Sed0005065 (gene) Chayote v1

Overview


Name	Sed0005065
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNL-type zinc finger protein
Location	LG06: 42863960 .. 42867353 (-)
RNA-Seq Expression	Sed0005065
Synteny	Sed0005065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGGCAAAGACTATCTTCTTTTCCTCTCCAGTGGCGATTCTTCATCAGTCCGTCAAATCTTCGCAAACTCAGCCGCGTCCATCAATTCCGACATTCAAACCTGTTATCTCTTTGAAAGCAAACCCTAGCAATGGCGTCTTCATCAGGTAAGCGATCCAAAACTTCTTACTCCGTTTCTACAATTTTCTCTTTTGCACTATCAAATTGAGCGTTTCATTTCCAGTTGTAGGCAATTTCACATCGCACCGGTTACTCGAGCACGGAGAAACAAGTTGATTACGGTTTCTGGATTGGCGGATTGCAATCCCGGCGGTGAAAATGGATCTTCAGATACAGATTCGGATACGGTATGAATGGATAACAGAAATTAGTTCTTGTTCTTTGAGTGAGAGATTCTTGGGCTTAGCTTTTGTTTATCTTTCTCCGATTTGCAGGGGGCTGCTGCTATTGATATAAAGCTTCCAAGAAGAAGTTTGAGTGTAACTTTTACTTGTAACCAATGTGGTGAGAGGACGAAGAGGCTCGTTAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGGTACGCTCTTGTGCTTCACCATTGTATGTCAATGTTCTATTGTGTTACAAAATCTCATTGCTATGATCAAATTTGGAATTATATCTTAGTATTTTGCTTTAGCAATTCAAGTAAGGGAGAGCATTTTCCTGCCATTGAAGCGCTGAGGCGACTGTGCTTATGTTTTTGTTTGGATTTTTAGTGTTACATATTGATTTGATTATCTTTTCTTATCTCTCTTGATAATCTAATAGAACTGAGGAAGGAAGCTCTGAAATTGTAGTTGTGCCATTAGAGCATGTATAATCGTGACCATCATGGGTTGGCCTGGCTTGGTCGAGTGGTCATGTCAGGAGGGTATTGAGAACTAAGAATTTATAAGTTCAATCTATTGTAGTCTACCTGAGAATTAATTTTCTACGGATTTCCTTGACAACCAAATGTGATCAAGCATTTACTATGTGAAAATAGTCAAAGTGCGCATAAGTTGGCTCGTACACTCATCCATTTAAAACAAGGCATTTGTAACCTTTTGCGAAGGAAATTATTTCATGGCACAGTTGGTCAGTTCCTGAATTCTACTGACTGCTTATGGACATGGTTGTAGACCACATTATTGAGTTCTAGTCGTCTTTCAGGGCTCTTTCCATCTCATATTTGTCTCTCCAAATTGTTTGAATGATAGGGGCTGTTTGTTTGGCATATTTAGGTAGGATTTAGTTTTAGGATTTATTAACTCCTCCTCGAAAACCTATATCCAAACGAGTTTTTATTAACTCCTCCTCATTTTTACTTTTAAGAATAACTCTCATTTCTAACCATTCATTTTTAATTATTCATTTATAACTACTCAATCATTTCTAACCACTCATTTTTAATCATTTCTTCCAAATAAATCAAAATAACTAATTTTTAACCATTCATTTTTAATCATTTCTTTTTTAACTACTAAAAGTAACTACTCATTTTTAAATCTACATTCAAACAAGATTTTGACTATAACTCAACTATACAAAAACTACATCCAAACGAGTTTTTGACACAACTCTCAATTTTTAACTACTCAATATAACTCCTCAATATAGCTCCTTAACCCAAATACTACCTAAATATGTCAAACAAACATCCCCTATGGTCTTCATAGATTATAATAGTGAGTTGAGACGTCAAAATAATGTTCAAGACATTTCCAACCCTATCTCTTTAGAAGAAATTAAGAAAAGTAATGAGTGGTTGGCTGGCAGAATAGATGGCGAATCTAAATCGGGAGATGGTTTTTTTATCACGGAGTGGAAGAACCTACCAATTTCTCTAGAGAAGGTATTTCAAAAACTACAAAGAGTACTTTATATTCAATCGATGTGGAAGTTGATAGTAATGAGACTGTAGAGGAAGATGCTGACAACCATGAGTCGGATGGTTAGGAGATTGTGGAAAATGTAGATAATTATGAGTTCAATGGTGTCCGCAAGGGGTGGCACGGTGGTCGAAGGCGTGCTCCCCTCAAGATCTCAAGTTCGATATTCACTTGTGACATTAATTTGTACTTTTGTAGACACTTCCTGTATCTCCATTCCTTTGATATTTTCCAATGTCTAGCCTAGGGACCTGTCGTGGTTATTCCGATTATAGTGGAGCGAAAGTCTGATTTACTGGTTTAAAAAAAAATTGAGTTCAATGGTAATGAGACTAAAGTAGACTACTATCTGTCCAATGGTAATGAAACTGAAGAAGATGTAGACAACTGAAGTTCGACGATGGAAGAGATGAGATTGGGAGCCTATTTAGTGATGATAAGCTTTGATGATTCAGATTACTTTTATGGTTTTGTGGACTCTTTTGCTGCTGAAATACAATATATTGGAACTTCATTTATCTTTTATAGATTATATTTTATATTTGCTCCACCTCCTTTCTCTTGCTAATATTTATTTGTTCTATGTATTTTTCATATTTTTTCCTGTAAAAGAAAATAATTTGTATTTTCATCTGCTATGTGCCTTCAAGAAATAGAAGATTTTTTTGGCATCTCATATTAAGTTTTTTTTGTGGACTTTTTTTTTTGCTAATATTTATTAGGATTGTCGTTGTTTGAGTTCTAAATAACATGGTGAATCTCTAAGAAGTTGAAGACAAAAGAAGAGGAAAATGTTTTCATTGTAAAATAGTTCAAAATCTTGGAAGAAAAGGAAAAGAAAGTGACTGAGTTTTGTTCTTTAAGAGATCTGATTTGTTCAATATGAATGTATTTTTAAAACCAAACTTGCCAACATTTTGAAGAGAGGGAAACTTACTAATTATGAACTTTAAACCACCAAGTCATTTAAAATTTTATAATTGAAAAAATGCCTCTATTTCAAATGAAAAGTTGGTACTAAATAGATTAAATTTCATGTTAGCAATGTCTCGCAAATCAAAAAAGAAAAAAAATCACCCTAGTTCTATTTTATGCTTTCAAAATCAAAATTAAAAATAGAAAGTTAATTGAGAAAATGAATTTAAACAAAAAATGGAAGTGATTTAGGGTAGGTTTAAGCCATTTTACACAACTGGTTTAAAAGAAAAAGGAAAGGTTTAATTTATGATGTTACCCCGATTGTTTCTTGCAGTTCTATAGGTCCTCTTAACCATTTCTTAATTCTTACATCAGTGTTTTTAATGGTTGCTTTATGTAGCAAATGTTAAACTGTTTCTCAATGTGGTTTATCTGATCCTACCAATTAACACTCTCTGGACAGTGTGCAGGATGTTTAAAGTATCACAAACTGGTGGATAATCTTGGTCTGATCGTAGAATACGACTTCCGGGAGGAGGATGCGGACTCAAATTCAGGACAAGTTTGA

mRNA sequence

ATGGCAGCGGCAAAGACTATCTTCTTTTCCTCTCCAGTGGCGATTCTTCATCAGTCCGTCAAATCTTCGCAAACTCAGCCGCGTCCATCAATTCCGACATTCAAACCTGTTATCTCTTTGAAAGCAAACCCTAGCAATGGCGTCTTCATCAGTTGTAGGCAATTTCACATCGCACCGGTTACTCGAGCACGGAGAAACAAGTTGATTACGGTTTCTGGATTGGCGGATTGCAATCCCGGCGGTGAAAATGGATCTTCAGATACAGATTCGGATACGGGGGCTGCTGCTATTGATATAAAGCTTCCAAGAAGAAGTTTGAGTGTAACTTTTACTTGTAACCAATGTGGTGAGAGGACGAAGAGGCTCGTTAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGATGTTTAAAGTATCACAAACTGGTGGATAATCTTGGTCTGATCGTAGAATACGACTTCCGGGAGGAGGATGCGGACTCAAATTCAGGACAAGTTTGA

Coding sequence (CDS)

ATGGCAGCGGCAAAGACTATCTTCTTTTCCTCTCCAGTGGCGATTCTTCATCAGTCCGTCAAATCTTCGCAAACTCAGCCGCGTCCATCAATTCCGACATTCAAACCTGTTATCTCTTTGAAAGCAAACCCTAGCAATGGCGTCTTCATCAGTTGTAGGCAATTTCACATCGCACCGGTTACTCGAGCACGGAGAAACAAGTTGATTACGGTTTCTGGATTGGCGGATTGCAATCCCGGCGGTGAAAATGGATCTTCAGATACAGATTCGGATACGGGGGCTGCTGCTATTGATATAAAGCTTCCAAGAAGAAGTTTGAGTGTAACTTTTACTTGTAACCAATGTGGTGAGAGGACGAAGAGGCTCGTTAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGATGTTTAAAGTATCACAAACTGGTGGATAATCTTGGTCTGATCGTAGAATACGACTTCCGGGAGGAGGATGCGGACTCAAATTCAGGACAAGTTTGA

Protein sequence

MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPVTRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDADSNSGQV

Homology

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BLAST of Sed0005065 vs. NCBI nr
Match: KAG6601335.1 (DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.2 bits (609), Expect = 2.6e-59
Identity = 125/172 (72.67%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT++FSSP A+L QS  SSQT+P PSI  F+P++S KANPSN  FI  R F  APV
Sbjct: 1   MAAAKTLWFSSP-ALLQQSFNSSQTRPHPSIKAFRPIVSSKANPSNDFFIRSRSFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

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BLAST of Sed0005065 vs. NCBI nr
Match: XP_023511593.1 (DNL-type zinc finger protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.4 bits (607), Expect = 4.5e-59
Identity = 125/172 (72.67%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+  SSP A+L QS   SQT+P PSI  F+P++S KANPSNG FI  R F  APV
Sbjct: 1   MAAAKTLCSSSP-ALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFIRSRSFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N GG++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGGDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

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BLAST of Sed0005065 vs. NCBI nr
Match: XP_022987077.1 (DNL-type zinc finger protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 7.6e-59
Identity = 124/172 (72.09%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+ FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FIS R F  APV
Sbjct: 1   MAAAKTLCFSSP-ALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D + G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGDSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR++D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 170

[Close]

BLAST of Sed0005065 vs. NCBI nr
Match: KAG7032119.1 (DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.3 bits (604), Expect = 9.9e-59
Identity = 125/172 (72.67%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+ FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FI  R F  APV
Sbjct: 1   MAAAKTLCFSSP-ALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of Sed0005065 vs. NCBI nr
Match: XP_022956509.1 (uncharacterized protein LOC111458229 isoform X1 [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-58
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT  FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FI  R F  APV
Sbjct: 1   MAAAKTQCFSSP-ALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

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BLAST of Sed0005065 vs. ExPASy Swiss-Prot
Match: Q5SXM8 (DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07
Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 86  SDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYHK 145
           S ++   G AA   ++      + +TC  CG R+ + +++LAY +G+V V C GC  +H 
Sbjct: 49  SSSEQGPGPAAALGRVEAAHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHI 108

Query: 146 LVDNLG 152
           + DNLG
Sbjct: 109 IADNLG 114

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BLAST of Sed0005065 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06
Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 85  SSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYH 144
           SS +   +G AA   ++      + +TC  CG R+ + +++LAY +G+V V C GC  +H
Sbjct: 52  SSSSAPGSGRAAALGRVEADHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHH 111

Query: 145 KLVDNL 151
            + DNL
Sbjct: 112 IIADNL 117

[Close]

BLAST of Sed0005065 vs. ExPASy Swiss-Prot
Match: Q0IH40 (DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.9e-06
Identity = 19/58 (32.76%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 102 PRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR 160
           P     + +TC  C  R+ + ++++AY +G+V V+C GC  +H + DNLG   + + R
Sbjct: 78  PSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGR 135

[Close]

BLAST of Sed0005065 vs. ExPASy Swiss-Prot
Match: A1L1P7 (DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.0e-05
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 108 VTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYHKLVDNL 151
           + +TC  C  R+ + +++LAY +G+V V C GC  +H + DNL
Sbjct: 83  LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNL 125

[Close]

BLAST of Sed0005065 vs. ExPASy TrEMBL
Match: A0A6J1J9C7 (DNL-type zinc finger protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484608 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.7e-59
Identity = 124/172 (72.09%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+ FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FIS R F  APV
Sbjct: 1   MAAAKTLCFSSP-ALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D + G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGDSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR++D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 170

[Close]

BLAST of Sed0005065 vs. ExPASy TrEMBL
Match: A0A6J1GZ90 (uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458229 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT  FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FI  R F  APV
Sbjct: 1   MAAAKTQCFSSP-ALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of Sed0005065 vs. ExPASy TrEMBL
Match: A0A5A7SVJ1 (Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00560 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.1e-58
Identity = 125/172 (72.67%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+ FSSP  +LH     SQT P PSI +FKP++S KANPSNGVFI  R F  APV
Sbjct: 1   MAAAKTVIFSSP-TLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR RR K++TVS L D   G ++ SS  +SDTG AAIDIKLPRRSL VTFTCNQC ERTK
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTG-AAIDIKLPRRSLMVTFTCNQCSERTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDA--DSNSGQV 171
           RL+NRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFREED   DSNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of Sed0005065 vs. ExPASy TrEMBL
Match: A0A1S3BG31 (uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.1e-58
Identity = 125/172 (72.67%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT+ FSSP  +LH     SQT P PSI +FKP++S KANPSNGVFI  R F  APV
Sbjct: 1   MAAAKTVIFSSP-TLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR RR K++TVS L D   G ++ SS  +SDTG AAIDIKLPRRSL VTFTCNQC ERTK
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTG-AAIDIKLPRRSLMVTFTCNQCSERTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDA--DSNSGQV 171
           RL+NRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFREED   DSNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of Sed0005065 vs. ExPASy TrEMBL
Match: A0A6J1GXZ4 (mitochondrial protein import protein ZIM17 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458229 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.1e-58
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MAAAKTIFFSSPVAILHQSVKSSQTQPRPSIPTFKPVISLKANPSNGVFISCRQFHIAPV 60
           MAAAKT  FSSP A+L QS   SQT+P PSI  F+P++S KANPSNG FI C  F  APV
Sbjct: 1   MAAAKTQCFSSP-ALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRC--FRTAPV 60

Query: 61  TRARRNKLITVSGLADCNPGGENGSSDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTK 120
           TR  RNK++TVS L D N G ++ S+  +SDTG AAIDIKLPRRSL VTFTCNQCG+RTK
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTG-AAIDIKLPRRSLLVTFTCNQCGDRTK 120

Query: 121 RLVNRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREEDAD--SNSGQV 171
           RL+NRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRE+D D  SNS QV
Sbjct: 121 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 168

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BLAST of Sed0005065 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-32
Identity = 77/145 (53.10%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 27  PRPSIPTFKPVISLKANPSNGVFISCRQFHIAPVTRARRNKLITVSG-LADCNPGGENGS 86
           PRP      P+ +L  + +  V        I  VT  +RN+  +V G LAD      N  
Sbjct: 36  PRPFYKQQNPISALHRSKTTRV--------IEVVTPKQRNRSFSVFGSLAD--DSKLNPD 95

Query: 87  SDTDSDTGAAAIDIKLPRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQCAGCLKYHK 146
            +++     A+IDIKLPRRSL V FTCN CGERTKRL+NR AYE+GLVFVQCAGCLK+HK
Sbjct: 96  EESNDSAEVASIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHK 155

Query: 147 LVDNLGLIVEYDFREEDADSNSGQV 171
           LVDNLGLIVEYDFRE   D  +  V
Sbjct: 156 LVDNLGLIVEYDFRETSKDLGTDHV 170

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BLAST of Sed0005065 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 81  GENGSSDTDSDTGAA---AIDIKLPRRSLSVTFTCNQCGERTKRLVNRLAYERGLVFVQC 140
           G +  + TD+DT +    ++  K PRR + V FTCN CG+RT R +N  AY  G VFVQC
Sbjct: 93  GPSLPAKTDTDTVSTFPWSLFTKSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQC 152

Query: 141 AGCLKYHKLVDNLGLIVEYDF 159
            GC  +HKLVDNL L  E  +
Sbjct: 153 CGCNVFHKLVDNLNLFHEVKY 173

The following BLAST results are available for this feature:

BLAST of Sed0005065 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601335.1	2.6e-59	72.67	DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023511593.1	4.5e-59	72.67	DNL-type zinc finger protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022987077.1	7.6e-59	72.09	DNL-type zinc finger protein isoform X1 [Cucurbita maxima]	[more]
KAG7032119.1	9.9e-59	72.67	DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956509.1	3.8e-58	72.67	uncharacterized protein LOC111458229 isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0005065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5SXM8	7.0e-07	34.85	DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1	[more]
Q9D113	4.5e-06	34.85	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]
Q0IH40	5.9e-06	32.76	DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1	[more]
A1L1P7	5.0e-05	39.53	DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1	[more]

BLAST of Sed0005065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9C7	3.7e-59	72.09	DNL-type zinc finger protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484...	[more]
A0A6J1GZ90	1.8e-58	72.67	uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7SVJ1	3.1e-58	72.67	Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3BG31	3.1e-58	72.67	uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1GXZ4	9.1e-58	72.67	mitochondrial protein import protein ZIM17 isoform X2 OS=Cucurbita moschata OX=3...	[more]

BLAST of Sed0005065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68730.1	3.8e-32	53.10	Zim17-type zinc finger protein	[more]
AT5G27280.1	2.1e-14	48.15	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 108..155 e-value: 1.1E-15 score: 57.3
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 101..170 score: 14.696301
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 1..166
None	No IPR available	PANTHER	PTHR20922:SF19	F24J5.3	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005065.1	Sed0005065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding