Sed0004700 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAGCGTAGCTAATCGCCATGCAATAATGCCTCCTCCTCTAGTGTCGACGCTCTCGATAAACCGATATAAATATGTTGAGATTGACGCTTTTCGACCAACCTCACCGGGGCACAGCCCCGGGGTTGGCCACGACGGTCCTCCCGGTGCACCGTAG ATGGTTAGCGTAGCTAATCGCCATGCAATAATGCCTCCTCCTCTAGTGTCGACGCTCTCGATAAACCGATATAAATATGTTGAGATTGACGCTTTTCGACCAACCTCACCGGGGCACAGCCCCGGGGTTGGCCACGACGGTCCTCCCGGTGCACCGTAG ATGGTTAGCGTAGCTAATCGCCATGCAATAATGCCTCCTCCTCTAGTGTCGACGCTCTCGATAAACCGATATAAATATGTTGAGATTGACGCTTTTCGACCAACCTCACCGGGGCACAGCCCCGGGGTTGGCCACGACGGTCCTCCCGGTGCACCGTAG MVSVANRHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP Homology
BLAST of Sed0004700 vs. NCBI nr
Match: KAG6608019.1 (Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13 Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Sed0004700 vs. NCBI nr
Match: KAG6591857.1 (Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10 Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Sed0004700 vs. NCBI nr
Match: OMP07954.1 (hypothetical protein CCACVL1_01186 [Corchorus capsularis]) HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of Sed0004700 vs. NCBI nr
Match: OAY29952.1 (hypothetical protein MANES_15G184800v8 [Manihot esculenta]) HSP 1 Score: 64.3 bits (155), Expect = 3.5e-07 Identity = 29/40 (72.50%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Sed0004700 vs. NCBI nr
Match: KAF8033451.1 (hypothetical protein BT93_D2151 [Corymbia citriodora subsp. variegata]) HSP 1 Score: 63.2 bits (152), Expect = 7.9e-07 Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy Swiss-Prot
Match: Q3EBM6 (Precursor of CEP4 OS=Arabidopsis thaliana OX=3702 GN=CEP4 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 7.6e-05 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy TrEMBL
Match: A0A0A0KWX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G244900 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-10 Identity = 37/50 (74.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy TrEMBL
Match: A0A1R3KLK5 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01186 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy TrEMBL
Match: A0A2N9H1U7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36368 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07 Identity = 32/44 (72.73%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy TrEMBL
Match: A0A2C9UJ23 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G184800 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07 Identity = 29/40 (72.50%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Sed0004700 vs. ExPASy TrEMBL
Match: A0A5N6L638 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_027045 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Sed0004700 vs. TAIR 10
Match: AT2G35612.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 5.4e-06 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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