCTTTGATTACTAAAATGTATATTAAAGTCATCTCGGTTGTTTTTGCTTTATTTTTTTTATTTGAGTTTTCATTAATTATTGTTTAGAAATATTGAAGTGAATTTTAGGTTAAATTAAAGTTGAAAGTCCCTGTGCATTTAGGTAAGTTTGGATTTCTAGGTCTCTAAACTTTTCATCCACGTAATATAAAAATGCCTATGATAGGTCATGGACCTTGTTGAGATATGTCTTGAACGCACCAATGCTCTGTGATTAGTAGTCGGGGGTCTCGCTGCCTGGTTAGCGAGTGGGGGTGCGGGGGCAACACCCCGATTGCGCAAATGCTTTTCGCATTGCATACCATTGTTTCGTGCATAGCAGCAAGCATGCATTTAGCACAGCCAGCATTTTGCACCCCATAGTGCTAGCACTTCCGCATTATGTTGTGCATTCCGTGTATGCTAGCGCATCCGCATTCTGTTTAATGCTTACGCATTCTATAATAGGGTTTAATGAGAGTGTCTATATAAACTTGAATTAAACTCAACTCTAAACGTATTATACATTCATTTTGAAATCTGTATTGTTCGCCTCTCCTTAATAAATAAGGCCCTCACTCTGCCCGTGGACTAGCTAACACTACGTTATAGTGAACTACGTAAATTTCTATGTGTTTGTTCTTCTTCTCTCACGTTTTTTTATTCTTTGATCGATTGTTGATTGTCGTTTTCATAACAGACCTTATGACATTGTTAAGTTCGAAGACCTAATAGTCACAAAATAGAAAGCTTAGGTTCCCGTAAAACCAACGACTCAACTTTATATCTTAATGATTATTAGTCATAAAATTGAAAGTTACAAGAGACGTGTTAAATTTAAATATGAAAAGAATAGGACAAATAAAACCATCATGGAGTGGCAAAAGTAAAGATGGTCTTGTCGGGTGAAGGTGATAGGCTCAATCTATAAGTGGTCACCTACCTAGGAATTAATTTCTTATGGGCCACCATATCTAGGAATTAATTTCCTATGAGTTTCTTTGACATCCAAATATTGTAGGATCGGGTGGTATGTTCAATAACTTAAGTTGAGGTGAGTGCGTAAGCTGGTCCAGACAATCACAAATAAAAAAAAAAAAATAGGACAGATAAAAATAAGAACAACGGTTCAGTGAGATGATTTAACCTAGGATTGGGATAACTTATATTTTCCATTACACTTTAAATCATAGTCAACAATTTGGAGAACTTGATGCTGAACTTTTATCGATTCTCTCAAGTTGTCATTTGTACCATTCTAAGTTTCTTCTTATCTGCTTGTTGTATTAGTTTCTGCAAGAAATGCTTAAGATCTGCAGCTGAAAAATGTGGAAAAAAGTGCCCCAAATGCAGACAGCTAATAAGGTTGAATTTGCTACTCCAAAGTGTCATAAAACCAAATCATTATCATTTCATTTTCAGACCTTAATTCTTAATATCTCTCTATTGTATTGATCTTACATTTGCAGCAATGGGAGATCTTGCACTATAAATACAGTTCTTTGGAATACAATACAACTTCTCTTTCCCAAGGAGGTTGAGACAAGAAAGGAAGCAAAAGAGGGTAGTAGCCATCAAAAGAAGAAGAATCAAGACCCAGAAAAGGCCAACACACGACCGACAGGCACGTCGAGTCGACATGGCAGTAGTAGTAGTTCAAGAAGAAGAGGGGAAATAACCGTTCGAGATGAGGACGGTGAATCGATCAGCAGGATGACGCGGCGAGCTGCACTTTCGAATGACGAAAGCAGAGTCACCAGAACCCACCATCGAAGCATTCGACCGGTGAGGACGATAACTCGAGATGCAGATGTGAGAAGCAGTAGTAGAAGAGGTACACCAGACCAAGATCAGGATGCTGCATTGGCACTGAGGTTACAGAGGGAAGAGTTTATGGAGGCTTTCAGAGACACTCCAGTGCAAACCAGAAGCTCACTGTCCTTGGCTAGAGCTAACCTTAGAGCAATGGCTAGGGCTGCTGTTAATCTACGCGTTAATCGTCACTCGGATTTGTAGTTCATACTTTTCATAT GATGATCTTCTTCTCAGCGATTTGAATCCGAATCTGGAAATGGTGCAAGAAGAATCTACGGCAAGCGCTTCAGAACCTGAGCTCGAGACGGTCGAATCGAAACCGCTCGAAATCGGAAGTGATGCGGATTGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAGGCGCTTCTAATGGCGAGTCTCGTCGTCGACGACACGCCGGATCGAGAGTTCCGCCACAAGAAACGGTCTGTTCTGCAGTGCAGGAGTCCTCCGTCTGGATCCAGGAGGAAACGGAGGACTTCGTCAAGTTTGATTTCGATTCCGGTGGCTGTTCTTGATCTCGAAGAAGAAGAATCGACTGTCAAAGATAAGGCTCCAAAACAAGAAGAAAAAGCAGAGGCTGAACCAAAGAAAAGTTACCCATTGGTTGAACAGAAAGCTGGTTCTTCTTCTTCATCATCATCACCATGTTCAACTCTCCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGCTTGGAAATTTGCTTTGAACCTAGTACCACACCTTGTGGACATAGTTTCTGCAAGAAATGCTTAAGATCTGCAGCTGAAAAATGTGGAAAAAAGTGCCCCAAATGCAGACAGCTAATAAGCAATGGGAGATCTTGCACTATAAATACAGTTCTTTGGAATACAATACAACTTCTCTTTCCCAAGGAGGTTGAGACAAGAAAGGAAGCAAAAGAGGGTAGTAGCCATCAAAAGAAGAAGAATCAAGACCCAGAAAAGGCCAACACACGACCGACAGGCACGTCGAGTCGACATGGCAGTAGTAGTAGTTCAAGAAGAAGAGGGGAAATAACCGTTCGAGATGAGGACGGTGAATCGATCAGCAGGATGACGCGGCGAGCTGCACTTTCGAATGACGAAAGCAGAGTCACCAGAACCCACCATCGAAGCATTCGACCGGTGAGGACGATAACTCGAGATGCAGATGTGAGAAGCAGTAGTAGAAGAGGTACACCAGACCAAGATCAGGATGCTGCATTGGCACTGAGGTTACAGAGGGAAGAGTTTATGGAGGCTTTCAGAGACACTCCAGTGCAAACCAGAAGCTCACTGTCCTTGGCTAGAGCTAACCTTAGAGCAATGGCTAGGGCTGCTGTTAATCTACGCGTTAATCGTCACTCGGATTTGTAGTTCATACTTTTCATAT ATGGTGCAAGAAGAATCTACGGCAAGCGCTTCAGAACCTGAGCTCGAGACGGTCGAATCGAAACCGCTCGAAATCGGAAGTGATGCGGATTGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAGGCGCTTCTAATGGCGAGTCTCGTCGTCGACGACACGCCGGATCGAGAGTTCCGCCACAAGAAACGGTCTGTTCTGCAGTGCAGGAGTCCTCCGTCTGGATCCAGGAGGAAACGGAGGACTTCGTCAAGTTTGATTTCGATTCCGGTGGCTGTTCTTGATCTCGAAGAAGAAGAATCGACTGTCAAAGATAAGGCTCCAAAACAAGAAGAAAAAGCAGAGGCTGAACCAAAGAAAAGTTACCCATTGGTTGAACAGAAAGCTGGTTCTTCTTCTTCATCATCATCACCATGTTCAACTCTCCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGCTTGGAAATTTGCTTTGAACCTAGTACCACACCTTGTGGACATAGTTTCTGCAAGAAATGCTTAAGATCTGCAGCTGAAAAATGTGGAAAAAAGTGCCCCAAATGCAGACAGCTAATAAGCAATGGGAGATCTTGCACTATAAATACAGTTCTTTGGAATACAATACAACTTCTCTTTCCCAAGGAGGTTGAGACAAGAAAGGAAGCAAAAGAGGGTAGTAGCCATCAAAAGAAGAAGAATCAAGACCCAGAAAAGGCCAACACACGACCGACAGGCACGTCGAGTCGACATGGCAGTAGTAGTAGTTCAAGAAGAAGAGGGGAAATAACCGTTCGAGATGAGGACGGTGAATCGATCAGCAGGATGACGCGGCGAGCTGCACTTTCGAATGACGAAAGCAGAGTCACCAGAACCCACCATCGAAGCATTCGACCGGTGAGGACGATAACTCGAGATGCAGATGTGAGAAGCAGTAGTAGAAGAGGTACACCAGACCAAGATCAGGATGCTGCATTGGCACTGAGGTTACAGAGGGAAGAGTTTATGGAGGCTTTCAGAGACACTCCAGTGCAAACCAGAAGCTCACTGTCCTTGGCTAGAGCTAACCTTAGAGCAATGGCTAGGGCTGCTGTTAATCTACGCGTTAATCGTCACTCGGATTTGTAG MVQEESTASASEPELETVESKPLEIGSDADCFLSPRFKSAAAMAGWDEEALLMASLVVDDTPDREFRHKKRSVLQCRSPPSGSRRKRRTSSSLISIPVAVLDLEEEESTVKDKAPKQEEKAEAEPKKSYPLVEQKAGSSSSSSSPCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAEKCGKKCPKCRQLISNGRSCTINTVLWNTIQLLFPKEVETRKEAKEGSSHQKKKNQDPEKANTRPTGTSSRHGSSSSSRRRGEITVRDEDGESISRMTRRAALSNDESRVTRTHHRSIRPVRTITRDADVRSSSRRGTPDQDQDAALALRLQREEFMEAFRDTPVQTRSSLSLARANLRAMARAAVNLRVNRHSDL Homology
BLAST of Sed0005287 vs. NCBI nr
Match: KAG6588921.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 514.6 bits (1324), Expect = 7.3e-142 Identity = 302/388 (77.84%), Postives = 326/388 (84.02%), Query Frame = 0
BLAST of Sed0005287 vs. NCBI nr
Match: XP_022928318.1 (LON peptidase N-terminal domain and RING finger protein 3-like [Cucurbita moschata]) HSP 1 Score: 512.3 bits (1318), Expect = 3.6e-141 Identity = 299/382 (78.27%), Postives = 322/382 (84.29%), Query Frame = 0
BLAST of Sed0005287 vs. NCBI nr
Match: XP_023531716.1 (E3 ubiquitin-protein ligase RNF168-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 509.2 bits (1310), Expect = 3.1e-140 Identity = 305/393 (77.61%), Postives = 327/393 (83.21%), Query Frame = 0
BLAST of Sed0005287 vs. NCBI nr
Match: KAG7017808.1 (Tripartite motif-containing protein 65, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 506.5 bits (1303), Expect = 2.0e-139 Identity = 299/397 (75.31%), Postives = 330/397 (83.12%), Query Frame = 0
BLAST of Sed0005287 vs. NCBI nr
Match: KAG6581080.1 (Tripartite motif-containing protein 65, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 504.2 bits (1297), Expect = 9.9e-139 Identity = 298/397 (75.06%), Postives = 329/397 (82.87%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy Swiss-Prot
Match: Q0IIM1 (E3 ubiquitin-protein ligase RNF168 OS=Bos taurus OX=9913 GN=RNF168 PE=2 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07 Identity = 62/212 (29.25%), Postives = 93/212 (43.87%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy Swiss-Prot
Match: Q92021 (Nuclear factor 7, brain OS=Xenopus laevis OX=8355 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-07 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy Swiss-Prot
Match: Q8IYW5 (E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens OX=9606 GN=RNF168 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07 Identity = 55/209 (26.32%), Postives = 87/209 (41.63%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy Swiss-Prot
Match: Q6PJ69 (Tripartite motif-containing protein 65 OS=Homo sapiens OX=9606 GN=TRIM65 PE=1 SV=3) HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07 Identity = 51/189 (26.98%), Postives = 79/189 (41.80%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy Swiss-Prot
Match: Q9D4H7 (LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus OX=10090 GN=Lonrf3 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06 Identity = 43/136 (31.62%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy TrEMBL
Match: A0A6J1ENN5 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111435179 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.8e-141 Identity = 299/382 (78.27%), Postives = 322/382 (84.29%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy TrEMBL
Match: A0A6J1F9B4 (E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441989 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 6.2e-139 Identity = 301/398 (75.63%), Postives = 331/398 (83.17%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy TrEMBL
Match: A0A0A0LBY2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.7e-136 Identity = 297/397 (74.81%), Postives = 331/397 (83.38%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy TrEMBL
Match: A0A5A7URU5 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00490 PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136 Identity = 294/383 (76.76%), Postives = 320/383 (83.55%), Query Frame = 0
BLAST of Sed0005287 vs. ExPASy TrEMBL
Match: A0A1S3BPD3 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103491762 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 2.5e-135 Identity = 293/383 (76.50%), Postives = 320/383 (83.55%), Query Frame = 0
BLAST of Sed0005287 vs. TAIR 10
Match: AT3G27330.1 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 260.0 bits (663), Expect = 3.0e-69 Identity = 180/360 (50.00%), Postives = 221/360 (61.39%), Query Frame = 0
BLAST of Sed0005287 vs. TAIR 10
Match: AT1G18660.4 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Sed0005287 vs. TAIR 10
Match: AT1G18660.2 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Sed0005287 vs. TAIR 10
Match: AT1G18660.3 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Sed0005287 vs. TAIR 10
Match: AT1G18660.1 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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