Sed0004918 (gene) Chayote v1

Overview


Name	Sed0004918
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	LG03: 3711266 .. 3716442 (-)
RNA-Seq Expression	Sed0004918
Synteny	Sed0004918

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGAACTTGGAAATGCGGCTGCTGAAAGGACTCTGCCTCCGACTGAACAGGTATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGGTTGTTGTATTTATTATGTAATGAGCTTCTTATGCAACCCTTAGATATAGAGAACTTCAAGAGCTGAATGAAAATTTTGTTAGATGAATGATCACATTTAAGGCATGATTTTTCTGGATTTGTTTTCATATTTTTTTACTACAACTTTGGGATGTAGGCCACCTCATGTGCTTCTTGACTATTTTCTTTGTACTCGCTTGCAGCTCTATACCATTTGACTTGAAAAACTTGTTGGGTATTTTATATTTTATGTTGCTGGATACCATTCAAGGCATCTCGTAGACAAGGAAACTCGCATATGTAATGTGTTTTTAATAGAGAAGGACTAGGAGACAACTATTCAAATTGAAGTTATGATCTTAAAGGCATCGAGTATTCAAATTGCCCATTTGACCACTGGACCAGCCTCACTTAATTTTCCATCATCCATTGGTTTTTTTTTTTTAATAAAAGTTTTTTCCCTTGCTTAGAAGTGTTAGTGCCTTTTCCCTCTTTTTAATAATTAAATTCCAAATGCGGGGTGAGAATCCTTCAAAGGAGTTTTCCAAGGTGCCTTTGAAGTCGCTTCTTTTTGTTATCATTTTGTAAGTATGGTGGCTTAGACTTGTTCTTGTTCATGAATGGATTACCATGATTCTGAAAGTTATCGATGTGAAGCACTCTAATACTAGCTCTCTTCTTATTATAAACAATACTAGTTTTTTTTTATTCAAATGTATATCTACCTTTTATCTTGAGTGACGAAAAATTTCAAATGAGTTCGTGTTTCGTCTTCAACCCATTATTGTTTTCATCTCAACATGCAACATCTTATTGTTATTTTGTTGCTTGATTAGAAGAAGGGTAGATTATGCCATCAACTCCAGGAACAACTTAGTTATAGGAGTTTATGTTCTTTGAAGTGTGTTGAATTGGAGAAGCAGAATGTGAATTGTAAGTTGCTGAATATCTACTTTATTTGTTATTGCTGAAAATTGTATGCCATTTGCATATTTCTGTGCAGGAGGTATCCGACGAGATAAATGTGAAAATTACTAAGTATCTACGAGGAGAAGGTGCTAATCTAGAGGTATAGAAAGGGTTCTATGTTACTACACTTTTTTATTCTTATTTTTGTTTCCCTATTTAATATTTACTTTAAATAACTGGTGCTAAACATTTCTTTGCAGGTTCTGAAAGATAAAAAATTGAAGGGTCAACTTGCTGCTAGAGAAGATTTATATGGAAAAGCTGCTAAAGCTGCTGCGAAGGTCGAGAAGGTGAATTCTCAAACTCCAAAGCATTTGATATTATATTGTAACAATGCACAAAATATCTCCCCATTTTTCTATATAAGAAAGAGAAACAGATACTTTATAAGGAGTGTAAAGGAAATACAAAAAAGGATAAACAATCCACCCTGTATGCTAAGGGCATTTACAAAATGAAGCTCCCACTAGCACAAGTACAAGAAGGCTCTAAAATTTCTAAAAGAAAGGGTTTAGACTATAGAATTTCTGGTTTCTTTACAATTTTTTGGTGAAAAAGATGCTATGACATAGTTAATGTGGGTCTATTTAATGAGCTGAAAGACTTTATTTAATGATACAAGTTCAACTAGGCCTTGCCTTTCTCTCTTTCAATTCGAACTCTTTAGCATTGTACATATATTTCTTCACTTAATTTTTAATGTTTTATTTTCATTTAGTGGCTTATGCCACTTGGGAGCAGCTTTTTGGAGGTTGATGAATTGGAGAAGACGTGGAGAGTCAAACAGGAAACTATTTCCCACGAAGTAGATATCTTAAGTAGAAGGAATCAGCATGATATTATTTTACCAGGTTTCTTTTATTCATGCATTCTATTGCATATTTCAATGATTCCATTTCCCTTACTATGAAGTTTGTATTACTGTTCCTTTTTACTTGTGTTTTTTTCTTCCCATCATTACCCTTTGACTTCTCCTTGCCTAGCTGACATCTTTATGCTCTGTGACTTTGTAATTTTCTGCTGATGTTTTGTATTAAACAATTTACTTTTGATGACATGTAGAATTCTTGTCAACCATTCTGGGTTTGTGTGACCTAGTGGTCAAAAGAACCTTGGTGAACAAAAAGTTTTGTTCAATTCATGGTGACCACCAACTTAGGAATTAATTTCCTATGAGTTTCCTTAAGAACCAAATGTTGTAGGGTAAACGGTTTGTCTCAAGAAAATAGTTGAGGTGTGCCGCGTGTAAGCTGGCCCTGACACTTAGAGATATAAAAAAAAATGTGTAGAATTTTTGTGATTTACTGGACATGAGGTTTTTAAACTCTTTAAGATGTACTCTCGTTTGAATTTTTTTTACGGGACTTCTATGCTTTCTTGTACATGCTGTCATTTTATGTGGTTGAAATGACCACAAACGAGATTCAATTCACAAATCTTATCACTTTTGTACTCATTTAGTTTATGCTTGGCTTTCTTCTCTCTCTCTCCCCTTTCTGATTCCATTGATTGTATGAAATTAGTTTCTCCTTAAAAAATAATTTTTCATTCGAAGTGTTGTTCATAGTTTGGTAAATTTTAGTACTGATGTTATTCTTCAATTCATTTGTGTAGCTCTTGGACCGTATTCCCTTGACTATACTTCAAACGGTAGATATATGGCTATTGCTGGACGTAAGGGCCACCTGGCCCTTGTAGACATGAAGGATCTTAATTTAATTAAAGAATTTCAGGTATATAATGGTTATCCCTATAATATCAACTTGGTTTGGTATGAATTTATGTTTTCGATAAAAAGATTTTTCTCAAAGGCACAATTGTTATGGACGGATACATTTTTGTTGTAAATTGTAATAGTACTTTTATCATTATATTCAGATTAAAATATTGTTGTGGATTTGAAAGTATTATCATTTCTTTGGGAATTCAGCAATTTAAGCAACTCAGCCAGAATGATGAGGATATTGTAGTTATATTAGAAATTAGAATTATAGTAATTAGAAACAATTAGATGGAGATGTGTTATGATTAATAACATTTTAGGACTATGCTATATTTAAATGTAGGCTGATCTGGCTGCACATCAAACAATGTTCTCTAAATCAGTGGGATGAAAACATGGAATATGGTAGACGGCATGCCTTACTTGAAGCAGATATTTTCTATAGGTTATACTACTGTGCCCTTTGAGTCCTGTGGAATATGGTAGATGGCACGACTACTTGAAGCCATTCGTTGAATCTCCCTTTCGGTGTTTGTCTTTCCTATAAAAACAATGTATCACTATGACATACAATACATGTACAGGAAGAGCATTGAGTTTTCTCCAAAGGGAGGCCGAAATTGATTACCCAAGAAACTTCTCTAATTGTGGCAAAAAAAAAAGAAAAAAAAGAAACATGGAATGACCATAGAAGTTTTTAGTTTCTGTGTTCTTCTCATGACAGATTTTCTCAAAGAAGGCTTAATTTATTGTGTACTTTAATACTTGTTTGTACTAATCAAAGTTAATCAAGAAAATGAGTTTCATGTACTTCACAGTCAATGCTCACAGTGAACTGTTTTTCAGGTTAAGGAAACTGTGCGTGATGTGGTCTTCTTGCACAATGACTGTTCTTTGCTGTTGCACAAAAAAAGTGCGCTCGTTTCTTTCTCTTGATTGTTGATTATTTCATATTATGATTTTCTGGACATGAATGGCCTTCTTATTTTTATAAATTTGGATTCCTAAATGGAGAGTACTTCTAATTGAACATTTTGTACTAGAAAAATATAATTGAGCATTTTGAATTTTAACAGGTATCCTTATATTTATAATCGGGATGGTACAGAGCTACATTGCCTCAAGGTTGGTATATACTACTAATTGAGTAATCTTTACTGCTGTATTTCTCCCATTTCTCATGCTGGCAGCTTTACCCAAATGCATTGGAACTGTTCACAATTTGGTCTGAACTTATGAATGAATCTGAGTTCTTATTGGGTTTCATTAAGATCATGTTTGTTTCACTTAATAGGAGCATGGATCAGTCTTGAGGCTTCAATTTCTCAAAAACCACTTCCTCTTGGCATCCATAAACAAGTCAGGACAGCTACATTTTCAAGATGTAACAACAGGTAGCATGGCCGGTGTCTTCCGCACTGGTTTAGGCCGTACGGATGTGATGCAGGCAAATCCATTCAATGGGGTTATAGCAACTGGTCATTCAGGTGGTTCAGTTGCCATGTGGAAGCCAACAAGCACTGCTCCTCTCGTGAAGATGCTTTGTCATCAAGGGCCCGTGTCGTCGTTAGCATTCCACCCGAATGGCCACCTCATGGCCACCTCTGGTTCCGAGAGGAAAATTAAGATCTGGGACTTGAGGAAATTTGAGGTTCTTCAGACTCTTCCAGGACATGCTAAAACCTTAAATTTCAGTCAGAAAGGGCTACTTGCTTATGGAACTGGGTCATGTGTACAGGTTCTGAGTAATGTTTCTGGAGCTCAGAAATACACCAGATATATGACTCACTCAATTGAGAAAGGTTACCAAATAGGAAAGACATTATTTAGACCATATGAAGATGTTTTAGGCATTGGTCACTCTATGGGTTGGTCTAGCATCCTCATTCCAGGATCTGGTGAACCCAACTTTGATTCTTGGGTAGCGAACCCATTCGAGACATCAAAACAGCGGAGAGAAAAGGAGGTCCGGTCTCTTCTCGACAAGCTTCCTCCTGAGACAATTTCACTGAACCCCTCGAAACTTGGTACCGTTAGGCCAGTAGCAAAGAAAGAAAAAAAGACTAAGAAGGAAAGAGAAGCTGAGGAAGAGGCTGCAGTTGATGCTGCAAAGAACATCACCATGAAGAAGAAAACCAAGGGAAGGAATAAACCAACCAAGAAGGAAAAGAAGAAACGTGAAATTGTTGAGAAGGCCAAAAAACCTTTTCTTCATGATCAGATCAGAGAAGAAGAGTTGTCTCGGAAGAGGCCGAGGTCGAGCGAGGAAGTTGAACTTCCCAAGTCCTTGCAGAGGTTTGCTCGTAAGAAAACTGCGACGTGA

mRNA sequence

ATGGAGGAGGAACTTGGAAATGCGGCTGCTGAAAGGACTCTGCCTCCGACTGAACAGGAGGTATCCGACGAGATAAATGTGAAAATTACTAAGTATCTACGAGGAGAAGGTGCTAATCTAGAGGTTCTGAAAGATAAAAAATTGAAGGGTCAACTTGCTGCTAGAGAAGATTTATATGGAAAAGCTGCTAAAGCTGCTGCGAAGGTCGAGAAGTGGCTTATGCCACTTGGGAGCAGCTTTTTGGAGGTTGATGAATTGGAGAAGACGTGGAGAGTCAAACAGGAAACTATTTCCCACGAAGTAGATATCTTAAGTAGAAGGAATCAGCATGATATTATTTTACCAGCTCTTGGACCGTATTCCCTTGACTATACTTCAAACGGTAGATATATGGCTATTGCTGGACGTAAGGGCCACCTGGCCCTTGTAGACATGAAGGATCTTAATTTAATTAAAGAATTTCAGGTTAAGGAAACTGTGCGTGATGTGGTCTTCTTGCACAATGACTGTTCTTTGCTGTATCCTTATATTTATAATCGGGATGGTACAGAGCTACATTGCCTCAAGGAGCATGGATCAGTCTTGAGGCTTCAATTTCTCAAAAACCACTTCCTCTTGGCATCCATAAACAAGTCAGGACAGCTACATTTTCAAGATGTAACAACAGGTAGCATGGCCGGTGTCTTCCGCACTGGTTTAGGCCGTACGGATGTGATGCAGGCAAATCCATTCAATGGGGTTATAGCAACTGGTCATTCAGGTGGTTCAGTTGCCATGTGGAAGCCAACAAGCACTGCTCCTCTCGTGAAGATGCTTTGTCATCAAGGGCCCGTGTCGTCGTTAGCATTCCACCCGAATGGCCACCTCATGGCCACCTCTGGTTCCGAGAGGAAAATTAAGATCTGGGACTTGAGGAAATTTGAGGTTCTTCAGACTCTTCCAGGACATGCTAAAACCTTAAATTTCAGTCAGAAAGGGCTACTTGCTTATGGAACTGGGTCATGTGTACAGGTTCTGAGTAATGTTTCTGGAGCTCAGAAATACACCAGATATATGACTCACTCAATTGAGAAAGGTTACCAAATAGGAAAGACATTATTTAGACCATATGAAGATGTTTTAGGCATTGGTCACTCTATGGGTTGGTCTAGCATCCTCATTCCAGGATCTGGTGAACCCAACTTTGATTCTTGGGTAGCGAACCCATTCGAGACATCAAAACAGCGGAGAGAAAAGGAGGTCCGGTCTCTTCTCGACAAGCTTCCTCCTGAGACAATTTCACTGAACCCCTCGAAACTTGGTACCGTTAGGCCAGTAGCAAAGAAAGAAAAAAAGACTAAGAAGGAAAGAGAAGCTGAGGAAGAGGCTGCAGTTGATGCTGCAAAGAACATCACCATGAAGAAGAAAACCAAGGGAAGGAATAAACCAACCAAGAAGGAAAAGAAGAAACGTGAAATTGTTGAGAAGGCCAAAAAACCTTTTCTTCATGATCAGATCAGAGAAGAAGAGTTGTCTCGGAAGAGGCCGAGGTCGAGCGAGGAAGTTGAACTTCCCAAGTCCTTGCAGAGGTTTGCTCGTAAGAAAACTGCGACGTGA

Coding sequence (CDS)

ATGGAGGAGGAACTTGGAAATGCGGCTGCTGAAAGGACTCTGCCTCCGACTGAACAGGAGGTATCCGACGAGATAAATGTGAAAATTACTAAGTATCTACGAGGAGAAGGTGCTAATCTAGAGGTTCTGAAAGATAAAAAATTGAAGGGTCAACTTGCTGCTAGAGAAGATTTATATGGAAAAGCTGCTAAAGCTGCTGCGAAGGTCGAGAAGTGGCTTATGCCACTTGGGAGCAGCTTTTTGGAGGTTGATGAATTGGAGAAGACGTGGAGAGTCAAACAGGAAACTATTTCCCACGAAGTAGATATCTTAAGTAGAAGGAATCAGCATGATATTATTTTACCAGCTCTTGGACCGTATTCCCTTGACTATACTTCAAACGGTAGATATATGGCTATTGCTGGACGTAAGGGCCACCTGGCCCTTGTAGACATGAAGGATCTTAATTTAATTAAAGAATTTCAGGTTAAGGAAACTGTGCGTGATGTGGTCTTCTTGCACAATGACTGTTCTTTGCTGTATCCTTATATTTATAATCGGGATGGTACAGAGCTACATTGCCTCAAGGAGCATGGATCAGTCTTGAGGCTTCAATTTCTCAAAAACCACTTCCTCTTGGCATCCATAAACAAGTCAGGACAGCTACATTTTCAAGATGTAACAACAGGTAGCATGGCCGGTGTCTTCCGCACTGGTTTAGGCCGTACGGATGTGATGCAGGCAAATCCATTCAATGGGGTTATAGCAACTGGTCATTCAGGTGGTTCAGTTGCCATGTGGAAGCCAACAAGCACTGCTCCTCTCGTGAAGATGCTTTGTCATCAAGGGCCCGTGTCGTCGTTAGCATTCCACCCGAATGGCCACCTCATGGCCACCTCTGGTTCCGAGAGGAAAATTAAGATCTGGGACTTGAGGAAATTTGAGGTTCTTCAGACTCTTCCAGGACATGCTAAAACCTTAAATTTCAGTCAGAAAGGGCTACTTGCTTATGGAACTGGGTCATGTGTACAGGTTCTGAGTAATGTTTCTGGAGCTCAGAAATACACCAGATATATGACTCACTCAATTGAGAAAGGTTACCAAATAGGAAAGACATTATTTAGACCATATGAAGATGTTTTAGGCATTGGTCACTCTATGGGTTGGTCTAGCATCCTCATTCCAGGATCTGGTGAACCCAACTTTGATTCTTGGGTAGCGAACCCATTCGAGACATCAAAACAGCGGAGAGAAAAGGAGGTCCGGTCTCTTCTCGACAAGCTTCCTCCTGAGACAATTTCACTGAACCCCTCGAAACTTGGTACCGTTAGGCCAGTAGCAAAGAAAGAAAAAAAGACTAAGAAGGAAAGAGAAGCTGAGGAAGAGGCTGCAGTTGATGCTGCAAAGAACATCACCATGAAGAAGAAAACCAAGGGAAGGAATAAACCAACCAAGAAGGAAAAGAAGAAACGTGAAATTGTTGAGAAGGCCAAAAAACCTTTTCTTCATGATCAGATCAGAGAAGAAGAGTTGTCTCGGAAGAGGCCGAGGTCGAGCGAGGAAGTTGAACTTCCCAAGTCCTTGCAGAGGTTTGCTCGTAAGAAAACTGCGACGTGA

Protein sequence

MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYGKAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPYSLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNDCSLLYPYIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGSERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHSIEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNKPTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT

Homology

[Close]

BLAST of Sed0004918 vs. NCBI nr
Match: XP_008456565.1 (PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Cucumis melo] >KAA0057125.1 putative U3 small nucleolar RNA-associated protein 7 [Cucumis melo var. makuwa] >TYJ97106.1 putative U3 small nucleolar RNA-associated protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 915.6 bits (2365), Expect = 2.0e-262
Identity = 463/536 (86.38%), Postives = 495/536 (92.35%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           ME+ELGN  AER LPPTEQE+S+EI+VK+ KY+RGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEKELGNVVAERILPPTEQEISNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           S+DYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNR+GTELHCLKEHGSVLRLQFLKNHFLL SINK GQLH+QDVTTGSM G FRTGLGR
Sbjct: 181 YIYNREGTELHCLKEHGSVLRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSVAMWKPTS+APLVKMLCH GPVS+LAFHPNGHLMATSG+
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGA 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGS VQVL ++SGAQ YTRYM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQVLGDLSGAQSYTRYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MAKGYQIGKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GT+  V KKEKKTKKER+AEEEAAVDAAK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTLVAVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKK EI+EKAK+PFLH+QI+EEELSRKR R SEEVELPKSLQRFA KKTAT
Sbjct: 481 PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKRSRLSEEVELPKSLQRFAHKKTAT 536

[Close]

BLAST of Sed0004918 vs. NCBI nr
Match: XP_038886607.1 (probable U3 small nucleolar RNA-associated protein 7 [Benincasa hispida])

HSP 1 Score: 915.6 bits (2365), Expect = 2.0e-262
Identity = 465/536 (86.75%), Postives = 495/536 (92.35%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           ME+ELGNA AER LPPTEQEVS+EI+VK+ KYLRGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEKELGNAVAERILPPTEQEVSNEIDVKVQKYLRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILS+RNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIKQETISHEVDILSKRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNR GTELHCLKEHGSVLRLQFLKNHFLLASINK GQLH+QDVTTGSM G FRTGLGR
Sbjct: 181 YIYNRVGTELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSVAMWKPTS+APLVKMLCHQGPVS+LAFHPNG+LMATSGS
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHQGPVSALAFHPNGYLMATSGS 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGS VQ+L ++SG Q YTRYM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQILGDLSGTQNYTRYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKILFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GTV  V KKEKKTK ER+AEEEAA+DAAK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTVMAVKKKEKKTKMERDAEEEAAIDAAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKK EI+EKAK+PFLH+QI+EEELSRKR R SEEVELPKSLQRFARKKT T
Sbjct: 481 PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKRSRLSEEVELPKSLQRFARKKTVT 536

[Close]

BLAST of Sed0004918 vs. NCBI nr
Match: XP_022134200.1 (probable U3 small nucleolar RNA-associated protein 7 [Momordica charantia] >XP_022134201.1 probable U3 small nucleolar RNA-associated protein 7 [Momordica charantia])

HSP 1 Score: 911.8 bits (2355), Expect = 2.8e-261
Identity = 462/538 (85.87%), Postives = 495/538 (92.01%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           MEEE GNA AER LPPTEQEVS E++V+I KYLRGEGANLEVLKDKKLKGQL+ REDLYG
Sbjct: 1   MEEEQGNAVAERVLPPTEQEVSSEMDVRIKKYLRGEGANLEVLKDKKLKGQLSVREDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYTSNGRYM IAGRKGHLA+VDMK+LNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTSNGRYMTIAGRKGHLAIVDMKNLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLAS NK GQLH+QDVTTGSM GVFRTGLGR
Sbjct: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASFNKFGQLHYQDVTTGSMVGVFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGG+VAMWKPTS+APLVKMLCH+ PVS+LAFHPNGHLMATSGS
Sbjct: 241 TDVMQVNPFNGVIATGHSGGTVAMWKPTSSAPLVKMLCHRTPVSALAFHPNGHLMATSGS 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGSCVQ+L + SG Q Y++YM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSCVQILGDPSGTQNYSKYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKLLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GTV  V KKEKK+KKEREAEEE+AVD AK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTVMSVKKKEKKSKKEREAEEESAVDIAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIR--EEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKKREI+EKAK+PFLH+QI+  EEELSRKRP+ SEEVELPKSLQRFARKKT T
Sbjct: 481 PTKREKKKREIIEKAKRPFLHEQIKEEEEELSRKRPKLSEEVELPKSLQRFARKKTET 538

[Close]

BLAST of Sed0004918 vs. NCBI nr
Match: XP_022939750.1 (probable U3 small nucleolar RNA-associated protein 7 [Cucurbita moschata])

HSP 1 Score: 910.2 bits (2351), Expect = 8.2e-261
Identity = 463/537 (86.22%), Postives = 497/537 (92.55%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           MEEELG   AER LPPTEQEV +E +VKI KYLRGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEEELGKPVAERILPPTEQEVLNEEDVKIKKYLRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR++QETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIRQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYT NGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTLNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINK GQLH+QDVTTGSMAGVFRTGLGR
Sbjct: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTTGSMAGVFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSV MWKPTS++PLVKMLCHQGPVS+LAFHPNGHLMATSG 
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVVMWKPTSSSPLVKMLCHQGPVSALAFHPNGHLMATSGC 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLA GTGS VQ+L +++G+Q YTRYM+HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLACGTGSYVQILGDLAGSQNYTRYMSHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSIL+PGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKILFRPYEDVLGIGHSMGWSSILVPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETI+LNPSK+GTV  V KKEKKTKKEREAEEE+A+DAAKNITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETIALNPSKIGTVMAVKKKEKKTKKEREAEEESAIDAAKNITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIR-EEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKKREI++K+KKPFL +QI+ EEELSRKRPRSSEEVELPKSLQRFARKKTAT
Sbjct: 481 PTKREKKKREIIDKSKKPFLQEQIKEEEELSRKRPRSSEEVELPKSLQRFARKKTAT 537

[Close]

BLAST of Sed0004918 vs. NCBI nr
Match: KAG6578785.1 (hypothetical protein SDJN03_23233, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016316.1 utp7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 910.2 bits (2351), Expect = 8.2e-261
Identity = 464/537 (86.41%), Postives = 497/537 (92.55%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           MEEELG   AER LPPTEQEV +E +VKI KYLRGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEEELGKPVAERILPPTEQEVLNEEDVKIKKYLRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR++QETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIRQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYT NGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTLNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINK GQLH+QDVTTGSMAGVFRTGLGR
Sbjct: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTTGSMAGVFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSV MWKPTS++PLVKMLCHQGPVS+LAFHPNGHLMATSG 
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVVMWKPTSSSPLVKMLCHQGPVSALAFHPNGHLMATSGC 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLA GTGS VQ+L +++G+Q YTRYM+HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLACGTGSHVQILGDLAGSQNYTRYMSHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKILFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETI+LNPSK+GTV  V KKEKKTKKEREAEEE+A+DAAKNITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETIALNPSKIGTVMAVKKKEKKTKKEREAEEESAIDAAKNITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIR-EEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKKREI++K+KKPFL +QI+ EEELSRKRPRSSEEVELPKSLQRFARKKTAT
Sbjct: 481 PTKREKKKREIIDKSKKPFLQEQIKEEEELSRKRPRSSEEVELPKSLQRFARKKTAT 537

[Close]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot
Match: Q9P4X3 (Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp7 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 5.3e-85
Identity = 190/520 (36.54%), Postives = 284/520 (54.62%), Query Frame = 0


Query: 23  DEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYGKAAKAAAKVEKWLMPLGSSFLE 82
           +++N    KY RG   N + +KDKKL+  +   E+       + AK E  L       LE
Sbjct: 9   EDVNASTKKYSRGRKLNPKKIKDKKLRSNIQKIEERIENVESSLAKTE-ILHEDNPGLLE 68

Query: 83  VDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPYSLDYTSNGRYMAIAGRKGHLAL 142
            + LE+T++ +Q+ ++  V + +      + L   G YS DYT +GR + + GRKGH++ 
Sbjct: 69  AEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRKGHISA 128

Query: 143 VDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYPYIYNRDGTELHCLKEHGSVLRL 202
            D +   L+ E  ++ETVRDV + HN          Y Y+Y+  GTE+HCLK H  V  L
Sbjct: 129 FDWRTGKLLTELHLRETVRDVKWFHNHQYFAVAQKKYVYVYDNMGTEIHCLKRHIEVNAL 188

Query: 203 QFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGRTDVMQANPFNGVIATGHSGGSV 262
            FL  H LL SI  +G L +QDV+TG +    RTG+G + V+  NP N V   GH+ G V
Sbjct: 189 DFLPYHLLLTSIGNAGYLKYQDVSTGQLVAEHRTGMGASHVLHQNPHNAVEHVGHANGQV 248

Query: 263 AMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGSERKIKIWDLRKFEVLQT--LPG 322
            +W P+ST PLVKML H+GPV  LA + +G  M T+G++  +K+WDLR ++ L +   P 
Sbjct: 249 TLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPT 308

Query: 323 HAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHSIEKGYQIGKTLFRPYEDVLG 382
            A+ L  S +GLLA G G    +  +    ++   YM H +     +    + PYED+LG
Sbjct: 309 PAQRLTLSDRGLLAVGWGPHATIWKDALRTKQNFPYMNHLLPSS-SVVDLHYCPYEDILG 368

Query: 383 IGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETISLNPSKLGT 442
           IGH+ G+ SI++PGSGEPN+DS+  +PF + KQR+E EVR LL+KL PE ISLN   +G 
Sbjct: 369 IGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISLNADFIGN 428

Query: 443 VRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNKPTKK--EKKKREIVEK---- 502
           V   A   +K + E E   E      +    K K +G+N   ++   K  R +V++    
Sbjct: 429 VDRAAPSLRKAEAEEEKPPE------EKWVPKAKARGKNSALRRYLRKHARNVVDQRRLK 488

Query: 503 -AKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKK 529
             K   +  ++R + + R++    E  +   +L RF  KK
Sbjct: 489 VEKSLEIEKKMRAQRVRREQKLPEEREKWGYALSRFVSKK 520

[Close]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot
Match: P40055 (U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP7 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-77
Identity = 181/494 (36.64%), Postives = 282/494 (57.09%), Query Frame = 0


Query: 44  KDKKLKGQLAAREDLYGKAAKAAAKVEKWLMPLGSSFLEVD-ELEKTWRVKQETISHEVD 103
           KDKKL+  L   ++ Y KA  +AA  + +L+P  + +LE + ELEKT++V+Q  I   VD
Sbjct: 38  KDKKLRAGLKKIDEQYKKAVSSAAATD-YLLPESNGYLEPENELEKTFKVQQSEIKSSVD 97

Query: 104 ILSRRNQHDIILPALGPYSLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRD 163
           + +     D+ L   GPY + Y  NG ++ I GRKGH+A +D +   L  E  + ET   
Sbjct: 98  VSTANKALDLSLKEFGPYHIKYAKNGTHLLITGRKGHVASMDWRKGQLRAELFLNETCHS 157

Query: 164 VVFLHND-----CSLLYPYIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHF 223
             +L N+         Y +IY+ +GTELH LK+H     L FL  H+LL +  ++G L +
Sbjct: 158 ATYLQNEQYFAVAQKKYTFIYDHEGTELHRLKQHIEARHLDFLPYHYLLVTAGETGWLKY 217

Query: 224 QDVTTGSMAGVFRTGLGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGP 283
            DV+TG +    RT  G T  M  NP+N V+  GHS G+V++W P+   PLVK+L  +GP
Sbjct: 218 HDVSTGQLVSELRTKAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGP 277

Query: 284 VSSLAFHPNGHLMATSGSERKIKIWDLRKFEVL---QTLPGHAKTLNFSQKGLLAYGTGS 343
           V+S+A   +G+ MAT+G++R +KIWD+R F+ L   ++LP     ++ S  GLLA   G 
Sbjct: 278 VNSIAIDRSGYYMATTGADRSMKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRGP 337

Query: 344 CVQVLSN---VSGAQK------------YTRYMTHSIEKGYQIGKTLFRPYEDVLGIGHS 403
            V +  +   +SG  K             T YM+H +  G ++    F P+ED+LG+GH 
Sbjct: 338 HVTLWKDALKLSGDSKPCFGSMGGNPHRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQ 397

Query: 404 MGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETISLNPSKLGTVRPV 463
            G +++++PG+GE N+D+   NPFET KQR+E+EVR+LL+KLP +TI+L+P+ +G+V   
Sbjct: 398 TGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSVDKR 457

Query: 464 AKKEKKTKKEREAEEEAAVDAAKNIT----MKKKTKGRNKPTKK-EKKKREIVEKAKKPF 509
           +   +   K+       A + AK  +    +K   KG+N   +   +KK + V   +K  
Sbjct: 458 SSTIRLNAKDLAQTTMDANNKAKTNSDIPDVKPDVKGKNSGLRSFLRKKTQNVIDERKLR 517

[Close]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot
Match: Q9Z0H1 (WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.0e-77
Identity = 185/492 (37.60%), Postives = 277/492 (56.30%), Query Frame = 0


Query: 47  KLKGQLAAREDLYGKAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSR 106
           K + +L   E    +A+  AA+ E  L+     FL  ++ E T ++ Q  I   VDI S 
Sbjct: 126 KTQSKLEKAEAQEEEASVRAARAE-LLLAEEPGFLVGEDGEDTAKILQTDIVEAVDIASA 185

Query: 107 RNQHDIILPALGPYSLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFL 166
               D+ L   GPY L+Y+  GR++A+ GR+GH+A +D     L+ E  V E VRD+ FL
Sbjct: 186 AKHFDLNLRQFGPYRLNYSRTGRHLALGGRRGHVAALDWVTKKLMCEINVMEAVRDIHFL 245

Query: 167 HNDCSLL-----YPYIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVT 226
           H++  L      + YIY+  G ELHC++    V RL+FL  HFLLA+ +++G L + DV+
Sbjct: 246 HSEALLAVAQNRWLYIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATTSETGFLTYLDVS 305

Query: 227 TGSMAGVFRTGLGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSL 286
            G +        GR  VM  NP+N VI  GHS G+V++W P    PL K+LCH+G V ++
Sbjct: 306 VGKIVTALNVRAGRLSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEPLAKILCHRGGVRAV 365

Query: 287 AFHPNGHLMATSGSERKIKIWDLR-KFEVL--QTLPGHAKTLNFSQKGLLAYGTGSCVQV 346
           A    G  MATSG + ++KI+DLR  F+ L  +TLP  A  L FSQ+GLL  G G  V +
Sbjct: 366 AVDSTGTYMATSGLDHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGLLVAGMGDVVNI 425

Query: 347 LSNVSGAQKYT---RYMTHSIEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNF 406
            +    A   +    Y+TH +  G+  G   F P+EDVLG+GHS G++S+L+PG+ EPNF
Sbjct: 426 WAGQGKASPPSLEQPYLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTSMLVPGAAEPNF 485

Query: 407 DSWVANPFETSKQRREKEVRSLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEE 466
           D    NP+ + KQR+E EV++LL+K+P E I LNP  L  V  V  +++  KKER     
Sbjct: 486 DGLENNPYRSRKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQ--KKERIERLG 545

Query: 467 AAVDAAKNITMKKKTKGRNKPTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEV 526
              DA      K K KGR+      K+K++++++  +  +   + +++  +K+  +    
Sbjct: 546 YDPDAKAAFQPKAKQKGRSSTASLVKRKKKVMDQEHRDKVRQSLEQQQQKKKQDMAMPPG 605

Query: 527 ELPKSLQRFARK 528
             P +L RF R+
Sbjct: 606 ARPSALDRFVRR 612

[Close]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot
Match: O15213 (WD repeat-containing protein 46 OS=Homo sapiens OX=9606 GN=WDR46 PE=1 SV=3)

HSP 1 Score: 279.6 bits (714), Expect = 7.1e-74
Identity = 179/486 (36.83%), Postives = 273/486 (56.17%), Query Frame = 0


Query: 53  AAREDLYGKAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDI 112
           A  E+   KAA++     + L+     FLE ++ E T ++ Q  I   VDI S     D+
Sbjct: 137 AEEEETSIKAARS-----ELLLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFDL 196

Query: 113 ILPALGPYSLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNDCSL 172
            L   GPY L+Y+  GR++A  GR+GH+A +D     L+ E  V E VRD+ FLH++  L
Sbjct: 197 NLRQFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEALL 256

Query: 173 L-----YPYIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAG 232
                 + +IY+  G ELHC++    V RL+FL  HFLLA+ +++G L + DV+ G +  
Sbjct: 257 AVAQNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVA 316

Query: 233 VFRTGLGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNG 292
                 GR DVM  NP+N VI  GHS G+V++W P    PL K+LCH+G V ++A    G
Sbjct: 317 ALNARAGRLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTG 376

Query: 293 HLMATSGSERKIKIWDLR-KFEVL--QTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSG 352
             MATSG + ++KI+DLR  ++ L  +TLP  A  L FSQ+GLL  G G  V + +    
Sbjct: 377 TYMATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGK 436

Query: 353 AQKYT---RYMTHSIEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVAN 412
           A   +    Y+TH +     +    F P+EDVLG+GH+ G +S+L+PG+GEPNFD   +N
Sbjct: 437 ASPPSLEQPYLTHRLSG--PVHGLQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESN 496

Query: 413 PFETSKQRREKEVRSLLDKLPPETISLNPSKLGTVRPVAKKE-KKTKKEREAEEEAAVDA 472
           P+ + KQR+E EV++LL+K+P E I L+P  L  V  ++ ++ KK + ER   +     A
Sbjct: 497 PYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQIERLGYDP---QA 556

Query: 473 AKNITMKKKTKGRNKPTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKS 527
                 K K KGR+      K+KR+++++  +  +   ++++    K  ++      P +
Sbjct: 557 KAPFQPKPKQKGRSSTASLVKRKRKVMDEEHRDKVRQSLQQQH--HKEAKAKPTGARPSA 610

[Close]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot
Match: Q5TJE7 (WD repeat-containing protein 46 OS=Canis lupus familiaris OX=9615 GN=WDR46 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-73
Identity = 184/489 (37.63%), Postives = 280/489 (57.26%), Query Frame = 0


Query: 53  AAREDLYGKAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDI 112
           A  E++  KAA++     + L+     FLE ++ E T +++Q  I   VDI S     D+
Sbjct: 138 AEEEEISIKAARS-----ELLLAEEPGFLEGEDGEDTAKIRQAEIVEAVDIASAAKHFDL 197

Query: 113 ILPALGPYSLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNDCSL 172
            L   GPY L+Y+  GR++A  G +GH+A +D     L+ E  V E VRD+ FLH++   
Sbjct: 198 NLRQFGPYRLNYSPVGRHLAFGGHRGHVATLDWVTKRLMCEINVMEAVRDIRFLHSEALF 257

Query: 173 L-----YPYIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAG 232
                 + +IY+  G ELHC++    V RL+FL  HFLLA+ +++G L + DV+ G +  
Sbjct: 258 AVAQNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVA 317

Query: 233 VFRTGLGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNG 292
                 GR DVM  NP+N VI  GHS G+V++W P    PL K+LCH+G V ++A    G
Sbjct: 318 ALNARAGRLDVMTKNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTG 377

Query: 293 HLMATSGSERKIKIWDLR-KFEVL--QTLPGHAKTLNFSQKGLLAYGTGSCVQVLSN--- 352
             MATSG + ++KI+DLR  F+ L  +TLP  A  L FSQ+GLLA G    V +      
Sbjct: 378 TYMATSGLDHQLKIFDLRGMFQPLSARTLPQGAGHLAFSQRGLLAAGMSDVVNIWMGQGM 437

Query: 353 VSGAQKYTRYMTHSIEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVAN 412
            S       Y+TH +  G+  G   F P+EDVLG+GHS G +S+L+PG+ EPNFD    N
Sbjct: 438 ASPPSLEQPYLTHRL-SGHVHG-LHFCPFEDVLGLGHSGGITSMLVPGAAEPNFDGLENN 497

Query: 413 PFETSKQRREKEVRSLLDKLPPETISLNPSKLGTVRPVA-KKEKKTKKEREAEEEAAVDA 472
           P+ + KQR+E EV++LL+K+P E I L+P  L  V  ++ ++EKK + ER   +    +A
Sbjct: 498 PYRSQKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQEKKERIERLGYDP---EA 557

Query: 473 AKNITMKKKTKGRNKPTKKEKKKREIVEKAKKPFLHDQIRE--EELSRKRPRSSEEVEL- 527
                 K K KGR+      K++R++++K  +    D++R+  E+  +K+ + ++ ++  
Sbjct: 558 KAPFQPKPKQKGRSSTASLVKRRRKVMDKEHR----DKVRQSLEQQPQKQEKKAKPLKAR 612

[Close]

BLAST of Sed0004918 vs. ExPASy TrEMBL
Match: A0A5D3BDN6 (Putative U3 small nucleolar RNA-associated protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00120 PE=4 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 9.5e-263
Identity = 463/536 (86.38%), Postives = 495/536 (92.35%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           ME+ELGN  AER LPPTEQE+S+EI+VK+ KY+RGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEKELGNVVAERILPPTEQEISNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           S+DYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNR+GTELHCLKEHGSVLRLQFLKNHFLL SINK GQLH+QDVTTGSM G FRTGLGR
Sbjct: 181 YIYNREGTELHCLKEHGSVLRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSVAMWKPTS+APLVKMLCH GPVS+LAFHPNGHLMATSG+
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGA 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGS VQVL ++SGAQ YTRYM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQVLGDLSGAQSYTRYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MAKGYQIGKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GT+  V KKEKKTKKER+AEEEAAVDAAK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTLVAVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKK EI+EKAK+PFLH+QI+EEELSRKR R SEEVELPKSLQRFA KKTAT
Sbjct: 481 PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKRSRLSEEVELPKSLQRFAHKKTAT 536

[Close]

BLAST of Sed0004918 vs. ExPASy TrEMBL
Match: A0A1S3C483 (probable U3 small nucleolar RNA-associated protein 7 OS=Cucumis melo OX=3656 GN=LOC103496480 PE=4 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 9.5e-263
Identity = 463/536 (86.38%), Postives = 495/536 (92.35%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           ME+ELGN  AER LPPTEQE+S+EI+VK+ KY+RGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEKELGNVVAERILPPTEQEISNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           S+DYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNR+GTELHCLKEHGSVLRLQFLKNHFLL SINK GQLH+QDVTTGSM G FRTGLGR
Sbjct: 181 YIYNREGTELHCLKEHGSVLRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSVAMWKPTS+APLVKMLCH GPVS+LAFHPNGHLMATSG+
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGA 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGS VQVL ++SGAQ YTRYM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQVLGDLSGAQSYTRYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MAKGYQIGKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GT+  V KKEKKTKKER+AEEEAAVDAAK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTLVAVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKK EI+EKAK+PFLH+QI+EEELSRKR R SEEVELPKSLQRFA KKTAT
Sbjct: 481 PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKRSRLSEEVELPKSLQRFAHKKTAT 536

[Close]

BLAST of Sed0004918 vs. ExPASy TrEMBL
Match: A0A6J1BX94 (probable U3 small nucleolar RNA-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC111006520 PE=4 SV=1)

HSP 1 Score: 911.8 bits (2355), Expect = 1.4e-261
Identity = 462/538 (85.87%), Postives = 495/538 (92.01%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           MEEE GNA AER LPPTEQEVS E++V+I KYLRGEGANLEVLKDKKLKGQL+ REDLYG
Sbjct: 1   MEEEQGNAVAERVLPPTEQEVSSEMDVRIKKYLRGEGANLEVLKDKKLKGQLSVREDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYTSNGRYM IAGRKGHLA+VDMK+LNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTSNGRYMTIAGRKGHLAIVDMKNLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLAS NK GQLH+QDVTTGSM GVFRTGLGR
Sbjct: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASFNKFGQLHYQDVTTGSMVGVFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGG+VAMWKPTS+APLVKMLCH+ PVS+LAFHPNGHLMATSGS
Sbjct: 241 TDVMQVNPFNGVIATGHSGGTVAMWKPTSSAPLVKMLCHRTPVSALAFHPNGHLMATSGS 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGSCVQ+L + SG Q Y++YM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSCVQILGDPSGTQNYSKYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKLLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNPSK+GTV  V KKEKK+KKEREAEEE+AVD AK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPSKIGTVMSVKKKEKKSKKEREAEEESAVDIAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIR--EEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKKREI+EKAK+PFLH+QI+  EEELSRKRP+ SEEVELPKSLQRFARKKT T
Sbjct: 481 PTKREKKKREIIEKAKRPFLHEQIKEEEEELSRKRPKLSEEVELPKSLQRFARKKTET 538

[Close]

BLAST of Sed0004918 vs. ExPASy TrEMBL
Match: A0A6J1FNM3 (probable U3 small nucleolar RNA-associated protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111445539 PE=4 SV=1)

HSP 1 Score: 910.2 bits (2351), Expect = 4.0e-261
Identity = 463/537 (86.22%), Postives = 497/537 (92.55%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           MEEELG   AER LPPTEQEV +E +VKI KYLRGEGANLEVLKDKKLKGQL+  EDLYG
Sbjct: 1   MEEELGKPVAERILPPTEQEVLNEEDVKIKKYLRGEGANLEVLKDKKLKGQLSVIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAAKVEKWLMP    +LE + LEKTWR++QETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIRQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           SLDYT NGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SLDYTLNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINK GQLH+QDVTTGSMAGVFRTGLGR
Sbjct: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTTGSMAGVFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSV MWKPTS++PLVKMLCHQGPVS+LAFHPNGHLMATSG 
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVVMWKPTSSSPLVKMLCHQGPVSALAFHPNGHLMATSGC 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLA GTGS VQ+L +++G+Q YTRYM+HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLACGTGSYVQILGDLAGSQNYTRYMSHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSIL+PGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MVKGYQIGKILFRPYEDVLGIGHSMGWSSILVPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETI+LNPSK+GTV  V KKEKKTKKEREAEEE+A+DAAKNITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETIALNPSKIGTVMAVKKKEKKTKKEREAEEESAIDAAKNITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIR-EEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKKREI++K+KKPFL +QI+ EEELSRKRPRSSEEVELPKSLQRFARKKTAT
Sbjct: 481 PTKREKKKREIIDKSKKPFLQEQIKEEEELSRKRPRSSEEVELPKSLQRFARKKTAT 537

[Close]

BLAST of Sed0004918 vs. ExPASy TrEMBL
Match: A0A0A0LQI6 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G385060 PE=4 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 8.9e-261
Identity = 459/536 (85.63%), Postives = 493/536 (91.98%), Query Frame = 0


Query: 1   MEEELGNAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYG 60
           ME+ELGN   ER LPPTEQEVS+EI+VK+ KY+RGEGANLEVLKDKKLKGQL+A EDLYG
Sbjct: 1   MEKELGNVVTERILPPTEQEVSNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSAIEDLYG 60

Query: 61  KAAKAAAKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPY 120
           K+AKAAA+VEKWLMP    +LE + LEKTWR+KQETISHEVDILSRRNQHDIILPALGPY
Sbjct: 61  KSAKAAAEVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 121 SLDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYP 180
           S+DYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHN+         YP
Sbjct: 121 SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 181 YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGR 240
           YIYNR+GTELHCLKEHGSV RLQFLKNHFLL SINK GQLH+QDVTTGSM G FRTGLGR
Sbjct: 181 YIYNREGTELHCLKEHGSVRRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 241 TDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGS 300
           TDVMQ NPFNGVIATGHSGGSVAMWKPTS+APLVKMLCH GPVS+LAFHPNGHLMATSG+
Sbjct: 241 TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGA 300

Query: 301 ERKIKIWDLRKFEVLQTLPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHS 360
           ERKIK+WDLRKFEVLQTLPGHAKTL+FSQKGLLAYGTGS VQ+L + SGAQ Y RYM HS
Sbjct: 301 ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQILGDFSGAQNYNRYMAHS 360

Query: 361 IEKGYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVR 420
           + KGYQIGK LFRPYEDVLGIGHSMGWSSILIPGSGEPNFD+WVANPFETSKQRREKEVR
Sbjct: 361 MAKGYQIGKILFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 421 SLLDKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNK 480
           SLLDKLPPETISLNP+K+GT+  V KKEKKTKKER+AEEEAAVDAAK ITMKKKTKGRNK
Sbjct: 421 SLLDKLPPETISLNPTKIGTLMAVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNK 480

Query: 481 PTKKEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARKKTAT 532
           PTK+EKKK EI+EKAK+PFLH+QI+EEELSRK+ R SEEVELPKSLQRFARKKTAT
Sbjct: 481 PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKKSRLSEEVELPKSLQRFARKKTAT 536

[Close]

BLAST of Sed0004918 vs. TAIR 10
Match: AT3G10530.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 699.1 bits (1803), Expect = 2.7e-201
Identity = 358/529 (67.67%), Postives = 420/529 (79.40%), Query Frame = 0


Query: 7   NAAAERTLPPTEQEVSDEINVKITKYLRGEGANLEVLKDKKLKGQLAAREDLYGKAAKAA 66
           N   E+ LPP EQE   E+  K+ KYLRGEGANLE LKDKKLK QLA+RE LYGK+AKAA
Sbjct: 8   NNLMEKVLPPVEQESDVELETKVKKYLRGEGANLETLKDKKLKTQLASREKLYGKSAKAA 67

Query: 67  AKVEKWLMPLGSSFLEVDELEKTWRVKQETISHEVDILSRRNQHDIILPALGPYSLDYTS 126
           AK+EKWL+P  + +LE + LEKTWRVKQ  I++EVDILS RNQ+DI+LP  GPY LD+T+
Sbjct: 68  AKIEKWLLPAEAGYLETEGLEKTWRVKQTDIANEVDILSSRNQYDIVLPDFGPYKLDFTA 127

Query: 127 NGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHND-----CSLLYPYIYNRD 186
           +GR+M   GRKGHLAL+DM +++LIKE QV+ETVRDV FLHND         Y YIY RD
Sbjct: 128 SGRHMLAGGRKGHLALLDMMNMSLIKEIQVRETVRDVAFLHNDQFFAAAQKKYAYIYGRD 187

Query: 187 GTELHCLKEHGSVLRLQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGRTDVMQA 246
           GTELHCLKE G V RL+FLKNHFLLAS+N SGQLH+QDVT G M    RTG GRTDVM+ 
Sbjct: 188 GTELHCLKERGPVARLRFLKNHFLLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEV 247

Query: 247 NPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGSERKIKI 306
           NP+N V+  GHSGG+V MWKPTS APLV+M CH GPVSS+AFHPNGHLMATSG ERKIKI
Sbjct: 248 NPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKI 307

Query: 307 WDLRKFEVLQTLPG-HAKTLNFSQKGLLAYGTGSCVQVLSNVSG--AQKYTRYMTHSIEK 366
           WDLRKFE +QT+   HAKTL+FSQKGLLA GTGS VQ+L + SG  +  YTRYM HS+ K
Sbjct: 308 WDLRKFEEVQTIHSFHAKTLSFSQKGLLAAGTGSFVQILGDSSGGSSHNYTRYMNHSMVK 367

Query: 367 GYQIGKTLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLL 426
           GYQI K +FRPYEDV+GIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEV SLL
Sbjct: 368 GYQIEKVMFRPYEDVIGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVHSLL 427

Query: 427 DKLPPETISLNPSKLGTVRPVAKKEKKTKKEREAEEEAAVDAAKNITMKKKTKGRNKPTK 486
           DKLPPETI L+PSK+G +RP  +KEK ++ E EAE+E A++AAK+  +K KTKGRNKP+K
Sbjct: 428 DKLPPETIMLDPSKIGAMRPSRRKEKPSRGEIEAEKEVAIEAAKSTELKNKTKGRNKPSK 487

Query: 487 KEKKKREIVEKAKKPFLHDQIREEELSRKRPRSSEEVELPKSLQRFARK 528
           + KKK+E+VE AK+ F  +Q     + ++R       ELP SL+RFARK
Sbjct: 488 RTKKKKEMVENAKRTF-PEQEHNTAIKKRRIVEDAAAELPTSLKRFARK 535

[Close]

BLAST of Sed0004918 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 60.1 bits (144), Expect = 6.3e-09
Identity = 39/122 (31.97%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 233 LGRTDVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMAT 292
           L   D +Q +P    IATG S  +V +W   +   +   + H+  V SLA  P+G  MA+
Sbjct: 502 LSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMAS 561

Query: 293 SGSERKIKIWDLRKFEVLQTLPGHAK---TLNFSQKG-LLAYGTGSCVQVLSNVSGAQKY 351
              +  I +WDL     +  L GH     +L++S +G LLA G+  C   L +V+ + K 
Sbjct: 562 GDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 621

[Close]

BLAST of Sed0004918 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 8.3e-09
Identity = 30/89 (33.71%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 227 GVFRTGLGRT---DVMQANPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAF 286
           G  +T  G T     ++ +P    + +G     V +W  T+   L +  CH+GP+ SL F
Sbjct: 133 GCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 192

Query: 287 HPNGHLMATSGSERKIKIWDLRKFEVLQT 313
           HP   L+AT  ++R +K WDL  FE++ T
Sbjct: 193 HPLEFLLATGSADRTVKFWDLETFELIGT 221

[Close]

BLAST of Sed0004918 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-08
Identity = 48/187 (25.67%), Postives = 86/187 (45.99%), Query Frame = 0


Query: 186 HCLKEHGSVLR---LQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGRTDVMQA- 245
           + L +H + +R   +     +F+ AS++  G   F D+++GS            D   A 
Sbjct: 303 YTLNDHSAEVRAVTVHPTNKYFVSASLD--GTWCFYDLSSGSCLAQVSDDSKNVDYTAAA 362

Query: 246 -NPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGSERKIK 305
            +P   ++ TG S   V +W   S A + K   H G V++++F  NG+ +AT+ +E  ++
Sbjct: 363 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATA-AEDGVR 422

Query: 306 IWDLRKFEVLQT-LPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHSIEKG 365
           +WDLRK    ++ L   A ++ F   G       S ++V            Y T S++  
Sbjct: 423 LWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKV------------YQTASVKAE 474

Query: 366 YQIGKTL 367
           + + KTL
Sbjct: 483 WNLIKTL 474

[Close]

BLAST of Sed0004918 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-08
Identity = 48/187 (25.67%), Postives = 86/187 (45.99%), Query Frame = 0


Query: 186 HCLKEHGSVLR---LQFLKNHFLLASINKSGQLHFQDVTTGSMAGVFRTGLGRTDVMQA- 245
           + L +H + +R   +     +F+ AS++  G   F D+++GS            D   A 
Sbjct: 303 YTLNDHSAEVRAVTVHPTNKYFVSASLD--GTWCFYDLSSGSCLAQVSDDSKNVDYTAAA 362

Query: 246 -NPFNGVIATGHSGGSVAMWKPTSTAPLVKMLCHQGPVSSLAFHPNGHLMATSGSERKIK 305
            +P   ++ TG S   V +W   S A + K   H G V++++F  NG+ +AT+ +E  ++
Sbjct: 363 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATA-AEDGVR 422

Query: 306 IWDLRKFEVLQT-LPGHAKTLNFSQKGLLAYGTGSCVQVLSNVSGAQKYTRYMTHSIEKG 365
           +WDLRK    ++ L   A ++ F   G       S ++V            Y T S++  
Sbjct: 423 LWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKV------------YQTASVKAE 474

Query: 366 YQIGKTL 367
           + + KTL
Sbjct: 483 WNLIKTL 474

The following BLAST results are available for this feature:

BLAST of Sed0004918 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456565.1	2.0e-262	86.38	PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Cucumis melo] >...	[more]
XP_038886607.1	2.0e-262	86.75	probable U3 small nucleolar RNA-associated protein 7 [Benincasa hispida]	[more]
XP_022134200.1	2.8e-261	85.87	probable U3 small nucleolar RNA-associated protein 7 [Momordica charantia] >XP_0...	[more]
XP_022939750.1	8.2e-261	86.22	probable U3 small nucleolar RNA-associated protein 7 [Cucurbita moschata]	[more]
KAG6578785.1	8.2e-261	86.41	hypothetical protein SDJN03_23233, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0004918 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9P4X3	5.3e-85	36.54	Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pomb...	[more]
P40055	3.1e-77	36.64	U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces cerevisiae (strain ...	[more]
Q9Z0H1	9.0e-77	37.60	WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1	[more]
O15213	7.1e-74	36.83	WD repeat-containing protein 46 OS=Homo sapiens OX=9606 GN=WDR46 PE=1 SV=3	[more]
Q5TJE7	1.2e-73	37.63	WD repeat-containing protein 46 OS=Canis lupus familiaris OX=9615 GN=WDR46 PE=3 ...	[more]

BLAST of Sed0004918 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDN6	9.5e-263	86.38	Putative U3 small nucleolar RNA-associated protein 7 OS=Cucumis melo var. makuwa...	[more]
A0A1S3C483	9.5e-263	86.38	probable U3 small nucleolar RNA-associated protein 7 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1BX94	1.4e-261	85.87	probable U3 small nucleolar RNA-associated protein 7 OS=Momordica charantia OX=3...	[more]
A0A6J1FNM3	4.0e-261	86.22	probable U3 small nucleolar RNA-associated protein 7 OS=Cucurbita moschata OX=36...	[more]
A0A0A0LQI6	8.9e-261	85.63	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]

BLAST of Sed0004918 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10530.1	2.7e-201	67.67	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G25150.1	6.3e-09	31.97	TBP-associated factor 5	[more]
AT1G11160.1	8.3e-09	33.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G33340.1	4.1e-08	25.67	MOS4-associated complex 3B	[more]
AT2G33340.2	4.1e-08	25.67	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 105..144 e-value: 120.0 score: 3.8 coord: 264..303 e-value: 2.3E-8 score: 43.8 coord: 181..219 e-value: 28.0 score: 7.9 coord: 306..340 e-value: 150.0 score: 3.2 coord: 222..261 e-value: 79.0 score: 5.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 273..303 e-value: 1.2E-5 score: 26.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 271..312 score: 15.153581
IPR012952	BING4, C-terminal domain	SMART	SM01033	BING4CT_2	coord: 350..430 e-value: 5.2E-54 score: 195.4
IPR012952	BING4, C-terminal domain	PFAM	PF08149	BING4CT	coord: 351..429 e-value: 1.7E-33 score: 114.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 118..386 e-value: 3.4E-28 score: 100.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..531
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..523
None	No IPR available	PANTHER	PTHR14085:SF4	BNAANNG36350D PROTEIN	coord: 9..527
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 271..305 score: 11.708317
IPR040315	WD repeat-containing protein WDR46/Utp7	PANTHER	PTHR14085	WD-REPEAT PROTEIN BING4	coord: 9..527
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 116..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004918.1	Sed0004918.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding