Sed0005169 (gene) Chayote v1

Overview


Name	Sed0005169
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SOB FIVE-LIKE 3-like
Location	LG12: 31227198 .. 31228563 (-)
RNA-Seq Expression	Sed0005169
Synteny	Sed0005169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGTTTTGTAGCCCTAGAGCCAATCCCAATCCATCTCTCTGCATTTAAAGCTACATTTTCCAATTATGACAGAATGCAGAAAAGAGTTAAGATGATTGCCATCATCTAAGGAACCCAATGGCCAAATGAACCAACCCCATGTCCTTTCAAATTCAAGAAACTAAAGCATGTATGCCTTTTGCAATAAGAAGGATTTCCTTTTCATTGACACTTTCTAGCTGTCTTCTGCTCAGTGAAAGTCAGAGAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAAGGTTTTTATCACTTTTTTCTTTTACTCGTAACCAGGAATCGGAGTTTCGTCCCACTACATACTCGGAGCCACCCGTGCCCGTCTCAAGACCCTGACTCAAAAGACAGACAGAGACTTTACAATTAAACTCACTTGTAAATTTCGAACTTTACCGTAGAGACCCCTAGTCGCCCCTTGAGTAGATGAAGGTTTTTATCTAGCCATTAAGAACTTGTTTCTTACTTTTTTTTCTTCCTTTTTTCAAAAATTGGGTTTTGTAGCTTTCATATTATTAGAGAAGCCTGTTTGGGTCAGAGAGGTAGCTAGCAAAAGGGCATGAATGGTTTCCTCAGGTGTCTAAATACACCTTCCCTATCTGCCTCATTCAAGAAACTTCCCCAAATTCTGTTATTGATTCTTCTTTTTCTTCTCCTTTAGTGTTTCTTAGTTTCTTTCTTAAACTCCTCAAAAACATTACTTGTACTAATTCATGGAGCCTTACCAAGTTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCACCTGTTGATGGTTCCAGTGATGCACCTTCTGATGAAAATCAAGATCATGAAGATGGAAAAAACAAAGGATTTTATGGAACTGATACAAATCTTCAAAATGACAGTGATGACTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGATTTGGAAGAAATGGGAGGATGAAGAATAATCACAATGAGGTAAATTTAGGCTTGGAAAGCAAAACCAAGAAGCCATTAATGGAGAAGCAAAGAGCTGACAGAAAGGAAGTGAAAGAGAAGTTGGGTTTGGTGGGGCAAAAGCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGTAAGAAATAGCATTTGGATGGGCAAAAGAAACTAGCCAAGCTGGTTTCTTCTTTCTTTTGTTTCTCTGTTTTTTTTTTCCTTTTCATTTATGCTTTCTTGTAGGCTGAAACTTAACCGAATGTTTGTGCGTGTTTGGACACCGGTTGGATTATTATAAATTGTATTTGGAATGCAGGTTATTATAACACGAGTTATGAGTGTTTGGC

mRNA sequence

CTAGTTTTGTAGCCCTAGAGCCAATCCCAATCCATCTCTCTGCATTTAAAGCTACATTTTCCAATTATGACAGAATGCAGAAAAGAGTTAAGATGATTGCCATCATCTAAGGAACCCAATGGCCAAATGAACCAACCCCATGTCCTTTCAAATTCAAGAAACTAAAGCATGTATGCCTTTTGCAATAAGAAGGATTTCCTTTTCATTGACACTTTCTAGCTGTCTTCTGCTCAGTGAAAGTCAGAGAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAAGGTTTTTATCACTTTTTTCTTTTACTCGTAACCAGGAATCGGAGTTTCGTCCCACTACATACTCGGAGCCACCCGTGCCCGTCTCAAGACCCTGACTCAAAAGACAGACAGAGACTTTACAATTAAACTCACTTGTAAATTTCGAACTTTACCGTAGAGACCCCTAGTCGCCCCTTGAGTAGATGAAGGTTTTTATCTAGCCATTAAGAACTTGTTTCTTACTTTTTTTTCTTCCTTTTTTCAAAAATTGGGTTTTGTAGCTTTCATATTATTAGAGAAGCCTGTTTGGGTCAGAGAGGTAGCTAGCAAAAGGGCATGAATGGTTTCCTCAGGTGTCTAAATACACCTTCCCTATCTGCCTCATTCAAGAAACTTCCCCAAATTCTGTTATTGATTCTTCTTTTTCTTCTCCTTTAGTGTTTCTTAGTTTCTTTCTTAAACTCCTCAAAAACATTACTTGTACTAATTCATGGAGCCTTACCAAGTTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCACCTGTTGATGGTTCCAGTGATGCACCTTCTGATGAAAATCAAGATCATGAAGATGGAAAAAACAAAGGATTTTATGGAACTGATACAAATCTTCAAAATGACAGTGATGACTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGATTTGGAAGAAATGGGAGGATGAAGAATAATCACAATGAGGTAAATTTAGGCTTGGAAAGCAAAACCAAGAAGCCATTAATGGAGAAGCAAAGAGCTGACAGAAAGGAAGTGAAAGAGAAGTTGGGTTTGGTGGGGCAAAAGCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGTAAGAAATAGCATTTGGATGGGCAAAAGAAACTAGCCAAGCTGGTTTCTTCTTTCTTTTGTTTCTCTGTTTTTTTTTTCCTTTTCATTTATGCTTTCTTGTAGGCTGAAACTTAACCGAATGTTTGTGCGTGTTTGGACACCGGTTGGATTATTATAAATTGTATTTGGAATGCAGGTTATTATAACACGAGTTATGAGTGTTTGGC

Coding sequence (CDS)

ATGGAGCCTTACCAAGTTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCACCTGTTGATGGTTCCAGTGATGCACCTTCTGATGAAAATCAAGATCATGAAGATGGAAAAAACAAAGGATTTTATGGAACTGATACAAATCTTCAAAATGACAGTGATGACTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGATTTGGAAGAAATGGGAGGATGAAGAATAATCACAATGAGGTAAATTTAGGCTTGGAAAGCAAAACCAAGAAGCCATTAATGGAGAAGCAAAGAGCTGACAGAAAGGAAGTGAAAGAGAAGTTGGGTTTGGTGGGGCAAAAGCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGTAAGAAATAGCATTTGGATGGGCAAAAGAAACTAG

Protein sequence

MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQNDSDDSMASDASSGPSHQQGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEKLGLVGQKPKSSVQSSSKVRNSIWMGKRN

Homology

[Close]

BLAST of Sed0005169 vs. NCBI nr
Match: XP_022135291.1 (uncharacterized protein LOC111007289 isoform X1 [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40
Identity = 106/159 (66.67%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDG----KNKGFYGTDTN 60
           MEP Q+FGV+EECHSSESGWTMYIGSP  GSSDA +D     +DG    +++  YG   N
Sbjct: 1   MEPSQIFGVAEECHSSESGWTMYIGSPAGGSSDADADAAPSGDDGEDEDEDEDCYG---N 60

Query: 61  LQNDSDDSMASDASSGPSHQQG--FGRNGRMKN-------NHNEVNLGLESKTKKPLMEK 120
            Q++SDDSMASDASSGPSHQ G  FG NGR+KN         +EV    E+KTKKPLMEK
Sbjct: 61  NQDESDDSMASDASSGPSHQVGHPFGGNGRVKNPNPHGLKQQSEVKFCFETKTKKPLMEK 120

Query: 121 QRADRKEVKEKLGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           QRA+RKEVKEKL LVGQKPK+SVQSSSKVR SIWMGK+N
Sbjct: 121 QRAERKEVKEKLVLVGQKPKTSVQSSSKVRKSIWMGKKN 156

[Close]

BLAST of Sed0005169 vs. NCBI nr
Match: XP_022135292.1 (uncharacterized protein LOC111007289 isoform X2 [Momordica charantia])

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-36
Identity = 100/150 (66.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 10  SEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDG----KNKGFYGTDTNLQNDSDDSM 69
           SEECHSSESGWTMYIGSP  GSSDA +D     +DG    +++  YG   N Q++SDDSM
Sbjct: 4   SEECHSSESGWTMYIGSPAGGSSDADADAAPSGDDGEDEDEDEDCYG---NNQDESDDSM 63

Query: 70  ASDASSGPSHQQG--FGRNGRMKN-------NHNEVNLGLESKTKKPLMEKQRADRKEVK 129
           ASDASSGPSHQ G  FG NGR+KN         +EV    E+KTKKPLMEKQRA+RKEVK
Sbjct: 64  ASDASSGPSHQVGHPFGGNGRVKNPNPHGLKQQSEVKFCFETKTKKPLMEKQRAERKEVK 123

Query: 130 EKLGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           EKL LVGQKPK+SVQSSSKVR SIWMGK+N
Sbjct: 124 EKLVLVGQKPKTSVQSSSKVRKSIWMGKKN 150

[Close]

BLAST of Sed0005169 vs. NCBI nr
Match: XP_038879181.1 (protein SOB FIVE-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-36
Identity = 97/148 (65.54%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
           MEP Q+FGVSEECHSSESGWTMYIGSPV+GSSDA SD+++D E   +K +Y    N  + 
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPVNGSSDAASDDDEDEE---HKSYYYATNNQDDS 60

Query: 61  SDDSMASDASSGPSHQQGFGRNGRMKNNHNEVNLGLESKTKKPLME--KQRADRKEVKEK 120
            DDSMASDASSGP+H Q       MK+ + E+N  LE+KTKKPLME  KQRA++KEVK  
Sbjct: 61  DDDSMASDASSGPNHHQQGNSFKGMKSPNGEMNFCLETKTKKPLMEKKKQRAEKKEVK-- 120

Query: 121 LGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
              VGQKPKSSVQSSSKVR SI MGKRN
Sbjct: 121 ---VGQKPKSSVQSSSKVRKSILMGKRN 140

[Close]

BLAST of Sed0005169 vs. NCBI nr
Match: XP_022974149.1 (uncharacterized protein LOC111472737 [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 7.8e-36
Identity = 101/148 (68.24%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
           ME  Q  GVSEECHSSESGWTMYIGSPVD SSD   DE+ D E GKNKGF+    N Q+D
Sbjct: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSD--GDEDDDVEYGKNKGFH---ANHQDD 60

Query: 61  SDDSMASDASSGPSHQ--QGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEK 120
           SDDSMASDASSGPSHQ    F  +G MK+             +KPLMEK RA+RKEVK+K
Sbjct: 61  SDDSMASDASSGPSHQPDHPFAGHGSMKH-------------QKPLMEKHRAERKEVKDK 120

Query: 121 LGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           L LVGQKPKSSVQSSSKVR SIWMGKRN
Sbjct: 121 LVLVGQKPKSSVQSSSKVRKSIWMGKRN 130

[Close]

BLAST of Sed0005169 vs. NCBI nr
Match: XP_023531634.1 (uncharacterized protein LOC111793816 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-35
Identity = 101/148 (68.24%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
           ME  Q  GVSEECHSSESGWTMYIGSPVD SSD   DE+ D E GKNKGF+    N Q+D
Sbjct: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSD--GDEDNDVEYGKNKGFH---ANHQDD 60

Query: 61  SDDSMASDASSGPSHQ--QGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEK 120
           SDDSMASDASSGPSHQ    FG +G MK+             +KPL+EK R +RKEVKEK
Sbjct: 61  SDDSMASDASSGPSHQPDHPFGGHGSMKH-------------QKPLIEKHRDERKEVKEK 120

Query: 121 LGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           L LVGQKPKSSVQSSSKVR SIWMGKRN
Sbjct: 121 LVLVGQKPKSSVQSSSKVRKSIWMGKRN 130

[Close]

BLAST of Sed0005169 vs. ExPASy Swiss-Prot
Match: Q9FKQ9 (Protein SOB FIVE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SOFL4 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 11 EECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGT----DTNLQNDSDDSMA 70
          EEC SSESGWT Y+ SP+    D   DE+  +E G N   Y +    +     DSDDSMA
Sbjct: 4  EECSSSESGWTTYLSSPIKVDEDEVVDEDYYYE-GYNIYNYSSKVEHEEERNKDSDDSMA 63

Query: 71 SDASSGPSHQQGFGRNGR--MKNNHNEVN 94
          SDASSGP++Q+   +N    +KN  NE N
Sbjct: 64 SDASSGPNYQRFHQKNKALDLKNGKNEGN 91

[Close]

BLAST of Sed0005169 vs. ExPASy Swiss-Prot
Match: F4J6N7 (Protein SOB FIVE-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SOFL3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.7e-06
Identity = 47/127 (37.01%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 11  EECHSSESGWTMYIGSPVDGSSDAPSDE--NQDHEDGKNKGFYGTDTNLQNDSDDSMASD 70
           EEC SSESGWT YI S ++   +   DE   + H   K++  Y  +  +  DSDDSMASD
Sbjct: 4   EECSSSESGWTTYISSRMEEEEEEVIDEVYYEGHIIEKDRRKYANEYEINKDSDDSMASD 63

Query: 71  ASSGPSHQQGFGRNGRMKNNHNEVNLGLES-KTKKPLMEKQRADRKEVKEKLGLVGQKPK 130
           ASSGPS+ Q   R  R +       L L + K +   +   R D K +   +    +K K
Sbjct: 64  ASSGPSYHQTSNRGKRRE------GLALRNGKGESNDVYSHRIDDKNIGNLISRKKEKKK 123

Query: 131 SSVQSSS 135
           S  +S S
Sbjct: 124 SENKSRS 124

[Close]

BLAST of Sed0005169 vs. ExPASy Swiss-Prot
Match: Q9LEZ1 (Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 1  MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
          ME   +FG  E+C S ESGWTMY+ S             Q H D  +  +YG D   + D
Sbjct: 1  MESANIFGSDEDCRSCESGWTMYLAS-------------QSH-DRDDDCYYGDDDEEEED 60

Query: 61 SD--DSMASDASSGP 74
          SD  DSM SDASSGP
Sbjct: 61 SDGGDSMDSDASSGP 61

[Close]

BLAST of Sed0005169 vs. ExPASy TrEMBL
Match: A0A6J1C092 (uncharacterized protein LOC111007289 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007289 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.1e-41
Identity = 106/159 (66.67%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDG----KNKGFYGTDTN 60
           MEP Q+FGV+EECHSSESGWTMYIGSP  GSSDA +D     +DG    +++  YG   N
Sbjct: 1   MEPSQIFGVAEECHSSESGWTMYIGSPAGGSSDADADAAPSGDDGEDEDEDEDCYG---N 60

Query: 61  LQNDSDDSMASDASSGPSHQQG--FGRNGRMKN-------NHNEVNLGLESKTKKPLMEK 120
            Q++SDDSMASDASSGPSHQ G  FG NGR+KN         +EV    E+KTKKPLMEK
Sbjct: 61  NQDESDDSMASDASSGPSHQVGHPFGGNGRVKNPNPHGLKQQSEVKFCFETKTKKPLMEK 120

Query: 121 QRADRKEVKEKLGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           QRA+RKEVKEKL LVGQKPK+SVQSSSKVR SIWMGK+N
Sbjct: 121 QRAERKEVKEKLVLVGQKPKTSVQSSSKVRKSIWMGKKN 156

[Close]

BLAST of Sed0005169 vs. ExPASy TrEMBL
Match: A0A6J1C2A7 (uncharacterized protein LOC111007289 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007289 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.9e-37
Identity = 100/150 (66.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 10  SEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDG----KNKGFYGTDTNLQNDSDDSM 69
           SEECHSSESGWTMYIGSP  GSSDA +D     +DG    +++  YG   N Q++SDDSM
Sbjct: 4   SEECHSSESGWTMYIGSPAGGSSDADADAAPSGDDGEDEDEDEDCYG---NNQDESDDSM 63

Query: 70  ASDASSGPSHQQG--FGRNGRMKN-------NHNEVNLGLESKTKKPLMEKQRADRKEVK 129
           ASDASSGPSHQ G  FG NGR+KN         +EV    E+KTKKPLMEKQRA+RKEVK
Sbjct: 64  ASDASSGPSHQVGHPFGGNGRVKNPNPHGLKQQSEVKFCFETKTKKPLMEKQRAERKEVK 123

Query: 130 EKLGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           EKL LVGQKPK+SVQSSSKVR SIWMGK+N
Sbjct: 124 EKLVLVGQKPKTSVQSSSKVRKSIWMGKKN 150

[Close]

BLAST of Sed0005169 vs. ExPASy TrEMBL
Match: A0A6J1IGR2 (uncharacterized protein LOC111472737 OS=Cucurbita maxima OX=3661 GN=LOC111472737 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.8e-36
Identity = 101/148 (68.24%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
           ME  Q  GVSEECHSSESGWTMYIGSPVD SSD   DE+ D E GKNKGF+    N Q+D
Sbjct: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSD--GDEDDDVEYGKNKGFH---ANHQDD 60

Query: 61  SDDSMASDASSGPSHQ--QGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEK 120
           SDDSMASDASSGPSHQ    F  +G MK+             +KPLMEK RA+RKEVK+K
Sbjct: 61  SDDSMASDASSGPSHQPDHPFAGHGSMKH-------------QKPLMEKHRAERKEVKDK 120

Query: 121 LGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           L LVGQKPKSSVQSSSKVR SIWMGKRN
Sbjct: 121 LVLVGQKPKSSVQSSSKVRKSIWMGKRN 130

[Close]

BLAST of Sed0005169 vs. ExPASy TrEMBL
Match: A0A6J1F4Z3 (uncharacterized protein LOC111440875 OS=Cucurbita moschata OX=3662 GN=LOC111440875 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.4e-35
Identity = 100/148 (67.57%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
           ME  Q  GVSEECHSSESGWTMYIGSPVD SSD   DE+ D E GKN+ F+    N Q+D
Sbjct: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSD--GDEDNDVEYGKNRVFH---ANHQDD 60

Query: 61  SDDSMASDASSGPSHQ--QGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEK 120
           SDDSMASDASSGPSHQ    FG +G MK+             +KPLMEK RA+RKEVKEK
Sbjct: 61  SDDSMASDASSGPSHQPDHPFGGHGSMKH-------------QKPLMEKHRAERKEVKEK 120

Query: 121 LGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
           L LVGQKPKSS QSSSKVR SIWMGKRN
Sbjct: 121 LVLVGQKPKSSAQSSSKVRKSIWMGKRN 130

[Close]

BLAST of Sed0005169 vs. ExPASy TrEMBL
Match: A0A6J1JBQ3 (uncharacterized protein LOC111485335 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.8e-31
Identity = 98/162 (60.49%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 1   MEPYQVFGVSEECHSSESGWTMYIGSP--VDGSSDAPSDENQDHEDGKNKGFYGTDTNLQ 60
           MEP Q+FGVSEECHSSESGWTMYIGSP   DGSSD  +    D ED ++KG+Y  D N Q
Sbjct: 1   MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEDEEHKGYY--DIN-Q 60

Query: 61  NDSDDSMASDASSGPSHQQGFGRNGRMKN----------NHNEVNLGLES----KTKKPL 120
           +DSDDSMASDASSGPSHQQ     G MKN          + N+ N  LE+    K KKPL
Sbjct: 61  DDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCLETKPKPKPKKPL 120

Query: 121 MEKQRADRKEVKEKLGLVGQKPKSSVQSSSKVRNSIWMGKRN 147
            +KQRA+RKEVKE        PKSSVQSSSK R SIWMGKR+
Sbjct: 121 KKKQRAERKEVKE--------PKSSVQSSSKARKSIWMGKRS 151

[Close]

BLAST of Sed0005169 vs. TAIR 10
Match: AT5G38790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 3.3e-08
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 11 EECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGT----DTNLQNDSDDSMA 70
          EEC SSESGWT Y+ SP+    D   DE+  +E G N   Y +    +     DSDDSMA
Sbjct: 4  EECSSSESGWTTYLSSPIKVDEDEVVDEDYYYE-GYNIYNYSSKVEHEEERNKDSDDSMA 63

Query: 71 SDASSGPSHQQGFGRNGR--MKNNHNEVN 94
          SDASSGP++Q+   +N    +KN  NE N
Sbjct: 64 SDASSGPNYQRFHQKNKALDLKNGKNEGN 91

[Close]

BLAST of Sed0005169 vs. TAIR 10
Match: AT3G30580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38790.1); Has 75 Blast hits to 75 proteins in 16 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 63; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 4.7e-07
Identity = 47/127 (37.01%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 11  EECHSSESGWTMYIGSPVDGSSDAPSDE--NQDHEDGKNKGFYGTDTNLQNDSDDSMASD 70
           EEC SSESGWT YI S ++   +   DE   + H   K++  Y  +  +  DSDDSMASD
Sbjct: 4   EECSSSESGWTTYISSRMEEEEEEVIDEVYYEGHIIEKDRRKYANEYEINKDSDDSMASD 63

Query: 71  ASSGPSHQQGFGRNGRMKNNHNEVNLGLES-KTKKPLMEKQRADRKEVKEKLGLVGQKPK 130
           ASSGPS+ Q   R  R +       L L + K +   +   R D K +   +    +K K
Sbjct: 64  ASSGPSYHQTSNRGKRRE------GLALRNGKGESNDVYSHRIDDKNIGNLISRKKEKKK 123

Query: 131 SSVQSSS 135
           S  +S S
Sbjct: 124 SENKSRS 124

[Close]

BLAST of Sed0005169 vs. TAIR 10
Match: AT5G08150.1 (suppressor of phytochrome b 5 )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 1  MEPYQVFGVSEECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNKGFYGTDTNLQND 60
          ME   +FG  E+C S ESGWTMY+ S             Q H D  +  +YG D   + D
Sbjct: 1  MESANIFGSDEDCRSCESGWTMYLAS-------------QSH-DRDDDCYYGDDDEEEED 60

Query: 61 SD--DSMASDASSGP 74
          SD  DSM SDASSGP
Sbjct: 61 SDGGDSMDSDASSGP 61

[Close]

BLAST of Sed0005169 vs. TAIR 10
Match: AT1G26210.1 (SOB five-like 1 )

HSP 1 Score: 42.4 bits (98), Expect = 3.8e-04
Identity = 46/137 (33.58%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 11  EECHSSESGWTMYIGSPVDGSSDAPSDENQDHEDGKNK----GFYGTDTNLQND-----S 70
           EE  S ESGWTMYI     G+  +    + D +D + K    G+   D +  +D     S
Sbjct: 13  EEYSSCESGWTMYIEDAFHGNDQSSVVVDDDDDDTQVKEADDGYENDDGDTSDDGGDEES 72

Query: 71  DDSMASDASSGPSHQ--QGFGRNGRMKNNHNEVNLGLESKTKKPLMEKQRADRKEVKEKL 130
           DDSMASDASSGPS+Q  +   ++   KN   +V L     T+K +      ++ ++K + 
Sbjct: 73  DDSMASDASSGPSNQLPKHINKHAARKNGSKQVYLQKRQHTEKTI--SNEGEKSDLKAR- 132

Query: 131 GLVGQKPKSSVQSSSKV 137
                   S VQS  KV
Sbjct: 133 --TRTSAASRVQSRGKV 144

The following BLAST results are available for this feature:

BLAST of Sed0005169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135291.1	1.0e-40	66.67	uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]	[more]
XP_022135292.1	2.0e-36	66.67	uncharacterized protein LOC111007289 isoform X2 [Momordica charantia]	[more]
XP_038879181.1	4.6e-36	65.54	protein SOB FIVE-LIKE 3-like [Benincasa hispida]	[more]
XP_022974149.1	7.8e-36	68.24	uncharacterized protein LOC111472737 [Cucurbita maxima]	[more]
XP_023531634.1	1.0e-35	68.24	uncharacterized protein LOC111793816 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0005169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKQ9	4.6e-07	46.07	Protein SOB FIVE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SOFL4 PE=2 SV=1	[more]
F4J6N7	6.7e-06	37.01	Protein SOB FIVE-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SOFL3 PE=2 SV=1	[more]
Q9LEZ1	1.5e-05	45.33	Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE...	[more]

BLAST of Sed0005169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C092	5.1e-41	66.67	uncharacterized protein LOC111007289 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C2A7	9.9e-37	66.67	uncharacterized protein LOC111007289 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IGR2	3.8e-36	68.24	uncharacterized protein LOC111472737 OS=Cucurbita maxima OX=3661 GN=LOC111472737...	[more]
A0A6J1F4Z3	2.4e-35	67.57	uncharacterized protein LOC111440875 OS=Cucurbita moschata OX=3662 GN=LOC1114408...	[more]
A0A6J1JBQ3	4.8e-31	60.49	uncharacterized protein LOC111485335 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0005169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38790.1	3.3e-08	46.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G30580.1	4.7e-07	37.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G08150.1	1.1e-06	45.33	suppressor of phytochrome b 5	[more]
AT1G26210.1	3.8e-04	33.58	SOB five-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..94
None	No IPR available	PANTHER	PTHR33347:SF31	OS08G0486700 PROTEIN	coord: 1..131
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005169.1	Sed0005169.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process