Sed0004944 (gene) Chayote v1

Overview


Name	Sed0004944
Type	gene
Organism	Sechium edule (Chayote v1)
Description	BHLH transcription factor
Location	LG08: 33575049 .. 33576470 (+)
RNA-Seq Expression	Sed0004944
Synteny	Sed0004944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTCGCAGCGGCGCCACCGCCTCTGAAATCCCAATTCCAGCTAAACCCATGACCTACAGATGCTCTGTCTGCAACAAGATACTTTCGTCTTACAAGGCTTTCGGCGGACATATAAAATTTCTCAAATCTCTGTTTTTCATAACTTCCATTTTAACATCTATGGAGGAGAGAGAACGATTAAAAGAGGAGAGATAAACAAATACATTATTATTTTTTTTAATTTTAAAGGTGAGTTAACTCACCAGGGACCATTCTTAAATATAATTGACACTTTTTTGTTATGATAATTTTATTTTAATTTCTAACTGCGAGATGATTCAAAAATTCATACGGATATAATTTTTGTGTAGAGGAATTAGAGTCAAAATTTTGTTTGAATGTATATTTAAAAATTAGTAATTATTTTTAAGAGAAAAATTTGCCTCCTTATAGCTAAGGAGGTAAGCCCCTCCTTAATGAATATGTGGCACTATTTGATGTCACAAATTTTTTTTTTTTTTTTTTAAATAGTAGTGTTCAAATAAAAAATTTGTGGCGTCAAATGGTGTCACATACCCCACTAAGGAGGGCTTGCCTCCTTAGCTATAAGAAGACAAGTTTTTCTCTATTTTTAATGGTTAAAATAGAAATGATTAAAAATGAGTTATTTTGATTGATTTGAAATAAATGATTAAAAAATAAGTTGTTAGAAATGATTGAGTATGTTATAAATGAATAATTAAAAATGAATGGTTAGAAATGAGAGTTATTTTAAAAGTAAAATTGAGGAGGAGTTGGTAATAAAAAAACTCGTTTGGATGTAGGTTTTCGAGGAGGAGTTGATAGATCCTAATACCAACTCCTACCTTAGCCAAACAAACAGCCCCTTTGTGTTAAATGTGAGAGGCACTCCATTCATTATCTTCACCAAATGCACAATCTTCTCCATTACAAAGAAGAAGAAGAAAAACCAAGGCTATGAACCCGAACGAGCTAATTAACTCTCTCCGCTCGTTGGTTCCTAATGTATCGAGATCAACGGACAAAGCCGACGTGCTGTCCGGTGCAGTCTCGTACATCAACGAGCTGCAGACGAGGATCGAGGAGTTGGAATCTGAGCACCCGAGAGACGCGGGCGAGGAGACTTCGGAGGAAACGGAAGCAAGCTCTGGAGGGGAAGGGAGGGTGGTGGAGGTTGAAGTGAAGGCACTTGGAGAGGATCAGGCTGTGATAAGAGTTGAGAGTAAGAATTTGAGCCATGCTGGGGCCAGGCTGATGGGTGCGCTTAGAGATCTGGGCTTGAAGGTTCACCATGGAAACATGTCCAATTTGGAAGATGCAGTAACATTGCAAACTGTGGTGGTTCAAATTCCAACAGGACTTGGATCCAATCATATCAAACAAGCACTTGTTAGTAAGTTGCAGCCTAGTCCATGA

mRNA sequence

ATGGTTGCTCGCAGCGGCGCCACCGCCTCTGAAATCCCAATTCCAGCTAAACCCATGACCTACAGATGCTCTGTCTGCAACAAGATACTTTCATCAACGGACAAAGCCGACGTGCTGTCCGGTGCAGTCTCGTACATCAACGAGCTGCAGACGAGGATCGAGGAGTTGGAATCTGAGCACCCGAGAGACGCGGGCGAGGAGACTTCGGAGGAAACGGAAGCAAGCTCTGGAGGGGAAGGGAGGGTGGTGGAGGTTGAAGTGAAGGCACTTGGAGAGGATCAGGCTGTGATAAGAGTTGAGAGTAAGAATTTGAGCCATGCTGGGGCCAGGCTGATGGGTGCGCTTAGAGATCTGGGCTTGAAGGTTCACCATGGAAACATGTCCAATTTGGAAGATGCAGTAACATTGCAAACTGTGGTGGTTCAAATTCCAACAGGACTTGGATCCAATCATATCAAACAAGCACTTGTTAGTAAGTTGCAGCCTAGTCCATGA

Coding sequence (CDS)

ATGGTTGCTCGCAGCGGCGCCACCGCCTCTGAAATCCCAATTCCAGCTAAACCCATGACCTACAGATGCTCTGTCTGCAACAAGATACTTTCATCAACGGACAAAGCCGACGTGCTGTCCGGTGCAGTCTCGTACATCAACGAGCTGCAGACGAGGATCGAGGAGTTGGAATCTGAGCACCCGAGAGACGCGGGCGAGGAGACTTCGGAGGAAACGGAAGCAAGCTCTGGAGGGGAAGGGAGGGTGGTGGAGGTTGAAGTGAAGGCACTTGGAGAGGATCAGGCTGTGATAAGAGTTGAGAGTAAGAATTTGAGCCATGCTGGGGCCAGGCTGATGGGTGCGCTTAGAGATCTGGGCTTGAAGGTTCACCATGGAAACATGTCCAATTTGGAAGATGCAGTAACATTGCAAACTGTGGTGGTTCAAATTCCAACAGGACTTGGATCCAATCATATCAAACAAGCACTTGTTAGTAAGTTGCAGCCTAGTCCATGA

Protein sequence

MVARSGATASEIPIPAKPMTYRCSVCNKILSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPSP

Homology

[Close]

BLAST of Sed0004944 vs. NCBI nr
Match: XP_038890552.1 (transcription factor MYC3-like [Benincasa hispida])

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-21
Identity = 64/117 (54.70%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRVVEVEVKA 89
           +S  DKA +LS A+SYINELQ +I E+ES   +  G E  EE  +S     +V+E++VK 
Sbjct: 194 VSRMDKASLLSNAISYINELQKKISEMESRVLKKKGVEEMEEEASSRDEREKVIEIDVKI 253

Query: 90  LGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTG 147
           +G DQAVIRV++KN+S+A A+LM ALRDL LKV H +MSNL+D +TLQ +VV+IP+G
Sbjct: 254 IGGDQAVIRVQTKNVSYAVAKLMEALRDLELKVRHASMSNLQD-LTLQDLVVEIPSG 309

[Close]

BLAST of Sed0004944 vs. NCBI nr
Match: XP_008441948.1 (PREDICTED: transcription factor MYC3-like [Cucumis melo] >KAA0061409.1 transcription factor MYC3-like [Cucumis melo var. makuwa] >TYK28669.1 transcription factor MYC3-like [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-20
Identity = 71/140 (50.71%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVE 89
           +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E
Sbjct: 172 VSRMDKASLLSDAVSYINELEMKISEMESRVSKKKKKNGVDENEMEEEASSRDRRERGIE 231

Query: 90  VEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIP 149
           ++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV HG+M N +D +TLQ +VV++P
Sbjct: 232 IDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLGLKVEHGSMWNWKD-LTLQDLVVRVP 291

Query: 150 TGLG---SNHIKQALVSKLQ 162
           +G G      IK+AL++ L+
Sbjct: 292 SGHGYCSDEGIKRALLAILE 310

[Close]

BLAST of Sed0004944 vs. NCBI nr
Match: XP_031736394.1 (transcription factor bHLH14-like [Cucumis sativus] >KGN61317.1 hypothetical protein Csa_005925 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRV 89
           +S  DKA +LS AVSYINEL+ +I E+ES       E      E   EE  +S     R 
Sbjct: 173 VSRMDKASLLSDAVSYINELEMKISEMESRVLKEKKEKKNGVDENEMEEEASSRDRRERG 232

Query: 90  VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQ 149
           +E++VK +G D+AVIRVES+NLS+A A+LM ALRDL LKV HG+M NL+D +TLQ +VV+
Sbjct: 233 IEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLELKVEHGSMWNLKD-LTLQDLVVR 292

Query: 150 IPTGLG---SNHIKQALVSKLQ 162
           +P+G G      IK+AL++ L+
Sbjct: 293 VPSGHGYSSDEGIKKALLAILE 313

[Close]

BLAST of Sed0004944 vs. NCBI nr
Match: XP_020588981.1 (transcription factor MYC3-like [Phalaenopsis equestris])

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-18
Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSG-------GEGRV 89
           +S  DKA +L+ AVSYI +L+ ++EELE E  R   E   E+  +S G        E   
Sbjct: 282 VSRMDKASLLADAVSYIKDLRAKLEELEVEVKRSKKEVIVEQGNSSGGSPTSGLTSEPAT 341

Query: 90  VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQ 149
           VEVEVK LG D A+IRV+S+NL+H  ARLM ALRDL L VHH  +S  ++A+ +Q VVV+
Sbjct: 342 VEVEVKLLGHD-AIIRVQSENLTHPPARLMAALRDLDLLVHHATVSGYKEAIMIQDVVVR 401

Query: 150 IPTGL-GSNHIKQALVSKLQ 162
           +P  L G  +++ AL+ +LQ
Sbjct: 402 VPDALMGEENLRSALLVRLQ 420

[Close]

BLAST of Sed0004944 vs. NCBI nr
Match: XP_023880894.1 (transcription factor MYC2-like [Quercus suber])

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-18
Identity = 65/148 (43.92%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE---------------ETSEETEA 89
           +S  DKA +LS AVSYINEL+T+I+ELES+  R++ +                + ++T+ 
Sbjct: 351 VSRMDKASLLSDAVSYINELKTKIDELESQLQRESKKVKLEMTDTMDNQSTTTSVDQTKP 410

Query: 90  SSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAV 149
           ++   G V+EVEVK +G D A+IR++S+N+++ GARLMGALRDL  +VHH +MS + + +
Sbjct: 411 NNTNSGSVLEVEVKMVGPD-AMIRLQSENVNYPGARLMGALRDLEFQVHHASMSCVNE-L 470

Query: 150 TLQTVVVQIPTGL-GSNHIKQALVSKLQ 162
            LQ VVV++P GL G   +K AL+ +L+
Sbjct: 471 MLQDVVVKVPEGLRGEEALKSALLGRLE 496

[Close]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot
Match: O23090 (Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS------- 89
           +S  DKA +LS AVSYI  L+++I++LE+E  +      D  + +S  T  SS       
Sbjct: 275 VSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQ 334

Query: 90  ----GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLED 149
                  G  +EV+VK +GE +A+IRV+++N++H  + LM AL ++  +V H N S L  
Sbjct: 335 KPSKSNRGSDLEVQVKIVGE-EAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQ 394

Query: 150 AVTLQTVVVQIPTGLGS-NHIKQALVSKL 161
            V +Q VVV +P GL S + ++  LV  L
Sbjct: 395 -VMVQDVVVLVPEGLRSEDRLRTTLVRTL 421

[Close]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot
Match: A0A3Q7HRZ6 (Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHP------RDAGEET---------SEETEA 89
           +S  DKA +L  A+SYINEL+++++  ES+         D  +E+         +++ + 
Sbjct: 539 VSKMDKASLLGDAISYINELKSKLQNTESDKEDLKSQIEDLKKESRRPGPPPPPNQDLKM 598

Query: 90  SSGGEGRVVEV--EVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLED 149
           SS   G++V+V  +VK +G D A+IR++    +H  ARLM AL +L L VHH ++S + D
Sbjct: 599 SSHTGGKIVDVDIDVKIIGWD-AMIRIQCNKKNHPAARLMAALMELDLDVHHASVSVVND 658

Query: 150 AVTLQTVVVQIPTGLGSNHIKQALVSKL 161
            +  Q  V           ++ AL SK+
Sbjct: 659 LMIQQATVKMGSRHYTEEQLRVALTSKI 685

[Close]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot
Match: Q9LUK7 (Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV------- 89
           +S  DK  +L  AV YINEL+++ E +E E  + A E    E +  +G    +       
Sbjct: 369 VSKMDKTSLLEDAVCYINELKSKAENVELE--KHAIEIQFNELKEIAGQRNAIPSVCKYE 428

Query: 90  ------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTL 149
                 +++EVK +  D A++RVES+   H GARLM AL DL L+V+H ++S + D +  
Sbjct: 429 EKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQ 488

Query: 150 QTVVVQIPTGLGSNHIKQALVSKL 161
           Q  V           ++  L+SK+
Sbjct: 489 QANVKMGLRIYKQEELRDLLMSKI 510

[Close]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot
Match: Q9FIP9 (Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETE 89
           +S  DKA +L  A+SYINEL++++++ ES+                + +  G    E   
Sbjct: 441 VSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKS 500

Query: 90  ASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLE 149
           ++       +E+E  VK +G D  +IRV+     H GAR M AL++L L+V+H ++S + 
Sbjct: 501 SNQDSTASSIEMEIDVKIIGWD-VMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVN 560

Query: 150 DAVTLQTVVVQIPTGLGSNHIKQALVSKL 161
           D +  Q  V         + +K AL++K+
Sbjct: 561 DLMIQQATVKMGSQFFNHDQLKVALMTKV 588

[Close]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot
Match: A0A060KY90 (Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRI-------EELESEHPRDAGEETSEETEASSGG---- 89
           +S  DKA +L  A++YINEL++++       EEL S+      E T++ +   S      
Sbjct: 483 VSKMDKASLLGDAIAYINELKSKVQNSDLDKEELRSQIECLRKELTNKGSSNYSASPPLN 542

Query: 90  -EGRVV--EVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVT 149
            + ++V  +++VK +G D A+IR++    +H  ARLM AL+DL L VHH ++S + D + 
Sbjct: 543 QDVKIVDMDIDVKVIGWD-AMIRIQCSKKNHPAARLMAALKDLDLDVHHASVSVVNDLMI 602

Query: 150 LQTVVVQIPTGLGSNHIKQALVSKLQPS 164
            Q  V           ++ AL SK+  S
Sbjct: 603 QQATVKMGSRLYAQEQLRIALTSKIAES 629

[Close]

BLAST of Sed0004944 vs. ExPASy TrEMBL
Match: A0A5A7V6X0 (Transcription factor MYC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00380 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20
Identity = 71/140 (50.71%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVE 89
           +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E
Sbjct: 172 VSRMDKASLLSDAVSYINELEMKISEMESRVSKKKKKNGVDENEMEEEASSRDRRERGIE 231

Query: 90  VEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIP 149
           ++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV HG+M N +D +TLQ +VV++P
Sbjct: 232 IDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLGLKVEHGSMWNWKD-LTLQDLVVRVP 291

Query: 150 TGLG---SNHIKQALVSKLQ 162
           +G G      IK+AL++ L+
Sbjct: 292 SGHGYCSDEGIKRALLAILE 310

[Close]

BLAST of Sed0004944 vs. ExPASy TrEMBL
Match: A0A1S3B4K7 (transcription factor MYC3-like OS=Cucumis melo OX=3656 GN=LOC103485944 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20
Identity = 71/140 (50.71%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVE 89
           +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E
Sbjct: 172 VSRMDKASLLSDAVSYINELEMKISEMESRVSKKKKKNGVDENEMEEEASSRDRRERGIE 231

Query: 90  VEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIP 149
           ++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV HG+M N +D +TLQ +VV++P
Sbjct: 232 IDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLGLKVEHGSMWNWKD-LTLQDLVVRVP 291

Query: 150 TGLG---SNHIKQALVSKLQ 162
           +G G      IK+AL++ L+
Sbjct: 292 SGHGYCSDEGIKRALLAILE 310

[Close]

BLAST of Sed0004944 vs. ExPASy TrEMBL
Match: A0A0A0LKN8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G080170 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.5e-20
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRV 89
           +S  DKA +LS AVSYINEL+ +I E+ES       E      E   EE  +S     R 
Sbjct: 173 VSRMDKASLLSDAVSYINELEMKISEMESRVLKEKKEKKNGVDENEMEEEASSRDRRERG 232

Query: 90  VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQ 149
           +E++VK +G D+AVIRVES+NLS+A A+LM ALRDL LKV HG+M NL+D +TLQ +VV+
Sbjct: 233 IEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLELKVEHGSMWNLKD-LTLQDLVVR 292

Query: 150 IPTGLG---SNHIKQALVSKLQ 162
           +P+G G      IK+AL++ L+
Sbjct: 293 VPSGHGYSSDEGIKKALLAILE 313

[Close]

BLAST of Sed0004944 vs. ExPASy TrEMBL
Match: A0A2N9EQ73 (BHLH domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4596 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.0e-18
Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETE---------------- 89
           +S  DKA +LS AVSYINEL+T+++ELES+  RD+ +   E T+                
Sbjct: 338 VSRMDKASLLSDAVSYINELKTKVDELESQLQRDSKKVKLEMTDTMDNQSTTTSVDQTRP 397

Query: 90  --ASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLE 149
              +S G G V+EVEVK +G D A+IRV+S+N+++  ARLMGALRDL  +VHH +MS + 
Sbjct: 398 NNTNSSGSGLVLEVEVKMVGVD-AMIRVQSENVNYPPARLMGALRDLEFQVHHASMSCVN 457

Query: 150 DAVTLQTVVVQIPTGLGSN-HIKQALVSKLQ 162
           D + LQ VVV++P GL +   +K AL+ +L+
Sbjct: 458 D-LMLQDVVVKVPEGLRTEAALKTALLGRLE 486

[Close]

BLAST of Sed0004944 vs. ExPASy TrEMBL
Match: A0A513X4W6 (Transcription factor MYC3-like isoform X1 OS=Cymbidium sinense OX=112615 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.8e-18
Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGG-------EGRV 89
           +S  DKA +L+ AVSYI +L+ ++EELE+E  R   E   E+   S G        E   
Sbjct: 277 VSRMDKASLLADAVSYIKDLRAKVEELEAEAKRSKKEVVVEQGNNSGGTPTSGLSCEPAT 336

Query: 90  VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQ 149
           +EVEVK LG D A+IRV S+NL+H  ARLM ALRDL L VHH  +S  ++ + +Q VVV+
Sbjct: 337 IEVEVKLLGHD-AIIRVRSENLAHPPARLMTALRDLELVVHHATVSGYKEVMMIQDVVVR 396

Query: 150 IPTG-LGSNHIKQALVSKLQPS 164
           +P   LG ++++ AL+ +LQ S
Sbjct: 397 VPEALLGDDNLRSALLVRLQKS 417

[Close]

BLAST of Sed0004944 vs. TAIR 10
Match: AT4G00870.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-13
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS------- 89
           +S  DKA +LS AVSYI  L+++I++LE+E  +      D  + +S  T  SS       
Sbjct: 275 VSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQ 334

Query: 90  ----GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLED 149
                  G  +EV+VK +GE +A+IRV+++N++H  + LM AL ++  +V H N S L  
Sbjct: 335 KPSKSNRGSDLEVQVKIVGE-EAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQ 394

Query: 150 AVTLQTVVVQIPTGLGS-NHIKQALVSKL 161
            V +Q VVV +P GL S + ++  LV  L
Sbjct: 395 -VMVQDVVVLVPEGLRSEDRLRTTLVRTL 421

[Close]

BLAST of Sed0004944 vs. TAIR 10
Match: AT1G32640.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE------ETSEETEASSGGEGRV- 89
           +S  DKA +L  A++YINEL++++ + ESE  +   +      E +    ++SGG+    
Sbjct: 478 VSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSS 537

Query: 90  --------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAV 149
                   +E+EVK +G D A+IRVES   +H  ARLM AL DL L+V+H +MS + D +
Sbjct: 538 CSSIKPVGMEIEVKIIGWD-AMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLM 597

Query: 150 TLQTVVVQIPTGLGSNHIKQALVSKL 161
             Q  V           ++ +L+SK+
Sbjct: 598 IQQATVKMGFRIYTQEQLRASLISKI 622

[Close]

BLAST of Sed0004944 vs. TAIR 10
Match: AT5G46830.1 (NACL-inducible gene 1 )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV------- 89
           +S  DK  +L  AV YINEL+++ E +E E  + A E    E +  +G    +       
Sbjct: 369 VSKMDKTSLLEDAVCYINELKSKAENVELE--KHAIEIQFNELKEIAGQRNAIPSVCKYE 428

Query: 90  ------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVTL 149
                 +++EVK +  D A++RVES+   H GARLM AL DL L+V+H ++S + D +  
Sbjct: 429 EKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQ 488

Query: 150 QTVVVQIPTGLGSNHIKQALVSKL 161
           Q  V           ++  L+SK+
Sbjct: 489 QANVKMGLRIYKQEELRDLLMSKI 510

[Close]

BLAST of Sed0004944 vs. TAIR 10
Match: AT5G46760.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETE 89
           +S  DKA +L  A+SYINEL++++++ ES+                + +  G    E   
Sbjct: 441 VSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKS 500

Query: 90  ASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLE 149
           ++       +E+E  VK +G D  +IRV+     H GAR M AL++L L+V+H ++S + 
Sbjct: 501 SNQDSTASSIEMEIDVKIIGWD-VMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVN 560

Query: 150 DAVTLQTVVVQIPTGLGSNHIKQALVSKL 161
           D +  Q  V         + +K AL++K+
Sbjct: 561 DLMIQQATVKMGSQFFNHDQLKVALMTKV 588

[Close]

BLAST of Sed0004944 vs. TAIR 10
Match: AT4G17880.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09
Identity = 46/149 (30.87%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 30  LSSTDKADVLSGAVSYINELQTRIEELESEHP----------RDAGE-ETSEETEASSGG 89
           +S  DKA +L  A+SYI+EL++++++ ES+            ++AG  ++S +       
Sbjct: 442 VSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQ 501

Query: 90  EGRV---VEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSNLEDAVT 149
           E  V   +EV+VK +G D A+IR++    +H GA+ M AL++L L+V+H ++S + D + 
Sbjct: 502 ESSVLIEMEVDVKIIGWD-AMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMI 561

Query: 150 LQTVVVQIPTGLGSNHIKQALVSKLQPSP 165
            Q  V         + +K AL  K+   P
Sbjct: 562 QQATVKMGNQFFTQDQLKVALTEKVGECP 589

The following BLAST results are available for this feature:

BLAST of Sed0004944 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890552.1	3.6e-21	54.70	transcription factor MYC3-like [Benincasa hispida]	[more]
XP_008441948.1	6.7e-20	50.71	PREDICTED: transcription factor MYC3-like [Cucumis melo] >KAA0061409.1 transcrip...	[more]
XP_031736394.1	1.1e-19	49.30	transcription factor bHLH14-like [Cucumis sativus] >KGN61317.1 hypothetical prot...	[more]
XP_020588981.1	2.2e-18	46.43	transcription factor MYC3-like [Phalaenopsis equestris]	[more]
XP_023880894.1	4.8e-18	43.92	transcription factor MYC2-like [Quercus suber]	[more]

BLAST of Sed0004944 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23090	5.4e-12	36.91	Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1	[more]
A0A3Q7HRZ6	1.5e-09	32.43	Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1	[more]
Q9LUK7	5.5e-09	32.64	Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1	[more]
Q9FIP9	1.6e-08	29.53	Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1	[more]
A0A060KY90	2.1e-08	32.43	Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1	[more]

BLAST of Sed0004944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6X0	3.3e-20	50.71	Transcription factor MYC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B4K7	3.3e-20	50.71	transcription factor MYC3-like OS=Cucumis melo OX=3656 GN=LOC103485944 PE=4 SV=1	[more]
A0A0A0LKN8	5.5e-20	49.30	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G080170 PE=4 S...	[more]
A0A2N9EQ73	4.0e-18	45.03	BHLH domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4596 PE=4...	[more]
A0A513X4W6	6.8e-18	45.07	Transcription factor MYC3-like isoform X1 OS=Cymbidium sinense OX=112615 PE=2 SV...	[more]

BLAST of Sed0004944 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00870.1	3.8e-13	36.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G32640.1	2.7e-11	34.25	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G46830.1	3.9e-10	32.64	NACL-inducible gene 1	[more]
AT5G46760.1	1.1e-09	29.53	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT4G17880.1	2.6e-09	30.87	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..81
None	No IPR available	PANTHER	PTHR11514:SF40	TRANSCRIPTION FACTOR BHLH14	coord: 31..160
IPR045084	Transcription factor AIB/MYC-like	PANTHER	PTHR11514	MYC	coord: 31..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004944.1	Sed0004944.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005488	binding
molecular_function	GO:0003700	DNA-binding transcription factor activity