Sed0004737 (gene) Chayote v1

Overview


Name	Sed0004737
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GATA transcription factor 19-like
Location	LG13: 8786424 .. 8788559 (+)
RNA-Seq Expression	Sed0004737
Synteny	Sed0004737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCACCACTGCGGCGGCGCCTCTTCGTTTTCCGTCTTCTTGTCGCTGCCCAACCACGGCGGCGCCGCCCATGAGACGGCGGACACTTACTCCGATCATTCTCCTCCTCCTGTGGATTGCACGCTCTCTCTTGGTACTCCCTCCACCCGATCCTCGGAATTCGATTCCGACCAACGCGCCGCCGGATCCCGCCATCACCGCCGGTCCGCCGGTTCCTACGTCTCTAACTTTTGCTGGGATTTGTTGCATCCTAAACACAGGAGTGCTGCCCGTTGCGGCGGAGGGAATAACAACGCCGCCGTGGCATCCGGTGGCGATCCGCTTGTCGCTCGGCGTTGTGCTAACTGCGACACCACTTCTACTCCGCTTTGGAGAAATGGGCCGCGTGGCCCTAAGGTAATTAAATCGCGTTACTTTCTAATTGTGTATTTTATTTCTATATTGGGAAAAAAGTATACTCCAGTTTCACTAATATTTGAAGGCATTTTTTAGAATAATTTAATGAAATGGGTTTGATCAATGTAATTTTATTTTTTAGTACGATGGAGAAACCAACCATGGATACTTTTGTTTTTGGCTGTAAACTATACTTTTAACTATTTTTTGAGTCTTTCATCAAACTTCGTATCCAAATTTTTTTATCAAATTTAGTTCAACCTCATGATTCAATTTCAAAACTTATTATTCTATTTTTTTTTAGTATACATGAGAAAGAGGGTAGGGACAAATACTGATTTTTAAGATTGAATCTGTAAAGTTGTTATTAAATTAATTTACAATCAAATAATAGAAATCATTGTGCTGCTGACTTAATATTTATTATTCAATTTTTACTAACATAAATCTACAAACTACTTGTTAACCAGGGCCAACGCTGATCCTTAGTAGTTATAAACCATTTGATAGTTAAAGATTGTTTTGTTAAACACATGATATAATATTATTTTCTATATTTTTTACTATATATGTTTCATAATTGATTATATTTTGAAAATTTAAAAATTTTATTTTTGAGATTTATTTGGGAATTCAAAATATAGGGCAAAAACTACAAAATAATTTTATTTTAAAAAATAAAGATAAAATCATTATTAATTGAAACCTAATTAATTCAATCATTCCTTAATTCTTTCGCTCTATTCTTTTCTACAAATTCAAATATACTTTCTTTTTAAATTATTTTTTTAAAAAAATCTAAAATGATTTATACATTCAATCAGATTTTTTAAATAAAAAAAAGGAAAACTTAACTACACATGCACAAGTAGGCAGTCTATACTCAATGTATATGCGACATCATGTGAGCCACACAATTTTATTTTTTATATATAAATTAACCTTTGGTTAAAAATTATGTAGTTCACATGATGTCACATATACATTAAACATGAACTACCTACTTGTCCATGTATAAGTAAGTTTTCCTCGATAAAAAATTCCTAACATGATAACAAATGTTGTGAAGTATTGCTATTAACGATGGAGAATCTCACTATTTTAGTCTCAAATTGATATATTTATTTTTTAAGAATCTCAATTTAAATTTTAGAGCAATAATGTAACCTGAAATTAATTTATTTGAATTAAAAGCATACAAATGGAATGATATCTAATGATTAAGAATTTGACTGCAGTCGCTATGCAATGCATGTGGGATTCGGTTCAAGAAGGAAGAGCGGCGGGCGGCGGCGGCGACGACGGCGACGGTGAACACGGCGGCGGAATCAAACAGCGGGAACTACTATGCGAATTCAACTACCACGTTGGTCCCACACAACTCGTCGCCGGTGGCCACGCAGAAGCTTCCGTTTCTGTCGCCGGCGGCGGCGGCCGTTGACGGAGAATCATTGTTCGTCGGAAACGAAACGGAAAACGGCATGTCGTCGTTCCTGTCTTGGCGGCTTAACGTCACCGATCACCGGCCTAGCCTCGTCCATGACTTCACCAGATAATTCCAAAAATTACAAAACAAAAAAAAAAAATTTAATTTTAATTTTCATTTATATTACGTATTTCTGCTACGAAGATGGCGACCGTTTACAATCCGATTCCTTTTTTCTCTATCCTTTCAATGGGACACAGTGGATTTAAGCTCACATAATTATTATAACTTTATATTACTTTTGCTTTTGC

mRNA sequence

ATGATGCACCACTGCGGCGGCGCCTCTTCGTTTTCCGTCTTCTTGTCGCTGCCCAACCACGGCGGCGCCGCCCATGAGACGGCGGACACTTACTCCGATCATTCTCCTCCTCCTGTGGATTGCACGCTCTCTCTTGGTACTCCCTCCACCCGATCCTCGGAATTCGATTCCGACCAACGCGCCGCCGGATCCCGCCATCACCGCCGGTCCGCCGGTTCCTACGTCTCTAACTTTTGCTGGGATTTGTTGCATCCTAAACACAGGAGTGCTGCCCGTTGCGGCGGAGGGAATAACAACGCCGCCGTGGCATCCGGTGGCGATCCGCTTGTCGCTCGGCGTTGTGCTAACTGCGACACCACTTCTACTCCGCTTTGGAGAAATGGGCCGCGTGGCCCTAAGTCGCTATGCAATGCATGTGGGATTCGGTTCAAGAAGGAAGAGCGGCGGGCGGCGGCGGCGACGACGGCGACGGTGAACACGGCGGCGGAATCAAACAGCGGGAACTACTATGCGAATTCAACTACCACGTTGGTCCCACACAACTCGTCGCCGGTGGCCACGCAGAAGCTTCCGTTTCTGTCGCCGGCGGCGGCGGCCGTTGACGGAGAATCATTGTTCGTCGGAAACGAAACGGAAAACGGCATGTCGTCGTTCCTGTCTTGGCGGCTTAACGTCACCGATCACCGGCCTAGCCTCGTCCATGACTTCACCAGATAATTCCAAAAATTACAAAACAAAAAAAAAAAATTTAATTTTAATTTTCATTTATATTACGTATTTCTGCTACGAAGATGGCGACCGTTTACAATCCGATTCCTTTTTTCTCTATCCTTTCAATGGGACACAGTGGATTTAAGCTCACATAATTATTATAACTTTATATTACTTTTGCTTTTGC

Coding sequence (CDS)

ATGATGCACCACTGCGGCGGCGCCTCTTCGTTTTCCGTCTTCTTGTCGCTGCCCAACCACGGCGGCGCCGCCCATGAGACGGCGGACACTTACTCCGATCATTCTCCTCCTCCTGTGGATTGCACGCTCTCTCTTGGTACTCCCTCCACCCGATCCTCGGAATTCGATTCCGACCAACGCGCCGCCGGATCCCGCCATCACCGCCGGTCCGCCGGTTCCTACGTCTCTAACTTTTGCTGGGATTTGTTGCATCCTAAACACAGGAGTGCTGCCCGTTGCGGCGGAGGGAATAACAACGCCGCCGTGGCATCCGGTGGCGATCCGCTTGTCGCTCGGCGTTGTGCTAACTGCGACACCACTTCTACTCCGCTTTGGAGAAATGGGCCGCGTGGCCCTAAGTCGCTATGCAATGCATGTGGGATTCGGTTCAAGAAGGAAGAGCGGCGGGCGGCGGCGGCGACGACGGCGACGGTGAACACGGCGGCGGAATCAAACAGCGGGAACTACTATGCGAATTCAACTACCACGTTGGTCCCACACAACTCGTCGCCGGTGGCCACGCAGAAGCTTCCGTTTCTGTCGCCGGCGGCGGCGGCCGTTGACGGAGAATCATTGTTCGTCGGAAACGAAACGGAAAACGGCATGTCGTCGTTCCTGTCTTGGCGGCTTAACGTCACCGATCACCGGCCTAGCCTCGTCCATGACTTCACCAGATAA

Protein sequence

MMHHCGGASSFSVFLSLPNHGGAAHETADTYSDHSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAAESNSGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGNETENGMSSFLSWRLNVTDHRPSLVHDFTR

Homology

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BLAST of Sed0004737 vs. NCBI nr
Match: XP_023533953.1 (GATA transcription factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87
Identity = 188/268 (70.15%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 1   MMHHCGG----ASSFSVFLSLPNHGGAAHETADTYSDH--------SPPPVDCTLSLGTP 60
           MMHHCGG    ASSFSVFLS+PNHGGAAH+  D YS++        SP  VDCTLSLGTP
Sbjct: 1   MMHHCGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTP 60

Query: 61  STRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASGGDP 120
           STRSSEFDSD+RAA  RHHRRSAGSYVSNFCWDLLHPKH+SA R    +N AAV S GDP
Sbjct: 61  STRSSEFDSDKRAA-PRHHRRSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSSGDP 120

Query: 121 LVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAESNSG 180
           L+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T  T AAESN+ 
Sbjct: 121 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNH 180

Query: 181 NY-----------YANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN------E 239
           ++           Y NST T VPH+ SPVATQKLP LS  AAA++ ES+F+GN      E
Sbjct: 181 HHLHQHHQMFNGNYTNSTATWVPHH-SPVATQKLPCLS--AAAINNESMFIGNDDVRRTE 240

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BLAST of Sed0004737 vs. NCBI nr
Match: XP_022982306.1 (GATA transcription factor 19-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 9.2e-87
Identity = 190/271 (70.11%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 1   MMHHCGG----ASSFSVFLSLPNHGGAAHETADTYSDH----------SPPPVDCTLSLG 60
           MMHHCGG    ASSFSVFLS+PNHGGAAH+  D YS++          SP  VDCTLSLG
Sbjct: 1   MMHHCGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASGG 120
           TPSTRSSEFDSD+RAA  RHHR SAGSYVSNFCWDLLHPKH+SA R    +N AAV SGG
Sbjct: 61  TPSTRSSEFDSDKRAA-PRHHRHSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSGG 120

Query: 121 DPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAESN 180
           DPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T    AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 ------------SGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN---- 239
                       SGN Y NS+ T VPH+ SPVATQKLP LS AAAA+  ES+F+GN    
Sbjct: 181 NHHHPHQHHQMFSGN-YTNSSATWVPHH-SPVATQKLPCLS-AAAAISNESMFIGNDDVR 240

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BLAST of Sed0004737 vs. NCBI nr
Match: KAG6600583.1 (GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031223.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 187/270 (69.26%), Postives = 205/270 (75.93%), Query Frame = 0


Query: 1   MMHHC-----GGASSFSVFLSLPNHGGAAHETADTYSDH---------SPPPVDCTLSLG 60
           MMHHC     G ASSFSVFLS+PNHGGAAH+  D YS++         SP  VDCTLSLG
Sbjct: 1   MMHHCGAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASGG 120
           TPSTRSSEFDSD+RAA  RHHRRSAGSYVSNFCWDLLHPKH+SA R    +N AAV SGG
Sbjct: 61  TPSTRSSEFDSDKRAA-PRHHRRSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSGG 120

Query: 121 DPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAESN 180
           DPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T    AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 SGNY-----------YANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN----- 239
           + ++           Y NST T VPH+ SPVATQKLP LS  AAA++ ES+F+GN     
Sbjct: 181 NHHHLHQHHQMFNGNYTNSTATWVPHH-SPVATQKLPCLS--AAAINNESMFIGNDDVRR 240

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BLAST of Sed0004737 vs. NCBI nr
Match: XP_022942846.1 (GATA transcription factor 19-like [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 187/271 (69.00%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 1   MMHHCGG-----ASSFSVFLSLPNHGGAAHETADTYSDH----------SPPPVDCTLSL 60
           MMHHCGG     ASSFSVFLS+PNHGGAAH+  D YS++          SP  VDCTLSL
Sbjct: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASG 120
           GTPSTRSSEFDSD+RAA  RHHRRSAGSYVSNFCWDLLHPKH+SA R    +N AAV SG
Sbjct: 61  GTPSTRSSEFDSDKRAA-PRHHRRSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSG 120

Query: 121 GDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAES 180
           GDPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T    AAES
Sbjct: 121 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAES 180

Query: 181 NSGNY-----------YANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN---- 239
           N+ ++           Y NST   VPH+ SPVATQKLP LS  AAA++ ES+F+GN    
Sbjct: 181 NNHHHLHQHHQMFNGNYTNSTAAWVPHH-SPVATQKLPCLS--AAAINNESMFIGNDDVR 240

[Close]

BLAST of Sed0004737 vs. NCBI nr
Match: XP_038875549.1 (GATA transcription factor 18-like [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 5.8e-73
Identity = 170/262 (64.89%), Postives = 188/262 (71.76%), Query Frame = 0


Query: 1   MMHHC----GGASSFSVFLSLPNHGGAAHETADT---YSDHSPPPVDCTLSLGTPSTRSS 60
           MMHH     GGASSFSVFLS+PNHG A   ++ T    S  SP  VDCTLSLGTPSTRSS
Sbjct: 1   MMHHYGGGGGGASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSS 60

Query: 61  EFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNN--AAVASGGDPLVA 120
           EFD+D+RAA   HHRRSAGSYVSNFCWDLLHPKH+++ R     NN  AAV SG DPL+A
Sbjct: 61  EFDADKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRAAAPPNNLTAAVTSGADPLLA 120

Query: 121 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAAESN------ 180
           RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT    +TAAESN      
Sbjct: 121 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN--STAAESNHHHHLH 180

Query: 181 ------SGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN-ETENGMSSF 239
                 +GNY   +++T VP   SP  +QK P LS A          +GN E ENG+ SF
Sbjct: 181 HHPIMFNGNY--TNSSTWVP-QQSPTMSQKHPCLSAA----------IGNDEPENGI-SF 240

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BLAST of Sed0004737 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43
Identity = 128/270 (47.41%), Postives = 148/270 (54.81%), Query Frame = 0


Query: 8   ASSFSVFLSLPNHGGAAHETADTYSDHSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHH 67
           A S+S+  S+ N GG   +  + Y  HS   VDCTLSLGTPSTR  E D  +R + S   
Sbjct: 38  AGSYSMVFSMQN-GGVFEQNGEDY-HHSSSLVDCTLSLGTPSTRLCEEDEKRRRSTS--- 97

Query: 68  RRSAGSYVSNFCWDLLHPKHRSAAR-----------------CGGGNNNAAVASGGDPLV 127
              A S +SNF WDL+H K+ ++                   C GG        GGD L+
Sbjct: 98  -SGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGGGGGDSLL 157

Query: 128 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAA-------- 187
           ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAT  TV  AA        
Sbjct: 158 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYG 217

Query: 188 ESNSG--NYYA------NSTTTLVPHNSSPVATQKLPFLSPA--AAAVDGESLFVGNETE 239
             NSG  NY+A      N+ T    H+S    TQ++P   PA     +D     V N  E
Sbjct: 218 HHNSGYNNYHAATNNNNNNGTPWAHHHS----TQRVPCNYPANEIRFMDDYGSGVANNVE 277

[Close]

BLAST of Sed0004737 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 108/225 (48.00%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 32  SDHSPP--PVDCTLSLGTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRS 91
           S HS P   VDCTLSLGTPSTR    D ++R   S H   + G       WD L     +
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRF--SSHTSDTIG-------WDFL-----N 73

Query: 92  AARCGGGNNNAAVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 151
            ++ GGG        GG  L+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR
Sbjct: 74  GSKKGGG-------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 133

Query: 152 AAAA---------TTATVNTAAESNSGNYYANSTTTLVPHNSSP----VATQKLPFLSPA 211
           A+ A         T A V T     S NYY N+       +SSP      TQ++P+ SPA
Sbjct: 134 ASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYA--SSSPWHHQHNTQRVPYYSPA 193

Query: 212 AAAVDGESLFVGN----ETENGMSSFLSWRLNVTDHRPSLVHDFT 238
               + E  +V +    + +     FLSWRLNV D R  LVHDFT
Sbjct: 194 ----NNEYSYVDDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Sed0004737 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-25
Identity = 96/230 (41.74%), Postives = 123/230 (53.48%), Query Frame = 0


Query: 9   SSFSVFLSLPNHGGAAHETADTYSD-HSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHH 68
           S+FS+F S  N     H   D Y++  S   VDCTLSLGTPSTR  +           HH
Sbjct: 8   SNFSMFFSSEN-DDQNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLDD-----------HH 67

Query: 69  RRSAGSYVSNFCWDL-LHPKHRSAARCGGGNNNAAVASGG-DPLVARRCANCDTTSTPLW 128
           R S+ +  +N   D  +H         GG    ++   GG    + RRCA+CDTTSTPLW
Sbjct: 68  RFSSAN-SNNISGDFYIH---------GGNAKTSSYKKGGVAHSLPRRCASCDTTSTPLW 127

Query: 129 RNGPRGPKSLCNACGIRFKKEERRAAA---ATTATVNTAAE-------SNSGNYYANSTT 188
           RNGP+GPKSLCNACGIRFKKEERRA A     +   ++AAE       +  GNYY++   
Sbjct: 128 RNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHHH 187

Query: 189 TLVPHNSSP----VATQKLPFLSPAAAAVDGESLFVGNETENGMSSFLSW 222
                +SSP      TQ++P+ SP     + E  +V N T    SSF+SW
Sbjct: 188 HYA--SSSPSWAHQNTQRVPYFSPVP---EMEYPYVDNVT---ASSFMSW 207

[Close]

BLAST of Sed0004737 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 91/241 (37.76%), Postives = 115/241 (47.72%), Query Frame = 0


Query: 8   ASSFSVFLSLPN---HGGAAHETADTYSDH-------------SPPPVDCTLSLGTPSTR 67
           +S+FS+F  + N      +  E +  Y DH             S   VDCTLSLGTPS+R
Sbjct: 27  SSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVTTSPSSPSSSSTGSVDCTLSLGTPSSR 86

Query: 68  SSEFDSDQRAAGSRHHRRSAGSY-----VSNFCWDLLHPKH--RSAARCGGGNNNAAVAS 127
            +E      AA + +H     ++      +   WD     +      R   G    A  +
Sbjct: 87  RAE--PVAAAAPAANHGAPVPAHYPSLSAATVSWDATAESYYCGQQGRPATGAAKCAAGA 146

Query: 128 GGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAAES 187
           G D L+ RRCANC T STPLWRNGPRGPKSLCNACGIR+KKEERR AAATT T + AA  
Sbjct: 147 GHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERR-AAATTTTADGAA-- 206

Query: 188 NSGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGNETENGMSSFLSWRLN 226
             G   A          ++P  T      SP            G   E   +++L+WRLN
Sbjct: 207 GCGFITAQRGRGSTAAKAAPAVTTCGEETSPYVVG--------GGGGEVANAAYLAWRLN 254

[Close]

BLAST of Sed0004737 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 92/241 (38.17%), Postives = 117/241 (48.55%), Query Frame = 0


Query: 8   ASSFSVFLSLPN---HGGAAHETADTYSDH-------------SPPPVDCTLSLGTPSTR 67
           +S+FS+F  + N      +  E +  Y DH             S   VDCTLSLGTPS+R
Sbjct: 27  SSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVTTSPSSPSSSSTGSVDCTLSLGTPSSR 86

Query: 68  SSEFDSDQRAAGSRHHRRSAGSY-----VSNFCWDLLHPKH--RSAARCGGGNNNAAVAS 127
            +E      AA + +H     ++      +   WD     +      R   G    A  +
Sbjct: 87  RAE--PVAAAAPAANHGAPVPAHYPSLSAATVSWDATAESYYCGQQGRPATGAAKCAAGA 146

Query: 128 GGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAAES 187
           G D L+ RRCANC T STPLWRNGPRGPKSLCNACGIR+KKEERR AAATT T + AA  
Sbjct: 147 GHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERR-AAATTTTADGAA-- 206

Query: 188 NSGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGNETENGMSSFLSWRLN 226
             G   A          ++P  T      SP      G     G E  +  +++L+WRLN
Sbjct: 207 GCGFITAQRGRGSTAAKAAPAVTTCGEETSPYVVGGGGG----GGEVAD--AAYLAWRLN 256

[Close]

BLAST of Sed0004737 vs. ExPASy TrEMBL
Match: A0A6J1IYZ2 (GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.5e-87
Identity = 190/271 (70.11%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 1   MMHHCGG----ASSFSVFLSLPNHGGAAHETADTYSDH----------SPPPVDCTLSLG 60
           MMHHCGG    ASSFSVFLS+PNHGGAAH+  D YS++          SP  VDCTLSLG
Sbjct: 1   MMHHCGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLG 60

Query: 61  TPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASGG 120
           TPSTRSSEFDSD+RAA  RHHR SAGSYVSNFCWDLLHPKH+SA R    +N AAV SGG
Sbjct: 61  TPSTRSSEFDSDKRAA-PRHHRHSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSGG 120

Query: 121 DPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAESN 180
           DPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T    AAESN
Sbjct: 121 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 180

Query: 181 ------------SGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN---- 239
                       SGN Y NS+ T VPH+ SPVATQKLP LS AAAA+  ES+F+GN    
Sbjct: 181 NHHHPHQHHQMFSGN-YTNSSATWVPHH-SPVATQKLPCLS-AAAAISNESMFIGNDDVR 240

[Close]

BLAST of Sed0004737 vs. ExPASy TrEMBL
Match: A0A6J1FQ08 (GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.8e-87
Identity = 187/271 (69.00%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 1   MMHHCGG-----ASSFSVFLSLPNHGGAAHETADTYSDH----------SPPPVDCTLSL 60
           MMHHCGG     ASSFSVFLS+PNHGGAAH+  D YS++          SP  VDCTLSL
Sbjct: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGGNNNAAVASG 120
           GTPSTRSSEFDSD+RAA  RHHRRSAGSYVSNFCWDLLHPKH+SA R    +N AAV SG
Sbjct: 61  GTPSTRSSEFDSDKRAA-PRHHRRSAGSYVSNFCWDLLHPKHKSAGR-STASNAAAVPSG 120

Query: 121 GDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNT-AAES 180
           GDPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T    AAES
Sbjct: 121 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAES 180

Query: 181 NSGNY-----------YANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGN---- 239
           N+ ++           Y NST   VPH+ SPVATQKLP LS  AAA++ ES+F+GN    
Sbjct: 181 NNHHHLHQHHQMFNGNYTNSTAAWVPHH-SPVATQKLPCLS--AAAINNESMFIGNDDVR 240

[Close]

BLAST of Sed0004737 vs. ExPASy TrEMBL
Match: A0A0A0KY15 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.9e-72
Identity = 171/270 (63.33%), Postives = 189/270 (70.00%), Query Frame = 0


Query: 1   MMHHCGG-----ASSFSVFLSLPNHGGAAHETADT---YSDHSPPPVDCTLSLGTPSTRS 60
           MMHH GG     ASSFSVFLS+PNHG A   ++ T    S  SP  VDCTLSLGTPSTRS
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS 60

Query: 61  SEFDSDQRAAGS---RHHRRSAGSYVSNFCWDLLHPKHRSAARCGGG------NNNAAVA 120
           SEFD D+RAA +    HHRRSAGSYVSNFCWDLLHPKH+++ R GGG      N NAAV+
Sbjct: 61  SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS 120

Query: 121 SGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAAE 180
           +GGDPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT    ++ AE
Sbjct: 121 NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN--SSVAE 180

Query: 181 SNSGNY----------YANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGNE--- 239
           SN  ++          Y NS  T VP    P  TQK P LS A          +GNE   
Sbjct: 181 SNHHHHHHHHPMFNGSYTNS-NTWVP-QQLPATTQKHPCLSAA----------IGNEDVG 240

[Close]

BLAST of Sed0004737 vs. ExPASy TrEMBL
Match: A0A1S3BSF9 (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.9e-70
Identity = 167/267 (62.55%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 1   MMHHC--------GGASSFSVFLSLPNHGGA-------AHETADTYSDHSPPPVDCTLSL 60
           MMHH         GGASSFS+FLS+PNHG A        + ++ + S  SP  VDCTLSL
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRSAARCGGG---NNN--A 120
           GTPSTRSSEFDSD+RAA    HRRSAGSYVSNFCWDLLHPKH+++ R  GG   NNN  A
Sbjct: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120

Query: 121 AVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT----TA 180
           AV++ GDPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT    TA
Sbjct: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180

Query: 181 TVNTAAESNSGNYYANSTTTLVPHNSSPVATQKLPFLSPAAAAVDGESLFVGNE---TEN 239
             N    S     Y NS +T VP    P  TQK P LS A          +GN+    EN
Sbjct: 181 ESNHHHHSMFNGSYTNS-STWVP-QQLPATTQKHPCLSAA----------IGNDDVGPEN 240

[Close]

BLAST of Sed0004737 vs. ExPASy TrEMBL
Match: A0A5D3CZ78 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005010 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.9e-63
Identity = 148/228 (64.91%), Postives = 164/228 (71.93%), Query Frame = 0


Query: 25  HETADTYSDHSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLH 84
           + ++ + S  SP  VDCTLSLGTPSTRSSEFDSD+RAA    HRRSAGSYVSNFCWDLLH
Sbjct: 8   YASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLH 67

Query: 85  PKHRSAARCGGG---NNN--AAVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNAC 144
           PKH+++ R  GG   NNN  AAV++ GDPL+ARRCANCDTTSTPLWRNGPRGPKSLCNAC
Sbjct: 68  PKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNAC 127

Query: 145 GIRFKKEERRAAAAT----TATVNTAAESNSGNYYANSTTTLVPHNSSPVATQKLPFLSP 204
           GIRFKKEERRAAAAT    TA  N    S     Y NS +T VP    P  TQK P LS 
Sbjct: 128 GIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNS-STWVP-QQLPATTQKHPCLSA 187

Query: 205 AAAAVDGESLFVGNE---TENGMSSFLSWRLNV--TDHRPSLVHDFTR 239
           A          +GN+    ENG+ SFLSWRLNV  TDHRP+LVHDFTR
Sbjct: 188 A----------IGNDDVGPENGI-SFLSWRLNVANTDHRPTLVHDFTR 222

[Close]

BLAST of Sed0004737 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 177.9 bits (450), Expect = 9.3e-45
Identity = 128/270 (47.41%), Postives = 148/270 (54.81%), Query Frame = 0


Query: 8   ASSFSVFLSLPNHGGAAHETADTYSDHSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHH 67
           A S+S+  S+ N GG   +  + Y  HS   VDCTLSLGTPSTR  E D  +R + S   
Sbjct: 38  AGSYSMVFSMQN-GGVFEQNGEDY-HHSSSLVDCTLSLGTPSTRLCEEDEKRRRSTS--- 97

Query: 68  RRSAGSYVSNFCWDLLHPKHRSAAR-----------------CGGGNNNAAVASGGDPLV 127
              A S +SNF WDL+H K+ ++                   C GG        GGD L+
Sbjct: 98  -SGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGGGGGDSLL 157

Query: 128 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTATVNTAA-------- 187
           ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAT  TV  AA        
Sbjct: 158 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYG 217

Query: 188 ESNSG--NYYA------NSTTTLVPHNSSPVATQKLPFLSPA--AAAVDGESLFVGNETE 239
             NSG  NY+A      N+ T    H+S    TQ++P   PA     +D     V N  E
Sbjct: 218 HHNSGYNNYHAATNNNNNNGTPWAHHHS----TQRVPCNYPANEIRFMDDYGSGVANNVE 277

[Close]

BLAST of Sed0004737 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 148.3 bits (373), Expect = 7.9e-36
Identity = 108/225 (48.00%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 32  SDHSPP--PVDCTLSLGTPSTRSSEFDSDQRAAGSRHHRRSAGSYVSNFCWDLLHPKHRS 91
           S HS P   VDCTLSLGTPSTR    D ++R   S H   + G       WD L     +
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRF--SSHTSDTIG-------WDFL-----N 73

Query: 92  AARCGGGNNNAAVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 151
            ++ GGG        GG  L+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR
Sbjct: 74  GSKKGGG-------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 133

Query: 152 AAAA---------TTATVNTAAESNSGNYYANSTTTLVPHNSSP----VATQKLPFLSPA 211
           A+ A         T A V T     S NYY N+       +SSP      TQ++P+ SPA
Sbjct: 134 ASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYA--SSSPWHHQHNTQRVPYYSPA 193

Query: 212 AAAVDGESLFVGN----ETENGMSSFLSWRLNVTDHRPSLVHDFT 238
               + E  +V +    + +     FLSWRLNV D R  LVHDFT
Sbjct: 194 ----NNEYSYVDDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Sed0004737 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 96/230 (41.74%), Postives = 123/230 (53.48%), Query Frame = 0


Query: 9   SSFSVFLSLPNHGGAAHETADTYSD-HSPPPVDCTLSLGTPSTRSSEFDSDQRAAGSRHH 68
           S+FS+F S  N     H   D Y++  S   VDCTLSLGTPSTR  +           HH
Sbjct: 8   SNFSMFFSSEN-DDQNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLDD-----------HH 67

Query: 69  RRSAGSYVSNFCWDL-LHPKHRSAARCGGGNNNAAVASGG-DPLVARRCANCDTTSTPLW 128
           R S+ +  +N   D  +H         GG    ++   GG    + RRCA+CDTTSTPLW
Sbjct: 68  RFSSAN-SNNISGDFYIH---------GGNAKTSSYKKGGVAHSLPRRCASCDTTSTPLW 127

Query: 129 RNGPRGPKSLCNACGIRFKKEERRAAA---ATTATVNTAAE-------SNSGNYYANSTT 188
           RNGP+GPKSLCNACGIRFKKEERRA A     +   ++AAE       +  GNYY++   
Sbjct: 128 RNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHHH 187

Query: 189 TLVPHNSSP----VATQKLPFLSPAAAAVDGESLFVGNETENGMSSFLSW 222
                +SSP      TQ++P+ SP     + E  +V N T    SSF+SW
Sbjct: 188 HYA--SSSPSWAHQNTQRVPYFSPVP---EMEYPYVDNVT---ASSFMSW 207

[Close]

BLAST of Sed0004737 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-13
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 110 VARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATTAT 158
           V R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A  TAT
Sbjct: 197 VIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATAT 244

[Close]

BLAST of Sed0004737 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 94  GGGNNNAAVASGGDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA 153
           G  NNN          V R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AA
Sbjct: 221 GYSNNNG---------VIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 274

Query: 154 TTA 157
             A
Sbjct: 281 AAA 274

The following BLAST results are available for this feature:

BLAST of Sed0004737 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533953.1	1.9e-87	70.15	GATA transcription factor 19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982306.1	9.2e-87	70.11	GATA transcription factor 19-like [Cucurbita maxima]	[more]
KAG6600583.1	1.2e-86	69.26	GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022942846.1	1.2e-86	69.00	GATA transcription factor 19-like [Cucurbita moschata]	[more]
XP_038875549.1	5.8e-73	64.89	GATA transcription factor 18-like [Benincasa hispida]	[more]

BLAST of Sed0004737 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC79	1.3e-43	47.41	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
Q6QPM2	1.1e-34	48.00	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
Q9ZPX0	3.6e-25	41.74	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]
B8AX51	2.0e-23	37.76	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	2.0e-23	38.17	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]

BLAST of Sed0004737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IYZ2	4.5e-87	70.11	GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE...	[more]
A0A6J1FQ08	5.8e-87	69.00	GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 ...	[more]
A0A0A0KY15	6.9e-72	63.33	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 P...	[more]
A0A1S3BSF9	2.9e-70	62.55	GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 S...	[more]
A0A5D3CZ78	5.9e-63	64.91	GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Sed0004737 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50870.1	9.3e-45	47.41	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	7.9e-36	48.00	GATA transcription factor 19	[more]
AT2G18380.1	2.6e-26	41.74	GATA transcription factor 20	[more]
AT4G26150.1	3.2e-13	68.75	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	2.1e-12	57.14	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 108..159 e-value: 5.8E-18 score: 75.7
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 114..148 e-value: 5.6E-18 score: 64.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 114..139
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 108..144 score: 13.889895
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 113..145 e-value: 7.70434E-14 score: 62.005
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 110..168 e-value: 2.6E-16 score: 61.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..68
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 111..149
IPR044272	GATA transcription factor 18/19/20	PANTHER	PTHR46813	GATA TRANSCRIPTION FACTOR 18	coord: 8..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004737.1	Sed0004737.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031969	chloroplast membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding