Sed0005053 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCAAAAACCACCAATTCTTCAATAATCTTCTTCATCTCAAACTCCAAAAACACAACAAAATAGTACTAAATGAGTCCTGAGAAACCCAATTTGAGAGCTTTCGATCTCGCCACCGCCACTACCACCTCCGCCACAGGTGGAACGCAACCGAAAAAATCGTCGGAAAAGAACGTCAACAACTCGAAAGGCGACGCCGCCAGCTCCGATATGGGAAAGGCTTTGGCGCAGAGAGCAGTTTATGGATCTCAACCGTGGCGAAAAGGAAGAAGAAGAATCCTCATCCATGGCGCCCGGCTGCTTCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAATTCCTCAGCTTCTAATTAATTTTTTTTTATGTGTATAAAGTTGGTAAATATTGTTTGTCACTAAGTAATGTGA ATTTTCAAAAACCACCAATTCTTCAATAATCTTCTTCATCTCAAACTCCAAAAACACAACAAAATAGTACTAAATGAGTCCTGAGAAACCCAATTTGAGAGCTTTCGATCTCGCCACCGCCACTACCACCTCCGCCACAGGTGGAACGCAACCGAAAAAATCGTCGGAAAAGAACGTCAACAACTCGAAAGGCGACGCCGCCAGCTCCGATATGGGAAAGGCTTTGGCGCAGAGAGCAGTTTATGGATCTCAACCGTGGCGAAAAGGAAGAAGAAGAATCCTCATCCATGGCGCCCGGCTGCTTCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAATTCCTCAGCTTCTAATTAATTTTTTTTTATGTGTATAAAGTTGGTAAATATTGTTTGTCACTAAGTAATGTGA ATGAGTCCTGAGAAACCCAATTTGAGAGCTTTCGATCTCGCCACCGCCACTACCACCTCCGCCACAGGTGGAACGCAACCGAAAAAATCGTCGGAAAAGAACGTCAACAACTCGAAAGGCGACGCCGCCAGCTCCGATATGGGAAAGGCTTTGGCGCAGAGAGCAGTTTATGGATCTCAACCGTGGCGAAAAGGAAGAAGAAGAATCCTCATCCATGGCGCCCGGCTGCTTCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAATTCCTCAGCTTCTAATTAA MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSSASN Homology
BLAST of Sed0005053 vs. NCBI nr
Match: KAG6597562.1 (hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.0 bits (206), Expect = 7.8e-13 Identity = 53/94 (56.38%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Sed0005053 vs. NCBI nr
Match: KGN57150.1 (hypothetical protein Csa_011148 [Cucumis sativus]) HSP 1 Score: 70.9 bits (172), Expect = 6.8e-09 Identity = 56/106 (52.83%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Sed0005053 vs. NCBI nr
Match: KAA0049530.1 (hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK16208.1 hypothetical protein E5676_scaffold209G001370 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Sed0005053 vs. NCBI nr
Match: KAG2726969.1 (hypothetical protein I3760_01G138000 [Carya illinoinensis]) HSP 1 Score: 63.9 bits (154), Expect = 8.3e-07 Identity = 46/91 (50.55%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Sed0005053 vs. NCBI nr
Match: KAG6668024.1 (hypothetical protein CIPAW_01G142300 [Carya illinoinensis]) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of Sed0005053 vs. ExPASy TrEMBL
Match: A0A0A0L5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.3e-09 Identity = 56/106 (52.83%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Sed0005053 vs. ExPASy TrEMBL
Match: A0A5A7U2I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001370 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Sed0005053 vs. ExPASy TrEMBL
Match: A0A5C7IRA7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_000217 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.2e-05 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Sed0005053 vs. ExPASy TrEMBL
Match: A0A7J7CXR7 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01650 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.2e-04 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of Sed0005053 vs. ExPASy TrEMBL
Match: A0A5N5LPM7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012785 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.1e-04 Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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