Sed0004813 (gene) Chayote v1

Overview


Name	Sed0004813
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein
Location	LG08: 20916875 .. 20918411 (+)
RNA-Seq Expression	Sed0004813
Synteny	Sed0004813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTGAGGAACACGAACAAGATATCTATGGAATATTTAAAAAGGAAAAAAGAGAGACAAGTATCCTCATAAAAGGGGAAGAGATATGATTGCACATTTTGCCGTGTCAGCAAAATATAAACGAAAAACTTTTTTCTCCCTTACAAAGCCAATGGTCAAACAAACTCAAAAAACCACGGAGTCCCCTTTTTCTCTCTCTACAAACCAGCCGTCCAATCGCTCCCTTAAAAGCTTCACCTAATTTTCCTTCAAGATCCAGAATCAAGATGGATCAAATTCAATTTAGAAATCCAGATCAAGAACAGCAACATCGAGTTTTGGAAGATGATGAAGATTACTTTGATCTTGTTCCTGATGCGATCCTTCATCTCATCTTCAGCAAATTGATCGACGCTCGGTCTCTGATTCGATGCCTCGCCGTCTCCAAGCGATTCGCCTCTCTCATTTCGCAGTCCGACACCGTTTTCCTCCCCATTCCTCGTCCGCTTCTCGATTCTAAGCGGAGATCCAGAATCGCGCGCCGATCGCACCACCAGAATTCGATGATTAGGTTTTTGTTCCGTAAATTCGTTTTCTCGCCTCTTCGGTTGATCCGCCGTGTGGTTGCTCGAACCCCGCCGCCGAGATCTGGATTCGGCGATTGGTACTACTGGCCGAGCGTCGCGTTGAAGGAATTGAGAGGGATCAAGTTCGTCCACATGGAGCTCCCCTGCTGCGGCGACGAAATCGGCTCCATTCACGGCGGCGACGGTCCCCTCCTTAAATGGAAGTCCGAATTCGGCGCCGAATTGAAGAGCTGCGTCGTTCTCGGAGCCTCGTCGCTACGGCGGAAGTCGATCGTTGAAGAACGCGTAGATTCAGATCCGTCGGAGACGGAAATGGGAGACGAAGAGCTGAAATTGCGAATCGTGTGGACGATTTCGTCGCTAATCGCGGCTTCGATGAGGCATTATTTGGTGAAACAGATGGTGGCGGATTTTCCGATGCTGCAGAGCGTGGTGATTACAGATTCAACGAAGCAAGGGAGGTTGAGTATGGAGGAGGAGCAGCTAACCGAACTTAGGGATTCGATGAAATCATCGGCTGTGGAGAGAACTGCGATTCCAGATCTGAGCATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGTCGGGCTCTGTCATGACGGCGGCGACTCTCGTCGTGATCCGCCCGAGCGGTGCAGCTATGGATTTGGATGGATTGGATGGAATGGGCGATGAGTTGGATGCTGAAGAAGATGACAAACTCGGAGCCTATGGTGAAGCTGTCAGGAAATTGATGAAGTTCAAAAGAAACTATGCATTGGAGGTCAATTCTTTCTGACAATCATTGCTCTTAATTTTCGTTAGCTTTTTATTCATTCAGTTTTGGATTCTTTTTGGGCATTCAAATTTGATTTTGTTTGTTTGTTTGTTTTCTTATGAATGCTCAATTACTCTGGATTGACTTGTAAATCTTGTTTCCATTCTGGTCAGGTGTTACAAAATAGAGAGAATTTTTCACTTTCCATA

mRNA sequence

GTCTTGAGGAACACGAACAAGATATCTATGGAATATTTAAAAAGGAAAAAAGAGAGACAAGTATCCTCATAAAAGGGGAAGAGATATGATTGCACATTTTGCCGTGTCAGCAAAATATAAACGAAAAACTTTTTTCTCCCTTACAAAGCCAATGGTCAAACAAACTCAAAAAACCACGGAGTCCCCTTTTTCTCTCTCTACAAACCAGCCGTCCAATCGCTCCCTTAAAAGCTTCACCTAATTTTCCTTCAAGATCCAGAATCAAGATGGATCAAATTCAATTTAGAAATCCAGATCAAGAACAGCAACATCGAGTTTTGGAAGATGATGAAGATTACTTTGATCTTGTTCCTGATGCGATCCTTCATCTCATCTTCAGCAAATTGATCGACGCTCGGTCTCTGATTCGATGCCTCGCCGTCTCCAAGCGATTCGCCTCTCTCATTTCGCAGTCCGACACCGTTTTCCTCCCCATTCCTCGTCCGCTTCTCGATTCTAAGCGGAGATCCAGAATCGCGCGCCGATCGCACCACCAGAATTCGATGATTAGGTTTTTGTTCCGTAAATTCGTTTTCTCGCCTCTTCGGTTGATCCGCCGTGTGGTTGCTCGAACCCCGCCGCCGAGATCTGGATTCGGCGATTGGTACTACTGGCCGAGCGTCGCGTTGAAGGAATTGAGAGGGATCAAGTTCGTCCACATGGAGCTCCCCTGCTGCGGCGACGAAATCGGCTCCATTCACGGCGGCGACGGTCCCCTCCTTAAATGGAAGTCCGAATTCGGCGCCGAATTGAAGAGCTGCGTCGTTCTCGGAGCCTCGTCGCTACGGCGGAAGTCGATCGTTGAAGAACGCGTAGATTCAGATCCGTCGGAGACGGAAATGGGAGACGAAGAGCTGAAATTGCGAATCGTGTGGACGATTTCGTCGCTAATCGCGGCTTCGATGAGGCATTATTTGGTGAAACAGATGGTGGCGGATTTTCCGATGCTGCAGAGCGTGGTGATTACAGATTCAACGAAGCAAGGGAGGTTGAGTATGGAGGAGGAGCAGCTAACCGAACTTAGGGATTCGATGAAATCATCGGCTGTGGAGAGAACTGCGATTCCAGATCTGAGCATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGTCGGGCTCTGTCATGACGGCGGCGACTCTCGTCGTGATCCGCCCGAGCGGTGCAGCTATGGATTTGGATGGATTGGATGGAATGGGCGATGAGTTGGATGCTGAAGAAGATGACAAACTCGGAGCCTATGGTGAAGCTGTCAGGAAATTGATGAAGTTCAAAAGAAACTATGCATTGGAGGTCAATTCTTTCTGACAATCATTGCTCTTAATTTTCGTTAGCTTTTTATTCATTCAGTTTTGGATTCTTTTTGGGCATTCAAATTTGATTTTGTTTGTTTGTTTGTTTTCTTATGAATGCTCAATTACTCTGGATTGACTTGTAAATCTTGTTTCCATTCTGGTCAGGTGTTACAAAATAGAGAGAATTTTTCACTTTCCATA

Coding sequence (CDS)

ATGGATCAAATTCAATTTAGAAATCCAGATCAAGAACAGCAACATCGAGTTTTGGAAGATGATGAAGATTACTTTGATCTTGTTCCTGATGCGATCCTTCATCTCATCTTCAGCAAATTGATCGACGCTCGGTCTCTGATTCGATGCCTCGCCGTCTCCAAGCGATTCGCCTCTCTCATTTCGCAGTCCGACACCGTTTTCCTCCCCATTCCTCGTCCGCTTCTCGATTCTAAGCGGAGATCCAGAATCGCGCGCCGATCGCACCACCAGAATTCGATGATTAGGTTTTTGTTCCGTAAATTCGTTTTCTCGCCTCTTCGGTTGATCCGCCGTGTGGTTGCTCGAACCCCGCCGCCGAGATCTGGATTCGGCGATTGGTACTACTGGCCGAGCGTCGCGTTGAAGGAATTGAGAGGGATCAAGTTCGTCCACATGGAGCTCCCCTGCTGCGGCGACGAAATCGGCTCCATTCACGGCGGCGACGGTCCCCTCCTTAAATGGAAGTCCGAATTCGGCGCCGAATTGAAGAGCTGCGTCGTTCTCGGAGCCTCGTCGCTACGGCGGAAGTCGATCGTTGAAGAACGCGTAGATTCAGATCCGTCGGAGACGGAAATGGGAGACGAAGAGCTGAAATTGCGAATCGTGTGGACGATTTCGTCGCTAATCGCGGCTTCGATGAGGCATTATTTGGTGAAACAGATGGTGGCGGATTTTCCGATGCTGCAGAGCGTGGTGATTACAGATTCAACGAAGCAAGGGAGGTTGAGTATGGAGGAGGAGCAGCTAACCGAACTTAGGGATTCGATGAAATCATCGGCTGTGGAGAGAACTGCGATTCCAGATCTGAGCATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGTCGGGCTCTGTCATGACGGCGGCGACTCTCGTCGTGATCCGCCCGAGCGGTGCAGCTATGGATTTGGATGGATTGGATGGAATGGGCGATGAGTTGGATGCTGAAGAAGATGACAAACTCGGAGCCTATGGTGAAGCTGTCAGGAAATTGATGAAGTTCAAAAGAAACTATGCATTGGAGGTCAATTCTTTCTGA

Protein sequence

MDQIQFRNPDQEQQHRVLEDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVVARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVVLGASSLRRKSIVEERVDSDPSETEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSAVERTAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLMKFKRNYALEVNSF

Homology

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BLAST of Sed0004813 vs. NCBI nr
Match: XP_023004391.1 (F-box protein At4g18380-like [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 2.9e-156
Identity = 305/384 (79.43%), Postives = 320/384 (83.33%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVLE----------DDEDYFDLVPDAILHLIFSKLIDARSLIRCLA 61
           +Q + RN  QEQQ  V+E          DD DYFDL+PDAILHLIF+KLIDARSLIRCLA
Sbjct: 6   NQFEIRNRGQEQQQLVVEEEEEDDDEDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLA 65

Query: 62  VSKRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRR 121
           VSKRFASLISQSDTVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRR
Sbjct: 66  VSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRR 125

Query: 122 VVARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEF 181
           V+ RT PP SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EF
Sbjct: 126 VITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEF 185

Query: 182 GAELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSL 241
           GAELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSL
Sbjct: 186 GAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSL 245

Query: 242 IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VER 301
           IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VER
Sbjct: 246 IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLYMEEKQLKELRDSMKSSTSNQSPVER 305

Query: 302 TAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKL 361
           T IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS A M LDGLD MGDE DAEE +KL
Sbjct: 306 TVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKL 365

[Close]

BLAST of Sed0004813 vs. NCBI nr
Match: XP_023530591.1 (F-box protein At4g18380-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.3 bits (1440), Expect = 2.4e-155
Identity = 303/382 (79.32%), Postives = 318/382 (83.25%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVLE--------DDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVS 61
           +Q + RN  QEQQ  V+E        DD DYFDL+PDAILHLIF+KLIDARSLIRCLAVS
Sbjct: 6   NQFEIRNRGQEQQQLVVEEEDEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLAVS 65

Query: 62  KRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVV 121
           KRFASLISQSDTVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRRV+
Sbjct: 66  KRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRRVI 125

Query: 122 ARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGA 181
            RT PP SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EFGA
Sbjct: 126 TRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEFGA 185

Query: 182 ELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLIA 241
           ELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSLIA
Sbjct: 186 ELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIA 245

Query: 242 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VERTA 301
           ASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VERT 
Sbjct: 246 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTV 305

Query: 302 IPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGA 361
           IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS   M LDGLD MGDE DAEE +K GA
Sbjct: 306 IPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSTGMALDGLDKMGDEFDAEETEKHGA 365

[Close]

BLAST of Sed0004813 vs. NCBI nr
Match: XP_022928580.1 (F-box protein At4g18380-like [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 1.7e-153
Identity = 300/382 (78.53%), Postives = 317/382 (82.98%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVL--------EDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVS 61
           DQ + RN  QEQQ  V+        +DD DYFDL+PDAILHLIF+KLIDARSLIRCLAVS
Sbjct: 6   DQFEIRNRGQEQQQLVVDEEEEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLAVS 65

Query: 62  KRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVV 121
           KRFASLI QS+TVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRRV+
Sbjct: 66  KRFASLILQSETVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRRVI 125

Query: 122 ARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGA 181
            RT  P SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EFGA
Sbjct: 126 TRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEFGA 185

Query: 182 ELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLIA 241
           ELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSLIA
Sbjct: 186 ELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIA 245

Query: 242 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VERTA 301
           ASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VERT 
Sbjct: 246 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTV 305

Query: 302 IPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGA 361
           IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS A + LDGLD MGDE DAEE +K GA
Sbjct: 306 IPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGIALDGLDKMGDEFDAEETEKHGA 365

[Close]

BLAST of Sed0004813 vs. NCBI nr
Match: KAG7022105.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.7 bits (1410), Expect = 7.3e-152
Identity = 297/379 (78.36%), Postives = 314/379 (82.85%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVL--------EDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVS 61
           DQ + RN  QEQQ  V+        +DD DYFDL+PDAILHLIF+KLIDARSLIRCLAVS
Sbjct: 6   DQFEIRNRGQEQQQLVVDEEEEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLAVS 65

Query: 62  KRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVV 121
           KRFASLI QS+TVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRRV+
Sbjct: 66  KRFASLILQSETVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRRVI 125

Query: 122 ARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGA 181
            RT  P SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EFGA
Sbjct: 126 TRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEFGA 185

Query: 182 ELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLIA 241
           ELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSLIA
Sbjct: 186 ELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIA 245

Query: 242 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VERTA 301
           ASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VERT 
Sbjct: 246 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTV 305

Query: 302 IPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGA 358
           IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS A M LDGLD MGDE DAEE +K GA
Sbjct: 306 IPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKHGA 365

[Close]

BLAST of Sed0004813 vs. NCBI nr
Match: KAG6588209.1 (putative magnesium transporter NIPA4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 542.3 bits (1396), Expect = 3.1e-150
Identity = 293/379 (77.31%), Postives = 313/379 (82.59%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVL---------EDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAV 61
           DQ + RN  QEQQ  V+         +DD DYFDL+PDA+LHLIF+KLIDARSLIRCLAV
Sbjct: 6   DQFEIRNRGQEQQQLVVDEEEEEEDDDDDLDYFDLLPDAVLHLIFNKLIDARSLIRCLAV 65

Query: 62  SKRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRV 121
           SKRFASLI QS+TVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRRV
Sbjct: 66  SKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRRV 125

Query: 122 VARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFG 181
           + RT  P SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EFG
Sbjct: 126 ITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEFG 185

Query: 182 AELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLI 241
           AELKSCVVLGAS+LRRKSIV          EERV    SETE+GDEELKLRIVWTISSLI
Sbjct: 186 AELKSCVVLGASTLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLI 245

Query: 242 AASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VERT 301
           AASMRHYLVKQMVADFPMLQSVV+TDSTKQGRL MEE+QL ELRDSMKSS      VERT
Sbjct: 246 AASMRHYLVKQMVADFPMLQSVVMTDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERT 305

Query: 302 AIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLG 357
            IPDL MKMWHVPVLDLPASGSVMTAATLVVI+PS A M LDGLD MGDE DAEE +K G
Sbjct: 306 VIPDLHMKMWHVPVLDLPASGSVMTAATLVVIKPSSAGMALDGLDKMGDEFDAEETEKHG 365

[Close]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot
Match: O49508 (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-47
Identity = 141/373 (37.80%), Postives = 204/373 (54.69%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FD +PD+IL LIF+ + D ++L RC  VSKRF SLI Q + VF+ +   + D    S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 83  IA--RRSHHQNSMIRFLFRKFVFSPLRLIRRVVART--------PPPRSGF--------- 142
           ++   RS    S    +FR  VF PL+ + + + R+          P S           
Sbjct: 83  LSDKPRSASAASPFSAIFR-LVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEI 142

Query: 143 ---GDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVV 202
              G  ++ P+  LK    IKF+ +ELP      G +   DG LLKW++EFG+ L++CV+
Sbjct: 143 EQGGVTHHSPTQVLKNFDEIKFLKIELPS-----GELGIDDGVLLKWRAEFGSTLENCVI 202

Query: 203 LGASSL---------RRKSIVEERVDSDPS--ETEMGDEELKLRIVWTISSLIAASMRHY 262
           LGASS+            S     V+ + S  E+   +  LKLR+VWTISSLIAAS RHY
Sbjct: 203 LGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHY 262

Query: 263 LVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELR--DSMKSSAVERTAIPDLSMKMW 322
           L++ ++A+   L S+V+TD   QG L M  +QL ELR      SSA +RT +P L+M++W
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLW 322

Query: 323 HVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLM 361
           + P L+LP  G+V+  ATLV IRPS +  ++  +  +    D         YG A + L+
Sbjct: 323 YAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDE-------PYGVAAKMLV 380

[Close]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot
Match: Q9C534 (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.1e-45
Identity = 130/374 (34.76%), Postives = 200/374 (53.48%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FDL+PD++L LIF K+ D + L RC  VS+RF SL+   + V + +   + D    S 
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 83  IARRSHHQN---------------SMIRFLFRKFVFSPLRLIRRVVARTPPPRSG----- 142
                   N               ++ R +F   +F P +++ +++    P RS      
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILG---PKRSSSSFDA 143

Query: 143 --------FGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAE 202
                    G  ++ P+  LK    I+F+ +ELP      G +   DG LLKW+++FG+ 
Sbjct: 144 SFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELP-----TGELGIEDGILLKWRADFGST 203

Query: 203 LKSCVVLGASSLRRKSIV---EERVDSDPS---ETEMGDEELKLRIVWTISSLIAASMRH 262
           L +C++LGASS+ + + V   E  VD D     E+   +  LKLR+VWTISSLIAAS RH
Sbjct: 204 LDNCMILGASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARH 263

Query: 263 YLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDS--MKSSAVERTAIPDLSMKM 322
           YL++ ++ +   L  +V++D+  QG L M  EQL ELR +    SSA +RT +P L+M++
Sbjct: 264 YLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRL 323

Query: 323 WHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKL 361
           W+ P LDLP  G+V+  ATLV IRPS +  ++     + D  +         +G   + L
Sbjct: 324 WYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAFEE-------PFGTVAKML 379

[Close]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot
Match: Q9FNK5 (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-43
Identity = 136/385 (35.32%), Postives = 202/385 (52.47%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLL--DSKRR 82
           D+FD +PD+IL L+F+K+ D ++L RC  VS+RF SL+ Q D V + +   +   DS   
Sbjct: 25  DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSL 84

Query: 83  SRIARRSHHQNSMIRFLFRKFV---FSPLRLIRRVVA--RTPPPRSGFGD---------- 142
           S I  RS         +FR  V     PL+ + + +   R+     G G           
Sbjct: 85  SSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSSSSSLSISGD 144

Query: 143 -----------WYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAE 202
                       ++ P+  LK    I+++ +ELP      G +   DG LLKW++EFG+ 
Sbjct: 145 DDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPS-----GELGIDDGVLLKWRAEFGST 204

Query: 203 LKSCVVLGASSL------------RRKSIVE---ERVDSDPS--ETEMGDEELKLRIVWT 262
           L +CV+LGASS+               ++VE      D + S  E+   +  LKLR+VWT
Sbjct: 205 LDNCVILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWT 264

Query: 263 ISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELR--DSMKSSAVE 322
           ISSLIAAS RHYL++ ++A+   L S+V+TDS  QG L M  +QL ELR      SSA +
Sbjct: 265 ISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSASK 324

Query: 323 RTAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDK 361
           RT +P L+M++W+ P L+LP  G+V+  ATLV IRPS +  ++  +  +    +      
Sbjct: 325 RTLVPALNMRLWYAPTLELP-DGTVLKGATLVAIRPSESKKEVSDISWVSSAFEE----- 384

[Close]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot
Match: Q9C9S2 (F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 129/368 (35.05%), Postives = 197/368 (53.53%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPL----LDSK 82
           D FD +PD ++  I +++ D ++LIRC +VSKRF SL +QS+++ L + + L     DS+
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 83  RRSRIARRSHHQNSMIRFLFRKF------VFSPLRLIRRVVARTPPPRSGFGDWYYWPSV 142
             S IA       S  R LF+        +FS       ++ R+P            P+ 
Sbjct: 62  IDSPIA-------SFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKT----------PAQ 121

Query: 143 ALKELRGIKFVHMELPCCGDEIGSIHGGD-----GPLLKWKSEFGAELKSCVVLG----- 202
            L     I+ + +EL          +GGD     G  +KWK+EFG  LKSCV++      
Sbjct: 122 ILSGFERIRNLEVEL----------YGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAT 181

Query: 203 ---ASSLRRKSIVEERVDSDPSETEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADFP 262
              +++    ++V+  V+SD SE   G   LK R+VWTIS+L+AAS RHYL++ +V D  
Sbjct: 182 VNTSAATEAAAVVDGVVESD-SEFVCG---LKTRVVWTISALMAASTRHYLMRDLVKDHK 241

Query: 263 MLQSVVITDSTKQGRL-----SMEEEQLTELRDSMKSS--AVERTAIPDLSMKMWHVPVL 322
            ++ +++ DS  +G +      M+E + TE+R   K S    ERT +P + M M H P L
Sbjct: 242 EMEKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSL 301

Query: 323 DLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLMKFKRN 361
            L  SG  + AATLVV+RP+G A D + ++ + +    + DD +  YGEAV  L+K +RN
Sbjct: 302 ML-KSGICLEAATLVVVRPTGVASDDNDVELVTEAFAGDGDDCM--YGEAVTALLKRRRN 334

[Close]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot
Match: Q9LM18 (F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.2e-36
Identity = 118/347 (34.01%), Postives = 180/347 (51.87%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D FD +PD I+  I +K+ D ++L+RC ++SKRF SL+ QS+++ L +   + DS     
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSP---- 61

Query: 83  IARRSHHQNSMIRFLFRKFVFSPLRLIRRVVARTPPPRSGFGDWYYWPSVALKELRGIKF 142
                    S+ R LF   V    +  + +   T  P          P   L     I+ 
Sbjct: 62  ------VVTSIFRSLFNGLVSLLSKPAKPITITTLSPS--------LPFKILSRFDRIRN 121

Query: 143 VHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVVLGASSLRRKSIVEERVDSDPSE 202
           + +ELP      G +    G  +KWK+EFG  LKSCV++   + R    V   V  +   
Sbjct: 122 LDVELPG-----GDVKLEKGAAVKWKAEFGKTLKSCVIV---AFRSAGTVSSPVAVEGES 181

Query: 203 TEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQL 262
                  LK R+VWTIS+L+AAS RHYL++++V +   ++S+V+ D  ++G + M EE L
Sbjct: 182 DAEFVTGLKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGL 241

Query: 263 TELR-------DSMKSSAVERTAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAA 322
            ELR       D  +    +R+ +P + M M H P L L  SG  + +ATLV++RPSGA 
Sbjct: 242 KELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKL-KSGICLESATLVIVRPSGAD 301

Query: 323 MDLDGLDGMGDELDAEEDDKLG--AYGEAVRKLMKFKRNYALEVNSF 361
            +      +GD+ +   +  +G   YGEAV  L+K K+N ALE+NSF
Sbjct: 302 FE------VGDDAELATEAFVGDCMYGEAVVALLKCKKN-ALEMNSF 314

[Close]

BLAST of Sed0004813 vs. ExPASy TrEMBL
Match: A0A6J1KS00 (F-box protein At4g18380-like OS=Cucurbita maxima OX=3661 GN=LOC111497724 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 305/384 (79.43%), Postives = 320/384 (83.33%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVLE----------DDEDYFDLVPDAILHLIFSKLIDARSLIRCLA 61
           +Q + RN  QEQQ  V+E          DD DYFDL+PDAILHLIF+KLIDARSLIRCLA
Sbjct: 6   NQFEIRNRGQEQQQLVVEEEEEDDDEDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLA 65

Query: 62  VSKRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRR 121
           VSKRFASLISQSDTVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRR
Sbjct: 66  VSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRR 125

Query: 122 VVARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEF 181
           V+ RT PP SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EF
Sbjct: 126 VITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEF 185

Query: 182 GAELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSL 241
           GAELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSL
Sbjct: 186 GAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSL 245

Query: 242 IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VER 301
           IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VER
Sbjct: 246 IAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLYMEEKQLKELRDSMKSSTSNQSPVER 305

Query: 302 TAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKL 361
           T IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS A M LDGLD MGDE DAEE +KL
Sbjct: 306 TVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGMALDGLDKMGDEFDAEETEKL 365

[Close]

BLAST of Sed0004813 vs. ExPASy TrEMBL
Match: A0A6J1ES21 (F-box protein At4g18380-like OS=Cucurbita moschata OX=3662 GN=LOC111435352 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 8.4e-154
Identity = 300/382 (78.53%), Postives = 317/382 (82.98%), Query Frame = 0


Query: 2   DQIQFRNPDQEQQHRVL--------EDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVS 61
           DQ + RN  QEQQ  V+        +DD DYFDL+PDAILHLIF+KLIDARSLIRCLAVS
Sbjct: 6   DQFEIRNRGQEQQQLVVDEEEEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIRCLAVS 65

Query: 62  KRFASLISQSDTVFLPIPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVV 121
           KRFASLI QS+TVFL IPRP+LDSKR+SR+ RRS   NS+IRF  RKFVF+P R IRRV+
Sbjct: 66  KRFASLILQSETVFLAIPRPVLDSKRKSRVGRRS-PPNSLIRFFVRKFVFTPFRFIRRVI 125

Query: 122 ARTPPPRSGFGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGA 181
            RT  P SGFGDWYYWPSVALKE RGIKFVHMELPCCGDEIGSIHGG GPLLKWK+EFGA
Sbjct: 126 TRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGG-GPLLKWKAEFGA 185

Query: 182 ELKSCVVLGASSLRRKSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLIA 241
           ELKSCVVLGASSLRRKSIV          EERV    SETE+GDEELKLRIVWTISSLIA
Sbjct: 186 ELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISSLIA 245

Query: 242 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDSMKSSA-----VERTA 301
           ASMRHYLVKQMVADFPMLQSVVITDSTKQGRL MEE+QL ELRDSMKSS      VERT 
Sbjct: 246 ASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQSPVERTV 305

Query: 302 IPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGA 361
           IPDL MKMWHVPVLDLPASGSVMTAATLVVIRPS A + LDGLD MGDE DAEE +K GA
Sbjct: 306 IPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSAGIALDGLDKMGDEFDAEETEKHGA 365

[Close]

BLAST of Sed0004813 vs. ExPASy TrEMBL
Match: A0A6J1DNC4 (F-box protein At4g18380-like OS=Momordica charantia OX=3673 GN=LOC111021606 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.4e-137
Identity = 263/367 (71.66%), Postives = 303/367 (82.56%), Query Frame = 0


Query: 10  DQEQQHRVLEDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLP 69
           DQ+Q+H     +EDYFD +PDA+L LIF+KLIDARSL+RCLAV++RF SLI  SD VFL 
Sbjct: 3   DQDQEH-----EEDYFDRLPDALLLLIFNKLIDARSLLRCLAVNRRFGSLIPHSDAVFLA 62

Query: 70  IPRPLLDSKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVVAR-TPPPRSGFGDWYY 129
           IPRPLLD K +S  A R H   S +R+ FRKFVF+P+R +RR +AR +PPP SGFGDWY+
Sbjct: 63  IPRPLLDHKGKS--ALRRHSPQSSLRYFFRKFVFTPIRFLRRAIARSSPPPSSGFGDWYH 122

Query: 130 WPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVVLGASSLRR 189
           WPS AL+E  GIKFVHMELPCCG EIGS HGGD PLLKWK+EFG ELKSCVVLGASSLRR
Sbjct: 123 WPSAALREFGGIKFVHMELPCCGGEIGSDHGGD-PLLKWKAEFGTELKSCVVLGASSLRR 182

Query: 190 KSIV----------EERVDSDPSETEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADF 249
           +SI           EERVD++ SE+++GDEELKLRIVWTIS+LIAASMRHY VKQMV+DF
Sbjct: 183 RSIAPSNSDAKETGEERVDAE-SESDIGDEELKLRIVWTISALIAASMRHYFVKQMVSDF 242

Query: 250 PMLQSVVITDSTKQGRLSMEEEQLTELRDSMKS-----SAVERTAIPDLSMKMWHVPVLD 309
           PMLQSVVITDSTKQGRL M E+QLTELR+SMKS     S VERT IPDL+MKMWHVPVLD
Sbjct: 243 PMLQSVVITDSTKQGRLCMREKQLTELRESMKSSDSIQSRVERTVIPDLNMKMWHVPVLD 302

Query: 310 LPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLMKFKRNY 361
           LPASG VMTAATL+VIRP+ A  +L+GLD MGD+ DAEE++KLGAYGEAV+K+MK KRNY
Sbjct: 303 LPASGFVMTAATLIVIRPTAAGTELEGLDTMGDDFDAEEEEKLGAYGEAVKKMMKLKRNY 360

[Close]

BLAST of Sed0004813 vs. ExPASy TrEMBL
Match: A0A5A7UJD0 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002200 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.4e-121
Identity = 239/359 (66.57%), Postives = 280/359 (77.99%), Query Frame = 0


Query: 17  VLEDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLD 76
           +    +D+FDL+PD+ILHLIF+KL  A SLIRCL VSKRFASLISQSD+VFL IP  LL 
Sbjct: 18  IQNQQQDFFDLLPDSILHLIFTKLTHAPSLIRCLTVSKRFASLISQSDSVFLSIPPLLLT 77

Query: 77  SKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVVARTPPPRSGFGDWYYWPSVALKE 136
              +SR    S      +RF FRKF+F+P R IRR++  T    S F DWYYWPSVALKE
Sbjct: 78  PNPKSRTTPPS------LRFFFRKFLFNPFRFIRRLITHTSQSTSRFSDWYYWPSVALKE 137

Query: 137 LRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVVLGASSLRRKSIV---- 196
           L+G+K +H+ELPCCGDEIGS H G G LLKWK+EFG++LK+CVVLGASSLRRKS+V    
Sbjct: 138 LKGLKSLHIELPCCGDEIGSNHNG-GALLKWKAEFGSQLKTCVVLGASSLRRKSVVESES 197

Query: 197 --------EERVDSDPSETEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSV 256
                   E R+ S+ SE+EMGD ELK RIVWTISSLIAASMRHYLVKQMV DFP+L++V
Sbjct: 198 SEVKAETEENRLHSE-SESEMGDGELKSRIVWTISSLIAASMRHYLVKQMVNDFPLLKTV 257

Query: 257 VITDSTKQGRLSMEEEQLTELRDSMK---SSAVERTAIPDLSMKMWHVPVLDLPASGSVM 316
           +ITDS KQGRL MEEE++ ELR+SMK   SS VER+ IPDL MKMW+VPVLDL A+G VM
Sbjct: 258 LITDSAKQGRLCMEEEEVMELRESMKLSSSSCVERSVIPDLKMKMWYVPVLDLAAAGFVM 317

Query: 317 TAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLMKFKRNYALEVNSF 361
           TAATLVVI+PSG  M LDGL+ +GDE D+E+ +K G YGEAVRKLMK KRNYALEVNSF
Sbjct: 318 TAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNYALEVNSF 368

[Close]

BLAST of Sed0004813 vs. ExPASy TrEMBL
Match: A0A1S3BP50 (F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.4e-121
Identity = 239/359 (66.57%), Postives = 280/359 (77.99%), Query Frame = 0


Query: 17  VLEDDEDYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLD 76
           +    +D+FDL+PD+ILHLIF+KL  A SLIRCL VSKRFASLISQSD+VFL IP  LL 
Sbjct: 18  IQNQQQDFFDLLPDSILHLIFTKLTHAPSLIRCLTVSKRFASLISQSDSVFLSIPPLLLT 77

Query: 77  SKRRSRIARRSHHQNSMIRFLFRKFVFSPLRLIRRVVARTPPPRSGFGDWYYWPSVALKE 136
              +SR    S      +RF FRKF+F+P R IRR++  T    S F DWYYWPSVALKE
Sbjct: 78  PNPKSRTTPPS------LRFFFRKFLFNPFRFIRRLITHTSQSTSRFSDWYYWPSVALKE 137

Query: 137 LRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVVLGASSLRRKSIV---- 196
           L+G+K +H+ELPCCGDEIGS H G G LLKWK+EFG++LK+CVVLGASSLRRKS+V    
Sbjct: 138 LKGLKSLHIELPCCGDEIGSNHNG-GALLKWKAEFGSQLKTCVVLGASSLRRKSVVESES 197

Query: 197 --------EERVDSDPSETEMGDEELKLRIVWTISSLIAASMRHYLVKQMVADFPMLQSV 256
                   E R+ S+ SE+EMGD ELK RIVWTISSLIAASMRHYLVKQMV DFP+L++V
Sbjct: 198 SEVKAETEENRLHSE-SESEMGDGELKSRIVWTISSLIAASMRHYLVKQMVNDFPLLKTV 257

Query: 257 VITDSTKQGRLSMEEEQLTELRDSMK---SSAVERTAIPDLSMKMWHVPVLDLPASGSVM 316
           +ITDS KQGRL MEEE++ ELR+SMK   SS VER+ IPDL MKMW+VPVLDL A+G VM
Sbjct: 258 LITDSAKQGRLCMEEEEVMELRESMKLSSSSCVERSVIPDLKMKMWYVPVLDLAAAGFVM 317

Query: 317 TAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLMKFKRNYALEVNSF 361
           TAATLVVI+PSG  M LDGL+ +GDE D+E+ +K G YGEAVRKLMK KRNYALEVNSF
Sbjct: 318 TAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNYALEVNSF 368

[Close]

BLAST of Sed0004813 vs. TAIR 10
Match: AT4G18380.1 (F-box family protein )

HSP 1 Score: 189.5 bits (480), Expect = 4.7e-48
Identity = 141/373 (37.80%), Postives = 204/373 (54.69%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FD +PD+IL LIF+ + D ++L RC  VSKRF SLI Q + VF+ +   + D    S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 83  IA--RRSHHQNSMIRFLFRKFVFSPLRLIRRVVART--------PPPRSGF--------- 142
           ++   RS    S    +FR  VF PL+ + + + R+          P S           
Sbjct: 83  LSDKPRSASAASPFSAIFR-LVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEI 142

Query: 143 ---GDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVV 202
              G  ++ P+  LK    IKF+ +ELP      G +   DG LLKW++EFG+ L++CV+
Sbjct: 143 EQGGVTHHSPTQVLKNFDEIKFLKIELPS-----GELGIDDGVLLKWRAEFGSTLENCVI 202

Query: 203 LGASSL---------RRKSIVEERVDSDPS--ETEMGDEELKLRIVWTISSLIAASMRHY 262
           LGASS+            S     V+ + S  E+   +  LKLR+VWTISSLIAAS RHY
Sbjct: 203 LGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHY 262

Query: 263 LVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELR--DSMKSSAVERTAIPDLSMKMW 322
           L++ ++A+   L S+V+TD   QG L M  +QL ELR      SSA +RT +P L+M++W
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLW 322

Query: 323 HVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLM 361
           + P L+LP  G+V+  ATLV IRPS +  ++  +  +    D         YG A + L+
Sbjct: 323 YAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDE-------PYGVAAKMLV 380

[Close]

BLAST of Sed0004813 vs. TAIR 10
Match: AT4G18380.2 (F-box family protein )

HSP 1 Score: 189.5 bits (480), Expect = 4.7e-48
Identity = 141/373 (37.80%), Postives = 204/373 (54.69%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FD +PD+IL LIF+ + D ++L RC  VSKRF SLI Q + VF+ +   + D    S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 83  IA--RRSHHQNSMIRFLFRKFVFSPLRLIRRVVART--------PPPRSGF--------- 142
           ++   RS    S    +FR  VF PL+ + + + R+          P S           
Sbjct: 83  LSDKPRSASAASPFSAIFR-LVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEI 142

Query: 143 ---GDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAELKSCVV 202
              G  ++ P+  LK    IKF+ +ELP      G +   DG LLKW++EFG+ L++CV+
Sbjct: 143 EQGGVTHHSPTQVLKNFDEIKFLKIELPS-----GELGIDDGVLLKWRAEFGSTLENCVI 202

Query: 203 LGASSL---------RRKSIVEERVDSDPS--ETEMGDEELKLRIVWTISSLIAASMRHY 262
           LGASS+            S     V+ + S  E+   +  LKLR+VWTISSLIAAS RHY
Sbjct: 203 LGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHY 262

Query: 263 LVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELR--DSMKSSAVERTAIPDLSMKMW 322
           L++ ++A+   L S+V+TD   QG L M  +QL ELR      SSA +RT +P L+M++W
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLW 322

Query: 323 HVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKLM 361
           + P L+LP  G+V+  ATLV IRPS +  ++  +  +    D         YG A + L+
Sbjct: 323 YAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDE-------PYGVAAKMLV 380

[Close]

BLAST of Sed0004813 vs. TAIR 10
Match: AT1G30200.2 (F-box family protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.7e-46
Identity = 130/374 (34.76%), Postives = 200/374 (53.48%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FDL+PD++L LIF K+ D + L RC  VS+RF SL+   + V + +   + D    S 
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 83  IARRSHHQN---------------SMIRFLFRKFVFSPLRLIRRVVARTPPPRSG----- 142
                   N               ++ R +F   +F P +++ +++    P RS      
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILG---PKRSSSSFDA 143

Query: 143 --------FGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAE 202
                    G  ++ P+  LK    I+F+ +ELP      G +   DG LLKW+++FG+ 
Sbjct: 144 SFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELP-----TGELGIEDGILLKWRADFGST 203

Query: 203 LKSCVVLGASSLRRKSIV---EERVDSDPS---ETEMGDEELKLRIVWTISSLIAASMRH 262
           L +C++LGASS+ + + V   E  VD D     E+   +  LKLR+VWTISSLIAAS RH
Sbjct: 204 LDNCMILGASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARH 263

Query: 263 YLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDS--MKSSAVERTAIPDLSMKM 322
           YL++ ++ +   L  +V++D+  QG L M  EQL ELR +    SSA +RT +P L+M++
Sbjct: 264 YLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRL 323

Query: 323 WHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKL 361
           W+ P LDLP  G+V+  ATLV IRPS +  ++     + D  +         +G   + L
Sbjct: 324 WYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAFEE-------PFGTVAKML 379

[Close]

BLAST of Sed0004813 vs. TAIR 10
Match: AT1G30200.1 (F-box family protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.7e-46
Identity = 130/374 (34.76%), Postives = 200/374 (53.48%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLLDSKRRSR 82
           D+FDL+PD++L LIF K+ D + L RC  VS+RF SL+   + V + +   + D    S 
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 83  IARRSHHQN---------------SMIRFLFRKFVFSPLRLIRRVVARTPPPRSG----- 142
                   N               ++ R +F   +F P +++ +++    P RS      
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILG---PKRSSSSFDA 143

Query: 143 --------FGDWYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAE 202
                    G  ++ P+  LK    I+F+ +ELP      G +   DG LLKW+++FG+ 
Sbjct: 144 SFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELP-----TGELGIEDGILLKWRADFGST 203

Query: 203 LKSCVVLGASSLRRKSIV---EERVDSDPS---ETEMGDEELKLRIVWTISSLIAASMRH 262
           L +C++LGASS+ + + V   E  VD D     E+   +  LKLR+VWTISSLIAAS RH
Sbjct: 204 LDNCMILGASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARH 263

Query: 263 YLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELRDS--MKSSAVERTAIPDLSMKM 322
           YL++ ++ +   L  +V++D+  QG L M  EQL ELR +    SSA +RT +P L+M++
Sbjct: 264 YLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRL 323

Query: 323 WHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDKLGAYGEAVRKL 361
           W+ P LDLP  G+V+  ATLV IRPS +  ++     + D  +         +G   + L
Sbjct: 324 WYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAFEE-------PFGTVAKML 379

[Close]

BLAST of Sed0004813 vs. TAIR 10
Match: AT5G46170.1 (F-box family protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-44
Identity = 136/385 (35.32%), Postives = 202/385 (52.47%), Query Frame = 0


Query: 23  DYFDLVPDAILHLIFSKLIDARSLIRCLAVSKRFASLISQSDTVFLPIPRPLL--DSKRR 82
           D+FD +PD+IL L+F+K+ D ++L RC  VS+RF SL+ Q D V + +   +   DS   
Sbjct: 25  DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSL 84

Query: 83  SRIARRSHHQNSMIRFLFRKFV---FSPLRLIRRVVA--RTPPPRSGFGD---------- 142
           S I  RS         +FR  V     PL+ + + +   R+     G G           
Sbjct: 85  SSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSSSSSLSISGD 144

Query: 143 -----------WYYWPSVALKELRGIKFVHMELPCCGDEIGSIHGGDGPLLKWKSEFGAE 202
                       ++ P+  LK    I+++ +ELP      G +   DG LLKW++EFG+ 
Sbjct: 145 DDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPS-----GELGIDDGVLLKWRAEFGST 204

Query: 203 LKSCVVLGASSL------------RRKSIVE---ERVDSDPS--ETEMGDEELKLRIVWT 262
           L +CV+LGASS+               ++VE      D + S  E+   +  LKLR+VWT
Sbjct: 205 LDNCVILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWT 264

Query: 263 ISSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLSMEEEQLTELR--DSMKSSAVE 322
           ISSLIAAS RHYL++ ++A+   L S+V+TDS  QG L M  +QL ELR      SSA +
Sbjct: 265 ISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSASK 324

Query: 323 RTAIPDLSMKMWHVPVLDLPASGSVMTAATLVVIRPSGAAMDLDGLDGMGDELDAEEDDK 361
           RT +P L+M++W+ P L+LP  G+V+  ATLV IRPS +  ++  +  +    +      
Sbjct: 325 RTLVPALNMRLWYAPTLELP-DGTVLKGATLVAIRPSESKKEVSDISWVSSAFEE----- 384

The following BLAST results are available for this feature:

BLAST of Sed0004813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004391.1	2.9e-156	79.43	F-box protein At4g18380-like [Cucurbita maxima]	[more]
XP_023530591.1	2.4e-155	79.32	F-box protein At4g18380-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928580.1	1.7e-153	78.53	F-box protein At4g18380-like [Cucurbita moschata]	[more]
KAG7022105.1	7.3e-152	78.36	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588209.1	3.1e-150	77.31	putative magnesium transporter NIPA4, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Sed0004813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49508	6.6e-47	37.80	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
Q9C534	8.1e-45	34.76	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]
Q9FNK5	1.5e-43	35.32	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
Q9C9S2	1.2e-37	35.05	F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1	[more]
Q9LM18	5.2e-36	34.01	F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1	[more]

BLAST of Sed0004813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS00	1.4e-156	79.43	F-box protein At4g18380-like OS=Cucurbita maxima OX=3661 GN=LOC111497724 PE=4 SV...	[more]
A0A6J1ES21	8.4e-154	78.53	F-box protein At4g18380-like OS=Cucurbita moschata OX=3662 GN=LOC111435352 PE=4 ...	[more]
A0A6J1DNC4	1.4e-137	71.66	F-box protein At4g18380-like OS=Momordica charantia OX=3673 GN=LOC111021606 PE=4...	[more]
A0A5A7UJD0	1.4e-121	66.57	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002200...	[more]
A0A1S3BP50	1.4e-121	66.57	F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1	[more]

BLAST of Sed0004813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18380.1	4.7e-48	37.80	F-box family protein	[more]
AT4G18380.2	4.7e-48	37.80	F-box family protein	[more]
AT1G30200.2	5.7e-46	34.76	F-box family protein	[more]
AT1G30200.1	5.7e-46	34.76	F-box family protein	[more]
AT5G46170.1	1.1e-44	35.32	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 29..61 e-value: 4.2E-6 score: 26.6
None	No IPR available	GENE3D	1.20.1280.50		coord: 11..66 e-value: 1.6E-6 score: 29.8
None	No IPR available	PANTHER	PTHR31215:SF21	FAMILY PROTEIN, PUTATIVE-RELATED	coord: 19..360
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 19..360
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 19..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004813.1	Sed0004813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding