Sed0005203 (gene) Chayote v1

Overview


Name	Sed0005203
Type	gene
Organism	Sechium edule (Chayote v1)
Description	tRNA threonylcarbamoyladenosine dehydratase isoform X1
Location	LG02: 47594453 .. 47602876 (+)
RNA-Seq Expression	Sed0005203
Synteny	Sed0005203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACGGCGAGAAGGCAGATATCAGTGGGAAAGGCGAGAAGGCAGGTTGAGGAAAATGGAGGGAAAATGGAAGTCTCTTTCATTGTTTGGCGCCGGAGCTTTCTTCGGTTCCGTTTCCACCTTCTTCATCCTCAAGCTCATCCACAGGCAAGTTTACCAGTCCAGCCACTTCTCTGTATGTTCCAATTTTCAATTCATCGATCATACTCGCAAATCTCTGTCTAGACCTCGAGAAATCGTCGCAGAAAATGAAAATTGATAATGTAGACTGTCTTCTAGCTTAGGGTTCCATCATTTGAAAGAAACAATCCAAGTTATGGTCATGTTTTCCCTTCTCTATCATATATCTGTTTATCGATGATAAAGACTGATGAGTTTGATTGAGCTTGCTGGCTATGATGTTAGTTTGATGATAACTTGCCGATTTCGCAGGCGGATCGCAAACCTAGCTGCAACGGAGGCAACCGGGCTGCGTGGTAAGTAGTCGTTGCTTATTGAATTTGGAAGGATGTGGGATATTCGATGAAAAACTTAATTAAACACGGCATTGTACGGAGTTCATTTGCGGCTGAATTGCGGTTTAGTTTTTTTTGTGTTGTTTTTGTGCAATCTGCAGTTGAAGATTTAGTGAAATGTGACTTATTGTTCGTTGGCATAAGTAGATTACGAGAGTGGTGTTAGATTTGAGAATGGGGTTCATCTTCTATGAATTGATTCTTCGATATTATATTACGCTTTAGAAGTACGCTACTGGGATACTGTTTAAGTCTTGAGGGTTTAGGGTTTAGAACCCTAAAACCATCCTAGGTTGACCTATTGGTTAAAGATAGCTTTGGAGATCCAAGAGGTTGTGTATTTAATCTATGGTGGCCACTTACCTAAAAAATAATTTTGTATAGGTTCTCTCGACTATTCAAATGTTATGGAGTCAGGTGGTTTGTCTCGTGAGAATAGTTGAGGCGTGCTTAAGCTGACCTGCACACTCATGAATTAAAAAAAAACTTCAATGGTCATATGGACAAATGAACTACGGGGTGACTCGCTGTATATCGATGTACTTTTTAAAGAGGAAATAAAACTTTAGTTAGAAACATTATACGCAAACATTTTATAGTTGAGGGTCATGAGCATCCGATGGCTTTGATTAGTTATGCAAAGATTTATTTGATGCGAACTGAACTATTGGTAAGTTTCCTCTTATTTTTATCGTTTTTCCTTTCTCAGTTGCTTCAAAGCCTTCCTCCTCAACTTGTGCTCTATTCTTTGTTTATCTTGGGCTATAAATTCTATTTTCCTTGTATCTTCTTCCTTCCTTTTCAAAACCTTCCGGCAACTCAAATTCACCAAAAACCAGGCCTAAGAATGCTATATTTTTTTTTTCTTTTTTCCATTTTTTTTATCCTGGTTAAGTTTTTCTGCAATTTGACAGCTTCTACTAATAATAAACGAGCATCAGCTTGTAATATAGCTCCATTGGCTGTCACACAATGAATGTCACTGGTGGATTGAGTATGCACAGTGGCGCTCAAGTCGAAGTATTTGAATTAACCCTTGTATCCATAGCTCTAGTCAGGGACTCGGGGAAGATTTGAATGTATATTTCTTTTATTTTACTTCTTGGATATTTTAAAACTTTGGCAAGAAGACCATATCATCGTTGAAATGCTCTGATCATAAGAGAAGCATTACAATTATATTCTTGATTGAAATTGATGTGTGGGCTTGTTTGTAGATTTTCTAGTATCAGTGTAAAGCATGAAAAATGAATAATGACATCAGTGCTCATGCCTCCTTTTTTTTTTTTCTGTTTCTTTTGGAACTCCCTCAAAGCAATTTTTTGGGCGTTATCATTAATTCTATTGTCTAATTCATGATTCTTGATTTGGTACTTCCTGTAAATTTGTTTTACTAATAATTATTAATAAGATGATTCCTACAATGATTGTTGCAGGTAATGGACGTATGATTGAAACCACCATCAAGGACAGTTCTGTAGTTGGGTGCACTGGTCGTGGGATTTTTGACGTAGACCTTCTAACTGATGAAATTGTTTCCGAACAACTAACAAGGTTCTTTTTTTATTTACATATAATTTTTTCATTTGATTCTGGCAAGTTGTTTTTATTATGATGGATTTGATATGATTTTTTGGAAATTTTTGTTTCTATTAGTTCTTTGATTTATCTAGGATTTAATTTTCTATGAGTTACTTGGCAACTTAATGTAGTAGTGTCCGATGGTCGTTTCATGAGATTAGTTGAGTTCAAGTAAGTTGGCTCAAAATGTCTCCAAGGGGTGGCACAGTGGTTGGAGACTTGGGCTTTGCGGATATGCTCCCCTCGAGGTCCCAAGTTCGAGACTCAGCTGTAACATTACTCCTTCGATGTCTCCAGGTGCCTGGCCTAGGGATGGGCGTAGTTACCCTTGTTTAAAAAAAAAAGTAAGTTGGCTCAAACACTCACCAGTAAAAAAATAGTTCTATAATCTATTTACTTGCGACCATTTGCATAGGGCTATATTGTGCAACCTATTTCTGTGTTTTGTTTTTCTTGGATAGATACATTTCTAACTTAGCAAATTTGTTTTATGTACTTAGCTTTTAACTGATCAATATCTTTACAATTTTTTTTTAAAGGAATCTTTGGTTTTATAATGAATATCAGGCTGTTAGTGCAAGATATAGATCTATAGACATATGATACTTTCAGAATTTTCTTTATAGTTTTTCGTCTTGTCTAAAAATATGAATGTTCATAAAAAGATTGTATATGACCATGCATCTAATTTCAATAACTTTAAGTCATGATTCCTTTGATGTCTACCGAAAGTAAATTTTTTATTTTTTATTTTTTTTCACGAGATAGACAGAGTTTGGGGTATTTCTGGACTCAAATAGGCAAACTCCTTATACTTCTATAGTTCTTAAAAAAAATCTTGGCCAATTGAGATTCCTTTTCACAATTTCCCTTGCCTTTTGTTACACATAAACTTCTTTCGTATTGTTGTCTGATCATTTTTTAAACGACCGTGTTTCCTCTCTTTCCAGTTTTTCAGATTGGAAATTATGTTTACTAGTTTCTCAAAACCCTCATCCTTAACTAAGCTCCATCTAAGTTATCAATTTTAGAACTCTAGGAAGTGAATTCAGAGTTGAGATTCAGGTGGGAATTTTCATACTTCAGCAATCGTTTATGCTCTTTACTTTGTTTTCATCAAGGAGAGTCTAGGATGAGAGAAGCACATATGAATAGTTTTCCACCCACGTCTTCCCAAAATCTAATGGAGGCTCCATAGCCAAGTTTATGCGATTTAAACCACTAGTTAGTTTTTAGGGTCCAGGTGTGATGTAAGTGTTATTATTAGGGCTGGATTTGTATTTGTTTTGATTGTTTGTTTTTTCATTCTTGTAAGTTCAGATTAGTTAATCTTCCTTAGGTAACTATTGCTTTAACCGTTTTAATTAATTCCCTGTCCCAAAAGGCTAGTTGGAAATATAAGGGAATTGGTTCTTGGATGTACGCAATAAATTTAATGAAATAACTTCGTTTTTTTCTCAGCAAGGTGTGTTTTTTATGTTGGCAGTAATCTGCTTTGCTTTTGACATGTTAATTATACACCTATTGTCATTAGGAATATTCAGTTCTTCGGACTTAGCTCTCAGAAGAATGTGACTGCATCTTATGTTGTAGTAATTGGTCTTGGTGGTGTTGGGAGTCATGCTGCTATGATGCTTCTGCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTCTTATACATATCTTTCTGGAAAATGGTGACTTTTGTAAACACTTTCTTGATTCTAGCTTCTTGTGGAATCACTAGCTTCCACTGCTTGCTAATCTGCAAAAGATTTATTTTCCCTCTAAATGAATGTGATTCCAGATGACTTCAATCATCTTCATGTCAAGTCTTAGCATTCATTAGCTTTTATGTCCAATATAGTACTTTTATATAGTTACTGACCAGGGTTTCGTAGCCTGATGGCCTGGAAGATGGACTGAATTTCAGTCTAACCCTGGTTGCAGGCTTGATTCCCAGTTGGTCAAGAGAAGAGACTTTGAGGAAAATACTTTTATATAGTTAACGTATTTTATAATTTTATGAATCTTCCTAGATTTGGTGTCAGTACATTATATCTACATCCAAATGTATGAATATGATGCATCTATCTTCTTTCTTGTAGCATGTATGCTCATTTGATTATTGCTTGAAAAGGTGTCACTTTCTTCTCTAAATCGGCATGCTGTTGCAACAAGAGCAGATGTCGGTGTCCCAAAAGCTCAGTGCCTGAAGGAGCACTTTCTGTCTATCTTTCCAGAGTGTCAAGTCGAAGCAAAAGTGTTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTTTAGACTGCATTGACAATATTGACACAAAGGTGCCTATTTATCTGCAACGCTATAACTGATACTAAATCTACTTATTATTTTTAAAAAAATGATTTAATCAGCAGCTGTTTTAATATTGATGCTAAATTGAAATATAGAGAGATGGTAACAAAGGATGATGGTATTAGAAAATTACCATACTCACATGTGACATTACTCCTTCAATGTCTCCGGTGCCTGGCCTAGGGACGGGCGTGGTTCCCTTGTTTCAAAAATATTACCATACTTTCAGTAATATAAAAGAAGCAATAGTTCACTATTTATTGAGGTCATTTACCAAAACCATCTTTGTGAAACACTATACAATTGGGGGTGGGGTATTGCTTAGGTCTCCTGTTAAGTTTACATATGCGAGGAAAAATAGGAGAGAAGGAATAAGGGCCTCTAGGGTGATGATAAATTTTCCATGTAAACAAGCTTTTTGGCCAAAGGAATAGTTTGTTTATTTGTTTTTTTTAAATGCTATTGATGTCGTAAAATTTTACTTCTATTTATTGATGTTTATATTTGAATGTGGTTTTCTGATAGGAATTTGTTTTAAATGCTTTGTATATCATATGTGATAGGTATCACTTCTTGCTGCGTGTGTACGTAGGGGCTTGAAAGTATTATCAGCAACAGGAGCCGGAGCTCGTGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAAAGAGTCAACAAATGACCCGTTATCTCGATCCGTAATGTTTCTAGCATGCAACAAGAATTTTCTTTTAAGCTAAATATTTTTTTAACCAGATCCCTTCTAGAAGGCTGCATCAGAGAAGTCAACAAATTGTTTCTTTTCCACAAAAAAAAAAAAAAAAACAAACAAAACAGAAAAAAAAAAAACAAACAGACATGTTTTAAATTCAACTCTTAATTTAGAGGATAGTTTGTCATTTATTTTGGTTTGGCTCATATAAACTTTTAAATCACTTTATTTTTTATTTTTGTGTTCGGAAATCAATTAGAAGGTTAGTGAGTCACTTAGAAAGAATAATACTTGTAAGTGAAACTCTTAAAAGCACTTGAAAAGATAATTGTCGTGTTAAGTAGATAACAACTCCCTTTTCTTGTGTTGGGCTAACATTTACTAGTATATCATTTTACGATATGCCTGTTAATTAATTATATAATAATGCACCAACGTTGAAAAACTCTTTTTTGAGAATTTAGTCTGTGGATATTTGTCAACTATAGGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTGTTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAGGGGGAGAAGCTGAAAATCCTTCAGATTATCAGGTGATGAATTTACATGTGATACAAAAATATCTTTTTATAGCAAGACCAGCATGCTTTAGGGCTACTTTATGTACTTGGTTCTGAGGTAAACAATTCTCGACTTGACAATCAATGAATTGTGTTGAATAATAGTTGGTAGATTCTGTAAAAAAAAAATAGTTGGTAGATTCCGTAAAAAAAAAGTTGGTAAGTGTCGCACTGAAAAAGTATCTCAGCAGTGGCTAAACATTCTAAATTTTTATCATGATATCAGATAGTACCTGGTTTCAGAGTTCGCATCATACCTGTTCTGGGCACCATCCCTGCAATTTTTGGACAGATAATGGCCTCATATGTTGTGACACAACTAGCAGGGCTACAAGTGGAAACAGAGCCGGTCGTTAATTTGGACATTGATCATTATAAGTTGCTTCATCAGCGACTCATTGAACATGAGGAATTATTATATGGCACTGCCATGCAAGTTCAGGTGTACAGACTTTCATCTGAAGCCTTAATTAATTTTGCACTGTGTTATGCTGATGTTTCCATTGTCCTCTTTTTTACTTCTTTTGGATTTGTTTGCATGCTTGCTAGTTACAAGTTGAAAGATGTTGATGTTTTCTGAGTTGGACATCTTCACTATGATTTTGAGTGTATGAGGTTCTTCTATTCCAGTTATGCACTTTTTAGTTTCCATGTCTAAATGACTCATCAATAGAGTACATCTTTTTTGTAACTGCAGTCTATCATTCAGTTGTTGGATTCCAATAGTTATCATTTTTATGGCGTATCCGTGTATTTGATAGGGTTGGGTCTTAGTAGAAATAGGAATAATATAAGGGTATGTTAGCAATTACTTGGGGAGTAAGTTGCAATTACTTGGAGAGTAAGTTACGGTATTTTATTATAAATAGAGAGGGTTAGCCTAGGTTTAAGGCATCCAAATATTGAATGATTAATTGAGTGATTTATTGTAGGGCTCAAGAGATTCTCTTGAGAGGGGAGGTTCCAAGTTCCTATCAAAACTTGGCTTATCTTGTAATTTGTTATCTTTTGATATATTCTAGATCCTGGATCATATCAGTATTCTGATCCCATTTACTATAGGTGGATGTTGAAGAAGTGATGTTTGTTACAAAAGAGCTCTGGCATGGAAGAAGTGCAAGAGAGCAATCTGCAAAAGATGTTGGACGCGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTATGAATAGATTTTCTGTTCGTCTTGCCTATATTCAATAATATTTGCTGGGATTTAAATAGAAAGGTATCTTGGCCCCACTTTTTCTCGTTTCTATGAACATGAACATTGATTAATCATCTCCGTTTGTTAAAATTATATAATATCTTCTGGGTTTTATATGTCTTATTGTGGAAGATAAACGTATATTTTACTCAGATTCCTATAACTACCTCAATTTTTGTTTCCATAACATGGGACGATGCGATGCGAATATGAAGTGTTTGGATATCCCAAACATTTCACTAACATAAAATGAAGATTGCCATAAGTTAACAGGATATGTTATAGATGTTCAGTTTCTCTGGTGCTGACATTTTGTGTACAAATTAGGTGGGACCGAGAAAAGCCAGCATCTGTGGATAACTTAATTCTTTTGAAATTTAAAGAGGTAATTCAGCTTTACTCGTTCTATGGATTTCTAGATATATTACGGATGATCGTTCTATTATGTTTTGCAACTCATCTGTGTTTCTGTCATTTCTTTTATCCTATGATTTGAAGTCATTCACATTCTTGACCAATTCTGTACTTCGTTTAAAAGTGAGCGTCTATCCTTGCCTGCTTGCATTTCCCTCCCTTAGTACAGCAAACGAGTAACTTCAAAATTTGAAGGAACTTTTTTTTTTCTTCGAAAAATGGGAAGGTTGTTTACTAGATGTTAATGTAGATCGCTGAACTCGTTTGTTTTTCACACCTTTTAAATCTAAAAAACCTAAAAGTAGACTTTTTATGAAACTGACTAAGCTTTTGCGGATAAAATTCTTTGTTTTGCACGATTACTTTCCTTCTATGAAGTGCAAAAAGACGGACATAGTCCTCTTATACAACACACTCAGTCATATCATATGCATACGTTACCTTGTAATCATTTTTATGAAAAAAGAATTCGTTGAATAAAAATAAATTTAAGTTGTGAATTTCCATACTCATTTCATTTTGGTGTTTAGTCACTACTGGTTTCATCTTGGTCCTAAAGTACCCATGCGAATGATAAGGAGCTCTTTATGATTGATGGAAAGTTGAGTTTAGTCATGTGGTTCTTTGATGCAGGCTGATGAACATGAGTCAACGACTCTAGATGACATAAAAGAAAAGGAGCCTGAATTCTTTATGAGGGTAACTGCTATTTTGAAGCGAGCCGAGATAGAATTTTCCTTGTGAAAATATACATTTTTTTTGGGGGATTAGATTAGGATTTGTTGCTTTCATCCCAATCTTTTTAATTTTCTTTAGTTTCACAGGGAGGTTTTAGTGGTGTCTTAATTGCCAAGCCTTAGATTATCAATTTTACAGTTAAACAAAATTTTGGTGTAATGAATTATATTTTTGAGATTCTGAAATCTAGTTTGTTGCTGCGGTC

mRNA sequence

GAACGGCGAGAAGGCAGATATCAGTGGGAAAGGCGAGAAGGCAGGTTGAGGAAAATGGAGGGAAAATGGAAGTCTCTTTCATTGTTTGGCGCCGGAGCTTTCTTCGGTTCCGTTTCCACCTTCTTCATCCTCAAGCTCATCCACAGGCGGATCGCAAACCTAGCTGCAACGGAGGCAACCGGGCTGCGTGGTAATGGACGTATGATTGAAACCACCATCAAGGACAGTTCTGTAGTTGGGTGCACTGGTCGTGGGATTTTTGACGTAGACCTTCTAACTGATGAAATTGTTTCCGAACAACTAACAAGGAATATTCAGTTCTTCGGACTTAGCTCTCAGAAGAATGTGACTGCATCTTATGTTGTAGTAATTGGTCTTGGTGGTGTTGGGAGTCATGCTGCTATGATGCTTCTGCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTGTCACTTTCTTCTCTAAATCGGCATGCTGTTGCAACAAGAGCAGATGTCGGTGTCCCAAAAGCTCAGTGCCTGAAGGAGCACTTTCTGTCTATCTTTCCAGAGTGTCAAGTCGAAGCAAAAGTGTTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTTTAGACTGCATTGACAATATTGACACAAAGGTATCACTTCTTGCTGCGTGTGTACGTAGGGGCTTGAAAGTATTATCAGCAACAGGAGCCGGAGCTCGTGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAAAGAGTCAACAAATGACCCGTTATCTCGATCCGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTGTTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAGGGGGAGAAGCTGAAAATCCTTCAGATTATCAGATAGTACCTGGTTTCAGAGTTCGCATCATACCTGTTCTGGGCACCATCCCTGCAATTTTTGGACAGATAATGGCCTCATATGTTGTGACACAACTAGCAGGGCTACAAGTGGAAACAGAGCCGGTCGTTAATTTGGACATTGATCATTATAAGTTGCTTCATCAGCGACTCATTGAACATGAGGAATTATTATATGGCACTGCCATGCAAGTTCAGGTGGATGTTGAAGAAGTGATGTTTGTTACAAAAGAGCTCTGGCATGGAAGAAGTGCAAGAGAGCAATCTGCAAAAGATGTTGGACGCGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTGGGACCGAGAAAAGCCAGCATCTGTGGATAACTTAATTCTTTTGAAATTTAAAGAGGCTGATGAACATGAGTCAACGACTCTAGATGACATAAAAGAAAAGGAGCCTGAATTCTTTATGAGGGTAACTGCTATTTTGAAGCGAGCCGAGATAGAATTTTCCTTGTGAAAATATACATTTTTTTTGGGGGATTAGATTAGGATTTGTTGCTTTCATCCCAATCTTTTTAATTTTCTTTAGTTTCACAGGGAGGTTTTAGTGGTGTCTTAATTGCCAAGCCTTAGATTATCAATTTTACAGTTAAACAAAATTTTGGTGTAATGAATTATATTTTTGAGATTCTGAAATCTAGTTTGTTGCTGCGGTC

Coding sequence (CDS)

ATGGAGGGAAAATGGAAGTCTCTTTCATTGTTTGGCGCCGGAGCTTTCTTCGGTTCCGTTTCCACCTTCTTCATCCTCAAGCTCATCCACAGGCGGATCGCAAACCTAGCTGCAACGGAGGCAACCGGGCTGCGTGGTAATGGACGTATGATTGAAACCACCATCAAGGACAGTTCTGTAGTTGGGTGCACTGGTCGTGGGATTTTTGACGTAGACCTTCTAACTGATGAAATTGTTTCCGAACAACTAACAAGGAATATTCAGTTCTTCGGACTTAGCTCTCAGAAGAATGTGACTGCATCTTATGTTGTAGTAATTGGTCTTGGTGGTGTTGGGAGTCATGCTGCTATGATGCTTCTGCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTGTCACTTTCTTCTCTAAATCGGCATGCTGTTGCAACAAGAGCAGATGTCGGTGTCCCAAAAGCTCAGTGCCTGAAGGAGCACTTTCTGTCTATCTTTCCAGAGTGTCAAGTCGAAGCAAAAGTGTTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTTTAGACTGCATTGACAATATTGACACAAAGGTATCACTTCTTGCTGCGTGTGTACGTAGGGGCTTGAAAGTATTATCAGCAACAGGAGCCGGAGCTCGTGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAAAGAGTCAACAAATGACCCGTTATCTCGATCCGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTGTTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAGGGGGAGAAGCTGAAAATCCTTCAGATTATCAGATAGTACCTGGTTTCAGAGTTCGCATCATACCTGTTCTGGGCACCATCCCTGCAATTTTTGGACAGATAATGGCCTCATATGTTGTGACACAACTAGCAGGGCTACAAGTGGAAACAGAGCCGGTCGTTAATTTGGACATTGATCATTATAAGTTGCTTCATCAGCGACTCATTGAACATGAGGAATTATTATATGGCACTGCCATGCAAGTTCAGGTGGATGTTGAAGAAGTGATGTTTGTTACAAAAGAGCTCTGGCATGGAAGAAGTGCAAGAGAGCAATCTGCAAAAGATGTTGGACGCGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTGGGACCGAGAAAAGCCAGCATCTGTGGATAACTTAATTCTTTTGAAATTTAAAGAGGCTGATGAACATGAGTCAACGACTCTAGATGACATAAAAGAAAAGGAGCCTGAATTCTTTATGAGGGTAACTGCTATTTTGAAGCGAGCCGAGATAGAATTTTCCTTGTGA

Protein sequence

MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSVVGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLKESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLYGTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDNLILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL

Homology

[Close]

BLAST of Sed0005203 vs. NCBI nr
Match: XP_038893153.1 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Benincasa hispida])

HSP 1 Score: 841.6 bits (2173), Expect = 3.1e-240
Identity = 431/464 (92.89%), Postives = 444/464 (95.69%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK KS SL GAGA FGSVSTFFIL+L+HRRIAN A T+AT L GNG M+ETT+KDS V
Sbjct: 1   MEGKLKSFSLVGAGALFGSVSTFFILRLLHRRIANQAETKATKLCGNGHMVETTVKDSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           VGCT RGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VGCTNRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           A SEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 AASEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVAN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           LILLKFKEADEHES+TLDDIKEKEPEFF +V AILKRAE+EFSL
Sbjct: 421 LILLKFKEADEHESSTLDDIKEKEPEFFRKVNAILKRAEMEFSL 464

[Close]

BLAST of Sed0005203 vs. NCBI nr
Match: XP_008438196.1 (PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo] >KAA0049057.1 tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo var. makuwa] >TYK17506.1 tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 836.3 bits (2159), Expect = 1.3e-238
Identity = 427/464 (92.03%), Postives = 445/464 (95.91%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK+KSLSL GAGA FGSVSTFFILKL+HR+IA+ A ++AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           VGCT RG+ DVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VGCTNRGLSDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           LILLKFKEADEHES+TLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 421 LILLKFKEADEHESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Sed0005203 vs. NCBI nr
Match: XP_008438195.1 (PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucumis melo])

HSP 1 Score: 829.3 bits (2141), Expect = 1.6e-236
Identity = 427/471 (90.66%), Postives = 445/471 (94.48%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK+KSLSL GAGA FGSVSTFFILKL+HR+IA+ A ++AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLT-------RNIQFFGLSSQKNVTASYVVVIGLGGVGS 120
           VGCT RG+ DVDLLTDEIVSEQLT       RNIQFFGLSSQKNVTASYVVVIGLGGVGS
Sbjct: 61  VGCTNRGLSDVDLLTDEIVSEQLTSYVPVVLRNIQFFGLSSQKNVTASYVVVIGLGGVGS 120

Query: 121 HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVE 180
           HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VE
Sbjct: 121 HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVE 180

Query: 181 AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR 240
           AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR
Sbjct: 181 AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR 240

Query: 241 IRVADLKESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSD 300
           IRVADL+ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSD
Sbjct: 241 IRVADLRESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSD 300

Query: 301 YQIVPGFRVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLI 360
           YQIVPGFRVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLI
Sbjct: 301 YQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLI 360

Query: 361 EHEELLYGTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDRE 420
           EHEE LYGTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR 
Sbjct: 361 EHEESLYGTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRA 420

Query: 421 KPASVDNLILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           KPASV NLILLKFKEADEHES+TLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 421 KPASVSNLILLKFKEADEHESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 471

[Close]

BLAST of Sed0005203 vs. NCBI nr
Match: XP_023538843.1 (tRNA threonylcarbamoyladenosine dehydratase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 827.8 bits (2137), Expect = 4.7e-236
Identity = 423/464 (91.16%), Postives = 440/464 (94.83%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK KSLS+ GAGA FGSVSTFFILKLI+RR+AN A T+AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKLKSLSMVGAGALFGSVSTFFILKLINRRLANQAETKATKLRGNGHMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           V CT  GI DVDLLTDEIVSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VACTSHGISDVDLLTDEIVSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLDI+HY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+Q AKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVAN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           L+LL+FKEADEHES TLDDIKE EPEFF RVT +LKRAE+EF L
Sbjct: 421 LVLLRFKEADEHESATLDDIKENEPEFFTRVTGVLKRAEMEFFL 464

[Close]

BLAST of Sed0005203 vs. NCBI nr
Match: XP_022932713.1 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucurbita moschata])

HSP 1 Score: 827.0 bits (2135), Expect = 8.0e-236
Identity = 423/462 (91.56%), Postives = 438/462 (94.81%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK KSLS+ GAGA FGSVSTFFILKLI+RRIAN A T+ T LRGNG M+ETT+K S  
Sbjct: 1   MEGKLKSLSMVGAGALFGSVSTFFILKLINRRIANQAETKETKLRGNGHMVETTVKGSPA 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           V CT  GI DVDLLTDEIVSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VACTSHGISDVDLLTDEIVSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLDI+HY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+Q AKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVAN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEF 463
           LILL+FKEADEHES TLDDIKE EPEFF RVT +LKRAE+EF
Sbjct: 421 LILLRFKEADEHESATLDDIKENEPEFFTRVTGVLKRAEMEF 462

[Close]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot
Match: O13861 (tRNA threonylcarbamoyladenosine dehydratase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1A6.10 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.1e-65
Identity = 142/365 (38.90%), Postives = 210/365 (57.53%), Query Frame = 0


Query: 76  DEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQV 135
           + ++ EQL RN  FFG    + +  S+V+V+G GGVGS    ML RSGV ++ +VDFDQV
Sbjct: 102 ENLIREQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQKIRIVDFDQV 161

Query: 136 SLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFV 195
           SLSSLNRH++AT  DVG PK   +K+      P  +V+A+  L++  S +++LSG PDFV
Sbjct: 162 SLSSLNRHSIATLQDVGTPKTLAIKKAIKKFAPWIEVDARNALFNPDSADDLLSGNPDFV 221

Query: 196 LDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLKESTNDPLSRSVRHRL 255
           +D IDNI TKV LL+ C    L V+++TG+  ++DPTR+ +AD+  ++ DPLSR+ R RL
Sbjct: 222 IDAIDNIQTKVDLLSYCYNHKLPVIASTGSACKSDPTRVNIADISATSEDPLSRATRRRL 281

Query: 256 RKGYGIEGGIPVVFSLEKP---KAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIP 315
           R   GI  GIPVVFS EKP   KA LLP      E  +  +   +P FR RI+PV+G +P
Sbjct: 282 RL-LGIMEGIPVVFSTEKPDPRKASLLPLSEEEFEKGDVDELSALPEFRARILPVIGPMP 341

Query: 316 AIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLYGTAMQVQVDVEE 375
            IFG  +A+YV+T +A  +   +P+  +          + +  E    G  +    +  E
Sbjct: 342 GIFGLTIATYVLTSIA--KYPMDPISTMTRPRLYEEAVKRLHAEARKAGVNLDKTFNASE 401

Query: 376 VMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDNLILLKFKEADEH 435
           + ++ +E++ GRSA                 ++ +VRW+ + P    NL+ +   EA  H
Sbjct: 402 MSYIIEEVYVGRSALPPHES----------QKVTVVRWNPQLPFDHTNLVAMTRNEARYH 453

Query: 436 ESTTL 438
           E   L
Sbjct: 462 EDNVL 453

[Close]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot
Match: P36101 (tRNA threonylcarbamoyladenosine dehydratase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TCD2 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-62
Identity = 138/367 (37.60%), Postives = 213/367 (58.04%), Query Frame = 0


Query: 76  DEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQV 135
           ++ + + L  N++F G  + + ++  YVVV+G GGVGS     L+RSG  ++ +VDFDQV
Sbjct: 62  EQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVDFDQV 121

Query: 136 SLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEIL--SGKPD 195
           SLSSLNRH+ A   DVG PK +CL+ H   I P C+++    L+   + E +   +G PD
Sbjct: 122 SLSSLNRHSCAILNDVGTPKVECLRRHMREIAPWCEIDPINELWTLQNGERLTLGNGTPD 181

Query: 196 FVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLKESTNDPLSRSVRH 255
           F++DCIDNIDTKV LL      G+KV+S+ GA A++DPT++ V DL  +  DPL+R VR 
Sbjct: 182 FIVDCIDNIDTKVDLLEFAYNHGIKVISSMGASAKSDPTKLNVGDLATTEEDPLARVVRR 241

Query: 256 RLRKGYGIEGGIPVVFSLEKP---KAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGT 315
           +L+K  GI  GIPVVFS EKP   KAKLLP      E     +   +  FRVRI+PVLGT
Sbjct: 242 KLKK-RGILSGIPVVFSAEKPDPKKAKLLPLPDEEYERGKVDELSALKDFRVRILPVLGT 301

Query: 316 IPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLYGTAMQVQVDV 375
           +P++FG  + +++++ ++   +E     N  I  Y  ++Q L      +   + ++ + +
Sbjct: 302 MPSLFGLTITTWILSNISDKPLEPVEGKN-RIKVYDGIYQSLAGQMSRVGIPSQRIPLAL 361

Query: 376 EEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDNLILLKFKEAD 435
           ++V ++ +E++ G+S     +             L L +WD  KP S+ N+++L   E  
Sbjct: 362 KDVSYLVEEVFKGKSPISGIS-----------TRLTLTKWDPSKPISLQNVVVLTKNEQK 415

Query: 436 EHESTTL 438
            HE   L
Sbjct: 422 VHEDRVL 415

[Close]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot
Match: P38756 (tRNA threonylcarbamoyladenosine dehydratase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TCD1 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-46
Identity = 113/367 (30.79%), Postives = 194/367 (52.86%), Query Frame = 0


Query: 76  DEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQV 135
           D +  EQL RN  F G    + +   Y+V++G G VGS    ML+RSG  +++++D + +
Sbjct: 50  DHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIRSGCQKIMIIDPENI 109

Query: 136 SLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEIL---SGKP 195
           S+ SLN H  A  +D+G PK QCLKEH   I P  +++A+   +   +  +++      P
Sbjct: 110 SIDSLNTHCCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHDLIFADGESP 169

Query: 196 DFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLKESTNDPLSRSVR 255
            F++DC+DN+++KV LL       + V+S+ G   ++DPTR+ + D+  +  DP+SR VR
Sbjct: 170 TFIVDCLDNLESKVDLLEYAHHNKIDVISSMGVATKSDPTRVSINDISMTEFDPISRCVR 229

Query: 256 HRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIP 315
            +LRK  GI  GI VVFS E    +      P  + E+ +    V    +R +P LGT+P
Sbjct: 230 RKLRK-RGIATGISVVFSNEMLDPRRDDILSP-IDCEHRA-INAVRDEALRHLPELGTMP 289

Query: 316 AIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLYGTAMQVQVDVEE 375
            IFG  +A++++T+++G  ++   V N    +  +L     +   L         + +EE
Sbjct: 290 GIFGLSIATWILTKVSGYPMKENEVKNRLKFYDSILETFQKQMARLNENKERSSLLGLEE 349

Query: 376 VMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDNLILLKFKEADEH 435
           V ++ +E++ G+S     +            +L L +W+  K  S+ N++L+  +E + H
Sbjct: 350 VGYIVEEMFRGKSPISGYS-----------TKLALTKWEANKEISLTNVVLMTKEEQEIH 402

Query: 436 ESTTLDD 440
           E   L D
Sbjct: 410 EKRILLD 402

[Close]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot
Match: O32037 (tRNA threonylcarbamoyladenosine dehydratase OS=Bacillus subtilis (strain 168) OX=224308 GN=tcdA PE=3 SV=3)

HSP 1 Score: 142.9 bits (359), Expect = 9.1e-33
Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 0


Query: 82  QLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLN 141
           Q +RN    G    + +  S V V+G+GGVGS AA  L RSGVGR+LLVD D V ++++N
Sbjct: 4   QFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVN 63

Query: 142 RHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDN 201
           R   A  + VG PK   +K     I PEC+V A  + Y   + E+      D+V+D  D 
Sbjct: 64  RQLHALLSTVGQPKVDLMKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDASDT 123

Query: 202 IDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLKESTNDPLSRSVRHRLRKGYGI 261
           I  K+ L+  C++R + ++S+ GA  + DPTR ++AD+ ++  DP+++ VR +LRK  GI
Sbjct: 124 ICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRK-EGI 183

Query: 262 EGGIPVVFSLEKP 275
           + G+ V+FS E P
Sbjct: 184 KKGVQVIFSDESP 195

[Close]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot
Match: Q57097 (tRNA threonylcarbamoyladenosine dehydratase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=tcdA PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.5e-27
Identity = 64/172 (37.21%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 101 SYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLK 160
           +++ VIG+GGVGS     L RSG+G L L+D D + ++++NR   A    +G  K + + 
Sbjct: 34  AHICVIGIGGVGSWVVEALARSGIGELTLIDMDDICVTNINRQLPAMSGTIGKLKTEVMS 93

Query: 161 EHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVL 220
           E    I PEC V          ++ + L+   D+V+D IDN+ TK SL+A C R  + V+
Sbjct: 94  ERVKLINPECTVNIIDDFISPENQSDYLNRGYDYVIDAIDNVKTKASLIAYCKRNKINVI 153

Query: 221 SATGAGARADPTRIRVADLKESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLE 273
           +  GAG + DPT+I++ADL ++  DPL   VR  LRK Y         FS++
Sbjct: 154 TIGGAGGQTDPTQIQIADLSKTIQDPLLAKVRSVLRKDYNFSQNPKRKFSID 205

[Close]

BLAST of Sed0005203 vs. ExPASy TrEMBL
Match: A0A5D3D3C0 (tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003730 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.4e-239
Identity = 427/464 (92.03%), Postives = 445/464 (95.91%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK+KSLSL GAGA FGSVSTFFILKL+HR+IA+ A ++AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           VGCT RG+ DVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VGCTNRGLSDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           LILLKFKEADEHES+TLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 421 LILLKFKEADEHESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Sed0005203 vs. ExPASy TrEMBL
Match: A0A1S3AWE8 (tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483373 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.4e-239
Identity = 427/464 (92.03%), Postives = 445/464 (95.91%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK+KSLSL GAGA FGSVSTFFILKL+HR+IA+ A ++AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           VGCT RG+ DVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VGCTNRGLSDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           LILLKFKEADEHES+TLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 421 LILLKFKEADEHESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Sed0005203 vs. ExPASy TrEMBL
Match: A0A1S3AWF9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483373 PE=4 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 7.8e-237
Identity = 427/471 (90.66%), Postives = 445/471 (94.48%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK+KSLSL GAGA FGSVSTFFILKL+HR+IA+ A ++AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLT-------RNIQFFGLSSQKNVTASYVVVIGLGGVGS 120
           VGCT RG+ DVDLLTDEIVSEQLT       RNIQFFGLSSQKNVTASYVVVIGLGGVGS
Sbjct: 61  VGCTNRGLSDVDLLTDEIVSEQLTSYVPVVLRNIQFFGLSSQKNVTASYVVVIGLGGVGS 120

Query: 121 HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVE 180
           HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VE
Sbjct: 121 HAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVE 180

Query: 181 AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR 240
           AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR
Sbjct: 181 AKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTR 240

Query: 241 IRVADLKESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSD 300
           IRVADL+ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSD
Sbjct: 241 IRVADLRESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSD 300

Query: 301 YQIVPGFRVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLI 360
           YQIVPGFRVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLD DHY+LLHQRLI
Sbjct: 301 YQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLI 360

Query: 361 EHEELLYGTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDRE 420
           EHEE LYGTAMQVQVDVEEVMFV KELWHGRSAR+QSAKDVGRGMWRAINELMLVRWDR 
Sbjct: 361 EHEESLYGTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRA 420

Query: 421 KPASVDNLILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           KPASV NLILLKFKEADEHES+TLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 421 KPASVSNLILLKFKEADEHESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 471

[Close]

BLAST of Sed0005203 vs. ExPASy TrEMBL
Match: A0A6J1F2I9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439179 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.9e-236
Identity = 423/462 (91.56%), Postives = 438/462 (94.81%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK KSLS+ GAGA FGSVSTFFILKLI+RRIAN A T+ T LRGNG M+ETT+K S  
Sbjct: 1   MEGKLKSLSMVGAGALFGSVSTFFILKLINRRIANQAETKETKLRGNGHMVETTVKGSPA 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           V CT  GI DVDLLTDEIVSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VACTSHGISDVDLLTDEIVSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQLAGLQVETEPVVNLDI+HY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+Q AKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVAN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEF 463
           LILL+FKEADEHES TLDDIKE EPEFF RVT +LKRAE+EF
Sbjct: 421 LILLRFKEADEHESATLDDIKENEPEFFTRVTGVLKRAEMEF 462

[Close]

BLAST of Sed0005203 vs. ExPASy TrEMBL
Match: A0A6J1I7L9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470738 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.1e-236
Identity = 423/464 (91.16%), Postives = 440/464 (94.83%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHRRIANLAATEATGLRGNGRMIETTIKDSSV 60
           MEGK KSLS+ GAGA FGSVSTFFILKLI+RR+AN A T+AT LRGNG M+ETT+K S V
Sbjct: 1   MEGKLKSLSMVGAGALFGSVSTFFILKLINRRLANQAETKATKLRGNGHMVETTVKGSPV 60

Query: 61  VGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLL 120
           V CT   I DVDLLTDEIVSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLL
Sbjct: 61  VACTSHEISDVDLLTDEIVSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLL 120

Query: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180
           RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD
Sbjct: 121 RSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYD 180

Query: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLK 240
           ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL+
Sbjct: 181 ATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLR 240

Query: 241 ESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300
           ESTNDPLSR+VRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF
Sbjct: 241 ESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGF 300

Query: 301 RVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELLY 360
           RVRIIPVLGTIPAIFGQ+MASYVVTQ+AGLQVETEPVVNLDI+HY+LLHQRLIEHEE LY
Sbjct: 301 RVRIIPVLGTIPAIFGQVMASYVVTQIAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLY 360

Query: 361 GTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVDN 420
           GTAMQVQVDVEEVMFV KELWHGRSAR+Q AKDVGRGMWRAINELMLVRWDR KPASV N
Sbjct: 361 GTAMQVQVDVEEVMFVAKELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVAN 420

Query: 421 LILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEFSL 465
           LILL+FKEADEHES TLDDIKE EPEFF RVT +LKRAE+EF L
Sbjct: 421 LILLRFKEADEHESATLDDIKENEPEFFTRVTGVLKRAEMEFFL 464

[Close]

BLAST of Sed0005203 vs. TAIR 10
Match: AT5G37530.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 682.2 bits (1759), Expect = 3.0e-196
Identity = 348/463 (75.16%), Postives = 397/463 (85.75%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHR-RIANLAATEATGLRGNGRMIETTIKDSS 60
           ME K K LSL GAGA  GS+ST  +LKL+ R  +  L     T   GNG  IE+  +  +
Sbjct: 1   MEEKSKYLSLVGAGALIGSISTVALLKLLSRSSLKQLNENPETNFLGNG--IESETRPDT 60

Query: 61  VVGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMML 120
           V           DLL DEIVSE LTRNIQFFGL SQ  VT SYVVVIGLGGVGSHAA ML
Sbjct: 61  VAN-------GQDLLKDEIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASML 120

Query: 121 LRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLY 180
           LRSGVG+LLLVDFDQVSLSSLNRHAVATRADVG+PKA CLK+HF SIFPEC +EAKV+LY
Sbjct: 121 LRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAMCLKKHFSSIFPECHIEAKVMLY 180

Query: 181 DATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADL 240
           D++SEEEILSGKPDFVLDCIDNIDTKV LLAACV+RGLKVLSATGAGARADPTRIRVAD+
Sbjct: 181 DSSSEEEILSGKPDFVLDCIDNIDTKVGLLAACVKRGLKVLSATGAGARADPTRIRVADI 240

Query: 241 KESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPG 300
           +EST DPLSRSVRHRLR+ +GIEGGIPVVFSLEKPKAKLLPF+G  GE ENP DYQ+VPG
Sbjct: 241 RESTIDPLSRSVRHRLRRKHGIEGGIPVVFSLEKPKAKLLPFEGTNGEDENPLDYQVVPG 300

Query: 301 FRVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEELL 360
           FRVRIIPVLGTIPAIFGQIMASYV+TQLAG+QV+ EP+VNLD+DHY+LLHQRLIEHEE +
Sbjct: 301 FRVRIIPVLGTIPAIFGQIMASYVITQLAGVQVQMEPIVNLDLDHYRLLHQRLIEHEETV 360

Query: 361 YGTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASVD 420
           YGT+ +V+VDVEEVM++ KELWHGRSAR+++AKDVGRGMWRA+NELMLVRWD +KPA+V 
Sbjct: 361 YGTSAEVEVDVEEVMYIVKELWHGRSARDETAKDVGRGMWRAMNELMLVRWDAKKPATVS 420

Query: 421 NLILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEF 463
           NL+LLKFKEADEHE+ TL+++KE E EFF RV+ +LK+AE++F
Sbjct: 421 NLVLLKFKEADEHETKTLEEVKESETEFFERVSCVLKKAELDF 454

[Close]

BLAST of Sed0005203 vs. TAIR 10
Match: AT5G37530.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 679.5 bits (1752), Expect = 1.9e-195
Identity = 349/464 (75.22%), Postives = 398/464 (85.78%), Query Frame = 0


Query: 1   MEGKWKSLSLFGAGAFFGSVSTFFILKLIHR-RIANLAATEATG-LRGNGRMIETTIKDS 60
           ME K K LSL GAGA  GS+ST  +LKL+ R  +  L     T  L GNG  IE+  +  
Sbjct: 1   MEEKSKYLSLVGAGALIGSISTVALLKLLSRSSLKQLNENPETNFLAGNG--IESETRPD 60

Query: 61  SVVGCTGRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMM 120
           +V           DLL DEIVSE LTRNIQFFGL SQ  VT SYVVVIGLGGVGSHAA M
Sbjct: 61  TVAN-------GQDLLKDEIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASM 120

Query: 121 LLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLL 180
           LLRSGVG+LLLVDFDQVSLSSLNRHAVATRADVG+PKA CLK+HF SIFPEC +EAKV+L
Sbjct: 121 LLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAMCLKKHFSSIFPECHIEAKVML 180

Query: 181 YDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVAD 240
           YD++SEEEILSGKPDFVLDCIDNIDTKV LLAACV+RGLKVLSATGAGARADPTRIRVAD
Sbjct: 181 YDSSSEEEILSGKPDFVLDCIDNIDTKVGLLAACVKRGLKVLSATGAGARADPTRIRVAD 240

Query: 241 LKESTNDPLSRSVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVP 300
           ++EST DPLSRSVRHRLR+ +GIEGGIPVVFSLEKPKAKLLPF+G  GE ENP DYQ+VP
Sbjct: 241 IRESTIDPLSRSVRHRLRRKHGIEGGIPVVFSLEKPKAKLLPFEGTNGEDENPLDYQVVP 300

Query: 301 GFRVRIIPVLGTIPAIFGQIMASYVVTQLAGLQVETEPVVNLDIDHYKLLHQRLIEHEEL 360
           GFRVRIIPVLGTIPAIFGQIMASYV+TQLAG+QV+ EP+VNLD+DHY+LLHQRLIEHEE 
Sbjct: 301 GFRVRIIPVLGTIPAIFGQIMASYVITQLAGVQVQMEPIVNLDLDHYRLLHQRLIEHEET 360

Query: 361 LYGTAMQVQVDVEEVMFVTKELWHGRSAREQSAKDVGRGMWRAINELMLVRWDREKPASV 420
           +YGT+ +V+VDVEEVM++ KELWHGRSAR+++AKDVGRGMWRA+NELMLVRWD +KPA+V
Sbjct: 361 VYGTSAEVEVDVEEVMYIVKELWHGRSARDETAKDVGRGMWRAMNELMLVRWDAKKPATV 420

Query: 421 DNLILLKFKEADEHESTTLDDIKEKEPEFFMRVTAILKRAEIEF 463
            NL+LLKFKEADEHE+ TL+++KE E EFF RV+ +LK+AE++F
Sbjct: 421 SNLVLLKFKEADEHETKTLEEVKESETEFFERVSCVLKKAELDF 455

[Close]

BLAST of Sed0005203 vs. TAIR 10
Match: AT5G55130.1 (co-factor for nitrate, reductase and xanthine dehydrogenase 5 )

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-12
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 90  FGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRA 149
           F +  Q N+  S V+VIG GG+GS A + L   GVG+L ++D D V L++++R  + T A
Sbjct: 81  FAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDHDVVELNNMHRQIIHTEA 140

Query: 150 DVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLL 209
            +G PK +       SI    +V+  V     ++  EILS + D ++D  DN  ++  + 
Sbjct: 141 FIGHPKVKSAAAACRSINSTIKVDEYVEALRTSNALEILS-QYDIIVDATDNPPSRYMIS 200

Query: 210 AACVRRGLKVLSATGAGARADPT 233
             CV  G  ++S    G     T
Sbjct: 201 DCCVLLGKPLVSGAALGMEGQLT 222

[Close]

BLAST of Sed0005203 vs. TAIR 10
Match: AT1G05350.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-09
Identity = 41/126 (32.54%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 103 VVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRAD-VGVPKAQCLKE 162
           V ++G+GGVGS AA ML R G+GRLLL D+D V L+++NR  +  R D VG+ K     +
Sbjct: 85  VAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNR--LFFRPDQVGMTKTDAAVQ 144

Query: 163 HFLSIFPECQVEAKVLLYDATSEEEILSGK---------------PDFVLDCIDNIDTKV 213
               I P+  +E+  +        E  +                  D VL C+DN + ++
Sbjct: 145 TLAEINPDVVLESFTMNITTVQGFETFTSSLTNKSFCPSKEGGSGVDLVLSCVDNYEARM 204

The following BLAST results are available for this feature:

BLAST of Sed0005203 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893153.1	3.1e-240	92.89	tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Benincasa hispida]	[more]
XP_008438196.1	1.3e-238	92.03	PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo]...	[more]
XP_008438195.1	1.6e-236	90.66	PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucumis melo]	[more]
XP_023538843.1	4.7e-236	91.16	tRNA threonylcarbamoyladenosine dehydratase [Cucurbita pepo subsp. pepo]	[more]
XP_022932713.1	8.0e-236	91.56	tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0005203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13861	3.1e-65	38.90	tRNA threonylcarbamoyladenosine dehydratase OS=Schizosaccharomyces pombe (strain...	[more]
P36101	1.4e-62	37.60	tRNA threonylcarbamoyladenosine dehydratase 2 OS=Saccharomyces cerevisiae (strai...	[more]
P38756	1.4e-46	30.79	tRNA threonylcarbamoyladenosine dehydratase 1 OS=Saccharomyces cerevisiae (strai...	[more]
O32037	9.1e-33	39.90	tRNA threonylcarbamoyladenosine dehydratase OS=Bacillus subtilis (strain 168) OX...	[more]
Q57097	7.5e-27	37.21	tRNA threonylcarbamoyladenosine dehydratase OS=Haemophilus influenzae (strain AT...	[more]

BLAST of Sed0005203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3C0	6.4e-239	92.03	tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo var. maku...	[more]
A0A1S3AWE8	6.4e-239	92.03	tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3AWF9	7.8e-237	90.66	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1F2I9	3.9e-236	91.56	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1I7L9	5.1e-236	91.16	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita maxima OX=36...	[more]

BLAST of Sed0005203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37530.2	3.0e-196	75.16	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G37530.1	1.9e-195	75.22	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G55130.1	3.1e-12	32.17	co-factor for nitrate, reductase and xanthine dehydrogenase 5	[more]
AT1G05350.1	1.1e-09	32.54	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000594	THIF-type NAD/FAD binding fold	PFAM	PF00899	ThiF	coord: 84..332 e-value: 1.1E-39 score: 136.3
None	No IPR available	GENE3D	3.40.50.720		coord: 73..335 e-value: 7.7E-68 score: 230.8
None	No IPR available	PANTHER	PTHR43267	TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE	coord: 9..462
None	No IPR available	PANTHER	PTHR43267:SF2	TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED	coord: 9..462
None	No IPR available	CDD	cd00755	YgdL_like	coord: 109..324 e-value: 1.74701E-89 score: 270.245
IPR035985	Ubiquitin-activating enzyme	SUPERFAMILY	69572	Activating enzymes of the ubiquitin-like proteins	coord: 80..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005203.1	Sed0005203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061504	cyclic threonylcarbamoyladenosine biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061503	tRNA threonylcarbamoyladenosine dehydratase
molecular_function	GO:0008641	ubiquitin-like modifier activating enzyme activity