Sed0005180 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACAAGAGTGGACAGAACAGAACAGAACACAACAGAAGAAGAAGAAAGGAAGCAAAGAAAGAAGAAGAGTCAATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCCGAAGAAGCGGCGAAGAAATCCCAAACCCTAACGTCGACCACCGCACTCACCGATTTGGTCACCGAAACCGCCAAAAAGTCGAAGGAACTCGCCGCCGAAGCCTCCAAGACGGCGGATCTCATCAAAACCGCCGCCATCAAGCAGGCCGACAACCTCAAATCACTCAGCGTCTCCGGCATTATGCCTCCCCAACTCCCATCCATTTCCATCCCCAGCTTCGCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAAACGTTTGGCCTCAATGGCGATCTGAGAGAGTTCGTCAGGGGATTCACTTCCACTACTTTCAAGAACTTTCCGATTCAAGGTAGGAATGGATTTGGATTTGGACTTGGATTTGAAATTGTTTGAGCTGTGTAATTGATGCGGATTGTTTTGGTGATTTGTTGTAGATGGATCCGAGGCGTCTGATGTTGCGGTCACGGCTTCGAATGTGCGCAAGGATCTGACGGAATGGCAGGAACTGCACGCTACGCTGGTTCTTACCAACGTCAAGGTGAGATCTAATGTTGTAATTCCTTGTAGTTTTAGTTGATTTTGATTAAATCATGCACCATTTTGTCAGGAGTTTCTTGTTTCCCAATGATTTAGGTTCTTTGATTTGGAATTGTTTAGAATAGAAACAAAATTTCATAGATGATTGAAAAAAGTACAGTTGAACAGGTGGGAAGGAACCAAGTAGTTCAATTCGACTGAATCACGATTAGGCTGTAAATTTGGTTTTGGTTTTCTGTACATTGATTCCCTAAATTTGATTCTAAACTCCATTTGCATCATTGGATTCGACGGCAGTTTACGCGAACTTAAAACGAAGGATCTCTTGTTACTTTCAAAAGCTAAAGTTGGATGTAATTTTCAAAACCATAAATCTGACGTCCAGCCCTTTTTTTTTGCATATTTAATTTATGATGTGGTCTCCCACATGCTAAACAAAAATGGATCTCAATTTCTTTATCTGAGAACTTGAGCTAGAAGCAAGTATTAGGTAGAAGCATATGAAAAAAAGAATCTAAACCATGATAACACCTCAACTTTTGTTGCCTTTACATTTTTTGGTGATCTTCATTTCTCTCATATCAAATTGTTAAAATAAAGCATCTCATTTCATCCATATATATTGTTTATAGCGTCCATAAGTTTGCTGAATTGGGCAGATACAATTGCTTAATGCTTGTTCCTTACTTACCAATCAATTAACGGGTGCCAACTGGTATTGTCTTAAGATATAATTCTTGCCTGTTGTAAAGCCTAAAGCTTGAAAGGCTATTTCAAGAATTTAGATGCTGTTGACATCTTAGATGATGCGTAAATCACGATAGGTTACACCCAGAAGATCCACCTGAATTCTACACTTGATTGATCTGTTAATTCAAAGTTGATAACCTTTGTCCTATTTCATCAGCTAGAGTAGATCATCGTCTTTTCATATGTCCCTTGACCTGATTGCCTTAATTGAATCTTCTTTTCATCCAAAAGACAATTTGAATGATGCCCCTATTTGTTATTTCTTTTGCAGGAGATTTCAAGGTTAAGATATGAGCTATGTCCAAGAATTATGAAAGAAAGAATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGCTCCGTAAGTTGCTTTTTTTTTTAAAAAAATAATAATTATTGAAGCTTCTTCTATCTGATCTTGATTCTTGAGACCAGTTTTGAATGTTTAGCTGTTTCTTATTGTAAGTTCTGAGAAATATGTCACCACATGCTGAGCATCTAATAGTGCGGTCACCAGTATGGAAAAATAGTATATAATACGTTATTTATTTACTTACTTCCTACTTCATCATTATTTATTTACCCTCTTCAATGTGACCGAATTATTTTTTTGAAACAAGGATAGCCACACCCGTCCCTAGGCCAGACACATGAGACATCGAAGGAGTGTTGTCACAAGTGAATCTCGAACCTAAGACCTTGAGGGGAGCATACCCTCAAAATCCAAGTCTTCAACCACTGCGCCACTCCTTGGGGACAATGTGACCGACTTATTTAAGCATCTGGTTTCTGGTTTCTGTTGACTGTATACAACATATATAATACGTTTTTTTTTCACATTAGATTAGTATATTTGCTGGTGTAAGAATTTTTAGGAATTATGAAACTCAAGCTATTTAGATACCTGACGCAATATACCATTTAGAATAAGTATCTCATTGGCGAATGAATGGTTGTATGGTTGCTGTATGAAAATTCATTTTTTTATCATCAAAAGATTCTGTCTTGGTAGTATGCCCCCTAATGGTTAAAAACTTAAAAACACAGATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAAAAAAGCTGATGAAGCCAAGCAAACTTCATCGGTTGGAGCCTCTGAAAAAGTTGAAGGGTCAGAAAAGAACCTGATGGGTAGAACTTCCCAATCGTCGTCCGCTGACCAAGACTTAGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGAGGAGATGCAGGTAAATCATCTTGATTCTTACAATCCTTCCACCAAAATTAAATCTATTTTTTAGTCTCATGGGAGGTCCTTGAAGTTGGCGGACTCAATTATAGATGTATTGTCCTCGAGTGGTGGCGTAGTTAGTCGAAAGCTTGGGCTTTTGAGGGTATGCTCCTCTTGAGTTTCCAAATTCGAGACCTGCTTGTGACATTAATTTGTAGACATCTTTAATTGTGTCTCCACTCTTTTAATATATCCCAATGTCACAGTCTAGAGATGGGTCAGTGGTGCCCCCAGTTTTAGCTTTAGATTTCCTGGTTATCAAAAAAGAAAAAAAATTATAGATGCACTTATCATCTTATAGCACATGTTAAGTGCAGAATGGTCAAAAACTAATTCTTGTCCTGTTAAAATTGCCTGCCCCTTCTAAACTTGTATCTATGCTGGTTGTCAACTTTTTTTCCAGATGAGGGTGATGAAAGCTTCGATGACGACTTCGACAAGATCGAAAACTCGGTATGTTTATGTTTCTCTTTTACTCTTCCCATATAGCGTGTCAGCGTTTCACTGTTAATAATAACATACACAAGAGAACTATATAATGCCCAACCAACTATTGAACCAAAAAGTTGTAAAATTCCTTGTTGTCATTAGGTCTTAGCCTTTCGAGAGACTTAGTCTCTCTCAAATCTTCACCAAGACTATACCAAAATATTCACTTCCCACAAAGAACTATAACTTCTCTATTTGTCCAAGACATTAAGTACTAGTTACTACTCTACCCTTATGAATATAATACTAATATTCCCCTAACCTCAGTACTCTATTTGTTTGACATATTTAGGTAGGATTTAGTTTTAGGATTTATTAACTCCTCGAAAATCTACATTCAAACGAGTTTTTATTAACTCTTTCTCATTTTTACTTTTAAAAATAACTCTCATTTTTAACTATTCATTTATAACTACTCAATCATTTTTAACCACTCATTTTTAATCATTCATTTCAAATCAATCAAAATAACTCATTTTTAACCTTTCATTTTTAATCATTTCTGTTTTAGCTACTAAAAATAACTACTCCTTTTAAATCTACATCAAAACAAGGTTTTGACTCTAACTCTTCTACACAAAAACTACTTCCAAACGAGTTTTTGACACAATTCTCAATTTTTAACTATTCAATATAACTCAACCTAAATCCTACCTACCTAAATATGTCAAACAAACACAGCCCCTAACAGCCAGGTTCTAATCCAAAAACTGATTCTGCAAACTTCATGGATGCTTGTAGGATGCCGAAGAAGAAGAAGACGACAAGGCGAAAGCCGCAACAAGTTAGAACATAAAAAAACACATTAAGAAGAAGAAGATGCAACGTGAGATGGGGATTTGGGTGCCATGACAGAAAGAAGAACGGGGTGTTGAGAAGAAAGTGGCATTGAAGATTTATATACCATATTTTGAAGTATTGCAGGTGCAGGCTGTTTCATTACCAAAAATAAGAAAAAAGAACATTGTCGTTTCTAGTAAATTTTACTCCGTTGTCGATTCTAATCCCAATTGTACAAACAACACTGTCATTAGTAATGGGGATGTACAGAATCTATAGAGATCAATTTGTCAAATTGTTTCAAGGGATGATCTTATAGGTTTGAGCTTGTATAAGGTAAGTTTTTTTTTTTTTTTCATAACAAAAGTTTGTTCTTAGGCAGGTGGTTTTGATTTCCTAATTAAAGGGTTTTTAGTTTTTTTTCGATTT TAAACAAGAGTGGACAGAACAGAACAGAACACAACAGAAGAAGAAGAAAGGAAGCAAAGAAAGAAGAAGAGTCAATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCCGAAGAAGCGGCGAAGAAATCCCAAACCCTAACGTCGACCACCGCACTCACCGATTTGGTCACCGAAACCGCCAAAAAGTCGAAGGAACTCGCCGCCGAAGCCTCCAAGACGGCGGATCTCATCAAAACCGCCGCCATCAAGCAGGCCGACAACCTCAAATCACTCAGCGTCTCCGGCATTATGCCTCCCCAACTCCCATCCATTTCCATCCCCAGCTTCGCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAAACGTTTGGCCTCAATGGCGATCTGAGAGAGTTCGTCAGGGGATTCACTTCCACTACTTTCAAGAACTTTCCGATTCAAGATGGATCCGAGGCGTCTGATGTTGCGGTCACGGCTTCGAATGTGCGCAAGGATCTGACGGAATGGCAGGAACTGCACGCTACGCTGGTTCTTACCAACGTCAAGGAGATTTCAAGGTTAAGATATGAGCTATGTCCAAGAATTATGAAAGAAAGAATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGCTCCATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAAAAAAGCTGATGAAGCCAAGCAAACTTCATCGGTTGGAGCCTCTGAAAAAGTTGAAGGGTCAGAAAAGAACCTGATGGGTAGAACTTCCCAATCGTCGTCCGCTGACCAAGACTTAGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGAGGAGATGCAGATGAGGGTGATGAAAGCTTCGATGACGACTTCGACAAGATCGAAAACTCGGATGCCGAAGAAGAAGAAGACGACAAGGCGAAAGCCGCAACAAGTTAGAACATAAAAAAACACATTAAGAAGAAGAAGATGCAACGTGAGATGGGGATTTGGGTGCCATGACAGAAAGAAGAACGGGGTGTTGAGAAGAAAGTGGCATTGAAGATTTATATACCATATTTTGAAGTATTGCAGGTGCAGGCTGTTTCATTACCAAAAATAAGAAAAAAGAACATTGTCGTTTCTAGTAAATTTTACTCCGTTGTCGATTCTAATCCCAATTGTACAAACAACACTGTCATTAGTAATGGGGATGTACAGAATCTATAGAGATCAATTTGTCAAATTGTTTCAAGGGATGATCTTATAGGTTTGAGCTTGTATAAGGTAAGTTTTTTTTTTTTTTTCATAACAAAAGTTTGTTCTTAGGCAGGTGGTTTTGATTTCCTAATTAAAGGGTTTTTAGTTTTTTTTCGATTT ATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCCGAAGAAGCGGCGAAGAAATCCCAAACCCTAACGTCGACCACCGCACTCACCGATTTGGTCACCGAAACCGCCAAAAAGTCGAAGGAACTCGCCGCCGAAGCCTCCAAGACGGCGGATCTCATCAAAACCGCCGCCATCAAGCAGGCCGACAACCTCAAATCACTCAGCGTCTCCGGCATTATGCCTCCCCAACTCCCATCCATTTCCATCCCCAGCTTCGCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAAACGTTTGGCCTCAATGGCGATCTGAGAGAGTTCGTCAGGGGATTCACTTCCACTACTTTCAAGAACTTTCCGATTCAAGATGGATCCGAGGCGTCTGATGTTGCGGTCACGGCTTCGAATGTGCGCAAGGATCTGACGGAATGGCAGGAACTGCACGCTACGCTGGTTCTTACCAACGTCAAGGAGATTTCAAGGTTAAGATATGAGCTATGTCCAAGAATTATGAAAGAAAGAATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGCTCCATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAAAAAAGCTGATGAAGCCAAGCAAACTTCATCGGTTGGAGCCTCTGAAAAAGTTGAAGGGTCAGAAAAGAACCTGATGGGTAGAACTTCCCAATCGTCGTCCGCTGACCAAGACTTAGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGAGGAGATGCAGATGAGGGTGATGAAAGCTTCGATGACGACTTCGACAAGATCGAAAACTCGGATGCCGAAGAAGAAGAAGACGACAAGGCGAAAGCCGCAACAAGTTAG MEDLWKRAKSFAEEAAKKSQTLTSTTALTDLVTETAKKSKELAAEASKTADLIKTAAIKQADNLKSLSVSGIMPPQLPSISIPSFAAPSPHSQSELETFGLNGDLREFVRGFTSTTFKNFPIQDGSEASDVAVTASNVRKDLTEWQELHATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVAPYEKKYMEEIKLKSEEQKKADEAKQTSSVGASEKVEGSEKNLMGRTSQSSSADQDLDTFLLGDLEDSDGGDADEGDESFDDDFDKIENSDAEEEEDDKAKAATS Homology
BLAST of Sed0005180 vs. NCBI nr
Match: XP_022944919.1 (uncharacterized protein LOC111449307 [Cucurbita moschata]) HSP 1 Score: 457.2 bits (1175), Expect = 1.1e-124 Identity = 256/290 (88.28%), Postives = 270/290 (93.10%), Query Frame = 0
BLAST of Sed0005180 vs. NCBI nr
Match: XP_038893418.1 (uncharacterized protein LOC120082213 [Benincasa hispida]) HSP 1 Score: 456.4 bits (1173), Expect = 1.8e-124 Identity = 257/294 (87.41%), Postives = 270/294 (91.84%), Query Frame = 0
BLAST of Sed0005180 vs. NCBI nr
Match: KAG6574029.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 455.7 bits (1171), Expect = 3.1e-124 Identity = 255/290 (87.93%), Postives = 269/290 (92.76%), Query Frame = 0
BLAST of Sed0005180 vs. NCBI nr
Match: XP_023542843.1 (uncharacterized protein LOC111802641 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.7 bits (1171), Expect = 3.1e-124 Identity = 256/290 (88.28%), Postives = 269/290 (92.76%), Query Frame = 0
BLAST of Sed0005180 vs. NCBI nr
Match: XP_022968483.1 (uncharacterized protein LOC111467710 [Cucurbita maxima]) HSP 1 Score: 454.5 bits (1168), Expect = 6.8e-124 Identity = 255/290 (87.93%), Postives = 268/290 (92.41%), Query Frame = 0
BLAST of Sed0005180 vs. ExPASy TrEMBL
Match: A0A6J1FZH6 (uncharacterized protein LOC111449307 OS=Cucurbita moschata OX=3662 GN=LOC111449307 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 5.1e-125 Identity = 256/290 (88.28%), Postives = 270/290 (93.10%), Query Frame = 0
BLAST of Sed0005180 vs. ExPASy TrEMBL
Match: A0A6J1HY52 (uncharacterized protein LOC111467710 OS=Cucurbita maxima OX=3661 GN=LOC111467710 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 3.3e-124 Identity = 255/290 (87.93%), Postives = 268/290 (92.41%), Query Frame = 0
BLAST of Sed0005180 vs. ExPASy TrEMBL
Match: A0A6J1D4M8 (uncharacterized protein LOC111017557 OS=Momordica charantia OX=3673 GN=LOC111017557 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121 Identity = 246/293 (83.96%), Postives = 266/293 (90.78%), Query Frame = 0
BLAST of Sed0005180 vs. ExPASy TrEMBL
Match: A0A6J1H1M5 (uncharacterized protein LOC111458760 OS=Cucurbita moschata OX=3662 GN=LOC111458760 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.9e-121 Identity = 251/294 (85.37%), Postives = 270/294 (91.84%), Query Frame = 0
BLAST of Sed0005180 vs. ExPASy TrEMBL
Match: A0A6J1IPK1 (uncharacterized protein LOC111477659 OS=Cucurbita maxima OX=3661 GN=LOC111477659 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.9e-120 Identity = 251/294 (85.37%), Postives = 269/294 (91.50%), Query Frame = 0
BLAST of Sed0005180 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein ) HSP 1 Score: 269.6 bits (688), Expect = 2.9e-72 Identity = 180/325 (55.38%), Postives = 222/325 (68.31%), Query Frame = 0
BLAST of Sed0005180 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71 Identity = 175/325 (53.85%), Postives = 216/325 (66.46%), Query Frame = 0
BLAST of Sed0005180 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51 Identity = 121/222 (54.50%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of Sed0005180 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein ) HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21 Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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