Sed0005224 (gene) Chayote v1

Overview


Name	Sed0005224
Type	gene
Organism	Sechium edule (Chayote v1)
Description	(1->3)-beta-glucan endohydrolase
Location	LG09: 2366874 .. 2367674 (+)
RNA-Seq Expression	Sed0005224
Synteny	Sed0005224

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCTATCCGAGCCAAACAAAGGAATCTTGGATGCCTTCTTACAGGATATGGATGTAGGCTTCACTTATGGCATATCGAATGCGTTGTTAAAGAACATGAACGATAACTCTAAGGTTGAAAGTTTGTTTAACTCGTTCGTTAAACCATACAACAAATCTATCAATCTCGAGTATATCGTTGTGGGCGAGGATGGACATTAGAATATACTATCAACTATGAAAGTACTCCGAGGTCTTCTCAACGCAAATACTCGTAGTCAAGTGAAACTCACGACCATAGTAACCTATAATTCTTTGGACACTAAGGATCCTCCATCTGTTGGAGACTTCCATCCCTATTATTTGAGAGATCTGCTTAAAATTTTAGCAGAACAAGGCTCACCTGAACTAATGGCGAGCTTGTACCCATAATTTGTCTACGAATACTAAGGTGGTTTAATCATCGATTTTTCCATTTTTGGAGGGACAATTAATAATTCAATGTCATATGGATCGTTCATCTATCAGAATCTATTTGATTACATGGTAGACTCGATATATGTAGTCATTGACAACTTAGAAGATGAAAAATTAAAAAATGTTACAGTGGTGATTGGAGAAACTAGATGGCCAACTGGCGGACATGGATTTGATGCTGGTGTTATTGCTGCAAGTACATATAATCAGAAACTTTTAACACATATGAGTTCTGGGAAGGGAACTCCAAGAAAGCCAAATATTAACATGAAAGGGTTCATACGAAGTCTTTTCAATGAAGATAAAGAGCCTCAAAGCGAGTCTTGGAATCTTCAAAAATGA

mRNA sequence

ATGCGGCTATCCGAGCCAAACAAAGGAATCTTGGATGCCTTCTTACAGGATATGGATGTAGGCTTCACTTATGGCATATCGAATGCGTTGTTAAAGAACATGAACGATAACTCTAAGAATCTATTTGATTACATGGTAGACTCGATATATGTAGTCATTGACAACTTAGAAGATGAAAAATTAAAAAATGTTACAGTGGTGATTGGAGAAACTAGATGGCCAACTGGCGGACATGGATTTGATGCTGGTGTTATTGCTGCAAGTACATATAATCAGAAACTTTTAACACATATGAGTTCTGGGAAGGGAACTCCAAGAAAGCCAAATATTAACATGAAAGGGTTCATACGAAGTCTTTTCAATGAAGATAAAGAGCCTCAAAGCGAGTCTTGGAATCTTCAAAAATGA

Coding sequence (CDS)

ATGCGGCTATCCGAGCCAAACAAAGGAATCTTGGATGCCTTCTTACAGGATATGGATGTAGGCTTCACTTATGGCATATCGAATGCGTTGTTAAAGAACATGAACGATAACTCTAAGAATCTATTTGATTACATGGTAGACTCGATATATGTAGTCATTGACAACTTAGAAGATGAAAAATTAAAAAATGTTACAGTGGTGATTGGAGAAACTAGATGGCCAACTGGCGGACATGGATTTGATGCTGGTGTTATTGCTGCAAGTACATATAATCAGAAACTTTTAACACATATGAGTTCTGGGAAGGGAACTCCAAGAAAGCCAAATATTAACATGAAAGGGTTCATACGAAGTCTTTTCAATGAAGATAAAGAGCCTCAAAGCGAGTCTTGGAATCTTCAAAAATGA

Protein sequence

MRLSEPNKGILDAFLQDMDVGFTYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWNLQK

Homology

[Close]

BLAST of Sed0005224 vs. NCBI nr
Match: XP_038880473.1 (probable glucan endo-1,3-beta-glucosidase BG5 [Benincasa hispida])

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-19
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 14  FLQDMDVGFTYGISNALLKNMND---NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGE 73
           ++ D  +   Y I N     + D   N  NLFD MV+++Y  ID    E + +VTVV+GE
Sbjct: 204 YMFDGGISLNYAIFNETEPVVRDGELNYYNLFDAMVEAVYAAIDK---EAVGDVTVVVGE 263

Query: 74  TRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           T WPT G   DA    A  YN+K ++H+ SGKGTPRKPN+ ++GFI+S+FNED++PQ +S
Sbjct: 264 TGWPTCGSDDDATPAIAEEYNKKFVSHICSGKGTPRKPNVFLEGFIQSIFNEDEKPQGDS 320

[Close]

BLAST of Sed0005224 vs. NCBI nr
Match: TYK10034.1 (putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-17
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 28  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAA 87
           N+ ++   D + N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A
Sbjct: 176 NSSIRIDGDLTYNIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLA 235

Query: 88  STYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
            TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 236 LTYNKKFKNHITSGKGTPMKPNIYIEGFIRSLFNENEKPEGES 274

[Close]

BLAST of Sed0005224 vs. NCBI nr
Match: XP_022968751.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita maxima])

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 23  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDA 82
           T    N+L+++   +  NLFD MVD+ Y  ID    E + +V +VIGET WPT G+    
Sbjct: 213 TLSEQNSLVRDGMLSYNNLFDEMVDAFYAAIDK---ENVGDVAIVIGETGWPTCGNYNAT 272

Query: 83  GVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
             + A+ YN+   +H+SSGKGTPRK NI ++GFIRS+FNE+++P+ ES
Sbjct: 273 TPLLAAEYNRNFKSHISSGKGTPRKENIYIEGFIRSIFNENQKPEGES 317

[Close]

BLAST of Sed0005224 vs. NCBI nr
Match: XP_008451157.1 (PREDICTED: probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++
Sbjct: 106 NIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLALTYNKKFKNHIT 165

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 166 SGKGTPMKPNIYIEGFIRSLFNENEKPEGES 192

[Close]

BLAST of Sed0005224 vs. NCBI nr
Match: KAA0055783.1 (putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++
Sbjct: 220 NIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLALTYNKKFKNHIT 279

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 280 SGKGTPMKPNIYIEGFIRSLFNENEKPEGES 306

[Close]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot
Match: O49352 (Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN=BG4 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.7e-14
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +KN+ +V+ ET WP+ G+G       ASTYN+  + H++
Sbjct: 240 NMFDAIFDAF---VWAMEKEGVKNLPMVVSETGWPSAGNGNFTTPAIASTYNRNFVKHIA 299

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN 133
           SGKGTP++PN +M GF+ + FNE+++P     N
Sbjct: 300 SGKGTPKRPNKSMNGFLFATFNENQKPAGTEQN 329

[Close]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot
Match: O49353 (Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN=BG5 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-12
Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H++
Sbjct: 249 NMFDAIFDAF---VWAMEKEGVKDLPMVVSETGWPSAGNGNITTPDIAGTYNRNFVKHIA 308

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN 133
           SGKGTP++PN  + GF+ + FNE+++P     N
Sbjct: 309 SGKGTPKRPNKGIDGFLFATFNENQKPVGTEQN 338

[Close]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot
Match: O22317 (Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 6.4e-11
Identity = 34/99 (34.34%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 27  SNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIA 86
           S  ++++   + +NLFD +VD+++  ++ +      NV VV+ E+ WP+ G G +A    
Sbjct: 224 SGVVVQDGRFSYQNLFDAIVDAVFAALERVGG---ANVAVVVSESGWPSAGGGAEASTSN 283

Query: 87  ASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKE 126
           A TYNQ L+ H+  G GTPR+P   ++ +I  +FNE+++
Sbjct: 284 ARTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQK 317

[Close]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot
Match: P52395 (Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 13  AFLQDMDVGFTYGISNALLKNMNDNS---KNLFDYMVDSIYVVIDNLEDEKLKNVTVVIG 72
           A+  D  +   Y    AL     +N    +NLFD M+DSIY  ++N+      N+ +V+ 
Sbjct: 130 AYANDQSIPLAY----ALFTQQGNNDVGYQNLFDAMLDSIYAALENV---GASNLQIVVS 189

Query: 73  ETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFI 117
           E+ WP+ G G  A +  A TY   L+ H SSG GTP++P  +++ ++
Sbjct: 190 ESGWPSEG-GAGASIDNAGTYYANLIRHASSGDGTPKRPGESIETYL 228

[Close]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot
Match: Q01412 (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum OX=4081 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.5e-09
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 32  KNMND-NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTY 91
           + +ND   +NLFD +VDS+Y   + L  +   N+ +++ E+ WP+ GH   A +  A TY
Sbjct: 221 QGLNDAGYQNLFDALVDSMYFATEKLGGQ---NIEIIVSESGWPSEGHP-SATLENAMTY 280

Query: 92  NQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE---DKEPQSESWNLQK 136
              L+ H+  G GTP+KP   ++ ++ ++F+E   D +P  + + L K
Sbjct: 281 YTNLINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPSEQHFGLFK 324

[Close]

BLAST of Sed0005224 vs. ExPASy TrEMBL
Match: A0A5D3CFP7 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001670 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.7e-17
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 28  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAA 87
           N+ ++   D + N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A
Sbjct: 176 NSSIRIDGDLTYNIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLA 235

Query: 88  STYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
            TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 236 LTYNKKFKNHITSGKGTPMKPNIYIEGFIRSLFNENEKPEGES 274

[Close]

BLAST of Sed0005224 vs. ExPASy TrEMBL
Match: A0A6J1HVR6 ((1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111467895 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 23  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDA 82
           T    N+L+++   +  NLFD MVD+ Y  ID    E + +V +VIGET WPT G+    
Sbjct: 213 TLSEQNSLVRDGMLSYNNLFDEMVDAFYAAIDK---ENVGDVAIVIGETGWPTCGNYNAT 272

Query: 83  GVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
             + A+ YN+   +H+SSGKGTPRK NI ++GFIRS+FNE+++P+ ES
Sbjct: 273 TPLLAAEYNRNFKSHISSGKGTPRKENIYIEGFIRSIFNENQKPEGES 317

[Close]

BLAST of Sed0005224 vs. ExPASy TrEMBL
Match: A0A5A7UIQ2 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001700 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++
Sbjct: 220 NIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLALTYNKKFKNHIT 279

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 280 SGKGTPMKPNIYIEGFIRSLFNENEKPEGES 306

[Close]

BLAST of Sed0005224 vs. ExPASy TrEMBL
Match: A0A1S3BQU9 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo OX=3656 GN=LOC103492534 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++
Sbjct: 106 NIFDEMVDAFYAAIDK---ANVGNVAIAIGETGWPTNGN-YAANPSLALTYNKKFKNHIT 165

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Sbjct: 166 SGKGTPMKPNIYIEGFIRSLFNENEKPEGES 192

[Close]

BLAST of Sed0005224 vs. ExPASy TrEMBL
Match: A0A5A7UKS6 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001680 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.3e-16
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVI-AASTYNQKLLTHM 99
           NLFD M+D+ Y  I   E E +  VT+V+GET WPT G   +   +  A  YN K  +H+
Sbjct: 223 NLFDAMMDAFYAAI---EKETIGEVTLVVGETGWPTCGDNHEIETLDIAKQYNNKFKSHI 282

Query: 100 SSGKGTPRKPNINMKGFIRSLFNEDKEPQSES 131
           SSGKGTPRKPN+ ++GFI+SLFNE+++P+ ES
Sbjct: 283 SSGKGTPRKPNVYLEGFIQSLFNENQKPEGES 311

[Close]

BLAST of Sed0005224 vs. TAIR 10
Match: AT5G20330.1 (beta-1,3-glucanase 4 )

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-15
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +KN+ +V+ ET WP+ G+G       ASTYN+  + H++
Sbjct: 240 NMFDAIFDAF---VWAMEKEGVKNLPMVVSETGWPSAGNGNFTTPAIASTYNRNFVKHIA 299

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN 133
           SGKGTP++PN +M GF+ + FNE+++P     N
Sbjct: 300 SGKGTPKRPNKSMNGFLFATFNENQKPAGTEQN 329

[Close]

BLAST of Sed0005224 vs. TAIR 10
Match: AT1G33220.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H+ 
Sbjct: 240 NMFDAIFDAF---VWAMEKEGVKDLPMVVSETGWPSAGNGNLTTPDIAGTYNRNFVKHIV 299

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEP 127
           SGKGTP++PN  M GF+ + FNE+++P
Sbjct: 300 SGKGTPKRPNNGMDGFLFATFNENQKP 323

[Close]

BLAST of Sed0005224 vs. TAIR 10
Match: AT5G20340.1 (beta-1,3-glucanase 5 )

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H++
Sbjct: 249 NMFDAIFDAF---VWAMEKEGVKDLPMVVSETGWPSAGNGNITTPDIAGTYNRNFVKHIA 308

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN 133
           SGKGTP++PN  + GF+ + FNE+++P     N
Sbjct: 309 SGKGTPKRPNKGIDGFLFATFNENQKPVGTEQN 338

[Close]

BLAST of Sed0005224 vs. TAIR 10
Match: AT5G20390.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 33/93 (35.48%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       AS YN   + H+ 
Sbjct: 239 NMFDVIFDAF---VWAMEKEGVKDLPMVVTETGWPSAGNGNLTTPDIASIYNTNFVKHVE 298

Query: 100 SGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN 133
           SGKGTP++P   + GF+ + FNE+++P     N
Sbjct: 299 SGKGTPKRPKSGISGFLFATFNENQKPAGTEQN 328

[Close]

BLAST of Sed0005224 vs. TAIR 10
Match: AT1G77780.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.0e-11
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 40  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMS 99
           N+FD  +D+  V ++ +    +K   V + ET WPT G+     V  A  YNQ LL  ++
Sbjct: 229 NIFDATLDAFNVALEKINHGSVK---VYVAETGWPTRGNDPYTSVENARAYNQGLLKKLT 288

Query: 100 SGKGTPRKPNINMKGFIRSLFNED 124
           +GKGTPR+PN+ +  F   +FNED
Sbjct: 289 TGKGTPRRPNVPVITFFFEMFNED 309

The following BLAST results are available for this feature:

BLAST of Sed0005224 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880473.1	2.7e-19	45.83	probable glucan endo-1,3-beta-glucosidase BG5 [Benincasa hispida]	[more]
TYK10034.1	9.8e-17	48.54	putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa]	[more]
XP_022968751.1	1.7e-16	46.30	probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita maxima]	[more]
XP_008451157.1	2.8e-16	52.75	PREDICTED: probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo]	[more]
KAA0055783.1	2.8e-16	52.75	putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0005224 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49352	4.7e-14	39.78	Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O49353	5.8e-12	36.56	Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O22317	6.4e-11	34.34	Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2	[more]
P52395	2.0e-09	33.64	Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q01412	3.5e-09	32.41	Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum OX=4081 PE=1 SV=1	[more]

BLAST of Sed0005224 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFP7	4.7e-17	48.54	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1HVR6	8.1e-17	46.30	(1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111467895 PE=...	[more]
A0A5A7UIQ2	1.4e-16	52.75	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BQU9	1.4e-16	52.75	(1->3)-beta-glucan endohydrolase OS=Cucumis melo OX=3656 GN=LOC103492534 PE=3 SV...	[more]
A0A5A7UKS6	2.3e-16	51.09	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Sed0005224 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20330.1	3.3e-15	39.78	beta-1,3-glucanase 4	[more]
AT1G33220.1	4.1e-13	39.08	Glycosyl hydrolase superfamily protein	[more]
AT5G20340.1	4.1e-13	36.56	beta-1,3-glucanase 5	[more]
AT5G20390.1	5.9e-12	35.48	Glycosyl hydrolase superfamily protein	[more]
AT1G77780.1	5.0e-11	39.29	Glycosyl hydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 21..128 e-value: 8.1E-19 score: 68.4
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 35..133 e-value: 3.8E-23 score: 83.9
None	No IPR available	PANTHER	PTHR32227:SF250	BETA-1,3-GLUCANASE-RELATED	coord: 23..127
IPR044965	Glycoside hydrolase family 17, plant	PANTHER	PTHR32227	GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED	coord: 23..127
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 24..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005224.1	Sed0005224.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0031224	intrinsic component of membrane
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds