Sed0004930 (gene) Chayote v1

Overview


Name	Sed0004930
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein OSB2, chloroplastic-like
Location	LG07: 3459509 .. 3464639 (-)
RNA-Seq Expression	Sed0004930
Synteny	Sed0004930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCTTGGCCCCAAAAGTTTGGCGCGCGCAGAAACACAGTCGAAAATAAGATCGAAATCGAGAGCTCTGATAATGGCGCTATGGCGAACCCTAACTCTTTCCTCATCACTGTTATCGAAATGCTCCATCCATCAAACCAAGCTTCCAATCGCTTCTCTCTTCCCATTTCCCTCTCATTTGCACGCTGCTAAACCGCTCCAATTCGCCACCCATTTCCCTAAATCCTCATCTACGGAAAGCTACCCTAAACCCTCCGAAATTCCATGGAACAAGGAGCTCTGTAACTCCGTGAGTCTCATTGGGACCGTTGGTGTGCCTGTTGGGCTCAAGCGCCTCGCCTCTGGCAAGGATTTGGCCTGGACCCGACTCGCCGTTTGGAAGTCCTCGACTGAAACCACTTGGTACTGTTCTCTTAGTTCTTTTTCTTTTTTTTAAATGTCATTTTTGTTTTTCCCTTTTTTTGTGGTGAGTTGATGAAATTGTTTGCAAAATTTGAAGAATAAGGTACTGATATTGTTATAAATTTGAGATGTTTAGAATGTGGAAATTTTGTGGAGCTCTCAAAATTGGTGTCCCAATTTTAGAAAGAAACCATATGATCTTAAAACTGGTGAGCTTATTCCAGGAAAAATGATAAACGACGACTTGGAAGGAAATTGCGAGAATGGCTCGTTTGGGCGTAGAGCGTGAGGATATGTGGAATTTCACACATTTTAATATCTTATCAATGGCTGTTATTTTGTAATTTTGCCTCCTCTTTTGGTTCTGTATTTTTTTCTCTAGCTTTTGCTTTTTATTGATAAAAGTTCTTATAAAAAAAAGTTCTTTTCTTATTTTTGGAAGGAGGAACTATTTCTTTGAAAAGATGAATTAAAGGAGATCAATTCCGAGCATCTAATGGCGAATGACAAAAAGGACTTTCAATTCGAAATGTTAGTTTCTTGTCTGTTGTATTATAGGAGTTTTACTTATTTCATTTCTATAAATGATCAGTTCTCATTTGAAGCAAATATTATCTGCCAGTACATCCTAGAACGATTTCGTTCCAACCATCTCTAGGCTCTACTCTGGGACCCATCTCAGCTTCCAAATTGTCGGGCCTTTCACCATATTTAACTGATTAACCATCCAATGATCCAACATTTTTGTAATTTTGTTATATGTGTTGGTGTTGGAAGTTTTTAGAGTTTGGTAAGGTAATAGAGTGGTAGCAATATGTTTGATATGGAGTACTTTGGGTTGGCCTAATTGTCACTTGAACAAGTGAACAAGTAAAGAAGTCCCTTTGGTAGTTCTTCCTACATGGAAATCTTCTACAAGGCTTTCTTGGTCGCTTTTGAGGTTGCTCAAAAATCCCATCCACTATGGATAAGAGGAAATGAGAAAGAGGGTCATCCTAATGAATTTCCCTAGTACTTGGTAGTTCACTCCTTCTTCTGTTGAAGGCCTTAGAGATGATATCACGAATACTCATCTCTAAACTGGTGGGTTCAAGATCTAGATCTAGACCTCTTGGGAATCAAGAAAACGTGAGCTGGTCGGTGTATCTCTCGAGGTACTCCTACATTCTTCTAAATCTCTTTCTCTTATGTCGTCCTCTAATCCATCCGCTTTTTTGTGGTTAGAAAGAAATTAAAGGATTTTTTGGATGAAGGAGAAGGCCTACCTAGTTGATCTTCTTTAACAATGTTCTTTTCCTTGCTCTATCATGGTGTAAATTGAATTCTCCTATTTCTTGTAGTTTTGCCCTTCATTTGTCCAATTGGACAAGTTTAATGTAACTCCATATTAGAGCCTTTCATACACTTTTTCTTTTGTAAATTTCATACATTTCTTATTCCAAACAAAGTACCTTACAAATTGAATTCTTTTTAAGAGATTATGCCTGAAAACTAAAAATCACTTTCTTAAACTTCTCCAAAGTGAAAGGTTTAATTGAGGGTCTCTTGTTCCCTTTCACTAAGGACTGGCAAAAACAGATAATGCTTTAGCTTTGATCTTGTTTATAATCTCCTCCAAAGTTGTCATCTTGTTAAAAATCTCGTGTAAAACTTGATTATCCCCTAAAACATTCAAGTTCCACCCGTCTCTAATTTGCGCCTTTCTTTATCTGTGCCAATGCTTCTTTAAGTCATCTAGAAATTTTCCATTCAGCCCAGTATGTGCAGGGCTCTACCTTCCTTTAATTTTTTTGAAGGAAATATATTGACATTAAAACCAACTGTTAGACACCAAGCCTTTTCCCGATATATAAATCTTTCAATTCATTATCAATCTACCTATTTAAGAAATCTCATTAAATTTTAATACTAATCTTCACGCTAGGGACTGAATCATTATAATTTTTAATTTGTAAGGACTAAATCATTACATACTAAAGTTGATGGACTAAGTTACTTCCATCAAACTTTAGGGACCAAAAGTGATTTGTAACCAAACTCTAAGAGATACAACATGACATTTCAACCTGTAAGTGTTCAAATATGAAGACAGTTAGGACTTAGGAGAAGAAATCGGATATAAACAATAATTGCCTAATTTTCTTATCTTATAATCCATGGATATAAGTATAACTATCCACATCAATATCTTGCTGGGATTTGTATTTTCCTATTCTAATATGAATATTCGGCCATTTCAGGGTAAATTTAGCATTTTGGAATGAACTGGCCCATGTTGCTTTTCAACATGTCCAGAAAGGCAACCTGATATATGTATCTGGCCGGCTGGTAGCAGATCTTGTCGAAGCTAATGATGTGAAAGGGCAAACATACTACAAGGTTTTGTTATCCCTGTTCACTTTGCTCCATGGTTTCTGTTATTTCCTGAAGTAGATACTGATGCTTTCTATATATTTTGCAGGTAGTAGTTCAGCAACTGAATTTTATAGACAGAAGCTACGCAACAGCACCCAATTATGACCAGAACTCTAATTCCGAAATGACAGGCATGAGATGTTCTTTAATTTAAGAAGGTCGTCACCACTCATATTGCAAAATCAGCCAAAATAATAGAAAACTCTAAAAATGTGGAAAAAATTAAAAGTTGTTCATGTAAAAAGACTAAAAATACTTCTCATCACTAATAGGAGTTAAACAAATCAAGAAAAGGTGAATACAAATTTATTCTGAAAAGTCATGAACGTAATATCATGTTGGTGAACGTAGGTCAGCAAACCAAAAAATCAAGTGCAAAACTCGATCAAAATGATGCAAACGAAGTTTGAATGAACAATCACAATTGATCATAGCAGAGTGTCTCCAAGGGATGACGCAGTAGTTGAAAACTTGGACTTTGAGACTATGCTCCCCTTAAGGTCCCAAGTTTGAGACTCACCTGTAACATTACCCTTGTTTAAAAAAAAATGATCATAGTTGAGAAATTTGGCAAAGGTAGGACAAAAACGGCTAAAAATGGGCAATCAAATAACGCACTCAATTAGAGAGCATAACTGAAGAAGCCAACTCAATCGTAAAGCCGTAAGGAAGAAGAAGAAAACACTTGTGCTTACCCTCCTTCAAAATAAGTGTTTAAGAGGAATGACATAATATTATTTGAAAGATTTGCCATATTTACACATAAAGGGACCTAACTTGCTACCCATTACAATTCTCTTAAGATTATTGCTATGATAGTTTATGTTGTTTCGGGATCTTATTGTTTGGTGTCTTATCACATCTCTTTGCAGGGGCTAAGCTTGGCACTAGCGGTGGTGCCGTTGAAGAATTATGGAAAGCATTCTTTGCTAATCCCGCCGTCTGGTGGGACAACAGGAATAATAAGGTACTTCATTTATTCTCTTGCAATTTTTAAGATTCAATTATCTTTTTTTAGGAATGCATATTTTCTTAACATAGATCAAGTCTGGTATTTGCTTGTGCTTTTATGGCCAAGAAACAAGTGAAGCTTTTCAATATTGCATGAAAAAACCTGAGGAGCTTATGAACTTCCTACAAGCTGCATGTATAATGGCATATATTTTATGCATGTTATTACTCGTATGGCAGAAGGCAAGCATCTTGAATGATTGCATTTTTTTATACGAAACAATTTCATTGATCATATGAAATCACAAAAGAGGTAAGGGGAGAGTCAAGTTTGAAGTCAACCCAAGACTTAAAAAGCTCTTCCTACTATCAAAAGGACATTTAAGAACCATCATGGAGTGGCTCAATTGGTCAAAGAGAGCCTTGAGGTGCATAAGGTGATGAGTTCAATCTATGGTGGCCATCTACCTAGGAATTAATTTCATGCAGGTTTCCTTGGCATCCAAATGTTATAGGGTCAGGCGGTCTGTTTTATGACATTAGTCGAAGTGCGCAAAAGCTAGCTTGTACAGTCACGGATATAAAAAAAGGGCATTTAAGCTTTAGTTGTTGAAAGAAGTACGAAAGCGCACCTCAGGAAGTCATAATCAGACTGTATTTTAGTTGTCATATCTAAATGTTATTACTTATTGCATATATAAAATGGCTGACCTCAATGATTTAAAAGGGAAAAATGGATTAGTATCCTTTTTTTGCATGCTACCTTAGAAATTCCAAAAGTTATCATTTGTAAGTATTTGTAGGTTTCCTTCACACCTTAATGAGAGATGAGGTCCACACCTTAGTGTTAATACATTGGACATTTGATTCTATTTGCAGAAGAACCCTAAATATCCAGACTTTAAGTGCAAGGACACTGGGGAAGCCTTATGGGTCGAGGACAGGTACAATCCACCTTGGGTGAAGCCCCAACTGGCAATGTTGGACATGAAAAAGGCTTCTCTTGATGAGCAGGAAGCTACAATGGCAAAACTTTATAGCTAGTTTTGATTTTACAAGGCCTCATATTATTCATACACACTTTTGTAAGGGTAAAATGGGAATAAGGAAGTAAGATTAGTAACTTCGTTTGTTATAAGGGTTTTATAAGGGGTTTTGTGTGCTGCTGATAGGGTGTGGATTTTTGTAGACCAGTCTTGTCTGGGAAGGAGATGGCAGCCCTCTATAATAGAAGTGGTGTCCTTTTGTAGTTACTTTGCTTTGTGGTTATTCATAAATGAATCATAACACCATTTGTATATTAAAGAACTACCAATATTATAGAGATGGTCTTCGAAGGGTGGCGCAGTGGTTGAAAATTTG

mRNA sequence

AATTCCTTGGCCCCAAAAGTTTGGCGCGCGCAGAAACACAGTCGAAAATAAGATCGAAATCGAGAGCTCTGATAATGGCGCTATGGCGAACCCTAACTCTTTCCTCATCACTGTTATCGAAATGCTCCATCCATCAAACCAAGCTTCCAATCGCTTCTCTCTTCCCATTTCCCTCTCATTTGCACGCTGCTAAACCGCTCCAATTCGCCACCCATTTCCCTAAATCCTCATCTACGGAAAGCTACCCTAAACCCTCCGAAATTCCATGGAACAAGGAGCTCTGTAACTCCGTGAGTCTCATTGGGACCGTTGGTGTGCCTGTTGGGCTCAAGCGCCTCGCCTCTGGCAAGGATTTGGCCTGGACCCGACTCGCCGTTTGGAAGTCCTCGACTGAAACCACTTGGGTAAATTTAGCATTTTGGAATGAACTGGCCCATGTTGCTTTTCAACATGTCCAGAAAGGCAACCTGATATATGTATCTGGCCGGCTGGTAGCAGATCTTGTCGAAGCTAATGATGTGAAAGGGCAAACATACTACAAGGTAGTAGTTCAGCAACTGAATTTTATAGACAGAAGCTACGCAACAGCACCCAATTATGACCAGAACTCTAATTCCGAAATGACAGGGGCTAAGCTTGGCACTAGCGGTGGTGCCGTTGAAGAATTATGGAAAGCATTCTTTGCTAATCCCGCCGTCTGGTGGGACAACAGGAATAATAAGAAGAACCCTAAATATCCAGACTTTAAGTGCAAGGACACTGGGGAAGCCTTATGGGTCGAGGACAGGTACAATCCACCTTGGGTGAAGCCCCAACTGGCAATGTTGGACATGAAAAAGGCTTCTCTTGATGAGCAGGAAGCTACAATGGCAAAACTTTATAGCTAGTTTTGATTTTACAAGGCCTCATATTATTCATACACACTTTTGTAAGGGTAAAATGGGAATAAGGAAGTAAGATTAGTAACTTCGTTTGTTATAAGGGTTTTATAAGGGGTTTTGTGTGCTGCTGATAGGGTGTGGATTTTTGTAGACCAGTCTTGTCTGGGAAGGAGATGGCAGCCCTCTATAATAGAAGTGGTGTCCTTTTGTAGTTACTTTGCTTTGTGGTTATTCATAAATGAATCATAACACCATTTGTATATTAAAGAACTACCAATATTATAGAGATGGTCTTCGAAGGGTGGCGCAGTGGTTGAAAATTTG

Coding sequence (CDS)

ATGGCGCTATGGCGAACCCTAACTCTTTCCTCATCACTGTTATCGAAATGCTCCATCCATCAAACCAAGCTTCCAATCGCTTCTCTCTTCCCATTTCCCTCTCATTTGCACGCTGCTAAACCGCTCCAATTCGCCACCCATTTCCCTAAATCCTCATCTACGGAAAGCTACCCTAAACCCTCCGAAATTCCATGGAACAAGGAGCTCTGTAACTCCGTGAGTCTCATTGGGACCGTTGGTGTGCCTGTTGGGCTCAAGCGCCTCGCCTCTGGCAAGGATTTGGCCTGGACCCGACTCGCCGTTTGGAAGTCCTCGACTGAAACCACTTGGGTAAATTTAGCATTTTGGAATGAACTGGCCCATGTTGCTTTTCAACATGTCCAGAAAGGCAACCTGATATATGTATCTGGCCGGCTGGTAGCAGATCTTGTCGAAGCTAATGATGTGAAAGGGCAAACATACTACAAGGTAGTAGTTCAGCAACTGAATTTTATAGACAGAAGCTACGCAACAGCACCCAATTATGACCAGAACTCTAATTCCGAAATGACAGGGGCTAAGCTTGGCACTAGCGGTGGTGCCGTTGAAGAATTATGGAAAGCATTCTTTGCTAATCCCGCCGTCTGGTGGGACAACAGGAATAATAAGAAGAACCCTAAATATCCAGACTTTAAGTGCAAGGACACTGGGGAAGCCTTATGGGTCGAGGACAGGTACAATCCACCTTGGGTGAAGCCCCAACTGGCAATGTTGGACATGAAAAAGGCTTCTCTTGATGAGCAGGAAGCTACAATGGCAAAACTTTATAGCTAG

Protein sequence

MALWRTLTLSSSLLSKCSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETTWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSYATAPNYDQNSNSEMTGAKLGTSGGAVEELWKAFFANPAVWWDNRNNKKNPKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMAKLYS

Homology

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BLAST of Sed0004930 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 386.0 bits (990), Expect = 2.7e-103
Identity = 198/280 (70.71%), Postives = 228/280 (81.43%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TLTLSSSLLSK    SI + +L I+S +PF S L+A K L+FAT FPK S+ E  
Sbjct: 3   MALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAMENY 62

Query: 61  -----SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETTW 120
                +YPKPSEIPW K+L NSVSLIGTVG+PV LK LA+GKD+AWTRLAVWKSSTET+W
Sbjct: 63  SSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTETSW 122

Query: 121 VNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSYA 180
           +NL FW+ELAHVA QH+QKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS +
Sbjct: 123 INLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNS 182

Query: 181 TAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFKC 240
           T P+YDQ+SNS M G KLG+      G+ +ELW+AFFANP  WWDNR NKKNPKYPDFK 
Sbjct: 183 TGPHYDQDSNSVMAGKKLGSGAVDNVGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 241 KDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
           KDTGEALWVE RYNPPWVK QLA+LDM+ +SLD+QEA MA
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMA 282

[Close]

BLAST of Sed0004930 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 6.3e-100
Identity = 193/281 (68.68%), Postives = 222/281 (79.00%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TL LSSSL SK    SI + +LPI+S FPF S+L+  K L+F   FPK S+ E  
Sbjct: 3   MALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENY 62

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPS+IPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 63  TNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 122

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W+ L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 123 WIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 182

Query: 181 ATAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFK 240
           +TAP+YDQ+SNS M G K G+      G+ +ELW+AFFANP  WWDNR NKKNPKYPDFK
Sbjct: 183 STAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 242

Query: 241 CKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
            KDTGEALWVE RYNPPWVK QLA+LDM+  SLD+QEA MA
Sbjct: 243 HKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMA 283

[Close]

BLAST of Sed0004930 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99
Identity = 196/280 (70.00%), Postives = 222/280 (79.29%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TL+LSSSLL K    SI + +  IASL    SHL AAK L+FA  FPK S+ E  
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASL----SHLDAAKRLRFARRFPKCSAMENF 62

Query: 61  -----SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETTW 120
                SY KP EIPW+KEL NSVSLIGTVG PV +K LASGKD+AWTRLAVWKSSTET+W
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 121 VNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSYA 180
           +NL FW+ELAH+AFQHVQKGN I+VSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS +
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 181 TAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFKC 240
           TAP++DQ+SNS + G KLG       G+ +ELW+AFFANP  WWDNR NKKNPKYPDFK 
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 241 KDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
           KDTGEALWVE RYNPPWVK QLA+LDM+  SLDEQEA MA
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMA 278

[Close]

BLAST of Sed0004930 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 5.4e-99
Identity = 195/287 (67.94%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           +AL +TLTLSSS  SK    SI + +L I+S FPF S+L+  K L+FAT FPK S+ E  
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPSEIPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W++L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 181 ATAPNYDQNSNSEMTGAKLGTSGGAV------EELWKAFFANPAVWWDNRNNKKNPKYPD 240
           +TAP+YDQ+SNS M G K   S GAV      +ELW+AFFANP  WWDNR NKKNPKYPD
Sbjct: 185 STAPHYDQDSNSIMAGRK--PSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPD 244

Query: 241 FKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMAKLYS 271
           FK KDTGEALWVE RYNPPWVK QLA+LDM+ +SLD+QE  M    S
Sbjct: 245 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVS 289

[Close]

BLAST of Sed0004930 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-98
Identity = 194/287 (67.60%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           +AL +TLTLSSS  SK    SI + +L I+S FPF S+L+  K L+FAT FPK S+ E  
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPSEIPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W++L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 181 ATAPNYDQNSNSEMTGAKLGTSGGAV------EELWKAFFANPAVWWDNRNNKKNPKYPD 240
           +TAP+YDQ+SNS M G K   S GAV      +ELW+AFFANP  WWDNR NKK+PKYPD
Sbjct: 185 STAPHYDQDSNSIMAGRK--PSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYPD 244

Query: 241 FKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMAKLYS 271
           FK KDTGEALWVE RYNPPWVK QLA+LDM+ +SLD+QE  M    S
Sbjct: 245 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVS 289

[Close]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 8.5e-23
Identity = 75/234 (32.05%), Postives = 114/234 (48.72%), Query Frame = 0


Query: 33  PSHLHAAKPLQFATHFPKSSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGK 92
           P  +   KPL+ A+    +++    P+P+EI +  E+ N V+LIG V  PV  +  + GK
Sbjct: 63  PEAVTPVKPLEIAS--VTATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGK 122

Query: 93  DLAWTRLAVWKSSTET-TWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKG 152
             A T ++   +S  +  W+ + F  +LA  A ++V K + I+VSG+L  D    N    
Sbjct: 123 FWAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYA 182

Query: 153 QTYYKVVVQQLNFIDRSYATAPNYDQNSNSEM---------TGAKLGTSGGAVEELWKAF 212
           Q   +V+VQ LNFI     +   +   S+SE            AK         + W   
Sbjct: 183 QANVQVLVQNLNFIQPMSPSPSPFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHL 242

Query: 213 FANPAVWWDNRNNKKN----PKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLD 253
             NP  WWD+R NK N    P++PDFK KD+  +LW+     P WV P+L  L+
Sbjct: 243 IENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-22
Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 0


Query: 43  QFATHFPKS---SSTES--------YPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASG 102
           Q ++ FPKS   S  ES        + KP        L NSVSL+G V   + +      
Sbjct: 17  QISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPD 76

Query: 103 KDLAWTRLAVWK--SSTETTWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDV 162
           +   +T L V    +   +  ++L  W+ +A     H++  + I VSGRL +    ++DV
Sbjct: 77  RFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDV 136

Query: 163 KG--QTYYKVVVQQLNFIDRSYATAPNY---DQNSNSEMTGAKLGTSGGAVEE--LWKAF 222
                  Y+V V ++N++    A  P++    Q S +  T  +        +E  LW+ F
Sbjct: 137 YSGLNLDYQVKVAEVNYV----AAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVF 196

Query: 223 FANPAVWWDNRNNKKNPKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQE 269
           F+NP  WWDNR NKKNPK PDFK KDTGEALW+     P W+  +L + D K    DE++
Sbjct: 197 FSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEK 256

[Close]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.7e-19
Identity = 64/218 (29.36%), Postives = 107/218 (49.08%), Query Frame = 0


Query: 53  STESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKS-------- 112
           S+E +P+P E+P+  ++ NS+ LIG V  PV       GK  A T ++   S        
Sbjct: 55  SSEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESD 114

Query: 113 STETTWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTY---------- 172
           S+   W+ + F  +LAH A  +++K + ++++G+++ D++++     Q +          
Sbjct: 115 SSSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGS 174

Query: 173 --YKVVVQQLNFIDRSYA---TAPNYDQN------SNSEMTGAKLGTSGGAVEELWKAFF 232
             ++V+V+ L++I+ S A     P  DQN      S S   G + GT+      LW    
Sbjct: 175 FSHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTN------LWFDLV 234

Query: 233 ANPAVWWDNR----NNKKNPKYPDFKCKDTGEALWVED 238
             P  W D R    N   NPK+PDFK KD  +ALW+ +
Sbjct: 235 DKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWLNN 266

[Close]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-18
Identity = 68/221 (30.77%), Postives = 103/221 (46.61%), Query Frame = 0


Query: 51  SSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT- 110
           ++  ES P P +I +  E+ N ++LIG V  PV     + GK  A T ++    S  +  
Sbjct: 63  ATEKESTP-PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNF 122

Query: 111 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 170
           W+ + F  +LA +A QHV+K + I+VSG+L  D    N    Q+  +V+VQ LNF+  + 
Sbjct: 123 WIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAAT 182

Query: 171 ATA-----PNYDQNS--NSEMTGAKLGTSGGAVEELWKAFFANPAVWWDNRNNKKN---- 230
           +T      P  +  S         K+          WK    NP  W D+R NK N    
Sbjct: 183 STTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVK 242

Query: 231 PKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLD 260
           P +PDFK K  G +LW+          P  A+L +++   D
Sbjct: 243 PGHPDFKMKVGGLSLWLS-------TAPDWALLKLEELKFD 275

[Close]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot
Match: P66848 (Single-stranded DNA-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=ssb PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-04
Identity = 26/103 (25.24%), Postives = 51/103 (49.51%), Query Frame = 0


Query: 71  NSVSLIGTVGVPVGLKRLASGKDLAWTRLA---VWKSST-----ETTWVNLAFWNELAHV 130
           N V LIG +G    ++ + +G+ +    +A    W          T W N+  + +LA +
Sbjct: 4   NKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEI 63

Query: 131 AFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFI 166
           A Q+++KG L+Y+ GR+ +   +  D   +T Y +V  ++  +
Sbjct: 64  AGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANEMKML 106

[Close]

BLAST of Sed0004930 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100
Identity = 193/281 (68.68%), Postives = 222/281 (79.00%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TL LSSSL SK    SI + +LPI+S FPF S+L+  K L+F   FPK S+ E  
Sbjct: 3   MALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAMENY 62

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPS+IPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 63  TNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 122

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W+ L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 123 WIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 182

Query: 181 ATAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFK 240
           +TAP+YDQ+SNS M G K G+      G+ +ELW+AFFANP  WWDNR NKKNPKYPDFK
Sbjct: 183 STAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 242

Query: 241 CKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
            KDTGEALWVE RYNPPWVK QLA+LDM+  SLD+QEA MA
Sbjct: 243 HKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMA 283

[Close]

BLAST of Sed0004930 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.9e-100
Identity = 196/280 (70.00%), Postives = 222/280 (79.29%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TL+LSSSLL K    SI + +  IASL    SHL AAK L+FA  FPK S+ E  
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASL----SHLDAAKRLRFARRFPKCSAMENF 62

Query: 61  -----SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETTW 120
                SY KP EIPW+KEL NSVSLIGTVG PV +K LASGKD+AWTRLAVWKSSTET+W
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 121 VNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSYA 180
           +NL FW+ELAH+AFQHVQKGN I+VSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS +
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 181 TAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFKC 240
           TAP++DQ+SNS + G KLG       G+ +ELW+AFFANP  WWDNR NKKNPKYPDFK 
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKH 242

Query: 241 KDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
           KDTGEALWVE RYNPPWVK QLA+LDM+  SLDEQEA MA
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMA 278

[Close]

BLAST of Sed0004930 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.6e-99
Identity = 195/287 (67.94%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           +AL +TLTLSSS  SK    SI + +L I+S FPF S+L+  K L+FAT FPK S+ E  
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPSEIPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W++L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 181 ATAPNYDQNSNSEMTGAKLGTSGGAV------EELWKAFFANPAVWWDNRNNKKNPKYPD 240
           +TAP+YDQ+SNS M G K   S GAV      +ELW+AFFANP  WWDNR NKKNPKYPD
Sbjct: 185 STAPHYDQDSNSIMAGRK--PSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPD 244

Query: 241 FKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMAKLYS 271
           FK KDTGEALWVE RYNPPWVK QLA+LDM+ +SLD+QE  M    S
Sbjct: 245 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVS 289

[Close]

BLAST of Sed0004930 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.9e-99
Identity = 194/287 (67.60%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           +AL +TLTLSSS  SK    SI + +L I+S FPF S+L+  K L+FAT FPK S+ E  
Sbjct: 5   LALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAMENY 64

Query: 61  ------SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT 120
                 +YPKPSEIPW KEL NSV+LIGTVG+PV LK L SGKD+AWTRLAVWKSSTET+
Sbjct: 65  TNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETS 124

Query: 121 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 180
           W++L FW+ELAH+A QHVQKGN IYVSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS 
Sbjct: 125 WISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 184

Query: 181 ATAPNYDQNSNSEMTGAKLGTSGGAV------EELWKAFFANPAVWWDNRNNKKNPKYPD 240
           +TAP+YDQ+SNS M G K   S GAV      +ELW+AFFANP  WWDNR NKK+PKYPD
Sbjct: 185 STAPHYDQDSNSIMAGRK--PSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYPD 244

Query: 241 FKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMAKLYS 271
           FK KDTGEALWVE RYNPPWVK QLA+LDM+ +SLD+QE  M    S
Sbjct: 245 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVS 289

[Close]

BLAST of Sed0004930 vs. ExPASy TrEMBL
Match: A0A6J1DNW7 (protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.3e-98
Identity = 195/280 (69.64%), Postives = 221/280 (78.93%), Query Frame = 0


Query: 1   MALWRTLTLSSSLLSK---CSIHQTKLPIASLFPFPSHLHAAKPLQFATHFPKSSSTE-- 60
           MAL +TL+LSSSLL K    SI + +  IASL    SHL AAK L+FA  FPK S+ E  
Sbjct: 3   MALEQTLSLSSSLLPKHTLLSIPRNRFRIASL----SHLDAAKRLRFARRFPKCSAMENF 62

Query: 61  -----SYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETTW 120
                SY KP EIPW+KEL NSVSLIGTVG PV +K LASGKD+AWTRLAVWKSSTET+W
Sbjct: 63  SNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETSW 122

Query: 121 VNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSYA 180
           +NL FW+ELAH+AFQHVQKGN I+VSGRLVADLVEA+D K QTYYKVVVQQLNFI+RS +
Sbjct: 123 INLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSIS 182

Query: 181 TAPNYDQNSNSEMTGAKLGTSG----GAVEELWKAFFANPAVWWDNRNNKKNPKYPDFKC 240
           TAP++DQ+SNS + G KLG       G+ +ELW+AFFANP  WWDNR N KNPKYPDFK 
Sbjct: 183 TAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKN-KNPKYPDFKH 242

Query: 241 KDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQEATMA 267
           KDTGEALWVE RYNPPWVK QLA+LDM+  SLDEQEA MA
Sbjct: 243 KDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMA 277

[Close]

BLAST of Sed0004930 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-24
Identity = 74/234 (31.62%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 33  PSHLHAAKPLQFATHFPKSSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGK 92
           P  +   KPL+ A+    +++    P+P+EI +  E+ N V+LIG V  PV  +  + GK
Sbjct: 63  PEAVTPVKPLEIAS--VTATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGK 122

Query: 93  DLAWTRLAVWKSSTET-TWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKG 152
             A T ++   +S  +  W+ + F  +LA  A ++V K + I+VSG+L  D    N    
Sbjct: 123 FWAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYA 182

Query: 153 QTYYKVVVQQLNFIDRSYATAPNYDQNSNSEMTGAKLGTSGGAVE---------ELWKAF 212
           Q   +V+VQ LNFI     +   +   S+SE   + +    G  +         + W   
Sbjct: 183 QANVQVLVQNLNFIQPMSPSPSPFMVMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHL 242

Query: 213 FANPAVWWDNRNNKKN----PKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLD 253
             NP  WWD+R NK N    P++PDFK KD+  +LW+     P WV P+L  L+
Sbjct: 243 IENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Sed0004930 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-24
Identity = 75/234 (32.05%), Postives = 114/234 (48.72%), Query Frame = 0


Query: 33  PSHLHAAKPLQFATHFPKSSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGK 92
           P  +   KPL+ A+    +++    P+P+EI +  E+ N V+LIG V  PV  +  + GK
Sbjct: 63  PEAVTPVKPLEIAS--VTATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGK 122

Query: 93  DLAWTRLAVWKSSTET-TWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKG 152
             A T ++   +S  +  W+ + F  +LA  A ++V K + I+VSG+L  D    N    
Sbjct: 123 FWAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYA 182

Query: 153 QTYYKVVVQQLNFIDRSYATAPNYDQNSNSEM---------TGAKLGTSGGAVEELWKAF 212
           Q   +V+VQ LNFI     +   +   S+SE            AK         + W   
Sbjct: 183 QANVQVLVQNLNFIQPMSPSPSPFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHL 242

Query: 213 FANPAVWWDNRNNKKN----PKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLD 253
             NP  WWD+R NK N    P++PDFK KD+  +LW+     P WV P+L  L+
Sbjct: 243 IENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Sed0004930 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 0


Query: 43  QFATHFPKS---SSTES--------YPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASG 102
           Q ++ FPKS   S  ES        + KP        L NSVSL+G V   + +      
Sbjct: 17  QISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPD 76

Query: 103 KDLAWTRLAVWK--SSTETTWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDV 162
           +   +T L V    +   +  ++L  W+ +A     H++  + I VSGRL +    ++DV
Sbjct: 77  RFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDV 136

Query: 163 KG--QTYYKVVVQQLNFIDRSYATAPNY---DQNSNSEMTGAKLGTSGGAVEE--LWKAF 222
                  Y+V V ++N++    A  P++    Q S +  T  +        +E  LW+ F
Sbjct: 137 YSGLNLDYQVKVAEVNYV----AAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVF 196

Query: 223 FANPAVWWDNRNNKKNPKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLDEQE 269
           F+NP  WWDNR NKKNPK PDFK KDTGEALW+     P W+  +L + D K    DE++
Sbjct: 197 FSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEK 256

[Close]

BLAST of Sed0004930 vs. TAIR 10
Match: AT1G31010.1 (organellar single-stranded DNA binding protein 4 )

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 64/218 (29.36%), Postives = 107/218 (49.08%), Query Frame = 0


Query: 53  STESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKS-------- 112
           S+E +P+P E+P+  ++ NS+ LIG V  PV       GK  A T ++   S        
Sbjct: 55  SSEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESD 114

Query: 113 STETTWVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTY---------- 172
           S+   W+ + F  +LAH A  +++K + ++++G+++ D++++     Q +          
Sbjct: 115 SSSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGS 174

Query: 173 --YKVVVQQLNFIDRSYA---TAPNYDQN------SNSEMTGAKLGTSGGAVEELWKAFF 232
             ++V+V+ L++I+ S A     P  DQN      S S   G + GT+      LW    
Sbjct: 175 FSHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTN------LWFDLV 234

Query: 233 ANPAVWWDNR----NNKKNPKYPDFKCKDTGEALWVED 238
             P  W D R    N   NPK+PDFK KD  +ALW+ +
Sbjct: 235 DKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWLNN 266

[Close]

BLAST of Sed0004930 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-19
Identity = 68/221 (30.77%), Postives = 103/221 (46.61%), Query Frame = 0


Query: 51  SSSTESYPKPSEIPWNKELCNSVSLIGTVGVPVGLKRLASGKDLAWTRLAVWKSSTETT- 110
           ++  ES P P +I +  E+ N ++LIG V  PV     + GK  A T ++    S  +  
Sbjct: 63  ATEKESTP-PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNF 122

Query: 111 WVNLAFWNELAHVAFQHVQKGNLIYVSGRLVADLVEANDVKGQTYYKVVVQQLNFIDRSY 170
           W+ + F  +LA +A QHV+K + I+VSG+L  D    N    Q+  +V+VQ LNF+  + 
Sbjct: 123 WIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAAT 182

Query: 171 ATA-----PNYDQNS--NSEMTGAKLGTSGGAVEELWKAFFANPAVWWDNRNNKKN---- 230
           +T      P  +  S         K+          WK    NP  W D+R NK N    
Sbjct: 183 STTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVK 242

Query: 231 PKYPDFKCKDTGEALWVEDRYNPPWVKPQLAMLDMKKASLD 260
           P +PDFK K  G +LW+          P  A+L +++   D
Sbjct: 243 PGHPDFKMKVGGLSLWLS-------TAPDWALLKLEELKFD 275

The following BLAST results are available for this feature:

BLAST of Sed0004930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	2.7e-103	70.71	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_004146958.1	6.3e-100	68.68	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
XP_022155802.1	1.8e-99	70.00	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]
XP_008451268.1	5.4e-99	67.94	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
KAA0059696.1	2.0e-98	67.60	protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v...	[more]

BLAST of Sed0004930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXH3	8.5e-23	32.05	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9SX99	3.2e-22	32.52	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q9FYJ2	5.7e-19	29.36	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q8GWJ4	2.8e-18	30.77	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
P66848	8.8e-04	25.24	Single-stranded DNA-binding protein OS=Neisseria meningitidis serogroup A / sero...	[more]

BLAST of Sed0004930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W2	3.1e-100	68.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A6J1DQC6	8.9e-100	70.00	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3BRV3	2.6e-99	67.94	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	9.9e-99	67.60	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A6J1DNW7	8.3e-98	69.64	protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Sed0004930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20010.2	2.1e-24	31.62	plastid transcriptionally active 9	[more]
AT4G20010.1	6.0e-24	32.05	plastid transcriptionally active 9	[more]
AT1G47720.1	2.3e-23	32.52	Primosome PriB/single-strand DNA-binding	[more]
AT1G31010.1	4.0e-20	29.36	organellar single-stranded DNA binding protein 4	[more]
AT5G44785.2	2.0e-19	30.77	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 69..187 e-value: 2.0E-16 score: 62.3
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 50..183
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 71..164 e-value: 9.3E-13 score: 48.1
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 69..166 score: 18.032337
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 73..165 e-value: 4.03512E-14 score: 63.4002
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 50..183
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 71..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004930.1	Sed0004930.1	mRNA
Sed0004930.2	Sed0004930.2	mRNA
Sed0004930.3	Sed0004930.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding