Sed0004902 (gene) Chayote v1

Overview
NameSed0004902
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG11: 2705667 .. 2706388 (+)
RNA-Seq ExpressionSed0004902
SyntenySed0004902
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTCAAGATCATAGCTTCTTCTTCTTCTTCTTCTTCACGAGCCTCCAATTTCTTGAACCCACTTCTCAATTTCGCCATTTCAAATCCCATAATCAAACCCAAATCCCCAATTTTCAAGACATTCACACCAATTTCCCACACACTTGCAGCCCAAACATCAATCGTTTGCGCGAGGAGGAAGAAGAAGAAGAGGCGAGCTGGGTTTCAAAGATCACCCAAATTGGCGCTTCAATTGGCTTCCCTCTTAGCCGCCAATCTCAACATCTTACCGCCGCCGTTGGATTTGGTTGTCGCGGAATTGTGCGGCGGAGATGGAAACGGAGGTGGTTCGCGGCTGTGGAGGAGATTTGGCGGAGGCGGCGGAGATGGATGGAGAGGTAAAAGGAAGATTATGCTGTTTTTTATTTTGGCTGTGTCTTTGCTTTGTTGTTTTCTACTGATTTTGAGATCGATGACATTTGTGGGGTTCTTGGTTTTTCTCTATTTTGTGTTGCATTCATTCAGCTGTTGCTGAAATGTGCGATTTCAAAGGGTTTCGTTTGGGGATTTGGCCTTTTTGCCATTTTTATTGTCCTCGGATTGAGAAGATCTGATGTGCAAAAATGGGTTGCAAAATTAGGGTTTTACAGTCCGAAGATGAAGAGTTTAAGAAGGAAAATTAAAGGTAAGAAAATTTTCTGGGAGACCTCTAGTGTCAGAGATAGAATTAGAAATTAG

mRNA sequence

ATGCAGCTCAAGATCATAGCTTCTTCTTCTTCTTCTTCTTCACGAGCCTCCAATTTCTTGAACCCACTTCTCAATTTCGCCATTTCAAATCCCATAATCAAACCCAAATCCCCAATTTTCAAGACATTCACACCAATTTCCCACACACTTGCAGCCCAAACATCAATCGTTTGCGCGAGGAGGAAGAAGAAGAAGAGGCGAGCTGGGTTTCAAAGATCACCCAAATTGGCGCTTCAATTGGCTTCCCTCTTAGCCGCCAATCTCAACATCTTACCGCCGCCGTTGGATTTGGTTGTCGCGGAATTGTGCGGCGGAGATGGAAACGGAGGTGGTTCGCGGCTGTGGAGGAGATTTGGCGGAGGCGGCGGAGATGGATGGAGAGGTAAAAGGAAGATTATGCTGTTTTTTATTTTGGCTATCGATGACATTTGTGGGGTTCTTGGTTTTTCTCTATTTTGTGTTGCATTCATTCAGCTGTTGCTGAAATGTGCGATTTCAAAGGGTTTCGTTTGGGGATTTGGCCTTTTTGCCATTTTTATTGTCCTCGGATTGAGAAGATCTGATGTGCAAAAATGGGTTGCAAAATTAGGGTTTTACAGTCCGAAGATGAAGAGTTTAAGAAGGAAAATTAAAGGTAAGAAAATTTTCTGGGAGACCTCTAGTGTCAGAGATAGAATTAGAAATTAG

Coding sequence (CDS)

ATGCAGCTCAAGATCATAGCTTCTTCTTCTTCTTCTTCTTCACGAGCCTCCAATTTCTTGAACCCACTTCTCAATTTCGCCATTTCAAATCCCATAATCAAACCCAAATCCCCAATTTTCAAGACATTCACACCAATTTCCCACACACTTGCAGCCCAAACATCAATCGTTTGCGCGAGGAGGAAGAAGAAGAAGAGGCGAGCTGGGTTTCAAAGATCACCCAAATTGGCGCTTCAATTGGCTTCCCTCTTAGCCGCCAATCTCAACATCTTACCGCCGCCGTTGGATTTGGTTGTCGCGGAATTGTGCGGCGGAGATGGAAACGGAGGTGGTTCGCGGCTGTGGAGGAGATTTGGCGGAGGCGGCGGAGATGGATGGAGAGGTAAAAGGAAGATTATGCTGTTTTTTATTTTGGCTATCGATGACATTTGTGGGGTTCTTGGTTTTTCTCTATTTTGTGTTGCATTCATTCAGCTGTTGCTGAAATGTGCGATTTCAAAGGGTTTCGTTTGGGGATTTGGCCTTTTTGCCATTTTTATTGTCCTCGGATTGAGAAGATCTGATGTGCAAAAATGGGTTGCAAAATTAGGGTTTTACAGTCCGAAGATGAAGAGTTTAAGAAGGAAAATTAAAGGTAAGAAAATTTTCTGGGAGACCTCTAGTGTCAGAGATAGAATTAGAAATTAG

Protein sequence

MQLKIIASSSSSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKRKIMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIFWETSSVRDRIRN
Homology
BLAST of Sed0004902 vs. NCBI nr
Match: XP_038886968.1 (uncharacterized protein LOC120077138 [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 7.8e-67
Identity = 151/231 (65.37%), Postives = 165/231 (71.43%), Query Frame = 0

Query: 1   MQLKIIASSSSSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCAR 60
           MQ   I  SSS S     F NPLLNF +SNPII P+SP   T   +S  L AQTSI+CAR
Sbjct: 1   MQTTAIVPSSSGSI----FFNPLLNFTLSNPIIPPRSPFLSTLVAVSDGLQAQTSIICAR 60

Query: 61  RKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGG 120
           +KKK    GFQRS KL L+LASLL +NL ILPPPLDLVV EL GGDGNGGGSRLWR FGG
Sbjct: 61  KKKKS--PGFQRSTKLMLELASLLVSNLKILPPPLDLVVTELSGGDGNGGGSRLWRGFGG 120

Query: 121 GGGDGWRGKRK--------------IMLFFI-LAIDDICGVLGFSLFCVAFIQLLLKCAI 180
           GG DGWRGKRK              ++LF     ID +CGVLGF+LF VA IQL LK  I
Sbjct: 121 GGYDGWRGKRKKKPLLIGFLIVCGLVLLFMTDFEIDTVCGVLGFALFSVALIQLWLKSGI 180

Query: 181 SKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           SK FVWGFGLF I I LGLRRS++QKWV KLG YSPKMKSLRRKI+GKKIF
Sbjct: 181 SKDFVWGFGLFGILIALGLRRSEMQKWVGKLGIYSPKMKSLRRKIRGKKIF 225

BLAST of Sed0004902 vs. NCBI nr
Match: XP_008454859.1 (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo] >KAA0047954.1 hypothetical protein E6C27_scaffold385G00140 [Cucumis melo var. makuwa] >TYK18321.1 hypothetical protein E5676_scaffold456G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-63
Identity = 141/221 (63.80%), Postives = 161/221 (72.85%), Query Frame = 0

Query: 11  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGF 70
           +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GF
Sbjct: 7   ASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICAR--KKKRSPGF 66

Query: 71  QRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKR 130
           QRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGGGSRLWR FGGG  DGWRGKR
Sbjct: 67  QRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKR 126

Query: 131 K-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGL 190
           K             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGL
Sbjct: 127 KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVLGFGL 186

Query: 191 FAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           F I I LGLRRS+VQKWV KLGFYSPKMKSLRRK+KG++IF
Sbjct: 187 FGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

BLAST of Sed0004902 vs. NCBI nr
Match: KAG7030256.1 (hypothetical protein SDJN02_08603, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-62
Identity = 140/219 (63.93%), Postives = 155/219 (70.78%), Query Frame = 0

Query: 13  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQR 72
           SS  S F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F R
Sbjct: 9   SSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICAR--KKRRRPVFLR 68

Query: 73  SPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK- 132
           S K+ L+LASLLA+NL ILPPPLDLVVAEL GG+GNGGGSRLWRRFGGGG DGWRGKRK 
Sbjct: 69  STKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGWRGKRKK 128

Query: 133 --------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFA 192
                         + +F    +D ICG LGF+LF VA IQL  +  ISK FVWGFGLF 
Sbjct: 129 TPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFGLFG 188

Query: 193 IFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           I I LGLRRS+VQKW  KLGFY PKMKSLRRKI+GKKIF
Sbjct: 189 ILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 225

BLAST of Sed0004902 vs. NCBI nr
Match: AAO45758.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 249.6 bits (636), Expect = 2.6e-62
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0

Query: 11  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGF 70
           +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GF
Sbjct: 7   ASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICAR--KKKRSPGF 66

Query: 71  QRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKR 130
           QRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGGGSRLWR FG G  DGWRGKR
Sbjct: 67  QRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGWRGKR 126

Query: 131 K-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGL 190
           K             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGL
Sbjct: 127 KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVLGFGL 186

Query: 191 FAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           F I I LGLRRS+VQKWV KLGFYSPKMKSLRRK+KG++IF
Sbjct: 187 FGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

BLAST of Sed0004902 vs. NCBI nr
Match: XP_022999122.1 (uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 137/215 (63.72%), Postives = 151/215 (70.23%), Query Frame = 0

Query: 13  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQR 72
           SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F R
Sbjct: 9   SSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICAR--KKRRRPVFLR 68

Query: 73  SPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK- 132
           S KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGSRLWRRFGGGG DGWRGKRK 
Sbjct: 69  STKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGWRGKRKK 128

Query: 133 --------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFA 192
                         + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF 
Sbjct: 129 TPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVWGFGLFG 188

Query: 193 IFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKG 213
           I I LGLRRS+VQKW  KLGFY PK+KSLRRKIKG
Sbjct: 189 ILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKG 221

BLAST of Sed0004902 vs. ExPASy TrEMBL
Match: A0A5D3D456 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00320 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 141/221 (63.80%), Postives = 161/221 (72.85%), Query Frame = 0

Query: 11  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGF 70
           +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GF
Sbjct: 7   ASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICAR--KKKRSPGF 66

Query: 71  QRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKR 130
           QRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGGGSRLWR FGGG  DGWRGKR
Sbjct: 67  QRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKR 126

Query: 131 K-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGL 190
           K             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGL
Sbjct: 127 KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVLGFGL 186

Query: 191 FAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           F I I LGLRRS+VQKWV KLGFYSPKMKSLRRK+KG++IF
Sbjct: 187 FGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

BLAST of Sed0004902 vs. ExPASy TrEMBL
Match: A0A1S3C0R6 (uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 141/221 (63.80%), Postives = 161/221 (72.85%), Query Frame = 0

Query: 11  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGF 70
           +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GF
Sbjct: 7   ASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICAR--KKKRSPGF 66

Query: 71  QRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKR 130
           QRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGGGSRLWR FGGG  DGWRGKR
Sbjct: 67  QRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKR 126

Query: 131 K-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGL 190
           K             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGL
Sbjct: 127 KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVLGFGL 186

Query: 191 FAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           F I I LGLRRS+VQKWV KLGFYSPKMKSLRRK+KG++IF
Sbjct: 187 FGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

BLAST of Sed0004902 vs. ExPASy TrEMBL
Match: Q84KA4 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-62
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0

Query: 11  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGF 70
           +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GF
Sbjct: 7   ASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICAR--KKKRSPGF 66

Query: 71  QRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKR 130
           QRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGGGSRLWR FG G  DGWRGKR
Sbjct: 67  QRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGWRGKR 126

Query: 131 K-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGL 190
           K             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGL
Sbjct: 127 KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVLGFGL 186

Query: 191 FAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF 217
           F I I LGLRRS+VQKWV KLGFYSPKMKSLRRK+KG++IF
Sbjct: 187 FGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

BLAST of Sed0004902 vs. ExPASy TrEMBL
Match: A0A6J1K9Z1 (uncharacterized protein LOC111493602 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493602 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-61
Identity = 137/215 (63.72%), Postives = 151/215 (70.23%), Query Frame = 0

Query: 13  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQR 72
           SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F R
Sbjct: 9   SSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICAR--KKRRRPVFLR 68

Query: 73  SPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK- 132
           S KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGSRLWRRFGGGG DGWRGKRK 
Sbjct: 69  STKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGWRGKRKK 128

Query: 133 --------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFA 192
                         + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF 
Sbjct: 129 TPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVWGFGLFG 188

Query: 193 IFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKG 213
           I I LGLRRS+VQKW  KLGFY PK+KSLRRKIKG
Sbjct: 189 ILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKG 221

BLAST of Sed0004902 vs. ExPASy TrEMBL
Match: A0A6J1KC74 (uncharacterized protein LOC111493602 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493602 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.9e-61
Identity = 137/217 (63.13%), Postives = 152/217 (70.05%), Query Frame = 0

Query: 13  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQR 72
           SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F R
Sbjct: 9   SSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICAR--KKRRRPVFLR 68

Query: 73  SPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK- 132
           S KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGSRLWRRFGGGG DGWRGKRK 
Sbjct: 69  STKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGWRGKRKK 128

Query: 133 --------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFA 192
                         + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF 
Sbjct: 129 TPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVWGFGLFG 188

Query: 193 IFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKK 215
           I I LGLRRS+VQKW  KLGFY PK+KSLRRKIKG +
Sbjct: 189 ILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKGSE 223

BLAST of Sed0004902 vs. TAIR 10
Match: AT5G27440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 61/173 (35.26%), Postives = 91/173 (52.60%), Query Frame = 0

Query: 18  NFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLA 77
           +FLNP  +  +S+        I +  + ISH    Q+ ++CA  KK+K+R G++R  +  
Sbjct: 14  HFLNPQKSLRLSS--------ISRVSSSISHRTQFQSLVLCA--KKRKQRVGYRRITRFL 73

Query: 78  LQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS---RLWRRFGGGGGDGWRGKRKIML 137
               SLLA NL ILP PLDLV+A+L G DG GGG      WR  G G  DGWR K+  + 
Sbjct: 74  FNSLSLLAPNLQILPQPLDLVIADLGGVDGGGGGRGGLGFWR--GWGRFDGWRRKKNKVP 133

Query: 138 FFILAIDDICGVLGFSLFC-VAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRR 187
             +     +C +L    FC ++ I++  +  +    V G  LF + +V  L+R
Sbjct: 134 ILVF----VCVILWIYGFCKISGIEIKSELVLK---VLGLCLFGVTVVKELKR 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886968.17.8e-6765.37uncharacterized protein LOC120077138 [Benincasa hispida][more]
XP_008454859.13.1e-6363.80PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo] >KAA0047954.1 hyp... [more]
KAG7030256.12.0e-6263.93hypothetical protein SDJN02_08603, partial [Cucurbita argyrosperma subsp. argyro... [more]
AAO45758.12.6e-6263.35hypothetical protein [Cucumis melo subsp. melo][more]
XP_022999122.11.1e-6063.72uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D4561.5e-6363.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C0R61.5e-6363.80uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=... [more]
Q84KA41.3e-6263.35Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A6J1K9Z15.3e-6163.72uncharacterized protein LOC111493602 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KC746.9e-6163.13uncharacterized protein LOC111493602 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT5G27440.11.5e-1235.26unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004902.1Sed0004902.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane