Sed0005201 (gene) Chayote v1

Overview
NameSed0005201
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG08: 40329672 .. 40330582 (-)
RNA-Seq ExpressionSed0005201
SyntenySed0005201
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTGTCTCAACGGTCAAAGGCCGAAGGATTCCCCTTCTTTTCTTTTGTAATGAGGTGAGTGGTTCCTTGGTTAGAAGGTGGATCCTTAGGAGCTTTTGTGATGGTGGCATGCATCGTGTTGTTGAGATGCAGGGCTATCTATTGTGGAACGTTCAAAGATGGCGATCAGGCTCGGTCAAAAAGGAATCGAATAAGGATCTTTGTTCCGTTTGATAGGGGAAAGTTAGGTAAGAAGAAAAGGAAGAAAAGAAAGAGGGAGCAAGGCATGGAAAGAGAGATTCAGAGGATGAGGAAGAAAAGTCTAGACGAAAAGGCGAGCTCCGTCAAGAATTCCGGTGAATGCGTGTCTAAGAGGGTTAAACTGTGGAAAGGGACACCTGCCCCAATTGAGCTGACAAGTGTGCGACTTGAGCTGAAAAGACGTGGCCATCTTGTAGGGGTCAGAGTGGGCAGTAAGGGCGTGAGTTGGCAGGTCGGGTGGAACTCAAGCCTGATCTTTAGATCTGATTCTTTCGGGTCGGGTTAAATCTAATCCGTTGTTCGAATTTTGACCCGAACTGAGTACCCACTTCTCTGATCCAGTCTAGAATGTCTTTGCAGCTTAGTAGTTTTTTTTTTATCTATTCTTCTCACTGGTTCTGATTTTTTTGTCGACTACGAAGGAGTCTGAACTAGTGGATAAAGGAAGATTGTGGAGGTTGTTCATAGGGTCTTGCCAAGATTTGAGAAGCTCCTTTTTTGGAGTGTCTCTCTTCTTTTTAGCTTTGGTGGGGGCGCGACGCGTTCTTCAGTCATGGAAATGATTTTCGGATTTCACCCCAAAGCATTTCAGAAGTCTACCAGGTGGCTAGGGACGATGGTTATTGGCTCTCAACGGTGGGTCTGAGTGAGGTTCTCGCGCTTTGA

mRNA sequence

ATGGGAGTGTCTCAACGGTCAAAGGCCGAAGGATTCCCCTTCTTTTCTTTTGTAATGAGGGCTATCTATTGTGGAACGTTCAAAGATGGCGATCAGGCTCGGTCAAAAAGGAATCGAATAAGGATCTTTGTTCCGTTTGATAGGGGAAAGTTAGGTAAGAAGAAAAGGAAGAAAAGAAAGAGGGAGCAAGGCATGGAAAGAGAGATTCAGAGGATGAGGAAGAAAAGTCTAGACGAAAAGGCGAGCTCCGTCAAGAATTCCGGTGAATGCGTGTCTAAGAGGGTTAAACTGTGGAAAGGGACACCTGCCCCAATTGAGCTGACAAGTGTGCGACTTGAGCTGAAAAGACGTGGCCATCTTGTAGGGGTCAGAGTGGGCAGTAAGGGCGTGAGTTGGCAGCTTTGGTGGGGGCGCGACGCGTTCTTCAGTCATGGAAATGATTTTCGGATTTCACCCCAAAGCATTTCAGAAGTCTACCAGGTGGCTAGGGACGATGGTTATTGGCTCTCAACGGTGGGTCTGAGTGAGGTTCTCGCGCTTTGA

Coding sequence (CDS)

ATGGGAGTGTCTCAACGGTCAAAGGCCGAAGGATTCCCCTTCTTTTCTTTTGTAATGAGGGCTATCTATTGTGGAACGTTCAAAGATGGCGATCAGGCTCGGTCAAAAAGGAATCGAATAAGGATCTTTGTTCCGTTTGATAGGGGAAAGTTAGGTAAGAAGAAAAGGAAGAAAAGAAAGAGGGAGCAAGGCATGGAAAGAGAGATTCAGAGGATGAGGAAGAAAAGTCTAGACGAAAAGGCGAGCTCCGTCAAGAATTCCGGTGAATGCGTGTCTAAGAGGGTTAAACTGTGGAAAGGGACACCTGCCCCAATTGAGCTGACAAGTGTGCGACTTGAGCTGAAAAGACGTGGCCATCTTGTAGGGGTCAGAGTGGGCAGTAAGGGCGTGAGTTGGCAGCTTTGGTGGGGGCGCGACGCGTTCTTCAGTCATGGAAATGATTTTCGGATTTCACCCCAAAGCATTTCAGAAGTCTACCAGGTGGCTAGGGACGATGGTTATTGGCTCTCAACGGTGGGTCTGAGTGAGGTTCTCGCGCTTTGA

Protein sequence

MGVSQRSKAEGFPFFSFVMRAIYCGTFKDGDQARSKRNRIRIFVPFDRGKLGKKKRKKRKREQGMEREIQRMRKKSLDEKASSVKNSGECVSKRVKLWKGTPAPIELTSVRLELKRRGHLVGVRVGSKGVSWQLWWGRDAFFSHGNDFRISPQSISEVYQVARDDGYWLSTVGLSEVLAL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005201.1Sed0005201.1mRNA