Sed0004857 (gene) Chayote v1

Overview


Name	Sed0004857
Type	gene
Organism	Sechium edule (Chayote v1)
Description	sec-independent protein translocase protein TATC, chloroplastic
Location	LG07: 36829242 .. 36833038 (+)
RNA-Seq Expression	Sed0004857
Synteny	Sed0004857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCATTAGCGGTGCCCTAACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAAAACCTCTCAGCTTGCTTCTGCTCGAATTACCCCATCGTCGAGAAGGTCGACGTTGCGATTCTCCGGTTTGCTGGGCCGCCGGAGCTTTGATAGATTTGTGTGTTCTGCTGTTGACGACGACGTGAGACAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCCCGACCGTCGTCGACGATGAGCGAGGTATTAGTATTGCCAAAACCCTGGTTTGATTTCTAGGTTTTTTCATCTGAAAATCGTGCTTGTTTATGATTGCAAGTCGGAAATAGTGGAGACCTCGTAGCAGTATATAAAAGATGGACTACTCTTCTCCTTTCCAGTTGTTTTTCACATGGATGTCTACACTATTTAATATGTTATTAGTGCCCATAAACAGGTATTCGGTCCATAGTATCTAAACCTAAACATTGGAAAGAGTGGGTATCACATAAAAAGGTGGACTAATCGGTTGGTTTTAACTGGGATGTCTACACTATTTAATAAGTTGAGTAGAGACCATTATATTTAGTTCCATAAAAATGAAATTGAAATCAGATTTAATATTGGTGAGTTTAAAGAGTCATCGTATTGAGAGGAGCGATGTGAAATCCTAACATGTCCCCTCGAGATGGTGTCTCTTTTGGGCTCACCAATCTTTTTATTGGACCGATACCCTTTTGGGTTTTATGGGCTCCGATAGACCGATTCTATATTAGATAACATAGGGTTCCACCTCAAAACCAATTGGCTTTGAGGGGAGTAACTCATATCTCTTATAAAGAGTCGTTTGACTTTCCACTTTTCCAACGTGGAACAATTGTGAGATCCTAACATGATCCCACGTTGGAAAGAATATATTACTCATTTTATCACTAATTGATTTTAAGATGGAGGTCTACACTCTTTAATGAATAGTTTATAGCTTGGAAGGTCTAACAAATTACTTTTTAGTTTAGCTGTTATGGCATAGTTAAACTGTTTATTGCTTTATTATACCCGTATTAGTAATTGGATTATGTAGTATTGTTTCTTAATTTTGTTTAGAACTTGCTTATGTAATAGGATTGGTTGAAGAAATTACGTGTTTCTTAGTTGAGCTTATATGAGTTCAGGATTTGAAGGGGACAGTCATAAGTGGATTTATTTGGATCCTGAAATTCTGGTTAAAACTTATTGGAACTTTACAAGCTTTCAGATACTATTTTTTAGGAATATGCAATGTTTTAAAAAGTCCAAGGTGTATTAAGGTGCAATGGCCCTCTGGAGTTTGAGGCGTGGGCTTGTTCACTTAAGATGCACTATATAAAAAGAAAAAATACAAAAAAAAAATTATATATGTATCTATGTATACACAATAAAAATTCTTTCGTGGACATAAATGAAGTTTTAATCAAGAATAATATAGAAAACATATATAACATTCAACTCTCAACCTAAATGAAGTTTAACTAAGAATAATATATAAAATATACACAACATTCAACCATTAATTTTTCATATTTTGAATAAGTTATCTCGCACTTCGAATGACTTAGTACGGGGATCTCGCCAAATATCAAAAGCGTGTGCCTTAGTAACTATTAAGCGCCAAAAGGTGCCAGCCTTGGGCCTAAGGAACATGCTTTCAAATACTTCACTTCTACTTACATGTTCATTGCATATCTTGACTCCTGTCTGTTAAATTATGTGGCTGCAGAAAGTTGATGTTATAATTGGTATACTATTTTCTAACATCCAATTCTTTCATGAAAAACTAATAGATATCCCCGAGAACTCAACATATGGGGCTCCGGAAAAAAGTGATATATACAACTTTCTTTATCCCGATCAAGACCTACTTCCAGATGATAAGGAAATGAGTGTGTTTGATCATCTTGAAGAACTTCGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTTGTCTTGATTCTTGAAGCTCCGGTTAAGGAACAAGGTGTTAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTCACAACATTGAAGGTTAGAATTTTGTTTGACGTAATATAATTACATCCTTAGTATAATCAAATCACTTCATTCTTTTTGGATTTGTGAGCATGGTTGCCATATATTTGGATAGCTATTGATACGAAATGGGCTATTATGAGATCAAATTTGACTTTAACCAACTTGGCCTTTAACTTGGGTTAATAGGTTGAATTCCAATTAGTGGTTAAACTTTATCATAGTCTAACAGTTCAACCTGTTGGTTTAATGATGGTTTAACATGAAATTAGTGCAACAGATCCTTGGATGAAATCTTTGCAACGTTACTAATATTGAATACAATGCGTATCAGCTCTACGTTAATTGTAACTTTCTCAGACATAATCGGCTTCACAGTTGTATGGTGATGGAGAATTACTACAAAATTATACTTCCTATGCGCTGCAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTATCATCCTCTATGAGATTATTGCCTTTGTCATTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCAATCGTCCTAGGCTCCTCTATACTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCGGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCCTGTGGTCCATTGATCAATACTTCGAATTCGTACTTGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTTTTTTCTTCACAATTGAATTGCATTGTTATCTGTAGGAATATGGTTCATACACTAAAATACTAATTCCTACCAATTCCTTAAGCCTTTTTGTGATTTTTCTTCTTGGAAGCCGTTTTTATAGAATCTTTCCATCTTTTTGGACTTTTATTTTGTATGCCCATGCATTCTTGAAATGTTGTGTTTTATTAAAAAAAAAACCCAACAAATTCCCTCTTCAAAATATTATCTCTAGCCTGGTTGTTGAAAGGATTTTGGAGACCTAAAAGATCATGGGTTCAATAGGGTGACTATCTATTTAGAAATTAATTTTCTATGAATTTTTTTGACATCCAAATATTATTATAGGGTTAAATGGTATATTCAAATATTCATGAATACCTTAAGGAGGGGGTGTTTGGATGAGTAGTTACGTGAAAAGTTATTTTGAGTGATTATGACGAAGAGTTATTTTGAATGATTAGAATGAAGAGTTATTTTTAGTGATTAGAAATTGGGGTTGTTTGTATTAGTAGCTCATTTGAATGTGGATTTTGTTGAGGAGTTGTAGGTAATAGCTCGTTTGGAGAGTTGCAGAAATGAGTAGTTATTTTGAATGGTTATTAGAAATAAGTTATGAGAAATGAGTAGTCATTTTGAGTGGTTGCCATAATTCGTTTAGATGTTTTTTTTAGGAGTCGTAACTACTCATCTGTAACTCTTTTGTAAAACCAAAAATCAAACACCCCTAGAAACCAAATTTTACTAATTGGACTAAATTTTTGTGCATGATTGTATTATCAGGTTCCAGTCATACAGGTATTGCTGGGACAACTAGGGCTGGTTTCAGGAGACCAAATGCTTTCGATTTGGAGATACGTAGTGGTTGGTGCAGTGGTGGCTGCTGCTGTACTTACACCTTCTACAGATCCATTAACTCAGGTGCTTCTGGCAGCCCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGTTGGTCAAGCTCTCAGGCCGATAG

mRNA sequence

ATGGCGAGCATTAGCGGTGCCCTAACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAAAACCTCTCAGCTTGCTTCTGCTCGAATTACCCCATCGTCGAGAAGGTCGACGTTGCGATTCTCCGGTTTGCTGGGCCGCCGGAGCTTTGATAGATTTGTGTGTTCTGCTGTTGACGACGACGTGAGACAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCCCGACCGTCGTCGACGATGAGCGAGATATCCCCGAGAACTCAACATATGGGGCTCCGGAAAAAAGTGATATATACAACTTTCTTTATCCCGATCAAGACCTACTTCCAGATGATAAGGAAATGAGTGTGTTTGATCATCTTGAAGAACTTCGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTTGTCTTGATTCTTGAAGCTCCGGTTAAGGAACAAGGTGTTAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTCACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTATCATCCTCTATGAGATTATTGCCTTTGTCATTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCAATCGTCCTAGGCTCCTCTATACTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCGGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCCTGTGGTCCATTGATCAATACTTCGAATTCGTACTTGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTCATACAGGTATTGCTGGGACAACTAGGGCTGGTTTCAGGAGACCAAATGCTTTCGATTTGGAGATACGTAGTGGTTGGTGCAGTGGTGGCTGCTGCTGTACTTACACCTTCTACAGATCCATTAACTCAGGTGCTTCTGGCAGCCCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGTTGGTCAAGCTCTCAGGCCGATAG

Coding sequence (CDS)

ATGGCGAGCATTAGCGGTGCCCTAACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAAAACCTCTCAGCTTGCTTCTGCTCGAATTACCCCATCGTCGAGAAGGTCGACGTTGCGATTCTCCGGTTTGCTGGGCCGCCGGAGCTTTGATAGATTTGTGTGTTCTGCTGTTGACGACGACGTGAGACAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCCCGACCGTCGTCGACGATGAGCGAGATATCCCCGAGAACTCAACATATGGGGCTCCGGAAAAAAGTGATATATACAACTTTCTTTATCCCGATCAAGACCTACTTCCAGATGATAAGGAAATGAGTGTGTTTGATCATCTTGAAGAACTTCGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTTGTCTTGATTCTTGAAGCTCCGGTTAAGGAACAAGGTGTTAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTCACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTATCATCCTCTATGAGATTATTGCCTTTGTCATTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCAATCGTCCTAGGCTCCTCTATACTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCGGCGGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCCTGTGGTCCATTGATCAATACTTCGAATTCGTACTTGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTCATACAGGTATTGCTGGGACAACTAGGGCTGGTTTCAGGAGACCAAATGCTTTCGATTTGGAGATACGTAGTGGTTGGTGCAGTGGTGGCTGCTGCTGTACTTACACCTTCTACAGATCCATTAACTCAGGTGCTTCTGGCAGCCCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGTTGGTCAAGCTCTCAGGCCGATAG

Protein sequence

MASISGALTSHLQLSHCRFSAKTSQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSAVDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR

Homology

[Close]

BLAST of Sed0004857 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.4 bits (1544), Expect = 2.0e-167
Identity = 316/347 (91.07%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA+T  SQLASARI P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQT+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 599.4 bits (1544), Expect = 2.0e-167
Identity = 316/347 (91.07%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA+T  SQLASARI P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 39  MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 98

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQT+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMSV
Sbjct: 99  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 158

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 159 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 218

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 219 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 278

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 279 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 338

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 339 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

[Close]

BLAST of Sed0004857 vs. NCBI nr
Match: XP_022150565.1 (sec-independent protein translocase protein TATC, chloroplastic [Momordica charantia])

HSP 1 Score: 598.6 bits (1542), Expect = 3.4e-167
Identity = 311/345 (90.14%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKTSQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSAVD 60
           M SISGALTSHLQL+HC FSA+TSQLASARI+P+SRRS LRFSGLL RR+F+RFVCSAVD
Sbjct: 1   MGSISGALTSHLQLNHCHFSARTSQLASARISPTSRRSKLRFSGLLSRRNFNRFVCSAVD 60

Query: 61  DDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSVFD 120
           DDV +KQTELGGGNG T+V+D  DI +NST  APEK DIYNFLYP ++LLPDDKEMSVFD
Sbjct: 61  DDVIEKQTELGGGNGSTIVEDGPDIAQNSTDEAPEKGDIYNFLYPSKELLPDDKEMSVFD 120

Query: 121 HLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKV 180
           HLEELRQRIFVSVLAVG AIVGCFAFSKEL+LILEAPVKEQGVRFLQLAPGEFFFTT+KV
Sbjct: 121 HLEELRQRIFVSVLAVGGAIVGCFAFSKELILILEAPVKEQGVRFLQLAPGEFFFTTVKV 180

Query: 181 SGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240
           SGYCGLLLGSP+ILYEIIAFV+PGLT+AERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL
Sbjct: 181 SGYCGLLLGSPVILYEIIAFVLPGLTKAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240

Query: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 300
           NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSIWR
Sbjct: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 300

Query: 301 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           YVVVGAVVAAA+LTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 YVVVGAVVAAAILTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 345

[Close]

BLAST of Sed0004857 vs. NCBI nr
Match: XP_022982565.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 598.6 bits (1542), Expect = 3.4e-167
Identity = 316/347 (91.07%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA T  SQLASARI+P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQT+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. NCBI nr
Match: XP_023539458.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 594.3 bits (1531), Expect = 6.5e-166
Identity = 316/348 (90.80%), Postives = 332/348 (95.40%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA+T  SQLASARI P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQ-TELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMS 120
           VDDDVR+KQ T+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMS
Sbjct: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348

[Close]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-125
Identity = 234/310 (75.48%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 49  RSFDRFVCSAVDDDVRQKQTELGGGNGPTVVDDERDIPENSTY-------------GAPE 108
           +SFDR VC AVDD++R+KQ +    +   +     + PEN                   E
Sbjct: 44  KSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENFKEDGE 103

Query: 109 KSDIYNFLYPDQDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILE 168
           +S IY+FLYP ++LLPDDKEMS+FDHLEELR+RIF+SVL VG +I+GCFAFSK+LV ILE
Sbjct: 104 RSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILE 163

Query: 169 APVKEQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGP 228
           APVK +GVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAF+IPGLT+ ER+FLGP
Sbjct: 164 APVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGP 223

Query: 229 IVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 288
           IVLGSS+LFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFSTGLSF
Sbjct: 224 IVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 283

Query: 289 QVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLG 346
           QVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLLGLYLG
Sbjct: 284 QVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLG 343

[Close]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 438.7 bits (1127), Expect = 6.0e-122
Identity = 245/345 (71.01%), Postives = 278/345 (80.58%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSAKTSQLASARIT--PSSRRSTLRFSGLLGRRSFDRFVCSAVD 62
           S S AL  H +L+     + T Q     +T   S R + LR+S +  RRS      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSVFD 122
           DD     TE   G G  V D   D  E+        S +Y FLYP ++ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+L++ LEAPVK QGVRFLQLAPGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 5.1e-121
Identity = 233/302 (77.15%), Postives = 260/302 (86.09%), Query Frame = 0


Query: 56  CSAVDDD--------VRQKQTELGGGNGPTVVDDERDIP-ENSTYGAP---EKSDIYNFL 115
           C+AVD D        + QK++    G G  + D     P EN ++G P   E+S +Y FL
Sbjct: 56  CAAVDGDGALRESGPLPQKESP-SSGIGAALEDPPPGPPVENGSFGGPSQEEQSALYTFL 115

Query: 116 YPDQDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGV 175
           YP +DLLPDDKEMS+FDHLEELR RIF+SVLAVGAAI+GCFAFSK+LV+ LEAPV  QGV
Sbjct: 116 YPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEAPVTAQGV 175

Query: 176 RFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSIL 235
           RFLQL+PGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTR ER+FLGPIVLGSS+L
Sbjct: 176 RFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPIVLGSSVL 235

Query: 236 FYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVL 295
           FY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLSFQVPVIQ+L
Sbjct: 236 FYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLL 295

Query: 296 LGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLS 346
           LGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VK++
Sbjct: 296 LGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKIT 355

[Close]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.6e-119
Identity = 222/285 (77.89%), Postives = 250/285 (87.72%), Query Frame = 0


Query: 65  QKQTELGGGNGPTVVDDERDIPENSTYGA----PEKSDIYNFLYPDQDLLPDDKEMSVFD 124
           Q++    G  G  + D      +N ++G      E+S +YNFLYP ++LLPDDKEMS+FD
Sbjct: 75  QREESPSGSLGAALEDPSPQPVQNGSFGGITEDEEQSSLYNFLYPSKELLPDDKEMSIFD 134

Query: 125 HLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKV 184
           HLEELR RIFVSVLAVGAAI+GCFA+SK+L+ ILEAPV  QGVRFLQL+PGEFFFTTLKV
Sbjct: 135 HLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKV 194

Query: 185 SGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 244
           SGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FLGPIVLGSS+LFY GI FSY VL PAAL
Sbjct: 195 SGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLAPAAL 254

Query: 245 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 304
           NFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSFQVPVIQ+LLGQ+GLVS DQMLSIWR
Sbjct: 255 NFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGLVSSDQMLSIWR 314

Query: 305 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           YVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 315 YVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLTGR 359

[Close]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.3e-78
Identity = 151/238 (63.45%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 108 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQ 167
           D +PDD EMS+FDHL+ELR RIF+S+ AV   +V CF F K LV  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 168 LAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAG 227
           L+PGEFFF ++KV+GY G+L+ SP ILY+II FV+PGLTR ERR LGP+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 228 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQL 287
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQV+LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 288 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of Sed0004857 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.8e-168
Identity = 316/347 (91.07%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA+T  SQLASARI P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQT+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.7e-167
Identity = 316/347 (91.07%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISGALTSHLQLSHCRFSA T  SQLASARI+P+SRRS LRFS LL RR+F+RFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQT+LGGGN  TVV+D  DI E+ST GAPEKSD+YNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKELVLILEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. ExPASy TrEMBL
Match: A0A6J1D8U0 (sec-independent protein translocase protein TATC, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018674 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.7e-167
Identity = 311/345 (90.14%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKTSQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSAVD 60
           M SISGALTSHLQL+HC FSA+TSQLASARI+P+SRRS LRFSGLL RR+F+RFVCSAVD
Sbjct: 1   MGSISGALTSHLQLNHCHFSARTSQLASARISPTSRRSKLRFSGLLSRRNFNRFVCSAVD 60

Query: 61  DDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSVFD 120
           DDV +KQTELGGGNG T+V+D  DI +NST  APEK DIYNFLYP ++LLPDDKEMSVFD
Sbjct: 61  DDVIEKQTELGGGNGSTIVEDGPDIAQNSTDEAPEKGDIYNFLYPSKELLPDDKEMSVFD 120

Query: 121 HLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKV 180
           HLEELRQRIFVSVLAVG AIVGCFAFSKEL+LILEAPVKEQGVRFLQLAPGEFFFTT+KV
Sbjct: 121 HLEELRQRIFVSVLAVGGAIVGCFAFSKELILILEAPVKEQGVRFLQLAPGEFFFTTVKV 180

Query: 181 SGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240
           SGYCGLLLGSP+ILYEIIAFV+PGLT+AERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL
Sbjct: 181 SGYCGLLLGSPVILYEIIAFVLPGLTKAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240

Query: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 300
           NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSIWR
Sbjct: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 300

Query: 301 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           YVVVGAVVAAA+LTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 YVVVGAVVAAAILTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 345

[Close]

BLAST of Sed0004857 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 8.6e-164
Identity = 306/347 (88.18%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISG+L+SHLQLSHCRFSA+T  SQL S RI+P+ RR+ LR +G L RR+F+RFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQTELGGGNG TVV+D  DI +NST GAP+KSDIYNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL PIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 8.6e-164
Identity = 306/347 (88.18%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MASISGALTSHLQLSHCRFSAKT--SQLASARITPSSRRSTLRFSGLLGRRSFDRFVCSA 60
           M SISG+L+SHLQLSHCRFSA+T  SQL S RI+P+ RR+ LR +G L RR+F+RFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSV 120
           VDDDVR+KQTELGGGNG TVV+D  DI +NST GAP+KSDIYNFLYP +DLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL PIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAW+VKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Sed0004857 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 438.7 bits (1127), Expect = 4.2e-123
Identity = 245/345 (71.01%), Postives = 278/345 (80.58%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSAKTSQLASARIT--PSSRRSTLRFSGLLGRRSFDRFVCSAVD 62
           S S AL  H +L+     + T Q     +T   S R + LR+S +  RRS      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVRQKQTELGGGNGPTVVDDERDIPENSTYGAPEKSDIYNFLYPDQDLLPDDKEMSVFD 122
           DD     TE   G G  V D   D  E+        S +Y FLYP ++ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIVGCFAFSKELVLILEAPVKEQGVRFLQLAPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+L++ LEAPVK QGVRFLQLAPGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPIILYEIIAFVIPGLTRAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSP+ILYEIIAFV+PGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWLVKLSGR 346
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

The following BLAST results are available for this feature:

BLAST of Sed0004857 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956650.1	2.0e-167	91.07	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
KAG6601263.1	2.0e-167	91.07	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]
XP_022150565.1	3.4e-167	90.14	sec-independent protein translocase protein TATC, chloroplastic [Momordica chara...	[more]
XP_022982565.1	3.4e-167	91.07	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxim...	[more]
XP_023539458.1	6.5e-166	90.80	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo ...	[more]

BLAST of Sed0004857 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	1.2e-125	75.48	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
Q9SJV5	6.0e-122	71.01	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
C4IZX0	5.1e-121	77.15	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9AVE6	3.6e-119	77.89	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
P54086	5.3e-78	63.45	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Sed0004857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYD1	9.8e-168	91.07	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	1.7e-167	91.07	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]
A0A6J1D8U0	1.7e-167	90.14	sec-independent protein translocase protein TATC, chloroplastic OS=Momordica cha...	[more]
A0A5A7SVD3	8.6e-164	88.18	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	8.6e-164	88.18	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]

BLAST of Sed0004857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	4.2e-123	71.01	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 117..144 score: 38.81 coord: 191..209 score: 53.23 coord: 209..235 score: 44.16 coord: 260..288 score: 45.61
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 120..328 e-value: 6.2E-61 score: 205.8
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 119..333 e-value: 1.3E-80 score: 268.4
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 48..345
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 113..345 score: 16.508993
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85
None	No IPR available	PANTHER	PTHR30371:SF6	SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED	coord: 48..345
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 260..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004857.1	Sed0004857.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity