Sed0005084 (gene) Chayote v1

Overview


Name	Sed0005084
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG11: 35099008 .. 35100528 (+)
RNA-Seq Expression	Sed0005084
Synteny	Sed0005084

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGAACTCCAATGACCAAGGGTGGAAAATGGAGAATAGTGATCGAAAGGAAAAATTACTGATCGATGGGGTGCGTCTTGTGATACAACGGTCGGATTTAACCACGGAGGTGCAGTCGAAGTCGCAGAATGTAGAAGCTACGGAGGGCAGTCAGAGATCTAGGGTGGAAGAGACAATGATGGGAGCTATTGCATATGATGGTGCGGGAAATATATTGGGATTTGGAAAAAAAGGCCTTTTAGGGCCTGAGGAGATGGAAAGCCGTCACAAAAGGGATGGTCTAGATTTTATTGGTAAAATTGGGAATAGTTCAAATGAGGGGCTGTTGTCTGAAGGGAGGAAAAAAGTCATCTTAAAAACCAATGAAGAGGGGCATGACTCAGTAGATTATCCCACTAAATCCACGAGGAATCTCAATAGTGCCAAAACCCCAATGGCTAGAAAGGACCGAGAAGAATGGGAAAAATCTGGTTTGAAGCTTAATGCTCCTGTGGAGTCAGTAAATGCGAGTGAGCAAAATAGTATAGGGAAGCTCTTGGAGGCTGACATGGAGCTTGGTAAACAACGCTCAGCAACAGGGGCTAATGAATTTCATCCACCCATAAACAAAATAAAAGGGGATAAATGGAAAAGAAAGGCAAGAGCCAAAGCAAGCTTGAGTGATATGGATCAGAGGATAGAAGATGATCAAATCAGAGACTCAATGATATGTGGTAAGAAACATGGTCTGGAAGGGCTGTCCGAGGAGAATGGGAAAAAAAGAGCGCGAGCTATTGACGTTGAATTGATCAGCGGGATATCGGCGGAGGCTGTTGTAAAGCCCCGCCGGACGCAATGAAAATTTTATGTTGGAATGTACGGGGGTTGGGGAATCCTCGTACATTCACTGCGCTCCGCCATGAAGTGCAGAAAGAAAATCCCTAGGTGGTCTTCCTTTCTGAGACAAAAGGAGGGAAAATGCTAGCGGATAAAACAAAAATTGCGTTAAATTTTGAAAATTGCTTTTGTGTTCCTAGTGAAGGCTTGAGTGGAGGGCTTTTGATGTTATGGAACAAGGAGATTGATGCTCAAGTGGTGTCTTATTCGCTCGGGCATATTGACATGATGATAAAAGATATTCTAGGTGGTTGGAGATTTACGGGGTTCTATGGGAATCCGGTGGCAACAAACAGGGTGCACTCGTGGGACCTATTGAAAAGAATTTATTCTCAATCATCGGCTCCCTGGATTGTTGCCGGGGATTTCAATGAGGTTTTATGCGAGTCTGAGCATTCTAATGGAAGTAAGAGATGCCTTCAAAGTATTTTGAGATTCAGAGAAGTGGTGGACGAATGTTCTCTTATCGATCCGGGCCATGCTGGAGACAATTTTACTTGGAGTCGAAATAAAAATGTGTCAAGTGCTGTTCGAGTTCGCCTGGATAGGTTTTTGTTTTCTCAATCTTTATCTCAATATATTGATTTTATGCGTGTTGATCATCTTAATTATCACTTCTCTGATCATAGGCCAATATTAG

mRNA sequence

ATGGAAGAGAACTCCAATGACCAAGGGTGGAAAATGGAGAATAGTGATCGAAAGGAAAAATTACTGATCGATGGGGTGCGTCTTGTGATACAACGGTCGGATTTAACCACGGAGGTGCAGTCGAAGTCGCAGAATGTAGAAGCTACGGAGGGCAGTCAGAGATCTAGGGTGGAAGAGACAATGATGGGAGCTATTGCATATGATGGTGCGGGAAATATATTGGGATTTGGAAAAAAAGGCCTTTTAGGGCCTGAGGAGATGGAAAGCCGTCACAAAAGGGATGGTCTAGATTTTATTGGTAAAATTGGGAATAGTTCAAATGAGGGGCTGTTGTCTGAAGGGAGGAAAAAAGTCATCTTAAAAACCAATGAAGAGGGGCATGACTCAGTAGATTATCCCACTAAATCCACGAGGAATCTCAATAGTGCCAAAACCCCAATGGCTAGAAAGGACCGAGAAGAATGGGAAAAATCTGGTTTGAAGCTTAATGCTCCTGTGGAGTCAGTAAATGCGAGTGAGCAAAATAGTATAGGGAAGCTCTTGGAGGCTGACATGGAGCTTGGTAAACAACGCTCAGCAACAGGGGCTAATGAATTTCATCCACCCATAAACAAAATAAAAGGGGATAAATGGAAAAGAAAGGCAAGAGCCAAAGCAAGCTTGAGTGATATGGATCAGAGGATAGAAGATGATCAAATCAGAGACTCAATGATATGTGGCCAATATTAG

Coding sequence (CDS)

ATGGAAGAGAACTCCAATGACCAAGGGTGGAAAATGGAGAATAGTGATCGAAAGGAAAAATTACTGATCGATGGGGTGCGTCTTGTGATACAACGGTCGGATTTAACCACGGAGGTGCAGTCGAAGTCGCAGAATGTAGAAGCTACGGAGGGCAGTCAGAGATCTAGGGTGGAAGAGACAATGATGGGAGCTATTGCATATGATGGTGCGGGAAATATATTGGGATTTGGAAAAAAAGGCCTTTTAGGGCCTGAGGAGATGGAAAGCCGTCACAAAAGGGATGGTCTAGATTTTATTGGTAAAATTGGGAATAGTTCAAATGAGGGGCTGTTGTCTGAAGGGAGGAAAAAAGTCATCTTAAAAACCAATGAAGAGGGGCATGACTCAGTAGATTATCCCACTAAATCCACGAGGAATCTCAATAGTGCCAAAACCCCAATGGCTAGAAAGGACCGAGAAGAATGGGAAAAATCTGGTTTGAAGCTTAATGCTCCTGTGGAGTCAGTAAATGCGAGTGAGCAAAATAGTATAGGGAAGCTCTTGGAGGCTGACATGGAGCTTGGTAAACAACGCTCAGCAACAGGGGCTAATGAATTTCATCCACCCATAAACAAAATAAAAGGGGATAAATGGAAAAGAAAGGCAAGAGCCAAAGCAAGCTTGAGTGATATGGATCAGAGGATAGAAGATGATCAAATCAGAGACTCAATGATATGTGGCCAATATTAG

Protein sequence

MEENSNDQGWKMENSDRKEKLLIDGVRLVIQRSDLTTEVQSKSQNVEATEGSQRSRVEETMMGAIAYDGAGNILGFGKKGLLGPEEMESRHKRDGLDFIGKIGNSSNEGLLSEGRKKVILKTNEEGHDSVDYPTKSTRNLNSAKTPMARKDREEWEKSGLKLNAPVESVNASEQNSIGKLLEADMELGKQRSATGANEFHPPINKIKGDKWKRKARAKASLSDMDQRIEDDQIRDSMICGQY

Homology

The following BLAST results are available for this feature:

BLAST of Sed0005084 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0005084 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0005084 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0005084 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005084.1	Sed0005084.1	mRNA