Sed0005100 (gene) Chayote v1

Overview


Name	Sed0005100
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG04: 2203096 .. 2203602 (+)
RNA-Seq Expression	Sed0005100
Synteny	Sed0005100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCACATCGGTTCATGTCAATAGTGCTGCTCTTGTTTGTTGGTTCCTTCACGAAATGTATGGCCAAAGGCGGGTTTGGCTTATTCCCGACGAAGGGTTCACCGATACTGAAAAGGCCGATCCGACGTCCCCCGGGCCACGGCCTGATCCTCTCGCTTAAACCCTACACGATCGAGATTCACAACGACTTGCGCATGTTCTTATTGGATGTTCATTGCTTCTCGAAAGACGATGATTTAGGGTTGCATGTTCTCTTTCCAGATGAGCAACAAAATTGGTCGTTCAAAGGAAGTTTGTTTTCCACCACTCAATTTTCTTGCAAATTGGAGTGGGAAGATGGAATTTTAGAACTTGACGTTTTTCATTTAGATATTGATTTACTGCAAAATTATTGTGGCAATAGACTCTGCTCTTACAGTGCCAAGCAAGATGGGGTTTATATATTTCACGCTCTCACTCAACAATATGTTTTTCTTCAGTATTGGGACATGATTAGAAAATGA

mRNA sequence

ATGGAAGCACATCGGTTCATGTCAATAGTGCTGCTCTTGTTTGTTGGTTCCTTCACGAAATGTATGGCCAAAGGCGGGTTTGGCTTATTCCCGACGAAGGGTTCACCGATACTGAAAAGGCCGATCCGACGTCCCCCGGGCCACGGCCTGATCCTCTCGCTTAAACCCTACACGATCGAGATTCACAACGACTTGCGCATGTTCTTATTGGATGTTCATTGCTTCTCGAAAGACGATGATTTAGGGTTGCATGTTCTCTTTCCAGATGAGCAACAAAATTGGTCGTTCAAAGGAAGTTTGTTTTCCACCACTCAATTTTCTTGCAAATTGGAGTGGGAAGATGGAATTTTAGAACTTGACGTTTTTCATTTAGATATTGATTTACTGCAAAATTATTGTGGCAATAGACTCTGCTCTTACAGTGCCAAGCAAGATGGGGTTTATATATTTCACGCTCTCACTCAACAATATGTTTTTCTTCAGTATTGGGACATGATTAGAAAATGA

Coding sequence (CDS)

ATGGAAGCACATCGGTTCATGTCAATAGTGCTGCTCTTGTTTGTTGGTTCCTTCACGAAATGTATGGCCAAAGGCGGGTTTGGCTTATTCCCGACGAAGGGTTCACCGATACTGAAAAGGCCGATCCGACGTCCCCCGGGCCACGGCCTGATCCTCTCGCTTAAACCCTACACGATCGAGATTCACAACGACTTGCGCATGTTCTTATTGGATGTTCATTGCTTCTCGAAAGACGATGATTTAGGGTTGCATGTTCTCTTTCCAGATGAGCAACAAAATTGGTCGTTCAAAGGAAGTTTGTTTTCCACCACTCAATTTTCTTGCAAATTGGAGTGGGAAGATGGAATTTTAGAACTTGACGTTTTTCATTTAGATATTGATTTACTGCAAAATTATTGTGGCAATAGACTCTGCTCTTACAGTGCCAAGCAAGATGGGGTTTATATATTTCACGCTCTCACTCAACAATATGTTTTTCTTCAGTATTGGGACATGATTAGAAAATGA

Protein sequence

MEAHRFMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDMIRK

Homology

[Close]

BLAST of Sed0005100 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-35
Identity = 80/165 (48.48%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 3   AHRFMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIEIH 62
           A R   ++++L +      MAK          SP  K  +   P    ++  + +T+EIH
Sbjct: 2   ALRLTLLLVILLLAPLRTSMAKKK----AKNKSPTPKLSVPNNP----VVMFERFTVEIH 61

Query: 63  NDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVF 122
           NDLRMF+LD HC+SKDDDLGLH+LFPDE+Q+WSFKG+  +TT F C+LEWE G LE D F
Sbjct: 62  NDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSF 121

Query: 123 HLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDMIR 168
               D + NYCGN+ C +SA+QDGVY+ +A  +Q VF  YW+MIR
Sbjct: 122 KSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQ-VFYNYWEMIR 157

[Close]

BLAST of Sed0005100 vs. NCBI nr
Match: KGN51432.1 (hypothetical protein Csa_007732 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.4e-34
Identity = 78/166 (46.99%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 1   MEAHRFMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIE 60
           M  H  + ++ L  +  F   MA+  F   P K S               I+ L  Y IE
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMAR--FSFAPQKSS---------------IIQLHHYQIE 60

Query: 61  IHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELD 120
           IHNDL M+LLD HCFSKD+DLGLH+LFP E Q+WSF+ + F TT+F C LEWE+G+LE D
Sbjct: 61  IHNDLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFD 120

Query: 121 VFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDMI 167
            F  + + L N+CGN  CS+SA+QDGVY+ + +  +YVF  YWDM+
Sbjct: 121 SFKTNHNFLNNFCGNLTCSWSARQDGVYLTN-VKGEYVFQDYWDML 148

[Close]

BLAST of Sed0005100 vs. NCBI nr
Match: XP_008453057.1 (PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 8.4e-34
Identity = 64/102 (62.75%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 51  ILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKL 110
           I+ L+ Y ++IHNDL M+LLD HCFSKD+DLGLH+LFP EQQ+WSF+ ++F TT+F C+L
Sbjct: 15  IIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFETTKFRCRL 74

Query: 111 EWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHA 153
           EWE+G+LE D F  D+D L N+CGN  CS+SAKQDGVY+ +A
Sbjct: 75  EWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTNA 116

[Close]

BLAST of Sed0005100 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-32
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 31  PTKGSPILKRPIRRPPGHGLILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDE 90
           P K  P   +P    P      + + +T+EIHNDLRMF+LD HC SKDDDLGLH+LFPDE
Sbjct: 35  PKKTKPKFLKPNNPNP------AFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDE 94

Query: 91  QQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDID-LLQNYCGNRLCSYSAKQDGVYI 150
           +Q+WSF  +   TT+F C+LEW+ G+LE D FH + D LL +YC N  C +SA+QDGVY+
Sbjct: 95  EQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLIDYCANATCIWSARQDGVYL 154

Query: 151 FHALTQQYVFLQYWDMI 167
            +      VF +YWDM+
Sbjct: 155 -NNQDDDLVFYEYWDML 164

[Close]

BLAST of Sed0005100 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-29
Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 45  PPGHGLILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTT 104
           P  H  +++   + I I+N+L+M+LLD HC+SKDDDLG  VL+P+++Q+WSF+G+   TT
Sbjct: 18  PKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWSFRGNWLGTT 77

Query: 105 QFSCKLEWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWD 164
            F CKLEWE+G LE D F  D+  L N+C    C +SA+QDGVY+ +    Q VF Q W+
Sbjct: 78  NFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQ-NGQVVFNQNWE 137

Query: 165 MIR 168
           MIR
Sbjct: 138 MIR 139

[Close]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 30/96 (31.25%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 70  LDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDLL 129
           L +HC SK+DDLG   L    + +W+F  ++  +T F C +  ++G + ++VF  D+ +L
Sbjct: 55  LFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDV-IL 114

Query: 130 QNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDM 166
            + CG + C ++AK DG+Y++++ + + V  + W++
Sbjct: 115 FHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-08
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 58  TIEIHNDL-RMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGI 117
           T+EI+NDL     L  HC SKDDDLG   L P E  ++SF    F  T + C   W +  
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 118 LELDVF--HLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWD 165
              D++  H D     N C +  C +  +++G   F+  T+Q+     W+
Sbjct: 109 HSFDIYKDHRDSG-GDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWN 157

[Close]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.3e-08
Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 70  LDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDLL 129
           L + C SKDDDLG H+L   +   W F+ S F TT F+CK  W + +   D +  D D  
Sbjct: 45  LTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRD-- 104

Query: 130 QNYCGNRLCSYSAKQDGVYI 150
           Q +C +  C++S   D   I
Sbjct: 105 QGHCYS--CNWSINADSACI 120

[Close]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 45/161 (27.95%), Postives = 70/161 (43.48%), Query Frame = 0


Query: 6   FMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIEIHNDL 65
           F S+  +  V  F  C     +  F   G P    PIR P        L   T++ +ND 
Sbjct: 14  FSSMFTICIVMIFVTC-----YETFQQDGEPF---PIRGP--------LTRITVKNNND- 73

Query: 66  RMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKL---EWEDGILELDVF 125
             +LL +HC SKDDDLG H+    E   W F  +  ++T + C     +   G+ ++D  
Sbjct: 74  --YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRA 133

Query: 126 HLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYW 164
             D    +N      C+++AK+D +Y +  L Q   +   W
Sbjct: 134 ERDFYRCRN------CTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07
Identity = 30/95 (31.58%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 70  LDVHCFSKDDDLG-LHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDL 129
           L +HC SK++DLG +++ F D + +W+F  ++  +T F C +  +DG + + VF  D+ +
Sbjct: 55  LFIHCKSKENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDV-I 114

Query: 130 LQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYW 164
           L + C  + C ++AK DG+Y++++   + V  + W
Sbjct: 115 LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0005100 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 5.7e-36
Identity = 70/117 (59.83%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 51  ILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKL 110
           ++  + +T+EIHNDLRMF+LD HC+SKDDDLGLH+LFPDE+Q+WSFKG+  +TT F C+L
Sbjct: 22  VVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRL 81

Query: 111 EWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDMIR 168
           EWE G LE D F    D + NYCGN+ C +SA+QDGVY+ +A  +Q VF  YW+MIR
Sbjct: 82  EWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQ-VFYNYWEMIR 137

[Close]

BLAST of Sed0005100 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34
Identity = 78/166 (46.99%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 1   MEAHRFMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIE 60
           M  H  + ++ L  +  F   MA+  F   P K S               I+ L  Y IE
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMAR--FSFAPQKSS---------------IIQLHHYQIE 60

Query: 61  IHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELD 120
           IHNDL M+LLD HCFSKD+DLGLH+LFP E Q+WSF+ + F TT+F C LEWE+G+LE D
Sbjct: 61  IHNDLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFD 120

Query: 121 VFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDMI 167
            F  + + L N+CGN  CS+SA+QDGVY+ + +  +YVF  YWDM+
Sbjct: 121 SFKTNHNFLNNFCGNLTCSWSARQDGVYLTN-VKGEYVFQDYWDML 148

[Close]

BLAST of Sed0005100 vs. ExPASy TrEMBL
Match: A0A1S3BVC0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493879 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.1e-34
Identity = 64/102 (62.75%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 51  ILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKL 110
           I+ L+ Y ++IHNDL M+LLD HCFSKD+DLGLH+LFP EQQ+WSF+ ++F TT+F C+L
Sbjct: 15  IIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFETTKFRCRL 74

Query: 111 EWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHA 153
           EWE+G+LE D F  D+D L N+CGN  CS+SAKQDGVY+ +A
Sbjct: 75  EWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTNA 116

[Close]

BLAST of Sed0005100 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 31  PTKGSPILKRPIRRPPGHGLILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDE 90
           P K  P   +P    P      + + +T+EIHNDLRMF+LD HC SKDDDLGLH+LFPDE
Sbjct: 35  PKKTKPKFLKPNNPNP------AFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDE 94

Query: 91  QQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDID-LLQNYCGNRLCSYSAKQDGVYI 150
           +Q+WSF  +   TT+F C+LEW+ G+LE D FH + D LL +YC N  C +SA+QDGVY+
Sbjct: 95  EQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFHSNTDNLLIDYCANATCIWSARQDGVYL 154

Query: 151 FHALTQQYVFLQYWDMI 167
            +      VF +YWDM+
Sbjct: 155 -NNQDDDLVFYEYWDML 164

[Close]

BLAST of Sed0005100 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 45  PPGHGLILSLKPYTIEIHNDLRMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTT 104
           P  H  +++   + I I+N+L+M+LLD HC+SKDDDLG  VL+P+++Q+WSF+G+   TT
Sbjct: 18  PKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWSFRGNWLGTT 77

Query: 105 QFSCKLEWEDGILELDVFHLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWD 164
            F CKLEWE+G LE D F  D+  L N+C    C +SA+QDGVY+ +    Q VF Q W+
Sbjct: 78  NFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQ-NGQVVFNQNWE 137

Query: 165 MIR 168
           MIR
Sbjct: 138 MIR 139

[Close]

BLAST of Sed0005100 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 30/96 (31.25%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 70  LDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDLL 129
           L +HC SK+DDLG   L    + +W+F  ++  +T F C +  ++G + ++VF  D+ +L
Sbjct: 55  LFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDV-IL 114

Query: 130 QNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWDM 166
            + CG + C ++AK DG+Y++++ + + V  + W++
Sbjct: 115 FHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Sed0005100 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-09
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 58  TIEIHNDL-RMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGI 117
           T+EI+NDL     L  HC SKDDDLG   L P E  ++SF    F  T + C   W +  
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 118 LELDVF--HLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYWD 165
              D++  H D     N C +  C +  +++G   F+  T+Q+     W+
Sbjct: 109 HSFDIYKDHRDSG-GDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWN 157

[Close]

BLAST of Sed0005100 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 57.8 bits (138), Expect = 9.9e-09
Identity = 45/161 (27.95%), Postives = 70/161 (43.48%), Query Frame = 0


Query: 6   FMSIVLLLFVGSFTKCMAKGGFGLFPTKGSPILKRPIRRPPGHGLILSLKPYTIEIHNDL 65
           F S+  +  V  F  C     +  F   G P    PIR P        L   T++ +ND 
Sbjct: 14  FSSMFTICIVMIFVTC-----YETFQQDGEPF---PIRGP--------LTRITVKNNND- 73

Query: 66  RMFLLDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKL---EWEDGILELDVF 125
             +LL +HC SKDDDLG H+    E   W F  +  ++T + C     +   G+ ++D  
Sbjct: 74  --YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRA 133

Query: 126 HLDIDLLQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYW 164
             D    +N      C+++AK+D +Y +  L Q   +   W
Sbjct: 134 ERDFYRCRN------CTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Sed0005100 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 30/95 (31.58%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 70  LDVHCFSKDDDLG-LHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDL 129
           L +HC SK++DLG +++ F D + +W+F  ++  +T F C +  +DG + + VF  D+ +
Sbjct: 55  LFIHCKSKENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDV-I 114

Query: 130 LQNYCGNRLCSYSAKQDGVYIFHALTQQYVFLQYW 164
           L + C  + C ++AK DG+Y++++   + V  + W
Sbjct: 115 LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0005100 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-08
Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0


Query: 70  LDVHCFSKDDDLGLHVLFPDEQQNWSFKGSLFSTTQFSCKLEWEDGILELDVFHLDIDLL 129
           L +HC SK DDLG+HV+   ++ ++ F+ +L+ +T F C  +W+      D++    D  
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRD-- 101

Query: 130 QNYCGNRLCSYSAKQDG 147
           Q  C +  C +  K DG
Sbjct: 102 QGICDD--CQWEIKPDG 114

The following BLAST results are available for this feature:

BLAST of Sed0005100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648167.1	1.2e-35	48.48	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
KGN51432.1	6.4e-34	46.99	hypothetical protein Csa_007732 [Cucumis sativus]	[more]
XP_008453057.1	8.4e-34	62.75	PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo]	[more]
XP_022933678.1	2.7e-32	51.09	S-protein homolog 2-like [Cucurbita moschata]	[more]
XP_008453055.1	3.6e-29	49.59	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]

BLAST of Sed0005100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	2.8e-08	31.25	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
F4JLQ5	4.8e-08	32.73	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN93	6.3e-08	37.50	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FI84	1.4e-07	27.95	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
Q2HQ46	4.1e-07	31.58	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]

BLAST of Sed0005100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL79	5.7e-36	59.83	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A0A0KSN2	3.1e-34	46.99	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1	[more]
A0A1S3BVC0	4.1e-34	62.75	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493879 PE=3 SV=1	[more]
A0A6J1F5H5	1.3e-32	51.09	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A1S3BUQ9	1.8e-29	49.59	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]

BLAST of Sed0005100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	2.0e-09	31.25	S-protein homologue 1	[more]
AT4G16195.1	3.4e-09	32.73	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	9.9e-09	27.95	Plant self-incompatibility protein S1 family	[more]
AT4G29035.1	2.9e-08	31.58	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	3.8e-08	32.47	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 58..163 e-value: 7.8E-21 score: 74.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 49..158
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 49..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005100.1	Sed0005100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region