
Sed0005168 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCTTCTATCCAATTACTCCTATGGTGTTGAAAGAATGTCTCCAAATTCTTTCCTGTGTGCTTTGTGTGCTTGCGTAGAACATGAGTGTTTTTTTTAAACAAGGTAACCATGTCCGTCCTTAGCCCAGGCATCGGAGACATCGAAGAAGTAGTATTATAGGTAAGTCTTAAATCTGGAACCTTGAGGGGAGCAAAAGTTCAAGTCTTCAACCAGGGAGGAGAAAACATGAGTGTTTTCTTGTCTCTTGGTTTTGCTTGTCGTAGTGGCTGCCCCTTATGCCAATGTTGTATGGTTTTGCATATGGTGAAGAGTCATAGGGCAATCACTAGAACCTAGCTTTTGGATCGGTTAGCCATCATGATGAATCTCCTTAACATTAATGTGAGAGAAAATGTAAGAGCTCATTGTGATGATGCTGAGTTTTTTTTTGTGAAATTCTTTTATCATCATCCTTTTATCGGTTGATGGATGACCTTTTTTTTTCCTCCATCGCTTATGTGGCCTGCTCTACTTTTTTATCTGATTTTACATGGGATTTCCCCTCACATTTCATAGTTAAGATAAGCCGTGGGTCTTTCTTCACTCTCTTCATCCTCTAGTGTCAAGAGGGATGCCTCTCTATCTTTTCTTTTGTGCTCGATTCATATTTTAATTATAACAACTTTTAAAAAATGTTTTATAGATAACTCGAAAACTATGTTCCCAAGTTTTGTTTAAAAAAAATGACATTTGTAAAATTGTTTTCCCTTTTTATTTTATCTTAGAAAATTTTCCTAAACAACACATTTTACGTATTTAATTCATGAATGAATAATAAATGTTACTTTTTAGATTTGATCTTGTTTACCAAATAACATGTATTCAATTTAGTTTTGAATTAAATTCAAATTATCTCAAGCATCTTACCAATCACCTAATTTACCCATCAACAAAGGATTCATTTTGTCGGGTAATATTTAAACTCAACTCAAACTGATTGACACGTGTTGTTAAAAGCGTAAATTCTTCGGGGCGGATCTTGGCCACGTGAGCCCTCTTTTCCTCTTCCTTTTTTTCACATATAAATCCCAAATCTCCCAAAGTTAGGGTTCATAATTTATATCTCATGGACGCATCTGAAGAACGCAATTCAAATCCAGGTTTGTTCGATCGAATCCTCCCTCCCCGAATCGAAGACGCCGGCCTCGAGGATTGCGCCCTTCCTCCCGATTCCATCACCGAAGCCTTCTTCAAGGCCGCCGCCGCCGTCAAATCCTCCAGGTCCTCTGCCTTCATTTACTCCGACGACGAAGATTCCGACGGACACTGTGTCGAGAAGGAGTTGAAATTGGCGGAGTTTGGTGTAGATGAGGTCGTGGTTGGGGGAATGGAGGAGAGGAGAGGGAAGGGCTGTGTGGTAGATGTTTTGGAAGGTTTGGAGATTGAAGAGGAAGCGAAGAAGAGGAAGAAGAAGAGCGGTGAAGAGGACAAACCTATTCTGGCGGAAGGTTTTGCTTGAGATTCTCAAATTCGATTAAGTACTGTCCAACTCTTTGCTGCTCATTTTTATGGAGCTTTTGTTTGTGAGATTGTTCATAATTTCGAGTTTCAGACATTTTCTCTTTCTCAATATATGACATCTTATTATCATTATTATAATTTTTTTTTTTTTGTGAAAACCGGTAAATCTGATCTTTGCTCCTCGGGGCACCACTCAGCCTGTT ATGACACCTTCTATCCAATTACTCCTATGGTTTAGGGTTCATAATTTATATCTCATGGACGCATCTGAAGAACGCAATTCAAATCCAGGTTTGTTCGATCGAATCCTCCCTCCCCGAATCGAAGACGCCGGCCTCGAGGATTGCGCCCTTCCTCCCGATTCCATCACCGAAGCCTTCTTCAAGGCCGCCGCCGCCGTCAAATCCTCCAGGTCCTCTGCCTTCATTTACTCCGACGACGAAGATTCCGACGGACACTGTGTCGAGAAGGAGTTGAAATTGGCGGAGTTTGGTGTAGATGAGGTCGTGGTTGGGGGAATGGAGGAGAGGAGAGGGAAGGGCTGTGTGGTAGATGTTTTGGAAGGTTTGGAGATTGAAGAGGAAGCGAAGAAGAGGAAGAAGAAGAGCGGTGAAGAGGACAAACCTATTCTGGCGGAAGGTTTTGCTTGAGATTCTCAAATTCGATTAAGTACTGTCCAACTCTTTGCTGCTCATTTTTATGGAGCTTTTGTTTGTGAGATTGTTCATAATTTCGAGTTTCAGACATTTTCTCTTTCTCAATATATGACATCTTATTATCATTATTATAATTTTTTTTTTTTTGTGAAAACCGGTAAATCTGATCTTTGCTCCTCGGGGCACCACTCAGCCTGTT ATGACACCTTCTATCCAATTACTCCTATGGTTTAGGGTTCATAATTTATATCTCATGGACGCATCTGAAGAACGCAATTCAAATCCAGGTTTGTTCGATCGAATCCTCCCTCCCCGAATCGAAGACGCCGGCCTCGAGGATTGCGCCCTTCCTCCCGATTCCATCACCGAAGCCTTCTTCAAGGCCGCCGCCGCCGTCAAATCCTCCAGGTCCTCTGCCTTCATTTACTCCGACGACGAAGATTCCGACGGACACTGTGTCGAGAAGGAGTTGAAATTGGCGGAGTTTGGTGTAGATGAGGTCGTGGTTGGGGGAATGGAGGAGAGGAGAGGGAAGGGCTGTGTGGTAGATGTTTTGGAAGGTTTGGAGATTGAAGAGGAAGCGAAGAAGAGGAAGAAGAAGAGCGGTGAAGAGGACAAACCTATTCTGGCGGAAGGTTTTGCTTGA MTPSIQLLLWFRVHNLYLMDASEERNSNPGLFDRILPPRIEDAGLEDCALPPDSITEAFFKAAAAVKSSRSSAFIYSDDEDSDGHCVEKELKLAEFGVDEVVVGGMEERRGKGCVVDVLEGLEIEEEAKKRKKKSGEEDKPILAEGFA Homology
BLAST of Sed0005168 vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothetical protein SDJN02_00096, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174.9 bits (442), Expect = 5.3e-40 Identity = 100/161 (62.11%), Postives = 115/161 (71.43%), Query Frame = 0
BLAST of Sed0005168 vs. NCBI nr
Match: XP_023523630.1 (uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173.3 bits (438), Expect = 1.5e-39 Identity = 99/161 (61.49%), Postives = 115/161 (71.43%), Query Frame = 0
BLAST of Sed0005168 vs. NCBI nr
Match: KAG6606765.1 (hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 99/161 (61.49%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Sed0005168 vs. NCBI nr
Match: XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida]) HSP 1 Score: 162.9 bits (411), Expect = 2.1e-36 Identity = 93/152 (61.18%), Postives = 108/152 (71.05%), Query Frame = 0
BLAST of Sed0005168 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 5.6e-34 Identity = 89/155 (57.42%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Sed0005168 vs. ExPASy TrEMBL
Match: A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.6e-40 Identity = 100/161 (62.11%), Postives = 115/161 (71.43%), Query Frame = 0
BLAST of Sed0005168 vs. ExPASy TrEMBL
Match: A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34 Identity = 89/155 (57.42%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Sed0005168 vs. ExPASy TrEMBL
Match: A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34 Identity = 89/155 (57.42%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Sed0005168 vs. ExPASy TrEMBL
Match: A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.0e-33 Identity = 85/147 (57.82%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of Sed0005168 vs. ExPASy TrEMBL
Match: A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.5e-32 Identity = 85/148 (57.43%), Postives = 102/148 (68.92%), Query Frame = 0
BLAST of Sed0005168 vs. TAIR 10
Match: AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 2.5e-16 Identity = 66/165 (40.00%), Postives = 87/165 (52.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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