Sed0004900 (gene) Chayote v1

Overview


Name	Sed0004900
Type	gene
Organism	Sechium edule (Chayote v1)
Description	recA DNA recombination family protein
Location	LG05: 36237617 .. 36244267 (+)
RNA-Seq Expression	Sed0004900
Synteny	Sed0004900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACTTTTTAAGTTGGGGGTAAATTAAGTTTAAAAATCCTCGACTTTACCAGGTAAAAAAATTGTATAAATAAACCCTGGCTTGCATCTCTTCACTTTCGCTTACCTTGGACTATGGCTTTCATTTCTCACCCACTGGCCTGTAAGACTCATCCATGCCGGACAACGTTTCCGCCATGCTCAACGCCTTTCCGCTCCCACAAATGCTTGCCCTCTTCACTCTCCAATGCACCCAAGCGACTCGGAAAACTTCGCTGCGAGTTCGACGTTAATGGCAATGGCGCTCTTTCCGGCGACTTCGATCCTCGCTCCGTCGACAGGGTAATCCTTCGATTCTTTCTTCTCTGATTTTTCTTTCTGCACCTTGTATTACTGCTTCTCTTTTCTAATTTTGAGCCACAAATGTTCGTAATCCTTTTTGCCCACCTTTATCGTGGTCTCTTTTCATTGCGTGTGTCAAATTCGCGTACAGAACGAGAATCCTCCAAACCTAGTAACTAATGGCACTTCCAGTGCCTTTGCTTATGGATTTCATTACAACTCAGTAGGGGAAGAAAAAGCTACACGCCTATCTAATATATTTGTTCGACTCACACATTAATTGGTACACATCTTGACTATCTCCATTCCTTCCATTCTCTTCATGCCTGGCCTAGGAATGAGCGTGGTTACCCTGATATAATGGAGCATACCTTCGATTTTTCGGTTTTCAAAAAAAATAAAAGTTTTTAGTATCCATGATTGTCCGGGTTAGTTTACACTTACCACGACTATGCACAACATTTGGATTTGAAGGAAACTCGTAAAAAATTAATTCCTAGATAGGTGGCCATCATGGATTGAACCCGTCACCTTAAGCACTCCGGCCACTCCATGATGGTTACTATTCTCCAACATTTGGATGTCAAGAAATTTGTAAAAAATAATTTTGTAGGTAGGTAGGTAGCCTCTTTAAATTGATCATCACCTCCTAGTTACTGGTGACACTCTTGACCACGTCAGGATGGTTCATGCCTATCTAATATTTGAGATGTTTTCTGTGATTATGTTTCGTTTCCAGATATCTACACATTAGTTACTAGTTTCTTTGCAACTTTTGTGCTGTCTCAGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAACAGCTCGTTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGTGGAGCGTTAGTGTATGTCCTCTTTGTTTTTTATTATTTATTTGTTTACTCCCTACTCCCTAGAAGGTCATTAATCTCGTAATTTTTCAACTGATAAACAGAGGTTTAATGGTTCTTTAAAGTTTTAGTTTAGTTTACTATGGTTGTACTTTGTAAAGGTTGGTTGGCAATACGTTTCATCAATGTGTAAGTATTATTCAAATATACCTGAATGAGTTACAATGAGGAGAGATTCTATTTATAGATATTAACCTCAACAGATTGTACTAACAATAATAACTTAATATAACTACTCTACAAACTAACAAAAAGATCAACAATCTAACCACACTTGATTTGCATGATAATTGGAAACTTTTCTATTAAAATTTCGACGGAAAATGTTGCATTTCTTAAATCATCATAATGCAAGCTCAATGTTTTGAGGTTTTCTTGTTAGGTTTAAGTGTCTGTTATCTTCTGTCCATACAGGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGTGCCTTAGGTGGTGGCCTTCCGAAAGGCAGAATTGTTGAGGTATGTTTACTCATTTTTGGGGGTCGGGTTAGGGTATTAAAGTAAGTGAAATTTGTTAAGTTGTGGATGTTGGTATACGAAATCATGGAGTATAAGGTATTTTAGTTGATAGGTTGGAATTGTTAATTTGCTTTGTAATGAGAGTATTCTTTAGCTCGCTACAATAGTAAATGCCAAATTTCTTGTGAGGCTCTGTCATTGTTGCAAACTACCAAAAATATGCCCACACAAGTAGGGACGTGGCCTTTTCAAAATACACTCGATGCCCCCAAAGAAAATGTACAGGAAAATTCAGCTTCAAAAATGGAGAAGGTGGGGTTGATGCCTCTGAAAGTTCAAATAGACTGTTGGAAGAAATGTTTCTGCTCTATAACTATAATTTTTAAATTTGAAATTTACATCTTTAAAGGTCTGTTATAGCCTATGTTTAGTTACATTTATGTACTCGAATAGAAAAATTTGTGTTGACAAAAATGAACCTTTGAAGATAAGCAAGTCTCAAACATGTTTGTACTTTTAGTCTTTTAGATAACGTATGTTTATTACTTTTTTCTTATGTGATATACGTTATTTATCCTGAATATTTTACTTCATGAGAAATGAGCAACATTGTTGCCAAACAATGATATTTAATCTTCTTTTTTCCAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGGTACATACATATATACGTGTGTGTGTTGTGTTGTTACTTCTCAATGTTTTTGATAGGCCTTGCCCAACATTTATTTATAATCAAGAACAAGGTCTCAGGTAAGTTTTGAGAGCCCCCTACCTCTCCACATATCTCACACGGAGATAATAAAAAACATTCTAGACAAAAAGATACCTCTCACCTTCTAATAACTCTCCCTAAATAGTAACATTCTTTCTCTGCCCATTCTAACAAACTTGGGCCCCACAATATAACCCCCACGTCCCTCCTCTCCGTTCACGCTTACGTGCATGAACATTTACAATTGGAGGTCTATCAGTTTTCTACGAAGGCTAGGAAATATACCGGTTTTGTATGTTATTAGAAATAGTACTTATTTAGTTGTGACATGCAGAAACTAGGAGGAAATGCAATGCTTGTGGATGCGGAGCATGCCTTCGATCCAGCATATTCTAAAGCCGTTGGAGTGGATGTAGAAAACTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGAGTAATATATTCTAGTTTGTCTTCACGATTTGCTTGAATGAAATAGTGCTTCTATGGGATGCTTGTGACATTTGTGTATTAATGGATGAATCTTCTTATAACAGTTGCAGATCGTATGTGTAGATCTGGTGCTGTTGATCTCATCTGTGTTGATTCTGTCTCTGCCCTAACACCAAGAGCAGAAATTGAAGTAACATCTGTCACCTTGAGTTTCTGAAACTTTCTTGCGAGATTGCTAATCTTACATTTCTTATCTTTTTGCCGTTTAGGGTGAGATTGGTATGCAGCAAATGGGTCTGCAAGCACGCCTCATGAGCCAAGCTCTGCGTAAAATGTCTGGAAATGCCTCCAAAGCTGGCTGCACTCTCATATTTTTGAATCAAATACGATATAAGGTTATTTTCACTCTTCAGTTAGGTTTTAATAATCCTATCTTCAAAGTTGGGTAGATTTTATGCATGTGGTAATGATGCCAGTTTTCTTGGGGCTCCTTGAGTGTTTAGGGTTTGAATTTTGTTTTGTTTTTCTACAGGGATTTATTTATTTATTTTTAATTTTTTAAGTGATGAAAAGTTATGTTTCTTCTCTAAATTAAATTAATTAAAATAAATACCATAGTCGGTTTGGCTAGGCCGGTTTAATTGCACCCTTTGTGAGAATGAATTCTACTCTAACGTCTAACCTTGTTTCTACTTCTAGTACTTTATCACTATCCTTGCACGTAAAATATTTCACGCCATAATGGTATTGCTGTTCTGAATTTGATTAGATTGGTGTGTATTATGGGAATCCAGAAGTGACAAGTGGGGGGATTGCGCTAAAGTTTTTCGCCTCACTTCGACTTGAAATACGTTCTATTGGGAAGCTAAAGTCTGTAAGAACGCTCTCTCTTATTTGCTTTACCTGAACCAATTTAAAAGTCAAATTAAACGCTCAATTAGAAAGTACAGAGGCAATTAAAAAAAATTACAAAAAAATATTTTTAATTACAATTTACATTAATTCCATAACATTCAACTAAGGTGAGCCTGTGCTTCCTTCTTTTAAAGGCCAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTAATCAATTTTTTTCTTAAAATCTTGTCAATTTATAAGAGCCTTTTTTAAAAAAAATTTATCAATTGGTTCCCATTGTTTCAAAAAAAAATTTAGTAGTGGTTGGGGTAATTAAGTTTGATGTGGAGCTTGATGGAGGATTGTGGCATGTAATTTAGTTCTTGAAATATTAGTCATGCTTGTAATTTAAAGGCTCTAAATGTATACCATGCTTCCAATCCTTTTTCGTTGAACATAAATATCTTAACCTAAATGGGTTGCTGTAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATATTTGGAGAGGGAGTAAGTAAACTGGTAAGTATTGTAGGAGTGAGCATTTTTTAATTGCAGGTGCAAAATATCGTTTGTTCTAACTTTATATTCTGTTATTTTCTTCCCTCAGGGTTGCGTTTTAGATTGTGCTGAAATTATGGACATTGTACTTAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTTGTTTTGTGCTCATATTAATCGGTTTTTCGGAGAAACATTGGATATTTGATTTAAGTTGCTCGAGTAGATTTCATCATTTACGCTTTTTATGTTTTGATTTTCCTATTTTGAACTTTGTTTTCTATTGACTAAAGAGCTACTTATTGTTATGCGTTTCTTTAAAATTATTATTTTTGCCAAAGGTTGGGACAGGGAAGAGACAAAGCTCTGCAATACTTAAAGGATAATCCTGCTCTTCCAGAGGAAATTGAGAAGGTTTGTTCTTGCGACAGACATACTATCTGAACACATAATTGATATTACAGATTTTCCTCTGGGCAACAGCGCAAGGCTTAGTTGTCCATGCCCTTTTTTTTTTTCTGAAAACATTCTCATAGTGTAATAGGGGAGAGAGGGCCTCAAAGAGACCATTTTCATAAGATAACAATCAATTCCTAGAGTTCTATGGAAAATGGACATCCAAGAGCGGGGTGTGATCATAACAGCACTAATGCACCAAATTCTATCAGAACTCTGCAGTTAAGCATGCTTGAACGAGAGTAGTACTAAGTTGGGTGACCACTTGGGAAGTTCTCGTACTTTTAAGCCAAAACGAGCAATAGCTCAAGTGACATCAGCGTGCACACCTAGTGACCTTGAGGTCCATAGGTTCAAATCCTCCACCCTCAGATGTTGTATCCTGAAAAGAAAAAAAAAACATCCAAGTGCTTTAGAACTAAGCCAAACTTAGTCCATGTCCAATTTTTCAACCTCAACCGTTTTTCCTTTGGGCTTTAGTTCTGGTCCATGTCCGACTTTTGAATCCTCCAAACAAAACAAACTGTCCCTATGCCATCATTGGTCAAATGCTATCTTTATGCAAGTTATTGATGGCAGCTTCGAACTCTTTGACTCTAGAGACGTTTTTGGGTTACAATTATGTGCCAATAATAAATAAAGGGTTGGAGAGAATCTGTTAAGTTGGCTCAAGGGGTTGTCCCATTAGGTTAGTCGAGCTATGTGAGAGCTGCCTTGGACACTCACAAATATAAAATAAAATATTATGCCAATAATATTCTCTTGTGTAAATACCACTTTAAACAGAAAACATGGTCGAAATCGTAAACAATTTGTAGGTGGCAGTTAATACTCGTTTGTCATGTGTAGTGACTATTATACTATTTTATGAAGACATTGTACTTGAACAGTTTTTGGAATCACCATGGTTGGATCAACTAAACAAAATTTAACATCATGGATTTTTATCCCTCCGTTTATCCTTAGCAATGTAATTAAATGATATTGTTCGTTTCTTGTATACAAAGGACAAACTTGAAGTTAATTAAAGCCCGTGTTTTCTGTTTCATTTATCAACCGTCAAAAATAAGATCAATCCACTGTCAACCAAAACATAGCTCTAGTGATATATTGCGTAATCTAGTAGCATTACTCTAGTGATATCTTGTATAACTTAGTTGTCATGAAGTTACATACTCGAATCCCTCTCTCCAAATGTTTTTGAATAAAAAAAAAAATTAATCCACTTATCCTTTGATATTACCCGTCTTTTAAGAAAGCATTTGAATCTTTGAATTTTGAAATGTATGGCAGGCGATGCAGACAAAACTGATGAGTGGAACTGTTCAAATGGGATTTCAATCCATTAAAAAGCCATCGCCAAACCAAGAAGAGGTCCTTGAGGAGTTTGAATAAACCAATATGTTCTACGATTAAGTAGTAGCAACAGAGATTACAAGCAGAAGCAACATTTCTTCTATGGAAGAGGAGTTGATAAGCTCCCATACATCCATTTTCTGTGGTACATCCAGTGATGTTGGGATCAAACCATTTTGCCCAATTTTTAGCTAGCGCGAGCCAGATGCGATGAAGCTGAGAACTGGTTCCTTTGCTTTTTGACCACTGAAGACAACGTTGCGGATCATCCTCGAAAATGATTGGAGTCCTTTGGTCTCGCTTACAAGGTTGGTATAACTTGAAACTAAATTATTGGAAAGCTGATCTTAATGTACTGTTGTAATTTTAACCAACTTGATAGAGTATATTTCATATTTTATCTAAGTTTACAAACATAAATTTC

mRNA sequence

GCACTTTTTAAGTTGGGGGTAAATTAAGTTTAAAAATCCTCGACTTTACCAGGTAAAAAAATTGTATAAATAAACCCTGGCTTGCATCTCTTCACTTTCGCTTACCTTGGACTATGGCTTTCATTTCTCACCCACTGGCCTGTAAGACTCATCCATGCCGGACAACGTTTCCGCCATGCTCAACGCCTTTCCGCTCCCACAAATGCTTGCCCTCTTCACTCTCCAATGCACCCAAGCGACTCGGAAAACTTCGCTGCGAGTTCGACGTTAATGGCAATGGCGCTCTTTCCGGCGACTTCGATCCTCGCTCCGTCGACAGGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAACAGCTCGTTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGTGGAGCGTTAGTGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGTGCCTTAGGTGGTGGCCTTCCGAAAGGCAGAATTGTTGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGAGGAAATGCAATGCTTGTGGATGCGGAGCATGCCTTCGATCCAGCATATTCTAAAGCCGTTGGAGTGGATGTAGAAAACTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGTATGTGTAGATCTGGTGCTGTTGATCTCATCTGTGTTGATTCTGTCTCTGCCCTAACACCAAGAGCAGAAATTGAAGGTGAGATTGGTATGCAGCAAATGGGTCTGCAAGCACGCCTCATGAGCCAAGCTCTGCGTAAAATGTCTGGAAATGCCTCCAAAGCTGGCTGCACTCTCATATTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGGAATCCAGAAGTGACAAGTGGGGGGATTGCGCTAAAGTTTTTCGCCTCACTTCGACTTGAAATACGTTCTATTGGGAAGCTAAAGTCTGCCAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATATTTGGAGAGGGAGTAAGTAAACTGGGTTGCGTTTTAGATTGTGCTGAAATTATGGACATTGTACTTAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTGGGACAGGGAAGAGACAAAGCTCTGCAATACTTAAAGGATAATCCTGCTCTTCCAGAGGAAATTGAGAAGGCGATGCAGACAAAACTGATGAGTGGAACTGTTCAAATGGGATTTCAATCCATTAAAAAGCCATCGCCAAACCAAGAAGAGGTCCTTGAGGAGTTTGAATAAACCAATATGTTCTACGATTAAGTAGTAGCAACAGAGATTACAAGCAGAAGCAACATTTCTTCTATGGAAGAGGAGTTGATAAGCTCCCATACATCCATTTTCTGTGGTACATCCAGTGATGTTGGGATCAAACCATTTTGCCCAATTTTTAGCTAGCGCGAGCCAGATGCGATGAAGCTGAGAACTGGTTCCTTTGCTTTTTGACCACTGAAGACAACGTTGCGGATCATCCTCGAAAATGATTGGAGTCCTTTGGTCTCGCTTACAAGGTTGGTATAACTTGAAACTAAATTATTGGAAAGCTGATCTTAATGTACTGTTGTAATTTTAACCAACTTGATAGAGTATATTTCATATTTTATCTAAGTTTACAAACATAAATTTC

Coding sequence (CDS)

ATGGCTTTCATTTCTCACCCACTGGCCTGTAAGACTCATCCATGCCGGACAACGTTTCCGCCATGCTCAACGCCTTTCCGCTCCCACAAATGCTTGCCCTCTTCACTCTCCAATGCACCCAAGCGACTCGGAAAACTTCGCTGCGAGTTCGACGTTAATGGCAATGGCGCTCTTTCCGGCGACTTCGATCCTCGCTCCGTCGACAGGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAACAGCTCGTTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGTGGAGCGTTAGTGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGTGCCTTAGGTGGTGGCCTTCCGAAAGGCAGAATTGTTGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACCCTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGAGGAAATGCAATGCTTGTGGATGCGGAGCATGCCTTCGATCCAGCATATTCTAAAGCCGTTGGAGTGGATGTAGAAAACTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGTATGTGTAGATCTGGTGCTGTTGATCTCATCTGTGTTGATTCTGTCTCTGCCCTAACACCAAGAGCAGAAATTGAAGGTGAGATTGGTATGCAGCAAATGGGTCTGCAAGCACGCCTCATGAGCCAAGCTCTGCGTAAAATGTCTGGAAATGCCTCCAAAGCTGGCTGCACTCTCATATTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGGAATCCAGAAGTGACAAGTGGGGGGATTGCGCTAAAGTTTTTCGCCTCACTTCGACTTGAAATACGTTCTATTGGGAAGCTAAAGTCTGCCAAAGGAGATGAAGAAATTGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCTGAATTTGAAATTATATTTGGAGAGGGAGTAAGTAAACTGGGTTGCGTTTTAGATTGTGCTGAAATTATGGACATTGTACTTAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTGGGACAGGGAAGAGACAAAGCTCTGCAATACTTAAAGGATAATCCTGCTCTTCCAGAGGAAATTGAGAAGGCGATGCAGACAAAACTGATGAGTGGAACTGTTCAAATGGGATTTCAATCCATTAAAAAGCCATCGCCAAACCAAGAAGAGGTCCTTGAGGAGTTTGAATAA

Protein sequence

MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSGDFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE

Homology

[Close]

BLAST of Sed0004900 vs. NCBI nr
Match: KAG7037524.1 (DNA repair protein recA-like 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 767.7 bits (1981), Expect = 5.2e-218
Identity = 387/418 (92.58%), Postives = 397/418 (94.98%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+PLACKT PCRT FPPC+ P R     P SLSN  KR+G+LRCEFDVN NGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLK+NPAL EEIEK +QT L SGTVQMGFQSI+KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. NCBI nr
Match: XP_023524459.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765.4 bits (1975), Expect = 2.6e-217
Identity = 385/418 (92.11%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+P+ACKT PCRT FPPC+ P R     P SLSN  KR+GKLRCEFDVN NGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLK+NPAL +EIEK +QT L SGTVQMGFQSI+KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQDEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. NCBI nr
Match: XP_022981737.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 765.4 bits (1975), Expect = 2.6e-217
Identity = 386/418 (92.34%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+PLACKT PCRT FPPC+   R     P SLSN  KR+GKLRCEFDVN NGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAASSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLKDNPAL +EIEK +QT L SGTVQMGFQS++KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDNPALQDEIEKTVQTTLTSGTVQMGFQSLRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. NCBI nr
Match: XP_022940951.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 764.6 bits (1973), Expect = 4.4e-217
Identity = 385/418 (92.11%), Postives = 395/418 (94.50%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+P+ACKT PCRT FPPC+ P R     P SLSN  KR+GKLRCEFD N NGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDFNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLK+NPAL EEIEK +QT L SGTVQMGFQSI+KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. NCBI nr
Match: KAG6608007.1 (DNA repair protein recA-like 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 764.6 bits (1973), Expect = 4.4e-217
Identity = 386/418 (92.34%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+PLACKT PCRT FPPC+ P R     P SLSN  KR+G+LRCEFDVN NGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLK+NPAL EEIEK +QT L SGTVQMGFQSI+KP  NQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLSNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot
Match: Q39199 (DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 2.6e-172
Identity = 317/409 (77.51%), Postives = 347/409 (84.84%), Query Frame = 0


Query: 19  FPPCST---PFRSHKCL------PSSLSNAPKRLGKLRCEFDVNGNGALSGDFDPRSVDR 78
           F PCS+     R   C       P ++  A K   K+  EFD   NGALS D D R +DR
Sbjct: 24  FTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDR 83

Query: 79  KKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGP 138
           +KALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GP
Sbjct: 84  QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGP 143

Query: 139 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALE 198
           ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE
Sbjct: 144 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALE 203

Query: 199 IADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 258
            ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC
Sbjct: 204 TADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 263

Query: 259 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVR 318
           TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIRS GK+KS+KGDE+IG+R RVR
Sbjct: 264 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVR 323

Query: 319 VQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGRDKA 378
           VQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAEIM++V+KKGSWYSY D RLGQGR+KA
Sbjct: 324 VQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKA 383

Query: 379 LQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           LQ+L++NPAL +EIEK ++  ++ G V      +   S +     EE E
Sbjct: 384 LQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHREEEEE 432

[Close]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot
Match: P48293 (Protein RecA OS=Arthrospira platensis OX=118562 GN=recA PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.3e-115
Identity = 201/337 (59.64%), Postives = 262/337 (77.74%), Query Frame = 0


Query: 68  DRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIF 127
           +++KAL + +N I  SFGKGS+ RLG +    VET  SG LTLD ALGGGLP+GR++EI+
Sbjct: 9   EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68

Query: 128 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMA 187
           GPESSGKTTLALHAIAE+QK GG A  VDAEHA DP Y+ A+GVD+ENL+V QPD GEMA
Sbjct: 69  GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128

Query: 188 LEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 247
           LEI D++ RS AVD++ VDSV+AL PRAEIEG++G   MGLQARLMSQALRK++GN  K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188

Query: 248 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVR 307
           GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+AS+RL+IR    LK  KG +E GIR +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 248

Query: 308 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGRD 367
           V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE   ++ +KG+WYSY +  +GQGRD
Sbjct: 249 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRD 308

Query: 368 KALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIK 405
           + + Y+++NPA  EEI+K ++  L  G V      +K
Sbjct: 309 RTITYMQENPAFTEEIDKRVRAALAGGAVVSATSVVK 343

[Close]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot
Match: B7JZS9 (Protein RecA OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=recA PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 7.3e-114
Identity = 209/346 (60.40%), Postives = 269/346 (77.75%), Query Frame = 0


Query: 68  DRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIF 127
           D++KAL   +N I  +FGKGS+ RLG A    VET  SG LTLD ALGGGLP+GRI+EI+
Sbjct: 9   DKEKALGLVLNQIERNFGKGSIMRLGDAARMRVETISSGSLTLDLALGGGLPQGRIIEIY 68

Query: 128 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMA 187
           GPESSGKTTLALHAIAEVQK GG A  VDAEHA DP YS A+GVD++NL+V QPD GE A
Sbjct: 69  GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSNALGVDIDNLLVAQPDTGESA 128

Query: 188 LEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 247
           LEI D++ RS AVD++ +DSV+AL PRAEIEGE+G  Q+GLQARLMS+ALRK++GN  K+
Sbjct: 129 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188

Query: 248 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE-EIGIRV 307
           GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+AS+RL+IR I  LK  KG E E GIR 
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 248

Query: 308 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGR 367
           +V+V K+KV+ P++ AEF+IIFG+G+S++GC+LD AE  D+V +KG+WYSY    + QGR
Sbjct: 249 KVKVAKNKVAPPFRIAEFDIIFGKGISRMGCMLDLAEQTDVVNRKGAWYSYNGENISQGR 308

Query: 368 DKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEE 413
           D A++YL+DNP + + IE+ ++ KL  G++     +I +   N+EE
Sbjct: 309 DNAVKYLEDNPEVADTIERQVREKLELGSLNF---AISQTDDNEEE 349

[Close]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot
Match: Q8DH70 (Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=recA PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 9.5e-114
Identity = 201/325 (61.85%), Postives = 258/325 (79.38%), Query Frame = 0


Query: 66  SVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVE 125
           S +++KALE A++ I  SFGKGS+ RLG A    VET  SG LTLD ALGGGLPKGRI+E
Sbjct: 10  SPEKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGGGLPKGRIIE 69

Query: 126 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGE 185
           I+GPESSGKTTLALHAIAEVQK GG A  VDAEHA DP Y+ A+ VD++NL+V QPD GE
Sbjct: 70  IYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAALRVDIQNLLVAQPDTGE 129

Query: 186 MALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 245
            ALEI D++ RS AVD+I VDSV+AL PRAEIEG++G   +GLQARLMSQALRK++GN S
Sbjct: 130 AALEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGDMGESHVGLQARLMSQALRKINGNIS 189

Query: 246 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIR 305
           K GCT+IFLNQ+R KIG+ YGNPE T+GG+ALKF+AS+RL+IR +  LK  KG EE GIR
Sbjct: 190 KTGCTVIFLNQLRQKIGLTYGNPETTTGGVALKFYASVRLDIRRVQTLK--KGTEEFGIR 249

Query: 306 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQG 365
            +V+V K+KV+ P++ AEF+IIFG+G++ LGC+LD AE + ++ +KG+WYSY    L QG
Sbjct: 250 AKVKVAKNKVAPPFRIAEFDIIFGKGIANLGCILDMAEEVGVITRKGAWYSYNGENLAQG 309

Query: 366 RDKALQYLKDNPALPEEIEKAMQTK 391
           RD  + Y+++NP+  +EIE+ ++ +
Sbjct: 310 RDNTINYMEENPSFAQEIEQQVRQR 332

[Close]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot
Match: B1WW59 (Protein RecA OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=recA PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-113
Identity = 204/330 (61.82%), Postives = 261/330 (79.09%), Query Frame = 0


Query: 68  DRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIF 127
           D++KAL   +N I  +FGKGS+ RLG A    VET  +G LTLD ALGGGLP GR+VEI+
Sbjct: 9   DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRVVEIY 68

Query: 128 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMA 187
           GPESSGKTTLALHAIAEVQK GG A  VDAEHA DP YS A+GVD+ NL+V QPD GE A
Sbjct: 69  GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDINNLLVAQPDTGESA 128

Query: 188 LEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 247
           LEI D++ RS AVD++ +DSV+AL PRAEIEGE+G  Q+GLQARLMS+ALRK++GN  K+
Sbjct: 129 LEIVDQLVRSAAVDVVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188

Query: 248 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE-EIGIRV 307
           GC +IFLNQ+R KIG+ YG+PEVT+GG ALKF+AS+RL+IR I  LK  KG E E GIR 
Sbjct: 189 GCVVIFLNQLRQKIGITYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 248

Query: 308 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGR 367
           +V+V K+KV+ P++ AEF+IIFG+G+S++GC+LD AE  D+VL+KG+WYSY    + QGR
Sbjct: 249 KVKVAKNKVAPPFRIAEFDIIFGQGISRMGCMLDLAEQSDVVLRKGAWYSYNGDNISQGR 308

Query: 368 DKALQYLKDNPALPEEIEKAMQTKLMSGTV 397
           D A++YL++NP + E IE+ ++ KL  G++
Sbjct: 309 DNAVKYLEENPKIAETIEQQVREKLELGSL 336

[Close]

BLAST of Sed0004900 vs. ExPASy TrEMBL
Match: A0A6J1IUU1 (DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480803 PE=3 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.2e-217
Identity = 386/418 (92.34%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+PLACKT PCRT FPPC+   R     P SLSN  KR+GKLRCEFDVN NGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAASSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLKDNPAL +EIEK +QT L SGTVQMGFQS++KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDNPALQDEIEKTVQTTLTSGTVQMGFQSLRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. ExPASy TrEMBL
Match: A0A6J1FJT7 (DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111446383 PE=3 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.1e-217
Identity = 385/418 (92.11%), Postives = 395/418 (94.50%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+P+ACKT PCRT FPPC+ P R     P SLSN  KR+GKLRCEFD N NGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDFNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMDIV+KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLK+NPAL EEIEK +QT L SGTVQMGFQSI+KP PNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Sed0004900 vs. ExPASy TrEMBL
Match: A0A6J1C5R2 (DNA repair protein recA homolog 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008660 PE=3 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 1.8e-216
Identity = 380/418 (90.91%), Postives = 397/418 (94.98%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M F+S+PL CKT PCRT  PP +TP R   CLP SLS + +R+G LRCEF+ N NGALSG
Sbjct: 1   MDFVSNPLTCKTFPCRTLLPPWATPSRRRHCLPPSLSLSGRRVGNLRCEFEANVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIMD+++KKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDVIVKKGSWYSYGDH 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLKDNP L +EIEKA+QT L SGTVQMGFQSI+KP PNQEEVLEEF+
Sbjct: 361 RLGQGRDRALQYLKDNPVLQDEIEKAVQTMLASGTVQMGFQSIRKPLPNQEEVLEEFQ 418

[Close]

BLAST of Sed0004900 vs. ExPASy TrEMBL
Match: A0A1S3BAR5 (DNA repair protein recA homolog 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487647 PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 3.5e-212
Identity = 379/418 (90.67%), Postives = 393/418 (94.02%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M  +S+ L CKT PCRT FPPC+T  R  + LPSSLSNA  R+ +LRCEF+VN NGALSG
Sbjct: 1   MVLVSNSLPCKTLPCRTLFPPCATSSRPRQWLPSSLSNASNRVRELRCEFEVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR IGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIM+IV+KKGSWYSYGD 
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQ 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQYLKD PAL +EIEK +QT L SGTVQMGFQSI+KP PNQ EVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDTPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 417

[Close]

BLAST of Sed0004900 vs. ExPASy TrEMBL
Match: A0A0A0LBT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G524580 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 5.1e-211
Identity = 378/418 (90.43%), Postives = 392/418 (93.78%), Query Frame = 0


Query: 1   MAFISHPLACKTHPCRTTFPPCSTPFRSHKCLPSSLSNAPKRLGKLRCEFDVNGNGALSG 60
           M FIS+ + CKT PCRT FP C+      + LPSSLSNA KR+ +LRCEF+VN NGALSG
Sbjct: 1   MIFISNSMPCKTLPCRTLFPQCAASSGPRQWLPSSLSNAGKRVRELRCEFEVNLNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LDCAEIM+IV+KKGSWYSYGD 
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQ 360

Query: 361 RLGQGRDKALQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           RLGQGRD+ALQY KDNPAL +EIEK +QT L SGTVQMGFQSI+KP PNQ EVLEEFE
Sbjct: 361 RLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 417

[Close]

BLAST of Sed0004900 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 606.3 bits (1562), Expect = 1.9e-173
Identity = 317/409 (77.51%), Postives = 347/409 (84.84%), Query Frame = 0


Query: 19  FPPCST---PFRSHKCL------PSSLSNAPKRLGKLRCEFDVNGNGALSGDFDPRSVDR 78
           F PCS+     R   C       P ++  A K   K+  EFD   NGALS D D R +DR
Sbjct: 24  FTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDR 83

Query: 79  KKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGP 138
           +KALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GP
Sbjct: 84  QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGP 143

Query: 139 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALE 198
           ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE
Sbjct: 144 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALE 203

Query: 199 IADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 258
            ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC
Sbjct: 204 TADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 263

Query: 259 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVR 318
           TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIRS GK+KS+KGDE+IG+R RVR
Sbjct: 264 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVR 323

Query: 319 VQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSYGDHRLGQGRDKA 378
           VQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAEIM++V+KKGSWYSY D RLGQGR+KA
Sbjct: 324 VQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKA 383

Query: 379 LQYLKDNPALPEEIEKAMQTKLMSGTVQMGFQSIKKPSPNQEEVLEEFE 419
           LQ+L++NPAL +EIEK ++  ++ G V      +   S +     EE E
Sbjct: 384 LQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHREEEEE 432

[Close]

BLAST of Sed0004900 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 491.9 bits (1265), Expect = 5.1e-139
Identity = 260/314 (82.80%), Postives = 275/314 (87.58%), Query Frame = 0


Query: 19  FPPCST---PFRSHKCL------PSSLSNAPKRLGKLRCEFDVNGNGALSGDFDPRSVDR 78
           F PCS+     R   C       P ++  A K   K+  EFD   NGALS D D R +DR
Sbjct: 24  FTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDR 83

Query: 79  KKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGP 138
           +KALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GP
Sbjct: 84  QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGP 143

Query: 139 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALE 198
           ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE
Sbjct: 144 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALE 203

Query: 199 IADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 258
            ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC
Sbjct: 204 TADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 263

Query: 259 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVR 318
           TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIRS GK+KS+KGDE+IG+R RVR
Sbjct: 264 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVR 323

Query: 319 VQKSKVSRPYKQAE 324
           VQKSKVSRPYKQ E
Sbjct: 324 VQKSKVSRPYKQEE 337

[Close]

BLAST of Sed0004900 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 298.5 bits (763), Expect = 8.3e-81
Identity = 164/346 (47.40%), Postives = 234/346 (67.63%), Query Frame = 0


Query: 53  NGNGALSGDFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSA-GGALVETFPSGCLTLD 112
           +GNG+       + +    AL+ A++ I SSFGKGS+  LG A     V  F +G   LD
Sbjct: 46  DGNGSSEEGMSKKEI----ALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALD 105

Query: 113 CALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVG 172
            ALG GGLPKGR+VEI+GPE+SGKTTLALH IAE QK GG  + VDAEHA D + +KA+G
Sbjct: 106 VALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIG 165

Query: 173 VDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQA 232
           V+ ENL++ QPD GE AL + D + RSG+VD+I VDSV+AL P+ E+EGE+G   M +QA
Sbjct: 166 VNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQA 225

Query: 233 RLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASLRLEI 292
           RLMSQALRK+S + S +   LIF+NQ+R K+  +  +G P EVT GG ALKF+AS+RL I
Sbjct: 226 RLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI 285

Query: 293 RSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDI 352
           + IG +K  KG+E  G +V V++ K+K++ P++ A+FE+ FG+G+ K+  ++D +     
Sbjct: 286 KRIGLIK--KGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKF 345

Query: 353 VLKKGSWYSYGDHRLGQGRDKALQYLKDNPALPEEIEKAMQTKLMS 394
           + K G++Y+        G++   ++LK N +  EE+ K +Q KL++
Sbjct: 346 IAKNGTFYNLNGKNY-HGKEALKRFLKQNESDQEELMKKLQDKLIA 384

[Close]

BLAST of Sed0004900 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 205.3 bits (521), Expect = 9.6e-53
Identity = 125/334 (37.43%), Postives = 204/334 (61.08%), Query Frame = 0


Query: 63  DPRSVDRKKALEAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDCALG-GGLPK 122
           D +  ++  AL  A++ ++  F K S   L        V    +G L LD ALG GGLPK
Sbjct: 56  DRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115

Query: 123 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 182
           GR+VE++G E+SGKTTLALH I E QKLGG    +DAE+A DP+ ++++GV+ E L++ +
Sbjct: 116 GRMVEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISR 175

Query: 183 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 242
           P   E  L I D + +SG+VD+I VDSV+AL P+ E++  +G +    Q+R+M+QALRK+
Sbjct: 176 PSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKI 235

Query: 243 SGNASKAGCTLIFLNQIR--YKIGVYYGN-PEVTSGGIALKFFASLRLEIRSIGKLKSAK 302
             +   +   ++FLNQ+R   K  +++ +  EVT GG AL F A++RL++   G +K+A 
Sbjct: 236 HYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTA- 295

Query: 303 GDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDIVLKKGSWYSY 362
            ++  G+ V V+V K+K++   K++E  I FG G      VL+ A    ++L++G+ Y +
Sbjct: 296 -NKISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSY-F 355

Query: 363 GDHRLGQGRDKALQYLKDNPALPEEIEKAMQTKL 392
            +  + +G+D A +YL +N    + +   ++ +L
Sbjct: 356 IEGEVIEGKDAAEKYLVENKEALDTVVAILRNQL 386

[Close]

BLAST of Sed0004900 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 9.6e-45
Identity = 101/202 (50.00%), Postives = 138/202 (68.32%), Query Frame = 0


Query: 100 VETFPSGCLTLDCALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 159
           V  F +G   LD ALG GGLPKGR+VEI+GPE+SGKT LALH +        + +L+   
Sbjct: 12  VPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHML--------SMLLI--- 71

Query: 160 HAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIE 219
                + +KA+GV+ ENL++ QPD G+ AL + D + +SG+VD+I VDSV+AL P+ E++
Sbjct: 72  ----RSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELD 131

Query: 220 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 279
           GE+G   M +QARLMSQALRK S +   +   LIF+NQ+R + G   G  EVTSGG ALK
Sbjct: 132 GEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALK 191

Query: 280 FFASLRLEIRSIGKLKSAKGDE 301
           F+A +RL+I+ IG +K  KG+E
Sbjct: 192 FYAPMRLDIKRIGLIK--KGEE 193

The following BLAST results are available for this feature:

BLAST of Sed0004900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037524.1	5.2e-218	92.58	DNA repair protein recA-like 1, chloroplastic [Cucurbita argyrosperma subsp. arg...	[more]
XP_023524459.1	2.6e-217	92.11	DNA repair protein recA homolog 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022981737.1	2.6e-217	92.34	DNA repair protein recA homolog 1, chloroplastic [Cucurbita maxima]	[more]
XP_022940951.1	4.4e-217	92.11	DNA repair protein recA homolog 1, chloroplastic [Cucurbita moschata]	[more]
KAG6608007.1	4.4e-217	92.34	DNA repair protein recA-like 1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of Sed0004900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39199	2.6e-172	77.51	DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P48293	2.3e-115	59.64	Protein RecA OS=Arthrospira platensis OX=118562 GN=recA PE=3 SV=1	[more]
B7JZS9	7.3e-114	60.40	Protein RecA OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=recA PE=3 SV=1	[more]
Q8DH70	9.5e-114	61.85	Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=recA PE...	[more]
B1WW59	2.1e-113	61.82	Protein RecA OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=r...	[more]

BLAST of Sed0004900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUU1	1.2e-217	92.34	DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FJT7	2.1e-217	92.11	DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1C5R2	1.8e-216	90.91	DNA repair protein recA homolog 1, chloroplastic OS=Momordica charantia OX=3673 ...	[more]
A0A1S3BAR5	3.5e-212	90.67	DNA repair protein recA homolog 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
A0A0A0LBT0	5.1e-211	90.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G524580 PE=3 SV=1	[more]

BLAST of Sed0004900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79050.1	1.9e-173	77.51	recA DNA recombination family protein	[more]
AT1G79050.2	5.1e-139	82.80	recA DNA recombination family protein	[more]
AT2G19490.1	8.3e-81	47.40	recA DNA recombination family protein	[more]
AT3G10140.1	9.6e-53	37.43	RECA homolog 3	[more]
AT3G32920.1	9.6e-45	50.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 308..337 score: 49.4 coord: 156..185 score: 60.11 coord: 190..219 score: 66.32 coord: 228..257 score: 62.1 coord: 273..301 score: 47.22
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 71..333 e-value: 2.1E-117 score: 391.3
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 68..362 e-value: 3.3E-133 score: 441.9
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 66..362
IPR013765	DNA recombination and repair protein RecA	CDD	cd00983	recA	coord: 68..361 e-value: 8.13048E-174 score: 484.818
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 120..291 e-value: 8.2E-10 score: 48.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 98..363 e-value: 2.2E-100 score: 337.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 69..332
None	No IPR available	PANTHER	PTHR45900:SF1	MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG	coord: 66..362
IPR020584	DNA recombination/repair protein RecA, conserved site	PROSITE	PS00321	RECA_1	coord: 276..284
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 262..337 score: 28.13595
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 99..257 score: 28.456177
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 333..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004900.1	Sed0004900.1	mRNA
Sed0004900.2	Sed0004900.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding