Sed0004919 (gene) Chayote v1

Overview


Name	Sed0004919
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Location	LG14: 5528711 .. 5533650 (-)
RNA-Seq Expression	Sed0004919
Synteny	Sed0004919

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCAACCCTGAGATTTAAACTGTAGAGAGAGAAACTAGAGAGAGAAAAATGTCGTGGAGATGGATGGAAGCGGCTCTTCCTCTGGGAATCATCGCCGGAATGCTCTGTATCATGGGCAATGCTCAATATCACATTCACAAAGCCGCCCATGGCCGGGTAATGATCTTTCCACTCGCTTTTGTTTGATTTCCCCCCTTTTTTCTGAGTTCTGATCGACGATTTCTTCAATTGGTTTTTGGATTTTGATTTCTGTTGTTCGAATTGTGTGCAGCCCAAGCACATCGGAAATGATCTGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTCGTTGATAATCTGTCTGCTGCTTCTCAGAGTTAATTCTCTAGATCTGCACCTCCTGGTACGTGTTTATGCGTTTTTGTATTTGTGTTTTTCGATTTTAGAGATTGTTAACTTTGGGGGTTTGTAGATTTTAGGTCAATCCTCTTTCTGGGTGGGTTGTTGATTCCATTTCTTGGACTTGGAGGGTGTTAAATTTGAAATTCAGTATGATTTTTTTTTTTTTTTGTTCCTATTTGTTGTAATGCGGAGCATTTCTCGGTTGAAGGGTAGTACACAAAGTTAGTTAGGAAAGATCGGGTTAGATGGAGGCAATAAGCTAGGGTTAACTGGGCAGAGGAGGGGAGCAAGAATATTGACTCGGGATAATAGTAGGGGAAAGTCCAGTGTTTTAAAAAGCGCAAGGCGCACCCAGGCGAGGGCTTTTTTACATAAGACGCACTATAAAAAAAACACAAAAAATATATATATGTGCGTGTATACACAATAAAAACATTTCCATAGATATAAATGAAGTTTTAACCAAGAATAATATATAAAACATGTATTACATTTTAATTATTAACCTTCATTCATGAATAGAAATGAAGTTTAACAAAGAATCTATACAAAACATTCATAAGATTCAACTATTAACCTTTCATTTTAAGCGAATATTGCCTATGTGAGTTAAAAAATTAAGTTATTTAAGGCATTGAAGTGTCTTGAATCAATTATGTTGCGCTTCGAATGACTAGTACAGGGGTCTTGCTAGCGCCCGGGGCTTCATGTTAGGCGCCAAAAGGCGCGCGCCTCGCTTTTCCCAAGCGAGGCGCTAGAGGTGCGACTTGGGCGCGTCTTTTAAAACACTGGGAAAGTCTACGGGAAGATGGAACGGTAGAGGAGGAAGTCTAAACTTTTTTTGAAACAAGGTAACCACGCCCATTCCTAGGTCAGGCACCGGAGACATCAAAGGAGTAGTGTCACAGGTGAGTCTCGAACCTGGAACCTTGGGGGGAGCATACCCTCAAAGTCCAAGTTTTCAACCACTGTGCCACCCTTTGAGGACAAGGAAGTCTTAACTTTTACTCTTCTCTTTATTCTCTCATTCTTCATCCTAGAGGCTAGATCTTTTTTTGAGGGCATGAATTAGTGTCTTACTTTGGATAATGATTATTCGGAGTTGGGTGCTTCGTTTTCTCACTAAAGAAATCAGAAAGGAAGTGCTCATTTCGATAGGAATAAGGCTTCTAGTCCAAATGGCTTTACACTGGCAGTGGTCTTTTTTCAGGATTGTTGGGTAAGTATCAAAGTGGATTTTTGTAAAGTTTTTTTTGAGTTTCACTAGAGAAAGTTTGTCTTAAGTTCCTAATTTCAAAAAAAGATTTTGAGAGGAAGGTTGGGGATTTTAGGCCAATTAGCCTAGTAACGAGTGCTTACAAGATTATTGCTAAGGTGTTGGCTAAGAAAGGCCCTTCCAATGACAATGGTATACTCTTAGGAGACTTTCATAGCCTGGGACATATTTTAGATCAACTGCTTATTTTGAGTGGTTTTGTCTCATTTGGTGTCAAATCCCTCGCCCCGTCTGGGGTTGATGCATCCTTTGTCGGAGAGGGTGACACTAGACAGTTTTGACATTCTTTCTTTGGTGATGGGATGTTCTTGGAGTGCACTAGAGAGGAGGGATGCATGTTCTTGGTGTCCTTGTCATTTCTAAGATTTATGTTGCCTCTCATTTTTTGTGCATCGTTAATCCTTCTCTTTGTCCTTCGTTGGGGAATTATGTGTCAGTCTTAGTCTGGAAGGTGCAAATTTTATAGGAGGTCAAGTTTTTTATATGGAGGGTATTACACAAAAGGTGAACACATTAGATAGAGTGGTGTGGAAGGTGTCCACTTTGGTGGCGCTCTGAAGTTGTAATCACATTCTTTAGCAGTGGGAGACAACTTCGTTGGTCTAGAATAGGGTTTTTCTGGTGTTCAATCTCTCCTTGGCCAGGAAAAGGGATTGTAGGGACTAGGGAGATGACTATCAAGTGCTATGTTCATCCTTCGTTTCGTCATTCGTGAGAATGGAAAGTTTTTGTGGCAAGTTGGGGCTTGTCCCACATTGTGGGGCCTTTGATGGGAAACAATAGAGCCTTCTGAGGGGCTGAGAGGTCCTTGGATGACGTTTGGTCCCTATTTGGATTCCTTTTTTCTCTTAGGACTTCTAATATCTGGCATGGATGGCAGATTTAAGACCCTTTTTTTTTTGCAAATGAAGTTGTTGAAAATTATCGAGTTAGGAGGAAAAAAGGTTGGATTTTGAAGCTCGACTTTGGAGCTTTTTGATTGCGTGGATTGGGACTTTTTAGAGGAAGTTGGATTTTGGAGGCATGTCATGAATGGGTTGGGATGGTTGAGATTTGGGAAATGGAAGGGAGGATGTGCATCGTAGGTAAAGAAAACTAAATTGATAATATTTTCAAAACATGGGTCTCAAAAAAAATATTTTCAAAACATAAATTCAGAAGGTATGCGAAACGATGCATATTGACTTGATGAGGCCAGCAGGAATCTTATCTATTTATTTCTACTCCATATGTGGATTGAACGGAAAGGCACTCTTTGGCCTCTCCAACCGACATGTGACGTGTGTTCTTCAAGCCGACAACTAATGTTGGTTATAATTGGTTTTCTGGATTCACTTGTTTATCCCGAAGACCTTTTGTGTGGATTTGTGTTTATATTAATATTTTATCTTTTGTCCCCAAGGGGTAGTACAGTAGTTGAAGACTTGGGTTTTGAGGGTATGTTCCCCTAAAGGTCTCAGGTTTGACACTTACCTGTGACATTACTCCTTTGATGTCTCCCGGTGTCTAGCCTAGTGATGAGCGTGGTTACCCATGTTTCGATAAAAAAAAATTATTTTTTAATTATTTTTTCCTTTTATGATTAGATTAAATATTGTTATTTCCTTTTACGATTAGGTTAAATATTAGATTCTCTCTTTTATTCTGTTTAACTCAATGTTAGAGTTCATTATTGAATAAGAATTTGAATTCTATCTTTCGATACGTTGTATACCTATGCCAGGAGAAGAAATTTGGTTATGTGGCAGTTTTACTACTCATTTTGTCCTAAAGTTCTTATAAGTTATTTTTTAGGGGAAGCAGATACTATTCATTGATGTATGAAAAATGTACAAAAAAGTCAAAGCATCTATATTAAATGATGCCAATGATAAAATAAAGTGGTCAAATCATAGTTACAAAAAGGTGGAGAACGATGAGACCAATATAATCCCAAATGAATAGCTGACCCATTAAGGTTGTCAAGATTGAGGTGTTTGTTGTTGAATATTCTATTGTTCCTTTCCATCCACCAAATCCAGAAGAAAGCATAGATTAAATTGCACCAAAGAATCTCCTTGTTGTTTTTGAAAGGATGTCCAATAAGTAAGCAATGAAGGAGAGTGACAGTGTCCTTAGGTAGAGCAATGGACCAATAAAAAATCTTCAAAATTCTACTCCAAAAGTTCTTATAAGTTTGGGCCAAGTTCCATTGATGTCTAAAGCCCAATCTAGACCCATGAGAAGTTTTAGGCATTAACTTGATCACTTAACTAGTATTTCCTCTTCTTTTATTTTATTGGTTTGAATTTCTGTACTACTGAACTGCTGGATTTATTTCTGAGACATCACATCAAGTATATGTCTCTAGGTCAAAACCCTTTTCCAGCTTATATAGAGCATTGAAACTCAAAATGTGCTATTTTGAAATTTGAACCATTTGTTAAACTCCTTGCTCACATGCGCACTCATCCACTCATAGGATTTTGTTTATTTTAGGATTTTGTCTCCGAGGTGTGCCACGGTGGTCAAAGGCTTGGGCTTGAAAAGTGTGCTCCCCTTCAAGGTCCAAAGTTCGAGACTCACCTATGATATTAATTTGTAGACACCGTCTCTTTGGGGTGGCAAATTGGTTAAAGACTTGGGCTTTGAAGATATGCTCCCTTCAAGGTCTCAGGTTCGAGACTCACCTGTGACATTACTCCTTCGATGTCTCTCAGTGTCTGTCTCAAGGATGGGCGCGGTTACCCTTGTTTCAAAAAAAAAAAATTTGTAGACACCTCATGTGTTTTCATTCTTTGATGTCTCCTGGTGACTAGTCTAAGGATGGTTACTCCGAGTATAGTGGAGCGAAACTCTGATTTCTCCGTATATAGATATAATTTAGGATTTTGTGGCATGTTAAGGGAACTCTCAGTTTTGCAACTGAAGCTTTTTGGCCTTGCTATACTTATATCATCGTTAGGATACTCTCCAACTTAAAACTGACTGTAATATAATAATCCTAGGTACTCGAGTTGTGGCCGGTGCAATCTTGATGATGGAATAAAAGTTTTTGTTGCAGAATCCTGATGTTTGTGGATGATCGCTTTCATACATTGTCAATTTTCTTCGTTCCTATCTTGATCTGAACATATGTAAAATCGATCATCAAGAATTATTTTCTATATCACATTAGATATTTTCCTGAATGTTGACTTCTAAGTTTCTGTTTTCTTGAACTACGCTTGCCTGCTCAAGCAGGTGAAACACTGTACTGAAATGATTGATGAATAATAATAGCTTGTAATTCTCATTA

mRNA sequence

GGAGCAACCCTGAGATTTAAACTGTAGAGAGAGAAACTAGAGAGAGAAAAATGTCGTGGAGATGGATGGAAGCGGCTCTTCCTCTGGGAATCATCGCCGGAATGCTCTGTATCATGGGCAATGCTCAATATCACATTCACAAAGCCGCCCATGGCCGGCCCAAGCACATCGGAAATGATCTGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTCGTTGATAATCTGTCTGCTGCTTCTCAGAGTTAATTCTCTAGATCTGCACCTCCTGGTACTCGAGTTGTGGCCGGTGCAATCTTGATGATGGAATAAAAGTTTTTGTTGCAGAATCCTGATGTTTGTGGATGATCGCTTTCATACATTGTCAATTTTCTTCGTTCCTATCTTGATCTGAACATATGTAAAATCGATCATCAAGAATTATTTTCTATATCACATTAGATATTTTCCTGAATGTTGACTTCTAAGTTTCTGTTTTCTTGAACTACGCTTGCCTGCTCAAGCAGGTGAAACACTGTACTGAAATGATTGATGAATAATAATAGCTTGTAATTCTCATTA

Coding sequence (CDS)

ATGTCGTGGAGATGGATGGAAGCGGCTCTTCCTCTGGGAATCATCGCCGGAATGCTCTGTATCATGGGCAATGCTCAATATCACATTCACAAAGCCGCCCATGGCCGGCCCAAGCACATCGGAAATGATCTGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTCGTTGATAATCTGTCTGCTGCTTCTCAGAGTTAA

Protein sequence

MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNLSAASQS

Homology

[Close]

BLAST of Sed0004919 vs. NCBI nr
Match: XP_038881013.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida])

HSP 1 Score: 134.0 bits (336), Expect = 4.6e-28
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNLSA 62
          WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+NLSA
Sbjct: 4  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASQS 67
          AS S
Sbjct: 64 ASHS 67

[Close]

BLAST of Sed0004919 vs. NCBI nr
Match: XP_022966508.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima] >XP_022966509.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima] >KAG7027518.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 6.0e-28
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          M+WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+N 
Sbjct: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60

Query: 61 SAAS 65
          SAAS
Sbjct: 61 SAAS 64

[Close]

BLAST of Sed0004919 vs. NCBI nr
Match: XP_022950918.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_022950920.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_023543068.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023543069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+N+
Sbjct: 1  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENV 60

Query: 61 SAASQS 67
          SA S S
Sbjct: 61 SAGSHS 66

[Close]

BLAST of Sed0004919 vs. NCBI nr
Match: KAG7033699.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1   MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
           M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+N+
Sbjct: 36  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENV 95

Query: 61  SAASQS 67
           SA S S
Sbjct: 96  SAGSHS 101

[Close]

BLAST of Sed0004919 vs. NCBI nr
Match: XP_004142669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >XP_031740619.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >KGN54471.1 hypothetical protein Csa_012404 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 6.6e-27
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNLSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKLV+NLSA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASQS 67
          AS S
Sbjct: 64 ASHS 67

[Close]

BLAST of Sed0004919 vs. ExPASy Swiss-Prot
Match: Q9C9Z5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At3g08610 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-22
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          MS  W+EA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+V+  
Sbjct: 1  MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA 60

Query: 61 SAAS 65
          +A S
Sbjct: 61 AAPS 64

[Close]

BLAST of Sed0004919 vs. ExPASy TrEMBL
Match: A0A6J1HU02 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111466140 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          M+WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+N 
Sbjct: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60

Query: 61 SAAS 65
          SAAS
Sbjct: 61 SAAS 64

[Close]

BLAST of Sed0004919 vs. ExPASy TrEMBL
Match: A0A6J1GH44 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111453870 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.5e-28
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGND+WDVAMERRDKKLV+N+
Sbjct: 1  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENV 60

Query: 61 SAASQS 67
          SA S S
Sbjct: 61 SAGSHS 66

[Close]

BLAST of Sed0004919 vs. ExPASy TrEMBL
Match: A0A0A0L2Y7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_4G337280 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNLSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKLV+NLSA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASQS 67
          AS S
Sbjct: 64 ASHS 67

[Close]

BLAST of Sed0004919 vs. ExPASy TrEMBL
Match: B9T0P0 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Ricinus communis OX=3988 GN=RCOM_0126310 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.5e-27
Identity = 57/64 (89.06%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          MSWRW+EAALPLGIIAGMLC+MGNAQY+IH+AAHGRPKHIGND+WDVAMERRDKKLV+NL
Sbjct: 1  MSWRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENL 60

Query: 61 SAAS 65
          SA S
Sbjct: 61 SAPS 64

[Close]

BLAST of Sed0004919 vs. ExPASy TrEMBL
Match: A0A1S3CIY2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501486 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.4e-27
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNLSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKLV+NLSA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASQS 67
           S S
Sbjct: 64 TSHS 67

[Close]

BLAST of Sed0004919 vs. TAIR 10
Match: AT3G08610.1 (unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-23
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 1  MSWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDLWDVAMERRDKKLVDNL 60
          MS  W+EA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+V+  
Sbjct: 1  MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA 60

Query: 61 SAAS 65
          +A S
Sbjct: 61 AAPS 64

The following BLAST results are available for this feature:

BLAST of Sed0004919 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881013.1	4.6e-28	95.31	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida]	[more]
XP_022966508.1	6.0e-28	93.75	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima] ...	[more]
XP_022950918.1	1.7e-27	89.39	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata...	[more]
KAG7033699.1	1.7e-27	89.39	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita...	[more]
XP_004142669.1	6.6e-27	90.63	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >...	[more]

BLAST of Sed0004919 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9Z5	2.3e-22	75.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thal...	[more]

BLAST of Sed0004919 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HU02	2.9e-28	93.75	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita maxima...	[more]
A0A6J1GH44	8.5e-28	89.39	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita moscha...	[more]
A0A0A0L2Y7	3.2e-27	90.63	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis sativus ...	[more]
B9T0P0	5.5e-27	89.06	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Ricinus communis...	[more]
A0A1S3CIY2	9.4e-27	89.06	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=...	[more]

BLAST of Sed0004919 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08610.1	1.6e-23	75.00	unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017384	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1	PFAM	PF15879	MWFE	coord: 5..56 e-value: 9.8E-11 score: 41.7
IPR017384	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1	PANTHER	PTHR17098	NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT	coord: 1..64
None	No IPR available	PANTHER	PTHR17098:SF3	BNAC05G43940D PROTEIN	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004919.1	Sed0004919.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I