Sed0004989 (gene) Chayote v1

Overview


Name	Sed0004989
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein Rab-2A
Location	LG08: 33436610 .. 33440192 (-)
RNA-Seq Expression	Sed0004989
Synteny	Sed0004989

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATATATATATACAGAAATTGGGAGCTCAAAGAAAGTCAGAGATTAGTAATTCCAATCCAACACGCAGTGCCGTCTTGTTGGAGCTCTGCAATTGAAACTCCTTCTTTACGGTTTCTCAATTTCTCCCCTTTTTTCTCCTGCCGATTCGCCATCTCCGGCCAAATCTCTTCGATTTCAACCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGCGACACTGGTACGTTTCGTTTCGGATCTGATTCCTGAATTAGGTCTTTTCGATTCTGAGTTGGTTTGAGTCTGTTGATCTTTGGATTGGATTTTGTTCTCTGTTTGTTCGATTGATGTGTTTTTTGCGAGTTTTTTGAAACTGAATTCTGCGTTTTCTTCAGGAGTTGGCAAATCGTGTCTTCTTCTCCAGTTTACTGACAAGAGGTTTCAGCCAGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCGAGGATGATCACTATCGATACCAAACCTATCAAGTTGCAAATTTGGGATACGGTTAGCCTTTTTTTTTTGTTTGTATGTTTATTTGGGGATTTATGGTTTATGAACTCTAGATATTTAATTGAAACTTCTCTATTGAATTGAATGAGTCCTATTCTGGTTTCTTGAACTATTACCATTTTAACTTTTCTATCTGTAATTGTGCTAGAGATAAGTAGATGTTCTGTTGTTACAAGGTTCAATCTTAATTCAAGTAAAGGCAAACAATAACCAACGTTTTGAAAGGCTAAAGGCGGCCTCGAGACTTTTCCTGGTAAAACATCACACCAACACTAATAGGATTGAGTTTTTTTTTGGAATAAGAAACAATCTCGTTGATGAATGAAATATAAGTGAATTCTTCAACCAATTAGTGAATACAAGGCGGTGCTCCAAAAGGAGATGCAAGAGGAAAATAAGCCAACAAATTATCAAAATTAAATTGTCGATACGATGAGAACCCTTATATTATAAAGAATGGAAAAAAACTAATACTATTCTTCCAGTAATTCTATGAGGCGTAGGGACTTTAAGTCTCAGTGCATTATCATAGAGGCATAAACCTCTTATGATCCAACACAGGCGTAAGATTCGAGGCTATAAGTTCCTCAAGCCGTAAGTCGCAATAGCCCTTTTAAAACATTGACAATAACTTATACAACCAGGAAACCTCCATTCATGCTTACTCTATAGAGTCTAGGTTGTTCTATGCGATAGTTTAGAGTAGTCTATCATTGTATCATGGCTTTGAATCTAGAACCCTTATCTATAATTCATGAAACACATATGAGCTTAGCATAAGTGTTCTGCTTAAACTTAGAGCACGCTTATATGACATAGAATACTTATTCGACCGATAATGGCACCATACTCAAACTTAATGTCTGCTTTGTGAGTAATAATGAGTGAATGACCATTGTTGATTTAACGTATTGTATTTCTCATTTCTATTACACATATATAACATAATCATGGTACAAATACTGGTTCCTTGTACTTTTAACTTAGATTTCTTTTTTGCTTTTGTTTCATATGAATTTTATCAAGTTTTTTTTCCAATTCTGAAGTTTACGAAAAATGCAACAGGCTGGTCAAGAATCTTTCAGATCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTACGACATCACTAGGTCTTGTTACGTTTTTGTTCCAGCCGCCCCCTCCTGAATTTATACTAGTACATTTGGATTTTGATGTAGGGATATATCTGTACTTTAAGTGATTTGGGTCGGTGCCTTATGTTGCCGTCCGTTCTTATCGTTAGGGACCTAATATTCAATCTATTAAAACAGTCATCTTGGAGTTAGCCAGAAGAGTTGAACAGAAAGGGTACTGGTTGGTGGAACTGACCAATGTGTTAGCCAGAAGCTGTTCACAGTAGAATTTTTGGTGATCGGCATTAAGTTTATATGAATACGTGATTCACAGTTGTGGTTTATTTTTACCTTAATTTTGCGAATAACTTGAGCAAGACCACACTCCTTAGTTTTTAAAATAATGCTGTCACTCGCGTTTCCCTACAGTTCTTATCTGAAGTTTGGGGTGATTCTACCTTCTAATCTAATTTGATGGACTGCATAAGCTGAAATGGGGCCTCGTACTTCAAATTTCTCAAGTCAATAAGGATGTTTCTTAAGGTTATGTGGCTATCATATTTTTCAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAGCATGCTAATGCAAACATGACGATAATGCTTATCGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACAGAGGAAGGAGAGGAATTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATAGTTATGAATTTCCTTTCATAAAGTTAAAAATTGGGCATTATTGATCTGTAAACTAAGAACATGAAATGAAGATAAGTTATAATATTTATCTATTTGATCCATTTTTCTCTCGCAATTTTTCTCATGGTGATTAATTTTTAGCAGGCATTCATAAAAACTGCCGCAACCATATATAAGAAGATCCAAGATGGAGTGTTTGATGTATCTAATGAGGTATGTAGTATGCCTTCACTTTATTGCTACATGCGTTAGGTTAATACAATTAAATTTACCCTAATCCATTAGTTTAAGTTTTTGGCTTGATTGATGATTTAACATGTTTCAGCACGAGAGTAGGAGGTTATGAGTGTGAAGTCGTTTCATCTCTAATTAAAATTGATTTTGACTTGTTGGGCAGTCATTAATTTCCACCAATTAAAATTGATTTTCACTCGTTCGACATTTTCCCAAATTTTCAACCCTACGAGTGAGGGAGAGTTTTGGTTGATATAATTAATATTATCGCAACCCATTAGCTTAAACTTTTGAGATGATTGATAATCCAACATGTTTCAACCAAATGTTTGGTTTTATTACTTTCGACTGGGTGTCAAAATTATTAAGCTCGAGTCGCCGGTGTTTGACCAATGACGTTTAGCCATGTGGATAGGACTATGAGAGAATCTGAAGTCTGGTGCTTGGTTTTTGTTTTAAACCTGGATAAATAGGGATGAGAATGATGCAATTGATAATATGTTTTATCTTATGTGCAGTCACATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGTCATCTGAAGGCAGAGATGGTGCTACAGCTCAATCTGGGGGTTGTTGCAGTTAAATCTTGTACAAACTTTGACCTTCTCTTTAAATTTCTTTATTAATTGTGTGTGTCAAATCCCCTCAACAAAAAAGGAAAAAGAAAACCATAATAGGTGAATAGGTAATTGTACGATCATTTGATGTGTTATGTTTTTTGTTTTTTTTTTAAATAATAATTATGTCTTGATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTGTTCGTGACAAAACTGTATCCTACTTTTATATTGATTGGTATATAATTCCTACCGGAGTTTATGTCAATGTTTATGATATTTAACGAGATTGATTAGTA

mRNA sequence

TATATATATATATATACAGAAATTGGGAGCTCAAAGAAAGTCAGAGATTAGTAATTCCAATCCAACACGCAGTGCCGTCTTGTTGGAGCTCTGCAATTGAAACTCCTTCTTTACGGTTTCTCAATTTCTCCCCTTTTTTCTCCTGCCGATTCGCCATCTCCGGCCAAATCTCTTCGATTTCAACCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGCGACACTGGAGTTGGCAAATCGTGTCTTCTTCTCCAGTTTACTGACAAGAGGTTTCAGCCAGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCGAGGATGATCACTATCGATACCAAACCTATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGATCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTACGACATCACTAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAGCATGCTAATGCAAACATGACGATAATGCTTATCGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACAGAGGAAGGAGAGGAATTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCCGCAACCATATATAAGAAGATCCAAGATGGAGTGTTTGATGTATCTAATGAGTCACATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGTCATCTGAAGGCAGAGATGGTGCTACAGCTCAATCTGGGGGTTGTTGCAGTTAAATCTTGTACAAACTTTGACCTTCTCTTTAAATTTCTTTATTAATTGTGTGTGTCAAATCCCCTCAACAAAAAAGGAAAAAGAAAACCATAATAGGTGAATAGGTAATTGTACGATCATTTGATGTGTTATGTTTTTTGTTTTTTTTTTAAATAATAATTATGTCTTGATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTGTTCGTGACAAAACTGTATCCTACTTTTATATTGATTGGTATATAATTCCTACCGGAGTTTATGTCAATGTTTATGATATTTAACGAGATTGATTAGTA

Coding sequence (CDS)

ATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGCGACACTGGAGTTGGCAAATCGTGTCTTCTTCTCCAGTTTACTGACAAGAGGTTTCAGCCAGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCGAGGATGATCACTATCGATACCAAACCTATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGATCTATTACAAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTACGACATCACTAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAGCATGCTAATGCAAACATGACGATAATGCTTATCGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACAGAGGAAGGAGAGGAATTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCCGCAACCATATATAAGAAGATCCAAGATGGAGTGTTTGATGTATCTAATGAGTCACATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGTCATCTGAAGGCAGAGATGGTGCTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESHGIKVGYGGIPGSSEGRDGATAQSGGCCS

Homology

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BLAST of Sed0004989 vs. NCBI nr
Match: XP_004139512.1 (ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-related protein RABB1c [Cucumis melo] >KGN64986.1 hypothetical protein Csa_022843 [Cucumis sativus])

HSP 1 Score: 414.5 bits (1064), Expect = 5.6e-112
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGATAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

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BLAST of Sed0004989 vs. NCBI nr
Match: XP_031397460.1 (ras-related protein RABB1c [Punica granatum] >OWM85666.1 hypothetical protein CDL15_Pgr029089 [Punica granatum])

HSP 1 Score: 413.7 bits (1062), Expect = 9.6e-112
Identity = 205/211 (97.16%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGAT+QSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

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BLAST of Sed0004989 vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 211

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BLAST of Sed0004989 vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 410.6 bits (1054), Expect = 8.1e-111
Identity = 203/210 (96.67%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES+GIKVGYGGIPG S GRDG TAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

[Close]

BLAST of Sed0004989 vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410.6 bits (1054), Expect = 8.1e-111
Identity = 203/210 (96.67%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES+GIKVGYGGIPG S GRDG TAQSGGCC
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

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BLAST of Sed0004989 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-113
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES+GIKVGYGGIPG S GRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Sed0004989 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 4.8e-106
Identity = 191/211 (90.52%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGE+FAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGY  IPG S G   +++Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of Sed0004989 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 381.7 bits (979), Expect = 5.3e-105
Identity = 191/211 (90.52%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGE+FAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGY  +PG S G  G+++Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]

BLAST of Sed0004989 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.6e-101
Identity = 179/210 (85.24%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG++FAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES GIK+GYG   G++ GRDG  +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Sed0004989 vs. ExPASy Swiss-Prot
Match: Q39570 (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.4e-99
Identity = 182/213 (85.45%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGE+FAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGG---IPGSSEGRDGATAQSGGCC 211
           ES+GIKVGYGG    P + +  +G  A+S  CC
Sbjct: 181 ESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213

[Close]

BLAST of Sed0004989 vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGATAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Sed0004989 vs. ExPASy TrEMBL
Match: A0A1S3CLK8 (ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGATAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Sed0004989 vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-112
Identity = 205/211 (97.16%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGAT+QSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

[Close]

BLAST of Sed0004989 vs. ExPASy TrEMBL
Match: A0A498IWT0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011839 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.9e-111
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGA++Q+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGASSQAGGCCS 211

[Close]

BLAST of Sed0004989 vs. ExPASy TrEMBL
Match: A0A540M0P8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_022216 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.9e-111
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
           ES+GIKVGYGGIPG S GRDGA++Q+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGASSQAGGCCS 211

[Close]

BLAST of Sed0004989 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-114
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGE+FAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES+GIKVGYGGIPG S GRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Sed0004989 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-102
Identity = 179/210 (85.24%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG++FAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           ES GIK+GYG   G++ GRDG  +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Sed0004989 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 324.7 bits (831), Expect = 5.5e-89
Identity = 164/211 (77.73%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGE+FA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESHGIKVGYGGIPGSSEGRDGATAQS-GGCC 211
           E        G  PG   G+D +++Q   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of Sed0004989 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-74
Identity = 134/164 (81.71%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 47  MITIDTKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 166
           HAN NM+IMLIGNKCDLAH+RAVS EEG++FAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNESHGIKVGYGGIPGSSEGRDGATAQSGGCC 211
           I + IQDGVFDVSNES GIK+GYG   G++ GRDG  +Q GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of Sed0004989 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-50
Identity = 100/209 (47.85%), Postives = 132/209 (63.16%), Query Frame = 0


Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDTKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H +AN+ IM +GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 123 LAHRRAVSTEEGEEFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
           L H RAVSTE+ + FA+     FME SA  + NVE AF +  + IY+ +     D+ ++ 
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189

Query: 183 HGIKVGYGGIPGSSEGRDGATAQSGGCCS 212
             +  G     GS +  D +  +  GCCS
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCS 216

The following BLAST results are available for this feature:

BLAST of Sed0004989 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139512.1	5.6e-112	97.63	ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-rela...	[more]
XP_031397460.1	9.6e-112	97.16	ras-related protein RABB1c [Punica granatum] >OWM85666.1 hypothetical protein CD...	[more]
XP_038893942.1	1.6e-111	97.16	ras-related protein RABB1c isoform X2 [Benincasa hispida]	[more]
KAG7019338.1	8.1e-111	96.67	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927533.1	8.1e-111	96.67	ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p...	[more]

BLAST of Sed0004989 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	2.4e-113	96.19	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	4.8e-106	90.52	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	5.3e-105	90.52	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	1.6e-101	85.24	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
Q39570	4.4e-99	85.45	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=...	[more]

BLAST of Sed0004989 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYF8	2.7e-112	97.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1	[more]
A0A1S3CLK8	2.7e-112	97.63	ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1	[more]
A0A218XLU8	4.7e-112	97.16	ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1	[more]
A0A498IWT0	3.9e-111	96.21	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011839 PE=4 SV=1	[more]
A0A540M0P8	3.9e-111	96.21	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_022216 PE=4 SV=1	[more]

BLAST of Sed0004989 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	1.7e-114	96.19	RAB GTPase homolog B1C	[more]
AT4G35860.1	1.1e-102	85.24	GTP-binding 2	[more]
AT4G17160.1	5.5e-89	77.73	RAB GTPase homolog B1A	[more]
AT4G35860.2	1.3e-74	81.71	GTP-binding 2	[more]
AT5G60860.1	2.9e-50	47.85	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 7..28 score: 51.86 coord: 110..123 score: 49.81 coord: 145..167 score: 44.01 coord: 48..70 score: 53.24 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 9.8E-106 score: 367.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 4.8E-37 score: 139.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 3.2E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..211
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 36.185883
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.749252
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 7.63982E-130 score: 360.585
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 7.2E-12 score: 32.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 1.7E-62 score: 209.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..211 score: 19.621431
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 7.3E-33 score: 111.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..184 e-value: 3.2E-71 score: 240.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004989.1	Sed0004989.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding