Sed0004945 (gene) Chayote v1

Overview


Name	Sed0004945
Type	gene
Organism	Sechium edule (Chayote v1)
Description	50S ribosomal protein L25
Location	LG02: 46016247 .. 46020658 (-)
RNA-Seq Expression	Sed0004945
Synteny	Sed0004945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACCACAGGTTCAGTCAGTAAATCCAGCCGCCTCACCTTCAACTCTCGCCCTCATTTCACTCCACCGGCGACGGCACCGGCAGCCGGCGGTCAATCAACCTCTCCGGCAGCTCCAACGGACTCACCTTCTACGAATTAACCCTATATCGGTCAAAAGCCCCTTCAGATTTCTCCGCTAAAATCCTCCCTTAACCCTTTCCGATCATCACTCTCCGCCCGATGCTACGCCTCTACCACTCCCCTACTCTCTCCAGAGTCTTCCTCCTCCGGCGGTTTTCCTCCGCCGCCACCGCCGCCGCCCAGGTTCTCGATTCCGATCCCGAACCTTCGTTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCCAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGCAAAAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGCACTCCGAGCATCGTTTTCGAGCAAGAGGACGGCCAACATGGCGGAAATAAGCGTCTCATCTCTGTGCGGACGAATCAGATTCGGAAGCTTGTAAATCATCTCGGCCGTTCCTTCTTCCTTTCTAGGGTTTTCGATCTTGAAGTTCTGTCCGAGTTTGAGTCTGGGGATGTTGTTGAGAAGGTTCGGGTTTTACCGCGGCAGGTACTCCATTCTCTTATCTTGTTCGTAAGAAGTATTGGTTCTTTTTTCAATTTCGCTTAGGAATTTATATGAAAATTTATCTATATTGAGTTTGGGAGATGATTTGTGAGGATTAATAATGCTGATCCTTTCATGGTGGAAGGAAGGACTAAACTGAGGGGAGAAAGATAATATCTTACATTGGACACCAAATGTAGTCACCCTCAGAAATTTCATGCTTAAACGAGGCGTCCATCTCGTTTTTACTTTTGCGGGCTCTAGATGAGCTGAAAGCATTATGCCCCTGATTTTAAAACTGTAATTTCATGATTTTTTTTTAACAAGAAACAAACTATTTCATTGATATAAAGGAGAATGGGTTGAAGAGAATAAGGTAGAAGAGGAGCAAACTACAAGGCAAACATCAAAGGGAAAAAACAATGGAAAGACAAAGAGCTATGTGTGCGTGCAGTCTTGCTTGTTGATGTTGCCATTGGATATGAAGTGAGGACAAGGAACCCATACGATGTCCTTGGTTTTTTACCTTTCCATGTGGTGCTTATGAAGTAGGTGCTAGTAATCATAAAGGGATAACCATCATGGAATGGCCCAAGTGGTCAAAGAGGTCTTTAGGATGCTTAAGGTGATGGGTTCAATCCGTGATAGCCTACCTAGAAATTAATTTCCTGCGAGTTTCCTTGACATCCAAATATTATAGGATGAGGCAGTATGTCCCGTGACACTAGTTGAGGTGCGCGCAAGATGGCTCGGATAGTCACAGAAATAAAAAAAGTAATCATAAAGGGATCCTTGCTTACATGAATACTTCGATGTAGGTGAGAGATTGACAATGATGTTGAGTAGTTCATCATAATTTTTTTGTCAATGGTTCTCTAAGGCCTGAAGTCACACTACAGTGAGATAATGATGGAAAAAAAAGTAGAATCACTCTTATCTTTGATTTTGAGCAATCGCTGAGAAGGGGCCCCAAGATAGAGTTGACACATGGAGTTGTTCTCAATAGTCTAGAAAGATGTCTAAAAACAAGATTATATAGTTGGAGATCAATGCTTGAGAAGAGAAGCCCTATGTGCAATAGTGAGATCCATTTAGTCTCAACATCGGTAGGTGTTGCATGGAGAGGAGGACCAACACACCTACCAATGAGTGATAGGCGATCAGTGGCGCATTTATGTGAAGAAAGATCGAATATATACACCTTTGGCAGGTGTTGTAATGGGGAGGAGAGGTGACACAACACTCCAATCGGTATATGTTTACCAGATCTCGAAAGGGTAGGAGGAAGAGAGATAAATGAGATAAGAGAGAGGTGATCAATCAGATGAGACAAAACAAAATCGTTAAAAAATGAAGAGCCATACGAGCATAGGGAGGAGAGATCTAGCGATTTGGTGTTATAAACATTGTTGGTTCACCTTCATTCAAGTTTGAAAAGATTAGATAAAGTATAGGGAGTGTCTCTGATGAATGGAAATGATACCGACTCCACAACAAAAGGATAAAATGTCTGCAAGATACCCAAGATCGAAGGTTGCTAGAAAATGAGAGTTTGGCAACACTCAATCCTGGGTGAGTTTCAAGTGGGCTTCTACGTGAGTAGATCAAGCCCAAATAAAAAAAAATGATAGAAAGAAAGCTAATAGGGAGATTCTAGCTGAAAAATTGTATATGTACAAATTTGAAGCAACCCATAAGTAGGTCACCAAGGGGAGTTTTTTTTTATCGAGACCAGATGTCGGGGTCACGGTTCGTCATTGGAAAATGTTGTGCACAGTGACGAATAGAGCTACATGTGGGTCATGAGAGTTCTCGCCGAAGATAACTTCAGATTACTCATGAAACTAGATTTGTTGCCAAAAAAGCATGTACGAGAAAACCCATACGCCTAATTGTGTTTAGTCGTTAGAAAAGGTTGTGGAGGTTGTACAGCAGGTGGCTCGTTGAAGAACTTTTGAGAGGAGAAGTTCAGTGGAGATGAATAGTTGCTAATGGAGAGGAGATGATCGAAAAAAATCATCAAAAATCACCAAAGAATATTACTAGATGTTCCTTATCTGGTGCTGGTGAGACCAGTGCTTTAAAAGGCGTGCCCAAGCGTGCCTAGGCCCCTAAGGCGCAAGTGCCTTGCCTGGGAAAGGCGAGGTGTGCTTAATAAGGCGCGCTCCTATTGGCACCCTACGTGAAGTCTCGGGTGCCAAAAGGCGCGCAACTTGTGGGCTTTTGTTTTTTCTTAGGGCTTTTTACTATTTTTGCCTAATTTTTTGTGTTTTAGAGTCTCTTTAAGCGTGAGATAACTTATTCAAGATATTTCAATACCGTAAATTTCTTAATTCTTCAACTCACACACACACACATGAGAATATACATTTTCATTTTGATTATAAGTCAGGTAAGATCTTGTGAGAATATACATTTTTATATATTTGAGTTAGAGAAGAACGATTTTGAACTTATACCATTCATGTCTGTTCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTAATGTACCTCTTGTATTCCGAGGTGAAGATGTTTGTCCTGGATTGAGGAAAGGTACTACTACTACACGACTAATCTCCTTATTTTTTTTATATTTTTTTTTGTTAAGAGTATACAAATGTTATGCAGTAATAGTATGAAGTATGATCAATGAAGATTAATTTTGAAGTGTTTTAGATATGATTGTTTATGGGCGGGTAGGAAAGCTATCATTGATATGGCCTTTGGGATGCTTGAATTCACAGAACATCACCAAAAGCTTATGGTATTATATTGAAACATCAGGTTTATATTCTGCTAGATTGAGTTGAAATGATCCAGTTTCTGTTTCTGCAACCTAATCACATCTGGTTTCTATTTTGTGGGGCTATTTTTGTATGCACTTGTATCTTCTTTCATTTTTCTCCGAGTTCAGTTTCTCATGAACTACGAAAATGCTTCGTAAAATTGGTTAAAAAAATGCTAGCTCTTCATTTTTACTCTCTGAAAAGCATCTGGTTTACTTAAAAATGACCTGCATTCCTATAAAAAATCCGATATGCAATCTTCAAAAGACAGCAACTACAGTTTTACGCCTTCGATGACCATTTTTTTTAATGTTTGAAAAATTCTACAGGATCTTATTTGAATACAATTAAGAGGACTATTAAATACCTTTGCCCTGCCGATATCGTTCCTCCGTATATCGACGTCGATCTGAGCGAGTTAGATGTTGGCCAAAAGCTGGTTATGGGCGACCTCAAGGTTCATCCTGCATTAAAGCTCCTTCAGTCAAAGGACGAGCCTATTTGTAAGATTGCAGGAGCCAGAGCTGAGCAGCCTAAGAAATCAAAATAATTCTGGACTATCAATCTCTTAGTTGCTTCGGCGTTAAAGCTTCTTCTGTTCGAGCCCGTTTGTTAGATTTTGGTAGCCAGGATTTTCTGATCAGCCAAAGAAATCTTAATAAAACCCTGCAGATTTTGATAGCCAGTAATGTTTACATTTTTCTCCCTATATTTTGGAAAGCAAGTTGTTTACCGATGGTTCATTAGCATTCAGTTTATCAATCTCTGTTCATGGAATGCTTGAACTTTGCTAAGTAACACAATATTCTCATTTTTTAGGGGGTTTTTAGCTCAATTGAAAGATGCACATGTAACATATTATACACTTTCCCCTTGGCATGCTTTACCTCAGACAAATGGAAAATTGCAACAAGTTTTGGTTTTTA

mRNA sequence

CCCACCACAGGTTCAGTCAGTAAATCCAGCCGCCTCACCTTCAACTCTCGCCCTCATTTCACTCCACCGGCGACGGCACCGGCAGCCGGCGGTCAATCAACCTCTCCGGCAGCTCCAACGGACTCACCTTCTACGAATTAACCCTATATCGGTCAAAAGCCCCTTCAGATTTCTCCGCTAAAATCCTCCCTTAACCCTTTCCGATCATCACTCTCCGCCCGATGCTACGCCTCTACCACTCCCCTACTCTCTCCAGAGTCTTCCTCCTCCGGCGGTTTTCCTCCGCCGCCACCGCCGCCGCCCAGGTTCTCGATTCCGATCCCGAACCTTCGTTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCCAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGCAAAAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGCACTCCGAGCATCGTTTTCGAGCAAGAGGACGGCCAACATGGCGGAAATAAGCGTCTCATCTCTGTGCGGACGAATCAGATTCGGAAGCTTGTAAATCATCTCGGCCGTTCCTTCTTCCTTTCTAGGGTTTTCGATCTTGAAGTTCTGTCCGAGTTTGAGTCTGGGGATGTTGTTGAGAAGGTTCGGGTTTTACCGCGGCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTAATGTACCTCTTGTATTCCGAGGTGAAGATGTTTGTCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACTATTAAATACCTTTGCCCTGCCGATATCGTTCCTCCGTATATCGACGTCGATCTGAGCGAGTTAGATGTTGGCCAAAAGCTGGTTATGGGCGACCTCAAGGTTCATCCTGCATTAAAGCTCCTTCAGTCAAAGGACGAGCCTATTTGTAAGATTGCAGGAGCCAGAGCTGAGCAGCCTAAGAAATCAAAATAATTCTGGACTATCAATCTCTTAGTTGCTTCGGCGTTAAAGCTTCTTCTGTTCGAGCCCGTTTGTTAGATTTTGGTAGCCAGGATTTTCTGATCAGCCAAAGAAATCTTAATAAAACCCTGCAGATTTTGATAGCCAGTAATGTTTACATTTTTCTCCCTATATTTTGGAAAGCAAGTTGTTTACCGATGGTTCATTAGCATTCAGTTTATCAATCTCTGTTCATGGAATGCTTGAACTTTGCTAAGTAACACAATATTCTCATTTTTTAGGGGGTTTTTAGCTCAATTGAAAGATGCACATGTAACATATTATACACTTTCCCCTTGGCATGCTTTACCTCAGACAAATGGAAAATTGCAACAAGTTTTGGTTTTTA

Coding sequence (CDS)

ATGCTACGCCTCTACCACTCCCCTACTCTCTCCAGAGTCTTCCTCCTCCGGCGGTTTTCCTCCGCCGCCACCGCCGCCGCCCAGGTTCTCGATTCCGATCCCGAACCTTCGTTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCCAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGCAAAAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGCACTCCGAGCATCGTTTTCGAGCAAGAGGACGGCCAACATGGCGGAAATAAGCGTCTCATCTCTGTGCGGACGAATCAGATTCGGAAGCTTGTAAATCATCTCGGCCGTTCCTTCTTCCTTTCTAGGGTTTTCGATCTTGAAGTTCTGTCCGAGTTTGAGTCTGGGGATGTTGTTGAGAAGGTTCGGGTTTTACCGCGGCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTAATGTACCTCTTGTATTCCGAGGTGAAGATGTTTGTCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACTATTAAATACCTTTGCCCTGCCGATATCGTTCCTCCGTATATCGACGTCGATCTGAGCGAGTTAGATGTTGGCCAAAAGCTGGTTATGGGCGACCTCAAGGTTCATCCTGCATTAAAGCTCCTTCAGTCAAAGGACGAGCCTATTTGTAAGATTGCAGGAGCCAGAGCTGAGCAGCCTAAGAAATCAAAATAA

Protein sequence

MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPICKIAGARAEQPKKSK

Homology

[Close]

BLAST of Sed0004945 vs. NCBI nr
Match: XP_022973342.1 (uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharacterized protein LOC111474217 [Cucurbita maxima])

HSP 1 Score: 478.8 bits (1231), Expect = 3.0e-131
Identity = 240/260 (92.31%), Postives = 251/260 (96.54%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV LLRRFSSAATA A  LDSDPEPSFSYLEGFPKPDPK+AETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISVRTNQ+RKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q +KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Sed0004945 vs. NCBI nr
Match: XP_023538842.1 (uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.6 bits (1228), Expect = 6.7e-131
Identity = 241/260 (92.69%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV LLRRFSSAATA A  LDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q KKSK
Sbjct: 241 DEPVCKIAGARASDQQKKSK 260

[Close]

BLAST of Sed0004945 vs. NCBI nr
Match: XP_022950760.1 (uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothetical protein SDJN03_10150, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028444.1 rplY [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130
Identity = 240/260 (92.31%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV LLRRFSSAATA A  LDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q +KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Sed0004945 vs. NCBI nr
Match: XP_022147798.1 (uncharacterized protein LOC111016648 [Momordica charantia])

HSP 1 Score: 461.5 bits (1186), Expect = 4.9e-126
Identity = 231/260 (88.85%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTL+RV LLRRFSSAATAA  VLDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAA--VLDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV  EFESG+++EKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPL+FRGEDV
Sbjct: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+T+KYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPICKIAGAR-AEQPKKSK 260
           DEP+CKIAGAR ++Q +KSK
Sbjct: 241 DEPVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Sed0004945 vs. NCBI nr
Match: XP_038903089.1 (50S ribosomal protein L25 [Benincasa hispida])

HSP 1 Score: 461.1 bits (1185), Expect = 6.4e-126
Identity = 238/260 (91.54%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV  LRRFSSAAT  A VLDS  EP  SYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRV--LRRFSSAAT--APVLDSYSEPPLSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLH+GTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHSGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q KKSK
Sbjct: 241 DEPVCKIAGARASDQQKKSK 256

[Close]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot
Match: Q219F9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplY PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 60/187 (32.09%), Postives = 101/187 (54.01%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKR--LISVRTNQIRKLVNHLGRSF 116
           A  R   GK  +  ER+AGR P +++       G NK    ISV   ++R  +   GR  
Sbjct: 9   ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDDTELRARI-LAGR-- 68

Query: 117 FLSRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLV 176
           FL+ +FD+E+          +K RV+PR  HL    D P++V F+R    AL++V+VPL 
Sbjct: 69  FLTTIFDVELDG--------QKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLH 128

Query: 177 FRGEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPAL 236
            +  +  PG+++G  +N +  T++    A+ +P +I+ D+S+LD+G  L + D+ +   +
Sbjct: 129 LKNAEGAPGVKRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGV 177

Query: 237 KLLQSKD 242
           K L  +D
Sbjct: 189 KTLSRED 177

[Close]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot
Match: Q3SPM6 (50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=rplY PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-20
Identity = 62/194 (31.96%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK---RLISVRTNQIRKLVNHLGRS 116
           A  R  SGK  +  ER+AGR P++++        GNK   + ISV   ++R+ +   GR 
Sbjct: 9   ATARPKSGKGAARAERRAGRVPAVIY--------GNKQPPQPISVEEPELRQRI-LAGR- 68

Query: 117 FFLSRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPL 176
            FL+ +FD+ +          +K RV+PR  HL    D P++V F+R    A ++V+VPL
Sbjct: 69  -FLTTIFDINLDG--------KKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPL 128

Query: 177 VFRGEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPA 236
                DV PG+++G  +N +   I   C A+ +P +I+ D+  L++   L + DL++ P 
Sbjct: 129 RLLKADVAPGVKRGGTVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPG 183

Query: 237 LKLLQSKDEPICKI 248
           +K L  +D  +  I
Sbjct: 189 VKPLAREDVTLVTI 183

[Close]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot
Match: Q2ISF7 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=rplY PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20
Identity = 63/193 (32.64%), Postives = 101/193 (52.33%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK--RLISVRTNQIRKLVNHLGRSF 116
           A  R  SGK  +  ER+AGR P +++       G NK    ISV    +R  +   GR  
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNKPPLPISVEDKDLRLRI-QAGR-- 68

Query: 117 FLSRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLV 176
           FL+ +FD+ VL         +K RV+PR  HL    D P++V F+R    A ++++VPL 
Sbjct: 69  FLTTIFDV-VLDG-------QKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLH 128

Query: 177 FRGEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPAL 236
            +G +  PG+++G   N +  T+    PAD +P +I+ D+S LD+G  L + D+ +   +
Sbjct: 129 LKGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGV 183

Query: 237 KLLQSKDEPICKI 248
           K +  +D  +  I
Sbjct: 189 KSVSREDVTLVTI 183

[Close]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot
Match: Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3)

HSP 1 Score: 99.4 bits (246), Expect = 6.5e-20
Identity = 59/191 (30.89%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 117 SRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFR 176
           + VFD+ VL         +K RV+PR  HL    D P++V F+R  + A ++V+VPL  +
Sbjct: 69  TTVFDV-VLDG-------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKL 236
           G +V PG+++G   N +  T++   PA+ +P +I+ D+S LD+G  L + D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 183

Query: 237 LQSKDEPICKI 248
           +   D  +  I
Sbjct: 189 VSRDDVTLVTI 183

[Close]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot
Match: B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.5e-20
Identity = 59/191 (30.89%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 117 SRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFR 176
           + VFD+ VL         +K RV+PR  HL    D P++V F+R  + A ++V+VPL  +
Sbjct: 69  TTVFDV-VLDG-------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKL 236
           G +V PG+++G   N +  T++   PA+ +P +I+ D+S LD+G  L + D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 183

Query: 237 LQSKDEPICKI 248
           +   D  +  I
Sbjct: 189 VSRDDVTLVTI 183

[Close]

BLAST of Sed0004945 vs. ExPASy TrEMBL
Match: A0A6J1ICC4 (uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 240/260 (92.31%), Postives = 251/260 (96.54%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV LLRRFSSAATA A  LDSDPEPSFSYLEGFPKPDPK+AETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISVRTNQ+RKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q +KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Sed0004945 vs. ExPASy TrEMBL
Match: A0A6J1GGM6 (uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC111453766 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.2e-131
Identity = 240/260 (92.31%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTLSRV LLRRFSSAATA A  LDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV SEFESGD+VEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIKRT+KYLCPADIVPPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPICKIAGARA-EQPKKSK 260
           DEP+CKIAGARA +Q +KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Sed0004945 vs. ExPASy TrEMBL
Match: A0A6J1D2A7 (uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016648 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.4e-126
Identity = 231/260 (88.85%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLR YHSPTL+RV LLRRFSSAATAA  VLDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAA--VLDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVF 120
           SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSR+F
Sbjct: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDV 180
           DLEV  EFESG+++EKVRVLPR+IHLHAGTDAPLNVTFIRAPSHALLKV+VPL+FRGEDV
Sbjct: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+T+KYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPICKIAGAR-AEQPKKSK 260
           DEP+CKIAGAR ++Q +KSK
Sbjct: 241 DEPVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Sed0004945 vs. ExPASy TrEMBL
Match: A0A5D3DPH9 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007100 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.7e-122
Identity = 228/262 (87.02%), Postives = 242/262 (92.37%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAA--QVLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
           MLR YHSPTLSRV L RRFSSAATA A    LDS  EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 VFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGE 180
           +FDLEVLS+FESGD+VEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHA+LKV+VPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQ 240
           DVCPGLRKGSYLNTIKRT+KYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPICKIAGAR-AEQPKKSK 260
           SKDEP+CKIAGAR ++Q KKSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Sed0004945 vs. ExPASy TrEMBL
Match: A0A1S3B7N9 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.7e-122
Identity = 228/262 (87.02%), Postives = 242/262 (92.37%), Query Frame = 0


Query: 1   MLRLYHSPTLSRVFLLRRFSSAATAAA--QVLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
           MLR YHSPTLSRV L RRFSSAATA A    LDS  EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 VFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGE 180
           +FDLEVLS+FESGD+VEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHA+LKV+VPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQ 240
           DVCPGLRKGSYLNTIKRT+KYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPICKIAGAR-AEQPKKSK 260
           SKDEP+CKIAGAR ++Q KKSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Sed0004945 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 364.8 bits (935), Expect = 5.9e-101
Identity = 180/242 (74.38%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 16  LRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKAG 75
           LR FS AA AA   LD   E   +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERKAG
Sbjct: 16  LRLFSPAANAALS-LDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75

Query: 76  RTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVFDLEVLSEFESGDVVE 135
           R PSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSR+FD+EV +E  S +V+E
Sbjct: 76  RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135

Query: 136 KVRVLPRQIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDVCPGLRKGSYLNTIKR 195
           KVR LPR IHLH+GTDAPLNVTFIRAP  ALLKV++PLVF G+DV PGL+KG+ LNTIKR
Sbjct: 136 KVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKR 195

Query: 196 TIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPICKIAGARAEQP 255
           T+K+LCPA+I+PPYI+VDLS+LD+GQKLVMGDLKVHPALKL++SKDEPI K+AG R    
Sbjct: 196 TVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDT 255

Query: 256 KK 258
           +K
Sbjct: 256 QK 256

[Close]

BLAST of Sed0004945 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 356.3 bits (913), Expect = 2.1e-98
Identity = 180/255 (70.59%), Postives = 211/255 (82.75%), Query Frame = 0


Query: 16  LRRFSSAATAAAQVLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKAG 75
           LR FS AA AA   LD   E   +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERKAG
Sbjct: 16  LRLFSPAANAALS-LDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75

Query: 76  RTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRVFDLEVLSEFESGDVVE 135
           R PSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSR+FD+EV +E  S +V+E
Sbjct: 76  RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135

Query: 136 KVRVLPR-------------QIHLHAGTDAPLNVTFIRAPSHALLKVNVPLVFRGEDVCP 195
           KVR LPR             +IHLH+GTDAPLNVTFIRAP  ALLKV++PLVF G+DV P
Sbjct: 136 KVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSP 195

Query: 196 GLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 255
           GL+KG+ LNTIKRT+K+LCPA+I+PPYI+VDLS+LD+GQKLVMGDLKVHPALKL++SKDE
Sbjct: 196 GLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDE 255

Query: 256 PICKIAGARAEQPKK 258
           PI K+AG R    +K
Sbjct: 256 PIVKVAGGRVTDTQK 269

[Close]

BLAST of Sed0004945 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-38
Identity = 86/203 (42.36%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 53  ETILAIPRSISGKNISAKERKAGRTPSIVFEQE----DGQHGG--NKRLISVRTNQIRKL 112
           +TI AIPR  +G+ +SA++R  GR P++VF Q     D    G   K+L++    QI+ +
Sbjct: 34  QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93

Query: 113 VNHLGRSFFLSRVFDLEVLSEFESGDVVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAL 172
           ++ +G  FF S  F L++ +   S  +VE  RVLP ++H    T   LN+ F+ A     
Sbjct: 94  IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153

Query: 173 LKVNVPLVFRGEDVCPGLRKGSYLNTIKRTIKYLCPADIVPPYIDVDLSELDVGQKLVMG 232
           LKV+VP+VF+G D CPGL+KG  L TI+ T+K L PA+ +P  I+VD+S LD+  K+++ 
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213

Query: 233 DLKVHPALKLLQSKDE--PICKI 248
           D+  HP+LKLL SK+E  P+CKI
Sbjct: 214 DVVFHPSLKLL-SKNETMPVCKI 235

The following BLAST results are available for this feature:

BLAST of Sed0004945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973342.1	3.0e-131	92.31	uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharac...	[more]
XP_023538842.1	6.7e-131	92.69	uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo]	[more]
XP_022950760.1	1.5e-130	92.31	uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothet...	[more]
XP_022147798.1	4.9e-126	88.85	uncharacterized protein LOC111016648 [Momordica charantia]	[more]
XP_038903089.1	6.4e-126	91.54	50S ribosomal protein L25 [Benincasa hispida]	[more]

BLAST of Sed0004945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q219F9	1.7e-20	32.09	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
Q3SPM6	3.8e-20	31.96	50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 1...	[more]
Q2ISF7	4.9e-20	32.64	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 ...	[more]
Q6N1P8	6.5e-20	30.89	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG...	[more]
B3Q7X4	6.5e-20	30.89	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960...	[more]

BLAST of Sed0004945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICC4	1.4e-131	92.31	uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217...	[more]
A0A6J1GGM6	7.2e-131	92.31	uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J1D2A7	2.4e-126	88.85	uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5D3DPH9	4.7e-122	87.02	50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B7N9	4.7e-122	87.02	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1	[more]

BLAST of Sed0004945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23620.1	5.9e-101	74.38	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	2.1e-98	70.59	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT5G66860.1	2.4e-38	42.36	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, N-terminal	GENE3D	2.40.240.10	Ribosomal Protein L25; Chain P	coord: 54..161 e-value: 8.1E-8 score: 34.3
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	2.170.120.20	Ribosomal protein L25, beta domain	coord: 165..255 e-value: 1.9E-17 score: 65.3
IPR029751	Ribosomal protein L25	PFAM	PF01386	Ribosomal_L25p	coord: 57..158 e-value: 9.7E-9 score: 35.6
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 54..160 e-value: 1.71187E-12 score: 59.7914
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 167..250 e-value: 5.5E-20 score: 71.5
None	No IPR available	PANTHER	PTHR33284	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 17..257
None	No IPR available	PANTHER	PTHR33284:SF4	BNAA01G13300D PROTEIN	coord: 17..257
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	50715	Ribosomal protein L25-like	coord: 54..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004945.1	Sed0004945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome