Sed0004951 (gene) Chayote v1

Overview


Name	Sed0004951
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein CHLOROPLAST IMPORT APPARATUS 2
Location	LG11: 6360824 .. 6365486 (-)
RNA-Seq Expression	Sed0004951
Synteny	Sed0004951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTGTCTTGTGTTCTCTTCTATCTAGTAATCTCCATCGCTCAACTCCATAAACACTCACAGAAGAAAGAGAGAGATAAATTCTTTGTTTCTCTCTACAGAAATTCCTATATGTACACAACGGATCTTTCCTCTTTCCCTTTTATCTCTCAACCTCGTGACTTTCTTCTCTGTTCTTCATGTTCCCATCTCCCTCTCTCTGTTTTTTGGGATTTACAGATTGTGTTTACTTTTAGAAATCAGAGAGTTTGTTATATTTGTTGGGTTTTGTTTAGTGGAGATTTCCAATTTCCCATTTCCATGGAAGTTCCAAATTCCTCTGGTTTTCTTGGGGCAAGAGAGATAGATATTAGGTAATAAGAACAGAGGGAAAAGGGGTTTTGGTTTCTGTTGGATTTTTCTTTTCTTATCTCTTTTTGGTGAGTTCTTCCGTACTATATTCCCTTTTGATTGAAGGGGTTTTGTTTTTGTCTGAGAGTTCATTGCTAGGGTTGAAGGGTTTATCCAATTTTCCACGTTTCTGATAGAATTGGGATTTCCTTGAAATTTTCTTGGCAACCAAACAGAATTTACAGAGCTTTTGTTGTTGTTCTAAATCTCTAATGTCTTCTCCATGTATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTAGAAATTATAAAATCTCCATCATCATCATCATCATGGATGATAGGTTCTCAAACATCATCCCCTTCCTCAACTCTATCTGAATCAAGCAACAATTCACAGATAGCAATTTCAACAAGAAAATCTCGAGCACCTAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTCTCTACAGCCTATCCCAATGTTTTCTCCACCAAACACCTCACAAATCCACGAAAATTCACCAAATCACAAGAATCATCCATGTTCTGTGATTCATCCGAATTGCTGTTGCCGTTTCGAGTAATCGACAGCTCTGGATTCCTCCTCCACCAGCCGCTCCTACAAGAAAAACCTAATTCCCAAATCCAATCAAAATTGGCCAATCTGTGGGAGAATCGGCCATGTTCGAGCCCAGGAGAGATCTATTTCCAACCGAATCCGATCCAGATGGAGGATTTCGACGCCGAATCGATCCTCGATGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTAAGCGTGGAAAGATTAGAAACAGCTAATTCAGCAAATTCAGCGCAGGATTCATGTGCTAACCCTAGAAATTGGAATTGTTACTGGAATCCAATCGGATTAGGTTTCAATCAGAAATTCGAATTCGAACGAGCAGCGATTCGACAAGTCGACAACGGAAACTGGTGGCGATTTCCGACTGTCGACGTTGTCGAGATCTCTCCTACACTAAATCCGAAGCCGCCGGCAGTGGTACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAAGTGGAGAAACTCACAGTGATTGAATCGAAGAAAGGCGCCGCCGCAAAAGCGCCGCCGCAGAAGGCGGCGATTCCGAAATCGAAACCGCCTGGATTGATTCTGAAACTGAACTATGAAGGCGTCGCCGCCGCTTGGTCCGACAGAGGATCTCCATTTTCCGACGAGATTCCGGGATCGGAAACGGCGGGAAGTGATGTTAATGTACGTTTCCCATCCCGCTCCCGAAAATCAAAACCCAACAAACTCTGAACCAACCAAAAAAAAAAATCTCAGGAATCCAAATAATATTTTTAGTTTTTTTTTAATTCAAATAATCTTTTTAGTTTTTAGTTTTTTTTTAAATGAAATAATCATTTTAGTTATCGGTTGTTAGTGCTCCATTTTTAGTCCTTTTGTTTTCTACCATTTTTTCCCTATAGTTTTACTATTTTTGTTTAAGCTATAATCTTTTTAAAAATTTATTTGCCATTTTTATTCATAGAGGATTCGAAACGGTAAACTCTTCGTTCATAAGTTGTACTTCATGGTGTTAGAATTTTTTCTGTTGGCTAAATCTATTTTTCCATTAATCATTAACATTTATTTTTGAGAATGTCATTAACACTTTTTTAAACTTAGACATTAATCTTTAAAAATTTCATGTACAAAAAAGTCACGTGTCACGCAAGAAAAGTGTTAATATGTCTAGATAAAAAGATTTTAAAAAAATTTTATAAAACATTTCTAAACTATAGAAACTAAAATAGAAGCACCAATGTAACTTTTATCCCCTAAAACAAAAGCTATCATTATTTTTGTAATGTCATACTATTTGTAGCATTGAGATTTGTGAGACAAAAGATTCTCTTCAAAAATATGGTGAGACAAAGATGTAGAAATTAAAAAGTTCCAACATTTTTCTTGAAAATTAATATAATTTTTATTATTTTCAACTGCTTTTATTTAGACCATTAATATCACTTTTCTCATGAAAAAAAATATCTAAATGGAAGCTTTAAAAAAAGTACTAATAATAACTACGGTGTTCAATCACGAGAGTCTCCACTAAAAAGGAGGGCAATATTGTAAATTTGAAACTGTTTTTTATTGATAATACACAAATGAAAACGAAAAATGGATTGATTTTAAGTGAAATGACAGAGTTGTCCTTGTTTGTGGAGTAGTAAAAACTAAAGTGAGGGGTATTTTTGGAAATTGGCAGGCCAGGGTGGCCCAGATTGATTTATTTATGGACGGTGGAGGATTGTTGAGAGAAGCCAGTGTGTTACGCTACAAGGAGAAAAGGCGGAGCCGCTTGTTCTCGAAGAAGATCAGATACCAAGTCAGAAAAGTCAATGCAGATGGACGGCCCAGGATGAAGGTACGTATGTGAATCTGGTACATCCACCCTCACCTGATTCTAGCTTCTTCTTCTTTCTTTCTATTATAGAAATGAATATACTACGACTAGATTCTATTCTTATTAAAAAATTGAGTAATGAATTCACCTAGAAAATGACATTTTTTGGTTTAGTTTTTTTGTTATTAACTCACTAGAATAATCATGAAGTTGATACAATTAATGACATGGAAATGGTCGTATTACTATATTATAGGTTAAATATATGTTTTTCGTTCCTTTTATTAAATTTAATGATGTTGGAGTTGAAAGTTTGAATGCTAGGTACAATATCTTAATTAATTGATTTCCTTTTAAAAAAATCTTAATTAATTGAATGATGTCTATATATATAGTTTACTACCTATAATTTTCAAATGATTGTTTATTTCAATTGAGTGTATGTTACTTAAAAAAAATCACTTTGTCTTGTAGGAGATTTTTTTTAAGGCTTTTAGGGTTTAGGGTTTAGGGAGATTGAATTGAAACGTTTAAAACATTCTATGAAATTTTAAAAATATCGAACAAGAACATAATTTTTTTTTTTTTGAAAACAAACCTTTCGATCGGGCTAAGGTCTAAGAAAATAATTAAAATAAATTTAAATAACCAAAGTAAATTCAAGATCTCGCAAGACCAAAATTTGAAACAAGTCGTGAGTTTTTATTTCTTATTTATATTGCTTAACAAAAAACATAGAGTTGGACTTTATTTATTAGTCGTTTAAGAGGATAAAAGCAAAAGCAACATTATTATAAGGCCTTCTTCAAAATATCATAGATAGATTCATTAGTATAAGTTAATTTAGTAATTAAAAATACTTTAAAGAACTAAGAGAAATAAATCTTCTTTTTTTTTTGAAAAAAGAAATAAATCTAATTTGTACTAAACAAAATAAATCTAATTTATAACGTAAGTAGTTTTTTTTTTTTGAAAAAACGTAAGTAGTATTCTATATTTTTTAACAATAAATTTAATAAAATTAAATTGTTGTAACATTAATAGAGATCGGCCTAACTTAGTCTAAACATGCACTTATATAAAACAACCACCGTGTCACTTTATTGGCAACACTCGAATACATAACTTGTTAAAACTTTTTTTTAGTACAGGGGAAGCGGGATAACAAATACCGATTACAAAGATTGAACAAGTGACTATGGAGTAAAAATGGATTAACACCAAAGCAGATAACCAATTACGTCATCAATCCATTTGGTCATAATTTACTAAAACCTAAACAGAGGATACATGCACTTTTAAAACTTTTGAAACACCATGTGGATAAACTTTATAAACCACAAATGATATTTGACCACAATAATTGCCATCATGATACTTTTACATTAAATTTTCATTGAATTAACTATACCATAGATGTTGTATACATGTAAATAAAATTCAACAGGGACGAAGACAATACATCTATTGATATGAAAGTTTCTTATTATATACATGCAGTATTTTTTTACGATTTTACTTAACGCTAAAGTATTATAAAATCAAACACGTAACTTGATTTAACACTTATGAATATAAAAAAAGAAATGGAGTATTAATATAGTTATTTAAAATAAAATTGAGTATTAATTTGAGTGAATTTTTGTTGTTAAAATTTGGGTGAGTGAAAAGACATTGTTGTTTTGGCAGGGGCGATTTGTGAGGAGACCTAATTCAAGCGCCCGCGAATAGACGATAGCCTTTTTGAGTTGTCAGCTTTCACTTTTTTTGGAGGACCTACTTTTTACTTTCTTCTATTCATTATTATTTTCCACTTATTTTTTTCCTTTTCTCCCCATTTTCCATTATAGTTTCTCTTTTTGTTAAATTACAATTTTGCTCTCCC

mRNA sequence

GTCTTGTCTTGTGTTCTCTTCTATCTAGTAATCTCCATCGCTCAACTCCATAAACACTCACAGAAGAAAGAGAGAGATAAATTCTTTGTTTCTCTCTACAGAAATTCCTATATGTACACAACGGATCTTTCCTCTTTCCCTTTTATCTCTCAACCTCGTGACTTTCTTCTCTGTTCTTCATGTTCCCATCTCCCTCTCTCTGTTTTTTGGGATTTACAGATTGTGTTTACTTTTAGAAATCAGAGAGTTTGTTATATTTGTTGGGTTTTGTTTAGTGGAGATTTCCAATTTCCCATTTCCATGGAAGTTCCAAATTCCTCTGGTTTTCTTGGGGCAAGAGAGATAGATATTAGGTAATAAGAACAGAGGGAAAAGGGGTTTTGGTTTCTGTTGGATTTTTCTTTTCTTATCTCTTTTTGGTGAGTTCTTCCGTACTATATTCCCTTTTGATTGAAGGGGTTTTGTTTTTGTCTGAGAGTTCATTGCTAGGGTTGAAGGGTTTATCCAATTTTCCACGTTTCTGATAGAATTGGGATTTCCTTGAAATTTTCTTGGCAACCAAACAGAATTTACAGAGCTTTTGTTGTTGTTCTAAATCTCTAATGTCTTCTCCATGTATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTAGAAATTATAAAATCTCCATCATCATCATCATCATGGATGATAGGTTCTCAAACATCATCCCCTTCCTCAACTCTATCTGAATCAAGCAACAATTCACAGATAGCAATTTCAACAAGAAAATCTCGAGCACCTAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTCTCTACAGCCTATCCCAATGTTTTCTCCACCAAACACCTCACAAATCCACGAAAATTCACCAAATCACAAGAATCATCCATGTTCTGTGATTCATCCGAATTGCTGTTGCCGTTTCGAGTAATCGACAGCTCTGGATTCCTCCTCCACCAGCCGCTCCTACAAGAAAAACCTAATTCCCAAATCCAATCAAAATTGGCCAATCTGTGGGAGAATCGGCCATGTTCGAGCCCAGGAGAGATCTATTTCCAACCGAATCCGATCCAGATGGAGGATTTCGACGCCGAATCGATCCTCGATGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTAAGCGTGGAAAGATTAGAAACAGCTAATTCAGCAAATTCAGCGCAGGATTCATGTGCTAACCCTAGAAATTGGAATTGTTACTGGAATCCAATCGGATTAGGTTTCAATCAGAAATTCGAATTCGAACGAGCAGCGATTCGACAAGTCGACAACGGAAACTGGTGGCGATTTCCGACTGTCGACGTTGTCGAGATCTCTCCTACACTAAATCCGAAGCCGCCGGCAGTGGTACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAAGTGGAGAAACTCACAGTGATTGAATCGAAGAAAGGCGCCGCCGCAAAAGCGCCGCCGCAGAAGGCGGCGATTCCGAAATCGAAACCGCCTGGATTGATTCTGAAACTGAACTATGAAGGCGTCGCCGCCGCTTGGTCCGACAGAGGATCTCCATTTTCCGACGAGATTCCGGGATCGGAAACGGCGGGAAGTGATGTTAATGCCAGGGTGGCCCAGATTGATTTATTTATGGACGGTGGAGGATTGTTGAGAGAAGCCAGTGTGTTACGCTACAAGGAGAAAAGGCGGAGCCGCTTGTTCTCGAAGAAGATCAGATACCAAGTCAGAAAAGTCAATGCAGATGGACGGCCCAGGATGAAGGGGCGATTTGTGAGGAGACCTAATTCAAGCGCCCGCGAATAGACGATAGCCTTTTTGAGTTGTCAGCTTTCACTTTTTTTGGAGGACCTACTTTTTACTTTCTTCTATTCATTATTATTTTCCACTTATTTTTTTCCTTTTCTCCCCATTTTCCATTATAGTTTCTCTTTTTGTTAAATTACAATTTTGCTCTCCC

Coding sequence (CDS)

ATGTCTTCTCCATGTATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTAGAAATTATAAAATCTCCATCATCATCATCATCATGGATGATAGGTTCTCAAACATCATCCCCTTCCTCAACTCTATCTGAATCAAGCAACAATTCACAGATAGCAATTTCAACAAGAAAATCTCGAGCACCTAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTCTCTACAGCCTATCCCAATGTTTTCTCCACCAAACACCTCACAAATCCACGAAAATTCACCAAATCACAAGAATCATCCATGTTCTGTGATTCATCCGAATTGCTGTTGCCGTTTCGAGTAATCGACAGCTCTGGATTCCTCCTCCACCAGCCGCTCCTACAAGAAAAACCTAATTCCCAAATCCAATCAAAATTGGCCAATCTGTGGGAGAATCGGCCATGTTCGAGCCCAGGAGAGATCTATTTCCAACCGAATCCGATCCAGATGGAGGATTTCGACGCCGAATCGATCCTCGATGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTAAGCGTGGAAAGATTAGAAACAGCTAATTCAGCAAATTCAGCGCAGGATTCATGTGCTAACCCTAGAAATTGGAATTGTTACTGGAATCCAATCGGATTAGGTTTCAATCAGAAATTCGAATTCGAACGAGCAGCGATTCGACAAGTCGACAACGGAAACTGGTGGCGATTTCCGACTGTCGACGTTGTCGAGATCTCTCCTACACTAAATCCGAAGCCGCCGGCAGTGGTACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAAGTGGAGAAACTCACAGTGATTGAATCGAAGAAAGGCGCCGCCGCAAAAGCGCCGCCGCAGAAGGCGGCGATTCCGAAATCGAAACCGCCTGGATTGATTCTGAAACTGAACTATGAAGGCGTCGCCGCCGCTTGGTCCGACAGAGGATCTCCATTTTCCGACGAGATTCCGGGATCGGAAACGGCGGGAAGTGATGTTAATGCCAGGGTGGCCCAGATTGATTTATTTATGGACGGTGGAGGATTGTTGAGAGAAGCCAGTGTGTTACGCTACAAGGAGAAAAGGCGGAGCCGCTTGTTCTCGAAGAAGATCAGATACCAAGTCAGAAAAGTCAATGCAGATGGACGGCCCAGGATGAAGGGGCGATTTGTGAGGAGACCTAATTCAAGCGCCCGCGAATAG

Protein sequence

MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRAPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQMEDFDAESILDEEIEEGIDSIMGNLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEFERAAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGAAAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSARE

Homology

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BLAST of Sed0004951 vs. NCBI nr
Match: XP_038890141.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 630.9 bits (1626), Expect = 7.5e-177
Identity = 349/437 (79.86%), Postives = 370/437 (84.67%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESSNN+Q+AISTRKSR 
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQ-PLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPI---QMEDFDAESILDE 180
           GFLLHQ PL+ E+PNSQI SKL NLWENRPCSSPGEI FQPN +   ++EDFDAESILDE
Sbjct: 121 GFLLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVERLETANSANSAQDSCAN----PRNWNCYWNPIGLGFNQKFE--- 240
           EIEEGIDSIMGNLSV+ LET    NS QDSC N    PRNWNCYW+PIGLGFNQKFE   
Sbjct: 181 EIEEGIDSIMGNLSVDNLET---GNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGF 240

Query: 241 -----FERAAIRQVDNGNWWRFPTVDVVEISPTLNPKP--PAVVPAAVATKKKKKKKVEK 300
                 ER AIR VDNGNWWRFPTVDVVEISP LNPKP  PA  P+AVAT KKKKKKVEK
Sbjct: 241 GMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVAT-KKKKKKVEK 300

Query: 301 LTVIESKKGA-------AAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEI 360
           LTVIESKK A         K+   +  IPK KP GL+LKLNYE VA AWS RGSPFSDEI
Sbjct: 301 LTVIESKKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEI 360

Query: 361 PGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGR 413
           PGS+TAGSDVNAR+AQIDLF DGGGLLREASVLRYKEKRR+RLFSKKIRYQVRKVNADGR
Sbjct: 361 PGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGR 420

[Close]

BLAST of Sed0004951 vs. NCBI nr
Match: XP_022149812.1 (protein CHLOROPLAST IMPORT APPARATUS 2 [Momordica charantia])

HSP 1 Score: 614.0 bits (1582), Expect = 9.5e-172
Identity = 344/430 (80.00%), Postives = 369/430 (85.81%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESS N+Q+AISTRKSR 
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSESS-NTQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLST YPNVFSTKHLTNPRKFTK  + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQM-------EDFDAESI 180
           GFLLHQPLLQEKPNSQIQ+KLANLWE RPCSSPGEI FQPN +++       +DFDAESI
Sbjct: 121 GFLLHQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESI 180

Query: 181 LDEEIEEGIDSIMGNLSVERLETANSANSAQD-SCANPRNWNCYWN--PIGLGFNQKFEF 240
           LDEEIEEGIDSIMGNLSV+ LET   ANS QD SC NPRNWNCYWN  PIGLG NQKFEF
Sbjct: 181 LDEEIEEGIDSIMGNLSVDNLET---ANSPQDYSCTNPRNWNCYWNNPPIGLGLNQKFEF 240

Query: 241 --------ERAAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEK 300
                   ERAAIRQV++GNWWRFPTVDVVEISP LN KPPA  PAAV+T KKKKKK+EK
Sbjct: 241 GFGMQKATERAAIRQVEDGNWWRFPTVDVVEISPKLN-KPPA--PAAVST-KKKKKKMEK 300

Query: 301 LTVIESKKGAAAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAG 360
           LTVIE+KK A      QK   PKSK PGL+LKLNYE VA AWSDRGSPFSDEIPGS+TAG
Sbjct: 301 LTVIETKKAATIPQKDQKPT-PKSK-PGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTAG 360

Query: 361 SDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRF 413
           +DVN R+AQ+DLF+D GGLLREASVLRYKEKRR+RLFSKKIRYQVRKVNAD RPRMKGRF
Sbjct: 361 NDVNTRLAQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADERPRMKGRF 417

[Close]

BLAST of Sed0004951 vs. NCBI nr
Match: XP_022965486.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita maxima])

HSP 1 Score: 613.2 bits (1580), Expect = 1.6e-171
Identity = 332/421 (78.86%), Postives = 359/421 (85.27%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSP ISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSE       AISTRKSR 
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSE-------AISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVI+SS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSPD-SLFCESAELLLPFRVIESS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQMEDFDAESILDEEIEE 180
           GFLL+QPLL EKPNSQIQSKLANLWE+RPCSSPGEI FQPN ++MEDFDAESILDEE+EE
Sbjct: 121 GFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEE 180

Query: 181 GIDSIMGNLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEF--------ER 240
           GIDSIMGNLSV+ LET NSA     S  NP+NWNCYWNPIGLGFNQKFEF        ER
Sbjct: 181 GIDSIMGNLSVDNLETPNSAQDC--SSDNPKNWNCYWNPIGLGFNQKFEFGFGMRKAIER 240

Query: 241 AAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGA 300
           AAIR+VD+GNWWRFPTVDVV+ISP LNPKPPA  P   +TKKKKKKKVEKLTVIESKK A
Sbjct: 241 AAIRRVDDGNWWRFPTVDVVDISPKLNPKPPAPTPTVASTKKKKKKKVEKLTVIESKKTA 300

Query: 301 AAK-APPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQ 360
             K    +K  IPKSKPPGL+LKLNYE VA AWS RGSPF+D   GS++AG+DVNAR+AQ
Sbjct: 301 PPKEKSSEKPTIPKSKPPGLLLKLNYEAVADAWSARGSPFTDNHMGSKSAGNDVNARLAQ 360

Query: 361 IDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAR 413
           IDLF DGGGLLREASVLRYKEKRR+RL SKKIRYQV+KVN D RPR+KGRFVRRPNSSA 
Sbjct: 361 IDLFSDGGGLLREASVLRYKEKRRTRLLSKKIRYQVKKVNDDLRPRLKGRFVRRPNSSAT 409

[Close]

BLAST of Sed0004951 vs. NCBI nr
Match: XP_022937796.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata])

HSP 1 Score: 612.1 bits (1577), Expect = 3.6e-171
Identity = 336/421 (79.81%), Postives = 360/421 (85.51%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSP ISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSE       AISTRKSR 
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSE-------AISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQMEDFDAESILDEEIEE 180
           GFLL+QPLL EKPNSQIQSKLANLWE+RPCSSPGEI FQPN ++MEDFDAESILDEE+EE
Sbjct: 121 GFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEE 180

Query: 181 GIDSIMGNLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEF--------ER 240
           GIDSIMGNLSV+ LETANSA     S  NP+N NCYWNPIGLGFNQKFEF        ER
Sbjct: 181 GIDSIMGNLSVDNLETANSAQDC--STDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIER 240

Query: 241 AAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGA 300
           AAIR+VD+GNWWRFPTVDVV ISP LNPKPPA  P  VA+ KKKKKKVEKLTVIESKK A
Sbjct: 241 AAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTP-TVASTKKKKKKVEKLTVIESKKTA 300

Query: 301 AAK-APPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQ 360
             K    +K  IPKSKPPGL+LKLNYE VA AWS RGSPFSD  PGS++AG+DVNAR+AQ
Sbjct: 301 PPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQ 360

Query: 361 IDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAR 413
           IDLF DGGGLLREASVLRYKEKRR+RLFSKKIRYQV+KVN D RPR+KGRFVRRPNSSA 
Sbjct: 361 IDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSAT 408

[Close]

BLAST of Sed0004951 vs. NCBI nr
Match: XP_038890140.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 611.3 bits (1575), Expect = 6.1e-171
Identity = 338/425 (79.53%), Postives = 359/425 (84.47%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESSNN+Q+AISTRKSR 
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQ-PLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPI---QMEDFDAESILDE 180
           GFLLHQ PL+ E+PNSQI SKL NLWENRPCSSPGEI FQPN +   ++EDFDAESILDE
Sbjct: 121 GFLLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVERLETANSANSAQDSCAN----PRNWNCYWNPIGLGFNQKFE--- 240
           EIEEGIDSIMGNLSV+ LET    NS QDSC N    PRNWNCYW+PIGLGFNQKFE   
Sbjct: 181 EIEEGIDSIMGNLSVDNLET---GNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGF 240

Query: 241 -----FERAAIRQVDNGNWWRFPTVDVVEISPTLNPKP--PAVVPAAVATKKKKKKKVEK 300
                 ER AIR VDNGNWWRFPTVDVVEISP LNPKP  PA  P+AVAT KKKKKKVEK
Sbjct: 241 GMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVAT-KKKKKKVEK 300

Query: 301 LTVIESKKGA-------AAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEI 360
           LTVIESKK A         K+   +  IPK KP GL+LKLNYE VA AWS RGSPFSDEI
Sbjct: 301 LTVIESKKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEI 360

Query: 361 PGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGR 401
           PGS+TAGSDVNAR+AQIDLF DGGGLLREASVLRYKEKRR+RLFSKKIRYQVRKVNADGR
Sbjct: 361 PGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGR 418

[Close]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 5.7e-71
Identity = 202/458 (44.10%), Postives = 265/458 (57.86%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSR 62
           S C+S   GG  AY+F+LE +KSP  SSS    ++ +SPSST+SESS NS +AISTRK R
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSS-TTTTRATSPSSTISESS-NSPLAISTRKPR 61

Query: 63  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMF-------CDSSELLL 122
             RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S  S  +        D+S+LLL
Sbjct: 62  TQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDF 182
           P+  I+   FL H           IQ+K     + +  +S G+ Y     I+     ++F
Sbjct: 122 PYESIEEPDFLFH---------PTIQTKTEFFSDQKEVNSGGDCY--GGEIEKFDFSDEF 181

Query: 183 DAESILDEEIEEGIDSIMG-------NLSVERLETANSANSAQDSCANP----------R 242
           DAESILDE+IEEGIDSIMG       N  +         N    S +N            
Sbjct: 182 DAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMIN 241

Query: 243 NWNCYWN----PIGLGFNQKFEFERAAIRQVDNGNWWRFPTVDVVEISPTL--------- 302
           +WN   N    P+GLG        R+A+R+ D+   W+  TVD  +ISP +         
Sbjct: 242 SWNRSSNGFNFPLGLGL-------RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 301

Query: 303 -------NPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGAAAKAPPQKAAIPKSKPPGL 362
                  +     V+    + KKKKKKK+   T + ++  + +    ++ ++ ++ P   
Sbjct: 302 STVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITE--SKSLEDTEETSLKRTGP--- 361

Query: 363 ILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYK 410
           +LKL+Y+GV  AWSD+ SPF DEI GSE    DVNAR+AQIDLF D G  +REASVLRYK
Sbjct: 362 LLKLDYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYK 421

[Close]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 9.9e-15
Identity = 52/119 (43.70%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 311 LILKLNYEGVAAAWSDRGSPFSDEIP-------------------GSETAGSDVNARVAQ 370
           L+L+LNY+ V + W  +G P+S   P                   G  T           
Sbjct: 293 LMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLP 352

Query: 371 IDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSA 411
              F DGG   REA V RY+EKRR+RLFSKKIRY+VRK+NA+ RPRMKGRFV+R + +A
Sbjct: 353 SSGFGDGG---REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAA 408

[Close]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-14
Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 305 KSKPPGLILKLNYEGVAAAWSDRGSPFSDEIP---------------GSETAGSDVNARV 364
           + K   L+L+L+YE V + W  +G P++  +P               G   A +  +   
Sbjct: 283 EKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHF 342

Query: 365 AQIDLFM-DGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRR 406
             + L + D G   REA V RY+EKRR+RLFSKKIRY+VRK+NA+ RPRMKGRFV+R
Sbjct: 343 RGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399

[Close]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-13
Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 273 KKKKKKKVEKLTVIESK-KGAAAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPF 332
           K  K+ K E     E+K +   +K   ++A+  K +   L L+L+Y  V +AW + GSP+
Sbjct: 238 KDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPW 297

Query: 333 SDEIP-----GSETAGSDVNARVAQI---------DLFMDGGGL--LREASVLRYKEKRR 392
              I      G  T    V     ++             DGGG    REA VLRYKEKRR
Sbjct: 298 KTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRR 357

Query: 393 SRLFSKKIRYQVRKVNADGRPRMKGRFVRR 406
           +RLFSKKIRY+VRK+NA+ RPR+KGRFV+R
Sbjct: 358 TRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 7.1e-13
Identity = 48/97 (49.48%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 314 KLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQIDLFMDG-----GGLLREASVL 373
           +LNYE V AAW  + SP             DV    +   L   G         REA V 
Sbjct: 229 RLNYENVIAAWDKQESP------------RDVKNNTSSFQLVPPGIEEKRVRSEREARVW 288

Query: 374 RYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRR 406
           RY++KR++RLF KKIRY+VRKVNAD RPRMKGRFVRR
Sbjct: 289 RYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313

[Close]

BLAST of Sed0004951 vs. ExPASy TrEMBL
Match: A0A6J1D908 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC111018157 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.6e-172
Identity = 344/430 (80.00%), Postives = 369/430 (85.81%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESS N+Q+AISTRKSR 
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSESS-NTQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLST YPNVFSTKHLTNPRKFTK  + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQM-------EDFDAESI 180
           GFLLHQPLLQEKPNSQIQ+KLANLWE RPCSSPGEI FQPN +++       +DFDAESI
Sbjct: 121 GFLLHQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESI 180

Query: 181 LDEEIEEGIDSIMGNLSVERLETANSANSAQD-SCANPRNWNCYWN--PIGLGFNQKFEF 240
           LDEEIEEGIDSIMGNLSV+ LET   ANS QD SC NPRNWNCYWN  PIGLG NQKFEF
Sbjct: 181 LDEEIEEGIDSIMGNLSVDNLET---ANSPQDYSCTNPRNWNCYWNNPPIGLGLNQKFEF 240

Query: 241 --------ERAAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEK 300
                   ERAAIRQV++GNWWRFPTVDVVEISP LN KPPA  PAAV+T KKKKKK+EK
Sbjct: 241 GFGMQKATERAAIRQVEDGNWWRFPTVDVVEISPKLN-KPPA--PAAVST-KKKKKKMEK 300

Query: 301 LTVIESKKGAAAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAG 360
           LTVIE+KK A      QK   PKSK PGL+LKLNYE VA AWSDRGSPFSDEIPGS+TAG
Sbjct: 301 LTVIETKKAATIPQKDQKPT-PKSK-PGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTAG 360

Query: 361 SDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRF 413
           +DVN R+AQ+DLF+D GGLLREASVLRYKEKRR+RLFSKKIRYQVRKVNAD RPRMKGRF
Sbjct: 361 NDVNTRLAQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADERPRMKGRF 417

[Close]

BLAST of Sed0004951 vs. ExPASy TrEMBL
Match: A0A6J1HLT7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465375 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 7.8e-172
Identity = 332/421 (78.86%), Postives = 359/421 (85.27%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSP ISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSE       AISTRKSR 
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSE-------AISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVI+SS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSPD-SLFCESAELLLPFRVIESS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQMEDFDAESILDEEIEE 180
           GFLL+QPLL EKPNSQIQSKLANLWE+RPCSSPGEI FQPN ++MEDFDAESILDEE+EE
Sbjct: 121 GFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEE 180

Query: 181 GIDSIMGNLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEF--------ER 240
           GIDSIMGNLSV+ LET NSA     S  NP+NWNCYWNPIGLGFNQKFEF        ER
Sbjct: 181 GIDSIMGNLSVDNLETPNSAQDC--SSDNPKNWNCYWNPIGLGFNQKFEFGFGMRKAIER 240

Query: 241 AAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGA 300
           AAIR+VD+GNWWRFPTVDVV+ISP LNPKPPA  P   +TKKKKKKKVEKLTVIESKK A
Sbjct: 241 AAIRRVDDGNWWRFPTVDVVDISPKLNPKPPAPTPTVASTKKKKKKKVEKLTVIESKKTA 300

Query: 301 AAK-APPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQ 360
             K    +K  IPKSKPPGL+LKLNYE VA AWS RGSPF+D   GS++AG+DVNAR+AQ
Sbjct: 301 PPKEKSSEKPTIPKSKPPGLLLKLNYEAVADAWSARGSPFTDNHMGSKSAGNDVNARLAQ 360

Query: 361 IDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAR 413
           IDLF DGGGLLREASVLRYKEKRR+RL SKKIRYQV+KVN D RPR+KGRFVRRPNSSA 
Sbjct: 361 IDLFSDGGGLLREASVLRYKEKRRTRLLSKKIRYQVKKVNDDLRPRLKGRFVRRPNSSAT 409

[Close]

BLAST of Sed0004951 vs. ExPASy TrEMBL
Match: A0A6J1FBD7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444083 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 1.7e-171
Identity = 336/421 (79.81%), Postives = 360/421 (85.51%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRA 60
           MSSP ISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSE       AISTRKSR 
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSE-------AISTRKSRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSS 120
           PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS + S+FC+S+ELLLPFRVIDSS
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD-SLFCESAELLLPFRVIDSS 120

Query: 121 GFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQMEDFDAESILDEEIEE 180
           GFLL+QPLL EKPNSQIQSKLANLWE+RPCSSPGEI FQPN ++MEDFDAESILDEE+EE
Sbjct: 121 GFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEE 180

Query: 181 GIDSIMGNLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEF--------ER 240
           GIDSIMGNLSV+ LETANSA     S  NP+N NCYWNPIGLGFNQKFEF        ER
Sbjct: 181 GIDSIMGNLSVDNLETANSAQDC--STDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIER 240

Query: 241 AAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGA 300
           AAIR+VD+GNWWRFPTVDVV ISP LNPKPPA  P  VA+ KKKKKKVEKLTVIESKK A
Sbjct: 241 AAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTP-TVASTKKKKKKVEKLTVIESKKTA 300

Query: 301 AAK-APPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQ 360
             K    +K  IPKSKPPGL+LKLNYE VA AWS RGSPFSD  PGS++AG+DVNAR+AQ
Sbjct: 301 PPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQ 360

Query: 361 IDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAR 413
           IDLF DGGGLLREASVLRYKEKRR+RLFSKKIRYQV+KVN D RPR+KGRFVRRPNSSA 
Sbjct: 361 IDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSAT 408

[Close]

BLAST of Sed0004951 vs. ExPASy TrEMBL
Match: A0A0A0LGV4 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.9e-171
Identity = 343/436 (78.67%), Postives = 363/436 (83.26%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNN-SQIAISTRKSR 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESSNN +Q+AISTRK R
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSP--SSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLR 60

Query: 61  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQE--SSMFCDSSELLLPFRVI 120
            PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS +  SS+FC+S+ELLLPFRVI
Sbjct: 61  TPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVI 120

Query: 121 DSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPI---QMEDFDAESIL 180
           DSSGFLLHQPLL+EKPNSQI SKL NLWENRPCSSPGEI FQPN +   ++EDFDAESIL
Sbjct: 121 DSSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESIL 180

Query: 181 DEEIEEGIDSIMGNLSVERLETANSANSAQDSCAN----PRNWNCYWNPIGLGFNQKFE- 240
           DEEIEEGIDSIMGNLSV+ LE     NS QDSC N    PRNWN  WNPIGLGFNQKFE 
Sbjct: 181 DEEIEEGIDSIMGNLSVDNLE---KGNSTQDSCVNANNHPRNWN--WNPIGLGFNQKFES 240

Query: 241 -------FERAAIRQVDNGNWWRFPTVDVVEISPTLNPKPPA--------VVPAAVATKK 300
                   ER AIR VDNGNWWRFPTVDV+EISP LNPKPPA          PAAV+T K
Sbjct: 241 GFGFRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPTPTPTPTPAAVST-K 300

Query: 301 KKKKKVEKLTVIESKKGA-AAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPFSD 360
           KKKKKVEKLTVIESKK A   +    +  IPK KP GL+LKLNYE VA AWS RGSPFSD
Sbjct: 301 KKKKKVEKLTVIESKKAAIPLQKEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSD 360

Query: 361 EIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNAD 410
           EIP S+TAGSDVNARVA IDLF +GGGLLREASVLRYKEKRR+RLFSKKIRYQVRKVNAD
Sbjct: 361 EIPSSDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNAD 420

[Close]

BLAST of Sed0004951 vs. ExPASy TrEMBL
Match: A0A1S3BQX8 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.1e-170
Identity = 340/438 (77.63%), Postives = 362/438 (82.65%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNN-SQIAISTRKSR 60
           MSSPCISGGGRAYNFDLEI+KSP  SSSW   SQTSSPSSTLSESSNN +Q+AISTRK R
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSP--SSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLR 60

Query: 61  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQE--SSMFCDSSELLLPFRVI 120
            PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKS +  SS+FC+S+ELLLPFRVI
Sbjct: 61  TPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVI 120

Query: 121 DSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPI---QMEDFDAESIL 180
           DSSGFLLHQPLL+EKPNSQI SKL NLWENRPCSSPGEI FQPN +   ++EDFDAESIL
Sbjct: 121 DSSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESIL 180

Query: 181 DEEIEEGIDSIMGNLSVERLETANSANSAQDSCAN----PRNWNCYWNPIGLGFNQKFE- 240
           DEEIEEGIDSIMGNLSV+ LE   + NS QDSC N     RNWN  WNPIGLGFNQKFE 
Sbjct: 181 DEEIEEGIDSIMGNLSVDNLE---NGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFES 240

Query: 241 -------FERAAIRQVDNGNWWRFPTVDVVEISPTLNPKPPAVVPA-------AVATKKK 300
                   ER AIR VDNGNWWRFPTVDV+EISP LNPKPPA  PA       A  + KK
Sbjct: 241 GFGFRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKK 300

Query: 301 KKKKVEKLTVIESKKGA----AAKAPPQKAAIPKSKPPGLILKLNYEGVAAAWSDRGSPF 360
           KKKKVEKLTVIESKK A      K+   +  IPK KP GL+LKLNYE VA AWS RGSPF
Sbjct: 301 KKKKVEKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPF 360

Query: 361 SDEIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVN 410
           SDEIP S+TAGSDVNAR+A IDLF +GGGLLREASVLRYKEKRR+RLFSKKIRYQVRKVN
Sbjct: 361 SDEIPSSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVN 420

[Close]

BLAST of Sed0004951 vs. TAIR 10
Match: AT5G57180.2 (chloroplast import apparatus 2 )

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-72
Identity = 202/458 (44.10%), Postives = 265/458 (57.86%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSR 62
           S C+S   GG  AY+F+LE +KSP  SSS    ++ +SPSST+SESS NS +AISTRK R
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSS-TTTTRATSPSSTISESS-NSPLAISTRKPR 61

Query: 63  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMF-------CDSSELLL 122
             RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S  S  +        D+S+LLL
Sbjct: 62  TQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDF 182
           P+  I+   FL H           IQ+K     + +  +S G+ Y     I+     ++F
Sbjct: 122 PYESIEEPDFLFH---------PTIQTKTEFFSDQKEVNSGGDCY--GGEIEKFDFSDEF 181

Query: 183 DAESILDEEIEEGIDSIMG-------NLSVERLETANSANSAQDSCANP----------R 242
           DAESILDE+IEEGIDSIMG       N  +         N    S +N            
Sbjct: 182 DAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMIN 241

Query: 243 NWNCYWN----PIGLGFNQKFEFERAAIRQVDNGNWWRFPTVDVVEISPTL--------- 302
           +WN   N    P+GLG        R+A+R+ D+   W+  TVD  +ISP +         
Sbjct: 242 SWNRSSNGFNFPLGLGL-------RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 301

Query: 303 -------NPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGAAAKAPPQKAAIPKSKPPGL 362
                  +     V+    + KKKKKKK+   T + ++  + +    ++ ++ ++ P   
Sbjct: 302 STVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITE--SKSLEDTEETSLKRTGP--- 361

Query: 363 ILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYK 410
           +LKL+Y+GV  AWSD+ SPF DEI GSE    DVNAR+AQIDLF D G  +REASVLRYK
Sbjct: 362 LLKLDYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYK 421

[Close]

BLAST of Sed0004951 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 262.3 bits (669), Expect = 6.5e-70
Identity = 184/422 (43.60%), Postives = 244/422 (57.82%), Query Frame = 0


Query: 12  AYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRAPRKRPNQTYNE 71
           AY+F+LE++KSP S++       T SPSST+SE +N+   +ISTR+ R PRKRPNQTY+E
Sbjct: 5   AYSFELEMMKSPPSNN-------TPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDE 64

Query: 72  ATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSSGFLLHQPLLQE 131
           A  LLSTAYP +FS+K        T     S + ++S+LLLP+  I+ + FL        
Sbjct: 65  AAALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF------- 124

Query: 132 KPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDFDAESILDEEIEEGIDSIMG 191
             N  I +K  +  E +      E+ F    +     ++DFDAESILDEEIEEGIDS MG
Sbjct: 125 --NPTIPTKTEHFLEQK------EVSFDDLEVNGFGVLDDFDAESILDEEIEEGIDSFMG 184

Query: 192 NLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEFERAAIRQVDNGNWWRFP 251
           N+     +  N     +        WN  +  +GLG        R+++RQ ++ NWW+FP
Sbjct: 185 NIESNDGDRENCYRVGRLEEIMKNAWNGRFR-LGLGL-------RSSLRQNNDENWWKFP 244

Query: 252 TVDVVEISPTLNPKPPA----------------VVPAAVATKKKKKKKVEKLTVIESKKG 311
           TV+  +ISP +     A                 +  A   KKKKKKK       + KK 
Sbjct: 245 TVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKK-------KKKKV 304

Query: 312 AAAKAPPQKAAIPKSKPP-----GLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVN 371
           A A A  + + +  S P        +LKL+Y+GV  AWS + SPFSDEI GS+  G D +
Sbjct: 305 APAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFH 364

Query: 372 ARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMKGRFVRRP 409
            R+ +IDLF + G  +REASVLRYKEKRR+RLFSKKIRYQVRK+NAD RPRMKGRFVRRP
Sbjct: 365 VRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRP 386

[Close]

BLAST of Sed0004951 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 252.3 bits (643), Expect = 6.7e-67
Identity = 184/437 (42.11%), Postives = 244/437 (55.84%), Query Frame = 0


Query: 12  AYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSRAPRKRPNQTYNE 71
           AY+F+LE++KSP S++       T SPSST+SE +N+   +ISTR+ R PRKRPNQTY+E
Sbjct: 5   AYSFELEMMKSPPSNN-------TPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDE 64

Query: 72  ATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMFCDSSELLLPFRVIDSSGFLLHQPLLQE 131
           A  LLSTAYP +FS+K        T     S + ++S+LLLP+  I+ + FL        
Sbjct: 65  AAALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF------- 124

Query: 132 KPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDFDAESILDEEIEEGIDSIMG 191
             N  I +K  +  E +      E+ F    +     ++DFDAESILDEEIEEGIDS MG
Sbjct: 125 --NPTIPTKTEHFLEQK------EVSFDDLEVNGFGVLDDFDAESILDEEIEEGIDSFMG 184

Query: 192 NLSVERLETANSANSAQDSCANPRNWNCYWNPIGLGFNQKFEFERAAIRQVDNGNWWRFP 251
           N+     +  N     +        WN  +  +GLG        R+++RQ ++ NWW+FP
Sbjct: 185 NIESNDGDRENCYRVGRLEEIMKNAWNGRFR-LGLGL-------RSSLRQNNDENWWKFP 244

Query: 252 TVDVVEISPTLNPKPPA----------------VVPAAVATKKKKKKKVEKLTVIESKKG 311
           TV+  +ISP +     A                 +  A   KKKKKKK       + KK 
Sbjct: 245 TVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKK-------KKKKV 304

Query: 312 AAAKAPPQKAAIPKSKPP-----GLILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVN 371
           A A A  + + +  S P        +LKL+Y+GV  AWS + SPFSDEI GS+  G D +
Sbjct: 305 APAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFH 364

Query: 372 ARVAQIDLFMDGGGLLREASVLRYKEKRRSRLFSKKIRYQVRKVNADGRPRMK------- 409
            R+ +IDLF + G  +REASVLRYKEKRR+RLFSKKIRYQVRK+NAD RPRMK       
Sbjct: 365 VRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKVKDWHCN 401

[Close]

BLAST of Sed0004951 vs. TAIR 10
Match: AT5G57180.1 (chloroplast import apparatus 2 )

HSP 1 Score: 251.9 bits (642), Expect = 8.8e-67
Identity = 193/448 (43.08%), Postives = 256/448 (57.14%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSR 62
           S C+S   GG  AY+F+LE +KSP  SSS    ++ +SPSST+SESS NS +AISTRK R
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSS-TTTTRATSPSSTISESS-NSPLAISTRKPR 61

Query: 63  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMF-------CDSSELLL 122
             RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S  S  +        D+S+LLL
Sbjct: 62  TQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDF 182
           P+  I+   FL H           IQ+K     + +  +S G+ Y     I+     ++F
Sbjct: 122 PYESIEEPDFLFH---------PTIQTKTEFFSDQKEVNSGGDCY--GGEIEKFDFSDEF 181

Query: 183 DAESILDEEIEEGIDSIMG-------NLSVERLETANSANSAQDSCANP----------R 242
           DAESILDE+IEEGIDSIMG       N  +         N    S +N            
Sbjct: 182 DAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMIN 241

Query: 243 NWNCYWN----PIGLGFNQKFEFERAAIRQVDNGNWWRFPTVDVVEISPTL--------- 302
           +WN   N    P+GLG        R+A+R+ D+   W+  TVD  +ISP +         
Sbjct: 242 SWNRSSNGFNFPLGLGL-------RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 301

Query: 303 -------NPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGAAAKAPPQKAAIPKSKPPGL 362
                  +     V+    + KKKKKKK+   T + ++  + +    ++ ++ ++ P   
Sbjct: 302 STVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITE--SKSLEDTEETSLKRTGP--- 361

Query: 363 ILKLNYEGVAAAWSDRGSPFSDEIPGSETAGSDVNARVAQIDLFMDGGGLLREASVLRYK 400
           +LKL+Y+GV  AWSD+ SPF DEI GSE    DVNAR+AQIDLF D G  +REASVLRYK
Sbjct: 362 LLKLDYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYK 419

[Close]

BLAST of Sed0004951 vs. TAIR 10
Match: AT5G57180.3 (chloroplast import apparatus 2 )

HSP 1 Score: 175.6 bits (444), Expect = 8.0e-44
Identity = 149/395 (37.72%), Postives = 208/395 (52.66%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIIKSPSSSSSWMIGSQTSSPSSTLSESSNNSQIAISTRKSR 62
           S C+S   GG  AY+F+LE +KSP  SSS    ++ +SPSST+SESS NS +AISTRK R
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSS-TTTTRATSPSSTISESS-NSPLAISTRKPR 61

Query: 63  APRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSQESSMF-------CDSSELLL 122
             RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S  S  +        D+S+LLL
Sbjct: 62  TQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQIQSKLANLWENRPCSSPGEIYFQPNPIQ----MEDF 182
           P+  I+   FL H           IQ+K     + +  +S G+ Y     I+     ++F
Sbjct: 122 PYESIEEPDFLFH---------PTIQTKTEFFSDQKEVNSGGDCY--GGEIEKFDFSDEF 181

Query: 183 DAESILDEEIEEGIDSIMG-------NLSVERLETANSANSAQDSCANP----------R 242
           DAESILDE+IEEGIDSIMG       N  +         N    S +N            
Sbjct: 182 DAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMIN 241

Query: 243 NWNCYWN----PIGLGFNQKFEFERAAIRQVDNGNWWRFPTVDVVEISPTL--------- 302
           +WN   N    P+GLG        R+A+R+ D+   W+  TVD  +ISP +         
Sbjct: 242 SWNRSSNGFNFPLGLGL-------RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 301

Query: 303 -------NPKPPAVVPAAVATKKKKKKKVEKLTVIESKKGAAAKAPPQKAAIPKSKPPGL 347
                  +     V+    + KKKKKKK+   T + ++  + +    ++ ++ ++ P   
Sbjct: 302 STVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITE--SKSLEDTEETSLKRTGP--- 361

The following BLAST results are available for this feature:

BLAST of Sed0004951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890141.1	7.5e-177	79.86	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida]	[more]
XP_022149812.1	9.5e-172	80.00	protein CHLOROPLAST IMPORT APPARATUS 2 [Momordica charantia]	[more]
XP_022965486.1	1.6e-171	78.86	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita maxima]	[more]
XP_022937796.1	3.6e-171	79.81	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata]	[more]
XP_038890140.1	6.1e-171	79.53	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0004951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU68	5.7e-71	44.10	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q8RWD0	9.9e-15	43.70	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q8LG76	1.7e-14	42.74	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	2.5e-13	41.33	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	7.1e-13	49.48	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of Sed0004951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D908	4.6e-172	80.00	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HLT7	7.8e-172	78.86	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FBD7	1.7e-171	79.81	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0LGV4	3.9e-171	78.67	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV...	[more]
A0A1S3BQX8	1.1e-170	77.63	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Sed0004951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57180.2	4.1e-72	44.10	chloroplast import apparatus 2	[more]
AT4G25990.1	6.5e-70	43.60	CCT motif family protein	[more]
AT4G25990.2	6.7e-67	42.11	CCT motif family protein	[more]
AT5G57180.1	8.8e-67	43.08	chloroplast import apparatus 2	[more]
AT5G57180.3	8.0e-44	37.72	chloroplast import apparatus 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 363..405 e-value: 1.9E-17 score: 63.1
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 363..405 score: 15.755179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..66
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..409
None	No IPR available	PANTHER	PTHR31874:SF10	OS02G0148000 PROTEIN	coord: 1..409

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004951.1	Sed0004951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding