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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGCCAATGAAATATTAGATATAAAGTCAGTAACCATTGATATGGAAGAAGGATTAGTCAAAGTCATTTCAAAATCTCAGATTGACCCATCAACCATCGTCAAATCCATAGCAAAAATCGGCAAATTAGCACACATTCAGCCACCGCCGCCGCCGGCTCCGGCGCCGTCCCCCGCCGTATCCATGGATTCCGGTCACCGGAACATTTCTTCTGGCAATTCAGACGGTCATCACCACAGGACCAATAGCAGCAATCCCGGCTCCGGCCAATTTTGGTCCGGCGGCGTCCACATCGACGAGGCGGCCACGGCCGTCCCGCCGGTGGCACTGCCTCGCCCGAACTTGTATATGGGAGGTGCTGGTTGTAGTCGAAACCGGAGTTTTTGGCGGCAAACGTCGGATCCGCTGCCGGAGAGGTATAATCGGTGGCCGGAGCCGGCTCCTTATCATTGGCAACCACAATTTCCACCGCCGGAGAATGCACTGTGGAACCCTTATTGGAGGTCGTCGGAGCCGCCGCCGCCACCATACTATTATCAACAGCCACCGTCACAGATGGGAAATGCTCCGGGGCGTTACATGCTTAACGATGAGAATGTAAATGGATGTAAGATTGTTTAG mRNA sequence ATGGTGGCCAATGAAATATTAGATATAAAGTCAGTAACCATTGATATGGAAGAAGGATTAGTCAAAGTCATTTCAAAATCTCAGATTGACCCATCAACCATCGTCAAATCCATAGCAAAAATCGGCAAATTAGCACACATTCAGCCACCGCCGCCGCCGGCTCCGGCGCCGTCCCCCGCCGTATCCATGGATTCCGGTCACCGGAACATTTCTTCTGGCAATTCAGACGGTCATCACCACAGGACCAATAGCAGCAATCCCGGCTCCGGCCAATTTTGGTCCGGCGGCGTCCACATCGACGAGGCGGCCACGGCCGTCCCGCCGGTGGCACTGCCTCGCCCGAACTTGTATATGGGAGGTGCTGGTTGTAGTCGAAACCGGAGTTTTTGGCGGCAAACGTCGGATCCGCTGCCGGAGAGGTATAATCGGTGGCCGGAGCCGGCTCCTTATCATTGGCAACCACAATTTCCACCGCCGGAGAATGCACTGTGGAACCCTTATTGGAGGTCGTCGGAGCCGCCGCCGCCACCATACTATTATCAACAGCCACCGTCACAGATGGGAAATGCTCCGGGGCGTTACATGCTTAACGATGAGAATGTAAATGGATGTAAGATTGTTTAG Coding sequence (CDS) ATGGTGGCCAATGAAATATTAGATATAAAGTCAGTAACCATTGATATGGAAGAAGGATTAGTCAAAGTCATTTCAAAATCTCAGATTGACCCATCAACCATCGTCAAATCCATAGCAAAAATCGGCAAATTAGCACACATTCAGCCACCGCCGCCGCCGGCTCCGGCGCCGTCCCCCGCCGTATCCATGGATTCCGGTCACCGGAACATTTCTTCTGGCAATTCAGACGGTCATCACCACAGGACCAATAGCAGCAATCCCGGCTCCGGCCAATTTTGGTCCGGCGGCGTCCACATCGACGAGGCGGCCACGGCCGTCCCGCCGGTGGCACTGCCTCGCCCGAACTTGTATATGGGAGGTGCTGGTTGTAGTCGAAACCGGAGTTTTTGGCGGCAAACGTCGGATCCGCTGCCGGAGAGGTATAATCGGTGGCCGGAGCCGGCTCCTTATCATTGGCAACCACAATTTCCACCGCCGGAGAATGCACTGTGGAACCCTTATTGGAGGTCGTCGGAGCCGCCGCCGCCACCATACTATTATCAACAGCCACCGTCACAGATGGGAAATGCTCCGGGGCGTTACATGCTTAACGATGAGAATGTAAATGGATGTAAGATTGTTTAG Protein sequence MVANEILDIKSVTIDMEEGLVKVISKSQIDPSTIVKSIAKIGKLAHIQPPPPPAPAPSPAVSMDSGHRNISSGNSDGHHHRTNSSNPGSGQFWSGGVHIDEAATAVPPVALPRPNLYMGGAGCSRNRSFWRQTSDPLPERYNRWPEPAPYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNAPGRYMLNDENVNGCKIV
Homology
BLAST of Sed0004952 vs. NCBI nr
Match: KAG6593135.1 (hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.2 bits (313), Expect = 6.7e-25 Identity = 92/221 (41.63%), Postives = 124/221 (56.11%), Query Frame = 0
Query: 1 MVANEILDIKSVTIDMEEGLVKVISKSQIDPSTIVKSIAKIGKLAHIQPPPPPAPAPSPA 60
M ANE D+KSV ID+++GLV + + DP TIV+++++ GKLA +QP APAP+ +
Sbjct: 1 MAANE--DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYAAPAPAAS 60
Query: 61 VSM-DSGHRNISSGNSDGHHHR---TNSSNPGSGQFWSGGVHIDEAATAVPPVALP---- 120
++ DS H NI S SD H ++ T + PGS + VH +EAA AVPPV +P
Sbjct: 61 AAVRDSVHPNIPSAASDPHCNKIDWTQNCVPGSSK-----VHFNEAAGAVPPVDVPYRHR 120
Query: 121 ---RPNLYMGGAGCSRNRSFWRQTSDPLPERYNRWPEPAPYHWQPQFPPPENALWNPYWR 180
RP GG G +R F R +PLP+ P P P PP + Y+R
Sbjct: 121 LSLRPGSQFGGVGHDASRGFGRPMMEPLPQPL---PPAMPPAMPPAMPPGDG-----YYR 180
Query: 181 SSEPPPPPYYYQQ---PPSQMGNAPGRYMLNDENVNGCKIV 208
SE PPPYY+QQ P + APG Y+ NDENV+ CKI+
Sbjct: 181 WSE--PPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 204
BLAST of Sed0004952 vs. NCBI nr
Match: KAA0057596.1 (hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 9.1e-14 Identity = 85/257 (33.07%), Postives = 112/257 (43.58%), Query Frame = 0
Query: 1 MVANEILDIKSVTIDMEEGLVKVISKSQIDPSTIVKSIAKIGKLAHIQPPPPPAPAP--- 60
M +NE + SV ++++ GLVK+ +S DPS VK+IAK GK A APAP
Sbjct: 1 MASNE--GVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPT 60
Query: 61 ------------------SPAVSMD--SGH--RNISSGNSDGH----HHRTNSSNPGSGQ 120
+PA + D SGH RN +S NS+ H T+ N +G
Sbjct: 61 ATPIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGN 120
Query: 121 F-----WSGGVHIDEAATAVPPVALPRPN-LYM---------------GGAGCSRNRSFW 180
F S VHI+EAA PPV LP PN ++M G + FW
Sbjct: 121 FSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFW 180
Query: 181 RQTSDPLPERYNRWPEPAPYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNA 208
S+P W +P PPP A+ P+ P P PYY Q+ +GN
Sbjct: 181 PGMSEP-------WSSASPP------PPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNT 240
BLAST of Sed0004952 vs. NCBI nr
Match: TYK20998.1 (hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06 Identity = 59/179 (32.96%), Postives = 76/179 (42.46%), Query Frame = 0
Query: 56 APSPAVSMDSGH--RNISSGNSDGH----HHRTNSSNPGSGQF-----WSGGVHIDEAAT 115
AP+ SGH RN +S NS+ H T+ N +G F S VHI+EAA
Sbjct: 4 APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63
Query: 116 AVPPVALPRPN-LYM---------------GGAGCSRNRSFWRQTSDPLPERYNRWPEPA 175
PPV LP PN ++M G + FW S+P W +
Sbjct: 64 VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEP-------WSSAS 123
Query: 176 PYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNAPGRYMLNDENVNGCKIV 208
P PPP A+ P+ P P PYY Q+ +GN P Y+ NDEN GC I+
Sbjct: 124 PP------PPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
BLAST of Sed0004952 vs. NCBI nr
Match: KGN45423.2 (hypothetical protein Csa_015802, partial [Cucumis sativus]) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-04 Identity = 55/173 (31.79%), Postives = 72/173 (41.62%), Query Frame = 0
Query: 54 APAPSPAVSMDSGHRNISSGNSDGHHHRTNSS--------NPGSGQF-----WSGGVHID 113
APAP+PA + +SG+ H H NS+ N +G F W VHI+
Sbjct: 25 APAPAPAATSSDN----ASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHIN 84
Query: 114 EAATAVPPVALPRPNLYMGGAGCSRNRSFWRQTSDPLPERYNR----------WPEPAPY 173
EAA+ PPVALP N + R P P +Y WP +
Sbjct: 85 EAASVNPPVALPLHNRML-------MRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEP 144
Query: 174 HWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNAPGRYMLNDENVNG 204
P PPP ++ + W P P PYY Q+ +GN P Y+ NDEN G
Sbjct: 145 WSSPSHPPPPHSYYR--W----PEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 180
BLAST of Sed0004952 vs. ExPASy TrEMBL
Match: A0A5A7UTY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00730 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 4.4e-14 Identity = 85/257 (33.07%), Postives = 112/257 (43.58%), Query Frame = 0
Query: 1 MVANEILDIKSVTIDMEEGLVKVISKSQIDPSTIVKSIAKIGKLAHIQPPPPPAPAP--- 60
M +NE + SV ++++ GLVK+ +S DPS VK+IAK GK A APAP
Sbjct: 1 MASNE--GVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPT 60
Query: 61 ------------------SPAVSMD--SGH--RNISSGNSDGH----HHRTNSSNPGSGQ 120
+PA + D SGH RN +S NS+ H T+ N +G
Sbjct: 61 ATPIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGN 120
Query: 121 F-----WSGGVHIDEAATAVPPVALPRPN-LYM---------------GGAGCSRNRSFW 180
F S VHI+EAA PPV LP PN ++M G + FW
Sbjct: 121 FSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFW 180
Query: 181 RQTSDPLPERYNRWPEPAPYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNA 208
S+P W +P PPP A+ P+ P P PYY Q+ +GN
Sbjct: 181 PGMSEP-------WSSASPP------PPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNT 240
BLAST of Sed0004952 vs. ExPASy TrEMBL
Match: A0A0A0K5U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.5e-11 Identity = 79/250 (31.60%), Postives = 105/250 (42.00%), Query Frame = 0
Query: 1 MVANEILDIKSVTIDMEEGLVKVISKSQIDPSTIVKSIAKIGKLAHI------------- 60
M +NE + SV +++E GLVK+ + DP +K+I K GK A
Sbjct: 1 MASNE--GVTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTAAPSPIA 60
Query: 61 QPPPPP-------APAPSPAVSMDSGHRNISSGNSDGHHHRTNSS--------NPGSGQF 120
Q P P APAP+PA + +SG+ H H NS+ N +G F
Sbjct: 61 QNPQFPTKENMTSAPAPAPAATSSDN----ASGHPIHHSHSINSNNHCCKSDGNSDAGNF 120
Query: 121 -----WSGGVHIDEAATAVPPVALPRPNLYMGGAGCSRNRSFWRQTSDPLPERYNR---- 180
W VHI+EAA+ PPVALP N + R P P +Y
Sbjct: 121 SDHRSWPDKVHINEAASVNPPVALPLHNRML-------MRPPMPSLRPPPPPQYGDHMGF 180
Query: 181 ------WPEPAPYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNAPGRYMLN 208
WP + P PPP ++ + W P P PYY Q+ +GN P Y+ N
Sbjct: 181 RGSHGFWPGMSEPWSSPSHPPPPHSYYR--W----PEPVPYYLQEQQPPVGNTPNHYVFN 231
BLAST of Sed0004952 vs. ExPASy TrEMBL
Match: A0A5D3DBX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00250 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 6.8e-07 Identity = 59/179 (32.96%), Postives = 76/179 (42.46%), Query Frame = 0
Query: 56 APSPAVSMDSGH--RNISSGNSDGH----HHRTNSSNPGSGQF-----WSGGVHIDEAAT 115
AP+ SGH RN +S NS+ H T+ N +G F S VHI+EAA
Sbjct: 4 APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63
Query: 116 AVPPVALPRPN-LYM---------------GGAGCSRNRSFWRQTSDPLPERYNRWPEPA 175
PPV LP PN ++M G + FW S+P W +
Sbjct: 64 VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEP-------WSSAS 123
Query: 176 PYHWQPQFPPPENALWNPYWRSSEPPPPPYYYQQPPSQMGNAPGRYMLNDENVNGCKIV 208
P PPP A+ P+ P P PYY Q+ +GN P Y+ NDEN GC I+
Sbjct: 124 PP------PPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6593135.1 | 6.7e-25 | 41.63 | hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0057596.1 | 9.1e-14 | 33.07 | hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa] | [more] |
| TYK20998.1 | 1.4e-06 | 32.96 | hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa] | [more] |
| KGN45423.2 | 1.3e-04 | 31.79 | hypothetical protein Csa_015802, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UTY4 | 4.4e-14 | 33.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0K5U2 | 4.5e-11 | 31.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1 | [more] |
| A0A5D3DBX5 | 6.8e-07 | 32.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 64..92 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 45..95 |
| IPR006121 | Heavy metal-associated domain, HMA | CDD | cd00371 | HMA | coord: 9..46
e-value: 0.00569145
score: 32.1925 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
|
