Sed0004826 (gene) Chayote v1

Overview


Name	Sed0004826
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CCHC-type domain-containing protein
Location	LG11: 25694800 .. 25695818 (+)
RNA-Seq Expression	Sed0004826
Synteny	Sed0004826

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCAGCACAGTTCGCTCAAATGATGGAAAAGCTAGACCTTGATGATCAAAAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGCAGCTTATGAAAGTGAACTTGAAGGGGTGCTGACGTGCAAAATTCTCTCTAGCAATCAGATTAGCTCAGATGTGTTCAAGAAGGTTGTCCCAAAAATCTGGAATCTGGAAAATAAAGTGAGTATAGAAGCGGTATGTGTAAACACTTTTATCTGTTCATTCGAAAACAAAGTGTTCAGGGACAGAGTCCTAATGGCGAGCCGTGGATCTATGACGACGCGGTGATATTGTTCGAGGCAATGGCAGGGGACAAGCGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTTTGTCAGACTTCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGGAGTATGTTAGGGAAGTTCTTAGGATGGGATGGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATTGATGTTCGTAGACCGTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGCGATGGGGGCTGAGAAATGGGTAAGATTATCTTATGAAAAACTTCTGCTCTTCTGTCGCGGATGTGGAAGATTAGGCCACATGACCTCTGATTGTAGCTTCGTTGCAATTGGAGAGGGTATTCCTTTCCCTTTTGGGGAAGATCTGAGAGAACCATATCGTTTTTCTAGGGGAGAATCAGGGTCGCCGAGTAGATTGGCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGTGAGGATGGTGGTCATTTTGAGAAAGGAGACGAGCCGAAAACGCTCGAAGGGGGGAGAAGAGAGGAGGCTAGGGGGATTTCGATTTTTCCGACGAAGGGGCGACACCTTTTTGCGAGTAACGGGTCGCCGGAGACGGCCTTGGGAGAAGGTGAGGGAAAGGAGGAAGGTCGTCAGGAATTGCAGGAGGTTGTCTAA

mRNA sequence

ATGGACCCAGCACAGTTCGCTCAAATGATGGAAAAGCTAGACCTTGATGATCAAAAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGCAGCTTATGAAAGTGAACTTGAAGGGGTGCTGACGTGCAAAATTCTCTCTAGCAATCAGATTAGCTCAGATGTGTTCAAGAAGGGACAGAGTCCTAATGGCGAGCCGTGGATCTATGACGACGCGGTGATATTGTTCGAGGCAATGGCAGGGGACAAGCGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTTTGTCAGACTTCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGGAGTATGTTAGGGAAGTTCTTAGGATGGGATGGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATTGATGTTCGTAGACCGTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGCGATGGGGGCTGAGAAATGGGTAAGATTATCTTATGAAAAACTTCTGCTCTTCTGTCGCGGATGTGGAAGATTAGGCCACATGACCTCTGATTGTAGCTTCGTTGCAATTGGAGAGGGTATTCCTTTCCCTTTTGGGGAAGATCTGAGAGAACCATATCGTTTTTCTAGGGGAGAATCAGGGTCGCCGAGTAGATTGGCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGTGAGGATGGTGGTCATTTTGAGAAAGGAGACGAGCCGAAAACGCTCGAAGGGGGGAGAAGAGAGGAGGCTAGGGGGATTTCGATTTTTCCGACGAAGGGGCGACACCTTTTTGCGAGTAACGGGTCGCCGGAGACGGCCTTGGGAGAAGGTGAGGGAAAGGAGGAAGGTCGTCAGGAATTGCAGGAGGTTGTCTAA

Coding sequence (CDS)

ATGGACCCAGCACAGTTCGCTCAAATGATGGAAAAGCTAGACCTTGATGATCAAAAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGCAGCTTATGAAAGTGAACTTGAAGGGGTGCTGACGTGCAAAATTCTCTCTAGCAATCAGATTAGCTCAGATGTGTTCAAGAAGGGACAGAGTCCTAATGGCGAGCCGTGGATCTATGACGACGCGGTGATATTGTTCGAGGCAATGGCAGGGGACAAGCGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTTTGTCAGACTTCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGGAGTATGTTAGGGAAGTTCTTAGGATGGGATGGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATTGATGTTCGTAGACCGTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGCGATGGGGGCTGAGAAATGGGTAAGATTATCTTATGAAAAACTTCTGCTCTTCTGTCGCGGATGTGGAAGATTAGGCCACATGACCTCTGATTGTAGCTTCGTTGCAATTGGAGAGGGTATTCCTTTCCCTTTTGGGGAAGATCTGAGAGAACCATATCGTTTTTCTAGGGGAGAATCAGGGTCGCCGAGTAGATTGGCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGTGAGGATGGTGGTCATTTTGAGAAAGGAGACGAGCCGAAAACGCTCGAAGGGGGGAGAAGAGAGGAGGCTAGGGGGATTTCGATTTTTCCGACGAAGGGGCGACACCTTTTTGCGAGTAACGGGTCGCCGGAGACGGCCTTGGGAGAAGGTGAGGGAAAGGAGGAAGGTCGTCAGGAATTGCAGGAGGTTGTCTAA

Protein sequence

MDPAQFAQMMEKLDLDDQKAQEIFELEEEDVAAYESELEGVLTCKILSSNQISSDVFKKGQSPNGEPWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGWDGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLGHMTSDCSFVAIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRGRGRGRGRGEVSRSEDGGHFEKGDEPKTLEGGRREEARGISIFPTKGRHLFASNGSPETALGEGEGKEEGRQELQEVV

Homology

[Close]

BLAST of Sed0004826 vs. NCBI nr
Match: TXG60912.1 (hypothetical protein EZV62_012275 [Acer yangbiense])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-21
Identity = 86/264 (32.58%), Postives = 129/264 (48.86%), Query Frame = 0


Query: 52  ISSDVFKKGQSPNGEPWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGN 111
           +S +V  K +  +G PW ++DA+I+ E   G   V+ M+F   +F++++H+VP  C T +
Sbjct: 39  MSLNVDDKRKIISGGPWSFNDALIVMEDPGGKGDVNRMKFNKAEFWIQIHNVPMICMTED 98

Query: 112 NARKLGSMLGKFLGWDGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLS 171
             R LGS++G     DG     N  KFLR+++ IDV  PLRR L++ +   G E  + L 
Sbjct: 99  TTRFLGSIIGYVQEIDGGDTGSNMVKFLRVRVKIDVDIPLRRCLRVDTMGDGVESVMLLK 158

Query: 172 YEKLLLFCRGCGRLGHMTSDC-----SFVAIGEGIPFPFGEDLREPYRFSRGESGSPSRL 231
           YE+L  FC  CG LGH   DC       VAIGE   F +G  +R P  F R  +G   R 
Sbjct: 159 YERLPDFCFRCGHLGHSCRDCPDKLTGDVAIGE--EFLYGPWMRAPTPFKR--NGGWGR- 218

Query: 232 AGRGRGRGRGRGEVSRSEDGGHFEKGDEPKTLEGGRREEARGISIFPTKGRH----LFAS 291
               R   RG GE  R +   H  +G +   +  G+     G  +   +G +    L ++
Sbjct: 219 ----RWELRGGGETVRFQSRDHEIRGGQNNAVTSGKGGHLPGTRMMEDRGLYRTPVLESN 278

Query: 292 NGSPETALGEGEGKEEGRQELQEV 307
               E A+   EG   G  +  +V
Sbjct: 279 KIGKEIAIDPMEGNRAGSADKTDV 293

[Close]

BLAST of Sed0004826 vs. NCBI nr
Match: VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-19
Identity = 64/183 (34.97%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + DF++++H+VP +C + N  R++G+  G+ L  
Sbjct: 97  PWNFDKALVLLETPDGSIAPSKMLLKYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDV 156

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D +  G+FLRL++++DV +PLRR  K+   + G   +V   YE+L  FC  CGRLG
Sbjct: 157 IEGMDGKCLGRFLRLRVSVDVSKPLRRGKKMTLPS-GNTVFVEFRYERLPEFCFCCGRLG 216

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRG-RGRGRGRGEVSRS 246
           H+  +CSFV  A  +    P+G  L+    F    +G+P R  G G    G G  E    
Sbjct: 217 HVFKECSFVDQAAKQADEKPYGSWLKATKDFHSIRAGNPKRTNGSGSEAEGDGAKEKEME 276

[Close]

BLAST of Sed0004826 vs. NCBI nr
Match: XP_021726128.1 (uncharacterized protein LOC110693273 [Chenopodium quinoa])

HSP 1 Score: 105.9 bits (263), Expect = 6.2e-19
Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 37  ELEGVLTCKILSSN----QISSDVFKKGQSPNGEPWIYDDAVILFEAMAGDKRVSEMEFA 96
           +L   +  K++ SN    Q  +DV K+ +  +G PW +D  ++L + + G+++ SE+ F 
Sbjct: 66  KLHNNVVIKMVESNLFVFQFFNDVDKE-KLIDGSPWFFDGKLLLLKDIDGEEQPSEVVFQ 125

Query: 97  FGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGWDGDGDKRNRGKFLRLKIAIDVRRPLR 156
           +   +VRL DVP +     N  ++G  LG FL  D + +    G+F+R+K+ ID+ RPLR
Sbjct: 126 YVPMWVRLLDVPFSKRNRRNLTEIGDFLGIFLEID-ETEPLGIGEFMRMKVMIDIDRPLR 185

Query: 157 RALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLGHMTSDCSF 195
           R L L  GA  A KW+ L YE+L  FC  CGRL H    CSF
Sbjct: 186 RGLFLVVGA-SASKWISLKYERLEDFCFFCGRLDHTEGTCSF 224

[Close]

BLAST of Sed0004826 vs. NCBI nr
Match: CAB4262995.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 103.2 bits (256), Expect = 4.0e-18
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + D ++++H+VP +  + N  R++G+  G+ L  
Sbjct: 39  PWNFDKALVLLETPDGSIAPSKMLLKYADLWIQVHNVPLSYMSTNIGRQIGNSFGRCLDV 98

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D    G+FLR+++ +DV +PLRR  K+     G   +V   YE+L  FC  CGR+G
Sbjct: 99  MEGMDGECLGRFLRIRVRVDVSKPLRRGKKMLL-PYGNTVFVEFRYERLPEFCFCCGRVG 158

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRGRGRGRGRGEVSRSE 246
           H+  +CSFV     +    P+G  L+    F    +GSP R  G G G  + RG     E
Sbjct: 159 HVFKECSFVDQVAKQAREKPYGIWLKATKDFHPIRAGSPKRNRGSGMGTNKTRGLAEDGE 218

Query: 247 DGGHFE 251
            G H E
Sbjct: 219 SGAHGE 223

[Close]

BLAST of Sed0004826 vs. NCBI nr
Match: CAB4262994.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 103.2 bits (256), Expect = 4.0e-18
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + D ++++H+VP +  + N  R++G+  G+ L  
Sbjct: 39  PWNFDKALVLLETPDGSIAPSKMLLKYADLWIQVHNVPLSYMSTNIGRQIGNSFGRCLDV 98

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D    G+FLR+++ +DV +PLRR  K+     G   +V   YE+L  FC  CGR+G
Sbjct: 99  MEGMDGECLGRFLRIRVRVDVSKPLRRGKKMLL-PYGNTVFVEFRYERLPEFCFCCGRVG 158

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRGRGRGRGRGEVSRSE 246
           H+  +CSFV     +    P+G  L+    F    +GSP R  G G G  + RG     E
Sbjct: 159 HVFKECSFVDQVAKQAREKPYGIWLKATKDFHPIRAGSPKRNRGSGMGTNKTRGLAEDGE 218

Query: 247 DGGHFE 251
            G H E
Sbjct: 219 SGAHGE 223

[Close]

BLAST of Sed0004826 vs. ExPASy TrEMBL
Match: A0A5C7HXM5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_012275 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.5e-22
Identity = 86/264 (32.58%), Postives = 129/264 (48.86%), Query Frame = 0


Query: 52  ISSDVFKKGQSPNGEPWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGN 111
           +S +V  K +  +G PW ++DA+I+ E   G   V+ M+F   +F++++H+VP  C T +
Sbjct: 39  MSLNVDDKRKIISGGPWSFNDALIVMEDPGGKGDVNRMKFNKAEFWIQIHNVPMICMTED 98

Query: 112 NARKLGSMLGKFLGWDGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLS 171
             R LGS++G     DG     N  KFLR+++ IDV  PLRR L++ +   G E  + L 
Sbjct: 99  TTRFLGSIIGYVQEIDGGDTGSNMVKFLRVRVKIDVDIPLRRCLRVDTMGDGVESVMLLK 158

Query: 172 YEKLLLFCRGCGRLGHMTSDC-----SFVAIGEGIPFPFGEDLREPYRFSRGESGSPSRL 231
           YE+L  FC  CG LGH   DC       VAIGE   F +G  +R P  F R  +G   R 
Sbjct: 159 YERLPDFCFRCGHLGHSCRDCPDKLTGDVAIGE--EFLYGPWMRAPTPFKR--NGGWGR- 218

Query: 232 AGRGRGRGRGRGEVSRSEDGGHFEKGDEPKTLEGGRREEARGISIFPTKGRH----LFAS 291
               R   RG GE  R +   H  +G +   +  G+     G  +   +G +    L ++
Sbjct: 219 ----RWELRGGGETVRFQSRDHEIRGGQNNAVTSGKGGHLPGTRMMEDRGLYRTPVLESN 278

Query: 292 NGSPETALGEGEGKEEGRQELQEV 307
               E A+   EG   G  +  +V
Sbjct: 279 KIGKEIAIDPMEGNRAGSADKTDV 293

[Close]

BLAST of Sed0004826 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19
Identity = 64/183 (34.97%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + DF++++H+VP +C + N  R++G+  G+ L  
Sbjct: 97  PWNFDKALVLLETPDGSIAPSKMLLKYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDV 156

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D +  G+FLRL++++DV +PLRR  K+   + G   +V   YE+L  FC  CGRLG
Sbjct: 157 IEGMDGKCLGRFLRLRVSVDVSKPLRRGKKMTLPS-GNTVFVEFRYERLPEFCFCCGRLG 216

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRG-RGRGRGRGEVSRS 246
           H+  +CSFV  A  +    P+G  L+    F    +G+P R  G G    G G  E    
Sbjct: 217 HVFKECSFVDQAAKQADEKPYGSWLKATKDFHSIRAGNPKRTNGSGSEAEGDGAKEKEME 276

[Close]

BLAST of Sed0004826 vs. ExPASy TrEMBL
Match: A0A6J5TJ60 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2531 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + D ++++H+VP +  + N  R++G+  G+ L  
Sbjct: 39  PWNFDKALVLLETPDGSIAPSKMLLKYADLWIQVHNVPLSYMSTNIGRQIGNSFGRCLDV 98

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D    G+FLR+++ +DV +PLRR  K+     G   +V   YE+L  FC  CGR+G
Sbjct: 99  MEGMDGECLGRFLRIRVRVDVSKPLRRGKKMLL-PYGNTVFVEFRYERLPEFCFCCGRVG 158

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRGRGRGRGRGEVSRSE 246
           H+  +CSFV     +    P+G  L+    F    +GSP R  G G G  + RG     E
Sbjct: 159 HVFKECSFVDQVAKQAREKPYGIWLKATKDFHPIRAGSPKRNRGSGMGTNKTRGLAEDGE 218

Query: 247 DGGHFE 251
            G H E
Sbjct: 219 SGAHGE 223

[Close]

BLAST of Sed0004826 vs. ExPASy TrEMBL
Match: A0A6J5TGK7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2532 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 67  PWIYDDAVILFEAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGW 126
           PW +D A++L E   G    S+M   + D ++++H+VP +  + N  R++G+  G+ L  
Sbjct: 39  PWNFDKALVLLETPDGSIAPSKMLLKYADLWIQVHNVPLSYMSTNIGRQIGNSFGRCLDV 98

Query: 127 DGDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLG 186
               D    G+FLR+++ +DV +PLRR  K+     G   +V   YE+L  FC  CGR+G
Sbjct: 99  MEGMDGECLGRFLRIRVRVDVSKPLRRGKKMLL-PYGNTVFVEFRYERLPEFCFCCGRVG 158

Query: 187 HMTSDCSFV--AIGEGIPFPFGEDLREPYRFSRGESGSPSRLAGRGRGRGRGRGEVSRSE 246
           H+  +CSFV     +    P+G  L+    F    +GSP R  G G G  + RG     E
Sbjct: 159 HVFKECSFVDQVAKQAREKPYGIWLKATKDFHPIRAGSPKRNRGSGMGTNKTRGLAEDGE 218

Query: 247 DGGHFE 251
            G H E
Sbjct: 219 SGAHGE 223

[Close]

BLAST of Sed0004826 vs. ExPASy TrEMBL
Match: A0A5C7H399 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023915 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 69/224 (30.80%), Postives = 111/224 (49.55%), Query Frame = 0


Query: 19  KAQEIFELEEEDVAAYESELEGVLTCKILSSNQISSDVFK-KGQSPNGEPWIYDDAVILF 78
           K + + E+ E        +++  L  K+L   +++ + FK + +     PW + +++I  
Sbjct: 18  KDEVVLEMTEVSRMDGVDDVDWCLVGKVLLGKKVNREAFKDRNRVWRRGPWHFGNSLIAL 77

Query: 79  EAMAGDKRVSEMEFAFGDFFVRLHDVPPACHTGNNARKLGSMLGKFLGWDGDGDKRNRGK 138
           E       +S++ F   +F++++HD+P  C     AR L   LG+ +    +  +   GK
Sbjct: 78  EKPIDTGNISKLGFNRANFWIQIHDIPILCMNRRTARWLAEQLGEVVEILLE-SRDCWGK 137

Query: 139 FLRLKIAIDVRRPLRRALKLKSGAMGAEKWVRLSYEKLLLFCRGCGRLGHMTSDC-SFVA 198
           F+R+K++ID+ +PL+R LKLKSG       V L YE+LL FC  CGR+GH   +C   VA
Sbjct: 138 FMRVKVSIDITKPLKRWLKLKSGTSEEIIMVGLKYERLLHFCYACGRIGHGIKECMDEVA 197

Query: 199 IGEGIPFPFGEDLR-------EPYRFSRGESGSPSRLAGRGRGR 234
              G P  FG  L+        P   S+G  GS  R    G  R
Sbjct: 198 RKAGTPTKFGSWLKASTFEKGRPRFNSKGSGGSSDRSRSLGASR 240

The following BLAST results are available for this feature:

BLAST of Sed0004826 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG60912.1	1.8e-21	32.58	hypothetical protein EZV62_012275 [Acer yangbiense]	[more]
VVA32948.1	4.8e-19	34.97	PREDICTED: DUF4283 domain-containing [Prunus dulcis]	[more]
XP_021726128.1	6.2e-19	38.27	uncharacterized protein LOC110693273 [Chenopodium quinoa]	[more]
CAB4262995.1	4.0e-18	33.87	unnamed protein product [Prunus armeniaca]	[more]
CAB4262994.1	4.0e-18	33.87	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Sed0004826 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004826 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7HXM5	8.5e-22	32.58	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01227...	[more]
A0A5E4G034	2.3e-19	34.97	PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569...	[more]
A0A6J5TJ60	2.0e-18	33.87	CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS...	[more]
A0A6J5TGK7	2.0e-18	33.87	CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS...	[more]
A0A5C7H399	3.3e-18	30.80	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02391...	[more]

BLAST of Sed0004826 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 145..193 e-value: 4.5E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..307
None	No IPR available	PANTHER	PTHR31286:SF26	BNAC07G15150D PROTEIN	coord: 38..266
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 38..266
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 179..192 score: 9.042855

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004826.1	Sed0004826.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding