Sed0004688 (gene) Chayote v1

Overview
NameSed0004688
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein ATL16
LocationLG02: 50198542 .. 50199601 (-)
RNA-Seq ExpressionSed0004688
SyntenySed0004688
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTTACCCAATTCTTCCCATTCCAATTCCAGCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATCCTCGCCACTGCCTTTTTACTCGTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGCCTCTCTCTGTCTTCACGGCGGCGCCGCCCTCCCTCCGCCGCCCCCTCCCCGCCTGTCCACACCCGCGGCCTCGAAGAATCGCTCATTAGATCGATCCCTTTACTCCAATACAAGAAAGCGAAAACCAGAGGAAAAGGCTCCGCCGAATGCGCCGTTTGTTTGAGCGAATTCGAAGAGGATGAGACCCTGAGGATTATTCCGATTTGTTCCCATCTTTTCCACATCGATTGTATAGATATTTGGCTTCAGAACAATCCCAATTGCCCGCTCTGTCGAACCACCATTTCGAGCTCTGTTCTCTTTCGTGAATTTCCCCTACCATGCTTCTCGCCGGAGAATGCCGCCGCCGCCGGAGATGAGAGGGATTTTGTTGTGATTGAATTGGGTGGGATTGGGACCGACCCATCTGGTCAATTTTCCCAAGAGCGGTTGAATTCTGGGGAATTGCCGGCGGCGGTGGCCTGGAAATTGGAACAGGGGAAGAAGCGGTGGAGGTTGCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGATACGAGGGAGAAAGATGAGCAATTTTGTGTTCAGCCAATTCGACGGTCGGTTTCGATGGATTCGTCGGCGGAGCGGCAGATGTATTTGGCGGTGCAGGCGGCGGTGCAGCAGAGCCGCCGTGGGAATCCGGCGAGTCCCGGCGGCGATGGGTGTAGTGGAAGAGGGAGGAGGTCTTTGTTTTCTTTTGGAAGTGGCCGGAGTTGTAGAAATTAGAATAGGGATTTAGATTTAGATTTAGATTTTGGTTTTTTTATTTTTTTTTGGAGATAGATTAGAAAGTGTTGGGATTTTGAGTGAGATTCAATCAAAAAATTGAACCTTTTTTAATGTATTTATTTGATTGATTTTTTTCAGACAAGCATAA

mRNA sequence

ATGGATTCCTTACCCAATTCTTCCCATTCCAATTCCAGCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATCCTCGCCACTGCCTTTTTACTCGTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGCCTCTCTCTGTCTTCACGGCGGCGCCGCCCTCCCTCCGCCGCCCCCTCCCCGCCTGTCCACACCCGCGGCCTCGAAGAATCGCTCATTAGATCGATCCCTTTACTCCAATACAAGAAAGCGAAAACCAGAGGAAAAGGCTCCGCCGAATGCGCCGTTTGTTTGAGCGAATTCGAAGAGGATGAGACCCTGAGGATTATTCCGATTTGTTCCCATCTTTTCCACATCGATTGTATAGATATTTGGCTTCAGAACAATCCCAATTGCCCGCTCTGTCGAACCACCATTTCGAGCTCTGTTCTCTTTCGTGAATTTCCCCTACCATGCTTCTCGCCGGAGAATGCCGCCGCCGCCGGAGATGAGAGGGATTTTGTTGTGATTGAATTGGGTGGGATTGGGACCGACCCATCTGGTCAATTTTCCCAAGAGCGGTTGAATTCTGGGGAATTGCCGGCGGCGGTGGCCTGGAAATTGGAACAGGGGAAGAAGCGGTGGAGGTTGCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGATACGAGGGAGAAAGATGAGCAATTTTGTGTTCAGCCAATTCGACGGTCGGTTTCGATGGATTCGTCGGCGGAGCGGCAGATGTATTTGGCGGTGCAGGCGGCGGTGCAGCAGAGCCGCCGTGGGAATCCGGCGAGTCCCGGCGGCGATGGGTGTAGTGGAAGAGGGAGGAGACAAGCATAA

Coding sequence (CDS)

ATGGATTCCTTACCCAATTCTTCCCATTCCAATTCCAGCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATCCTCGCCACTGCCTTTTTACTCGTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGCCTCTCTCTGTCTTCACGGCGGCGCCGCCCTCCCTCCGCCGCCCCCTCCCCGCCTGTCCACACCCGCGGCCTCGAAGAATCGCTCATTAGATCGATCCCTTTACTCCAATACAAGAAAGCGAAAACCAGAGGAAAAGGCTCCGCCGAATGCGCCGTTTGTTTGAGCGAATTCGAAGAGGATGAGACCCTGAGGATTATTCCGATTTGTTCCCATCTTTTCCACATCGATTGTATAGATATTTGGCTTCAGAACAATCCCAATTGCCCGCTCTGTCGAACCACCATTTCGAGCTCTGTTCTCTTTCGTGAATTTCCCCTACCATGCTTCTCGCCGGAGAATGCCGCCGCCGCCGGAGATGAGAGGGATTTTGTTGTGATTGAATTGGGTGGGATTGGGACCGACCCATCTGGTCAATTTTCCCAAGAGCGGTTGAATTCTGGGGAATTGCCGGCGGCGGTGGCCTGGAAATTGGAACAGGGGAAGAAGCGGTGGAGGTTGCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGATACGAGGGAGAAAGATGAGCAATTTTGTGTTCAGCCAATTCGACGGTCGGTTTCGATGGATTCGTCGGCGGAGCGGCAGATGTATTTGGCGGTGCAGGCGGCGGTGCAGCAGAGCCGCCGTGGGAATCCGGCGAGTCCCGGCGGCGATGGGTGTAGTGGAAGAGGGAGGAGACAAGCATAA

Protein sequence

MDSLPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRPPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGGIGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQPIRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRRQA
Homology
[Close]
BLAST of Sed0004688 vs. NCBI nr
Match: XP_022942390.1 (RING-H2 finger protein ATL16 [Cucurbita moschata])

HSP 1 Score: 454.9 bits (1169), Expect = 5.2e-124
Identity = 233/285 (81.75%), Postives = 251/285 (88.07%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           P  SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRLSLSSRRRRP
Sbjct: 19  PIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
           P    SPP+HTRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  PPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP +    G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPADPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE PAA A KLEQGKKR +LQKVTSLGDEWIDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECPAA-AGKLEQGKKRRKLQKVTSLGDEWIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRGRR 298

[Close]
BLAST of Sed0004688 vs. NCBI nr
Match: XP_022975064.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 453.8 bits (1166), Expect = 1.2e-123
Identity = 231/285 (81.05%), Postives = 248/285 (87.02%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           PN SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRLSLSSRRRRP
Sbjct: 19  PNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
                SPP+ TRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  APNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP      G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPAEPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE PA    KLEQGKKRW+LQKVTSLGDEWIDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECPATTG-KLEQGKKRWKLQKVTSLGDEWIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRGRR 298

[Close]
BLAST of Sed0004688 vs. NCBI nr
Match: KAG7028833.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.4 bits (1160), Expect = 5.7e-123
Identity = 231/285 (81.05%), Postives = 248/285 (87.02%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           P  SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRLSLSSRRRRP
Sbjct: 19  PIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
           P    SPP+HTRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  PPTTHSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP +    G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPADPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE PA    KLEQGKKR +LQKVTSLGDEWIDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECPATTG-KLEQGKKRRKLQKVTSLGDEWIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCHGRGRR 298

[Close]
BLAST of Sed0004688 vs. NCBI nr
Match: XP_023540628.1 (RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.1 bits (1154), Expect = 2.8e-122
Identity = 231/285 (81.05%), Postives = 249/285 (87.37%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           P  SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRL LSSRRRRP
Sbjct: 19  PIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLPLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
           P   PSPP+HTRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  PPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP +    G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPADPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE P A A KLEQGKKR +LQKVTSLGDE IDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECP-ATAGKLEQGKKRRKLQKVTSLGDESIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRGRR 298

[Close]
BLAST of Sed0004688 vs. NCBI nr
Match: XP_038877360.1 (RING-H2 finger protein ATL16 [Benincasa hispida])

HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-120
Identity = 228/287 (79.44%), Postives = 247/287 (86.06%), Query Frame = 0 

Query: 3   SLPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRR 62
           +LPN SH   SSFPII IAIIGILATA LL+SYYVFVINCCLNWHRIDLLRRLS SS RR
Sbjct: 20  NLPNPSH---SSFPIIVIAIIGILATALLLLSYYVFVINCCLNWHRIDLLRRLSPSSTRR 79

Query: 63  RPPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPI 122
            P   A SP +  RGL++S+IRSIPLLQYKK+  + K S+ECAVCLSEFEEDET+RIIPI
Sbjct: 80  LPSPTAYSPAIENRGLDDSVIRSIPLLQYKKSVPKEKTSSECAVCLSEFEEDETVRIIPI 139

Query: 123 CSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIEL 182
           CSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLF  FPLP  SPE+    G ERDFVVIEL
Sbjct: 140 CSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFHRFPLPSSSPEDPIGGGGERDFVVIEL 199

Query: 183 GGIGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCV 242
           GG   DPSGQFSQ+R +SGELPA    KLEQGKKR +LQKVTSLGDEWIDTR+KDEQFC+
Sbjct: 200 GGNRNDPSGQFSQDRASSGELPAG---KLEQGKKRRKLQKVTSLGDEWIDTRQKDEQFCI 259

Query: 243 QPIRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           QPIRRSVSMDSSAERQMYLAVQAA+QQSRRG+  SPGGDGC+GRGRR
Sbjct: 260 QPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300

[Close]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.4e-71
Identity = 164/312 (52.56%), Postives = 203/312 (65.06%), Query Frame = 0 

Query: 10  SNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRR--RPPSA 69
           S  +SFPI+A+A+IGILATAFLLVSYYVFVI CCLNWHRID+L R SLS RRR  + P  
Sbjct: 29  STGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLM 88

Query: 70  APSPPVHTRGLEESLIRSIPLLQYKKAKTRGKG-------------SAECAVCLSEFEED 129
             SP + +RGL+ES+IR+IP+ ++KK   +  G             S EC+VCLSEF+++
Sbjct: 89  VYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDE 148

Query: 130 ETLRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLF--REFPLPCFSPENAAAAG 189
           E LRIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F       P  SPEN     
Sbjct: 149 EKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR 208

Query: 190 DERDFVVIELG-GIGTDPSGQ------FSQERLNSGEL--------PAAVAWKLEQG--- 249
            E ++VVIELG  IG+D            QER NSG L         +    KL++G   
Sbjct: 209 GENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLP 268

Query: 250 KKRWRLQKVTSLGDEWIDTRE-KDEQF-CVQPIRRSVSMDSSAERQMYLAVQAAVQQSRR 285
           +K  +L K+TS+GDE ID R  KDEQF  +QPIRRS+SMDSSA+RQ+YLAVQ A++++R 
Sbjct: 269 RKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNRE 328

[Close]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-61
Identity = 149/316 (47.15%), Postives = 190/316 (60.13%), Query Frame = 0 

Query: 10  SNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRPPSAAP 69
           S+ ++FPI+AIA+IGILATAFLLVSYY+FVI CCLNWH+ID+ RR   SS +   P    
Sbjct: 36  SSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQN--PLMIY 95

Query: 70  SPPVHTRGLEESLIRSIPLLQYKK------AKTRGKGSAECAVCLSEFEEDETLRIIPIC 129
           SP    RGL+ES IR+IP+ ++KK       + + K S EC+VCL+EF+EDE LRIIP C
Sbjct: 96  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 155

Query: 130 SHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFR--EFPLPCFSPENA-----------AA 189
            H+FHIDCIDIWLQ N NCPLCRT++S    F       P    EN+             
Sbjct: 156 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLV 215

Query: 190 AGDERDFVVIELGGIGTDPSGQF-------SQERLNSGEL-----PAAVA-WKLEQG--- 249
            G + DFVVIELG    +             QER+ S E+     P +V+   ++ G   
Sbjct: 216 LGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRG 275

Query: 250 --KKRWRLQKVTSLGDEWIDTREKDEQFC-VQPIRRSVSMDSSAERQMYLAVQAAVQQSR 288
             KK  +  KVTS+GDE IDTR KD  F  +QPIRRS+SMDSS +RQ+YLAVQ  + +  
Sbjct: 276 MYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRN 335

[Close]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28
Identity = 88/258 (34.11%), Postives = 135/258 (52.33%), Query Frame = 0 

Query: 4   LPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRR 63
           L + S S+SSSF  + IA+IGIL +A +LVSYY  +   C   H+      L+L+     
Sbjct: 43  LDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEG 102

Query: 64  PPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPIC 123
             S+      +  GL ES+I+SI + +YK       GS +C+VCLSEFEE+E+LR++P C
Sbjct: 103 FFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGS-DCSVCLSEFEENESLRLLPKC 162

Query: 124 SHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELG 183
           +H FH+ CID WL+++ NCPLCR  ++                N  A+  +   VV+   
Sbjct: 163 NHAFHLPCIDTWLKSHSNCPLCRAFVT-------------GVNNPTASVGQNVSVVVANQ 222

Query: 184 GIGTDPSGQFSQERLN-------SGELPAAVAWK-LEQGKKRWRLQKVTSLGDEWIDTRE 243
                 +G  S+  LN       +G+  + V  + LE G +    +    L +E  +T++
Sbjct: 223 SNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKD 282

Query: 244 KDEQFCVQPIRRSVSMDS 254
           +D      PIRRSVS++S
Sbjct: 283 EDS----LPIRRSVSLNS 282

[Close]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 7.0e-23
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 0 

Query: 4   LPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHR---------IDLLRR 63
           L +   S+SS F  + IA+IGILA+AF+LVSYY  +   C   HR            + R
Sbjct: 45  LDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSSTSAAAINR 104

Query: 64  LSL------SSRRRRPPSAAPSPPV---HTRGLEESLIRSIPLLQYKKAKTRGKGSAECA 123
           +S       ++      +  P+  +      GL+ESLI+SI + +Y+K     + S++C+
Sbjct: 105 ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-SSDCS 164

Query: 124 VCLSEFEEDETLRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTI--SSSVLFREFPLPCF 183
           VCLSEF+E+E+LR++P C+H FH+ CID WL+++ NCPLCR  I  SS+V   +      
Sbjct: 165 VCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQI 224

Query: 184 SPENAAAAGDERDFVVIELGGIGTDPSGQFSQERLNSGELP 205
             EN + +  +   VV+ L       + +   E +N G  P
Sbjct: 225 VTENNSISTGDDSVVVVNL----DLENSRSRNETVNEGSTP 257

[Close]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 5.0e-21
Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 0 

Query: 6   NSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRR-LSLSSRRRR- 65
           +++ S S ++ +    ++  +   F +V   VF ++    W+ +   RR L   SR RR 
Sbjct: 15  DNNFSGSKTYAMSGKIMLSAIVILFFVVILMVF-LHLYARWYLLRARRRHLRRRSRNRRA 74

Query: 66  -------PPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDET 125
                   PS A +  V +RGL+ ++I+S+P+  +  +    K   ECAVCLSEFEE ET
Sbjct: 75  TMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTF--SDETHKDPIECAVCLSEFEESET 134

Query: 126 LRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERD 185
            R++P C H FH+DCID+W  ++  CPLCR+ + S                   A D   
Sbjct: 135 GRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIES--TAAAREREVVIAVDSDP 194

Query: 186 FVVIE---LGGIGTDPSGQFSQERL--NSGELPAAV 208
            +VIE     G+  +P G  S + L  +SG  PAA+
Sbjct: 195 VLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAI 225

[Close]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match: A0A6J1FW76 (RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.5e-124
Identity = 233/285 (81.75%), Postives = 251/285 (88.07%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           P  SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRLSLSSRRRRP
Sbjct: 19  PIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
           P    SPP+HTRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  PPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP +    G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPADPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE PAA A KLEQGKKR +LQKVTSLGDEWIDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECPAA-AGKLEQGKKRRKLQKVTSLGDEWIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRGRR 298

[Close]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match: A0A6J1IJC3 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.6e-124
Identity = 231/285 (81.05%), Postives = 248/285 (87.02%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           PN SHS+S+SFPIIAIAIIGILATAFLL+SYYVFVINCCLNWHRIDLLRRLSLSSRRRRP
Sbjct: 19  PNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
                SPP+ TRGL+ES+IRSIPL+QYK +  RGK S+EC+VCLSEF EDET+RIIPICS
Sbjct: 79  APNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS LF  FPLP  SP      G+ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPAEPIGGGNERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQ SQER NSGE PA    KLEQGKKRW+LQKVTSLGDEWIDTREKDE+FCVQP
Sbjct: 199 IRNDPSGQLSQERPNSGECPATTG-KLEQGKKRWKLQKVTSLGDEWIDTREKDERFCVQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+    RG+ ASPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRGRR 298

[Close]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match: A0A5D3D010 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001510 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.7e-118
Identity = 227/285 (79.65%), Postives = 241/285 (84.56%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           PN SH   SSFPIIAIAIIGIL TAFLL+SYYVFVINCCLNWHR DL+RRLS SS RR P
Sbjct: 19  PNPSH---SSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTRRLP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
              A SP   TRGL+ES+IRSIPLL YKK+    K  +ECAVCLSEFEEDET+RIIPICS
Sbjct: 79  SPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAVCLSEFEEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRT+ISSSVLF  FPLP  SPE+   AG ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPEDPIGAGGERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQFSQER NS ELPA    KLEQGKK  +LQKVTSLGDEWIDTREKDEQF +QP
Sbjct: 199 IRNDPSGQFSQERANSRELPAV---KLEQGKKWQKLQKVTSLGDEWIDTREKDEQFFIQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+QQSRRG+  SPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRR 297

[Close]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match: A0A1S3AWQ9 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.7e-118
Identity = 227/285 (79.65%), Postives = 241/285 (84.56%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           PN SH   SSFPIIAIAIIGIL TAFLL+SYYVFVINCCLNWHR DL+RRLS SS RR P
Sbjct: 19  PNPSH---SSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTRRLP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
              A SP   TRGL+ES+IRSIPLL YKK+    K  +ECAVCLSEFEEDET+RIIPICS
Sbjct: 79  SPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAVCLSEFEEDETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRT+ISSSVLF  FPLP  SPE+   AG ERDFVVIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPEDPIGAGGERDFVVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I  DPSGQFSQER NS ELPA    KLEQGKK  +LQKVTSLGDEWIDTREKDEQF +QP
Sbjct: 199 IRNDPSGQFSQERANSRELPAV---KLEQGKKWQKLQKVTSLGDEWIDTREKDEQFFIQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMYLAVQAA+QQSRRG+  SPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRR 297

[Close]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match: A0A0A0L8B0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.9e-117
Identity = 223/285 (78.25%), Postives = 240/285 (84.21%), Query Frame = 0 

Query: 5   PNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRP 64
           PN SH   SSFPIIAIAIIGIL TAFLL+SYYVFVINCCLNWHR DL+RRLS SS R  P
Sbjct: 19  PNPSH---SSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTRPLP 78

Query: 65  PSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPICS 124
              A SP +HTRGL+ES+IRSIPLL Y K+    K S+ECAVCLSEF+E ET+RIIPICS
Sbjct: 79  SPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAVCLSEFQEHETVRIIPICS 138

Query: 125 HLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELGG 184
           HLFHIDCIDIWLQNNPNCPLCRTTISSS+LF  FPLP  SPE+  AA  ERDF+VIELGG
Sbjct: 139 HLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPEDPIAAATERDFLVIELGG 198

Query: 185 IGTDPSGQFSQERLNSGELPAAVAWKLEQGKKRWRLQKVTSLGDEWIDTREKDEQFCVQP 244
           I   PSGQFSQER NS ELPA    KLEQGKK  +LQKVTSLGDEWIDTREKDEQFC+QP
Sbjct: 199 IRNHPSGQFSQERANSRELPAV---KLEQGKKWQKLQKVTSLGDEWIDTREKDEQFCIQP 258

Query: 245 IRRSVSMDSSAERQMYLAVQAAVQQSRRGNPASPGGDGCSGRGRR 290
           IRRSVSMDSSAERQMY+AVQAA+QQSR GN  SPGGDGC+GRGRR
Sbjct: 259 IRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRGRR 297

[Close]
BLAST of Sed0004688 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-72
Identity = 164/312 (52.56%), Postives = 203/312 (65.06%), Query Frame = 0 

Query: 10  SNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRR--RPPSA 69
           S  +SFPI+A+A+IGILATAFLLVSYYVFVI CCLNWHRID+L R SLS RRR  + P  
Sbjct: 29  STGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLM 88

Query: 70  APSPPVHTRGLEESLIRSIPLLQYKKAKTRGKG-------------SAECAVCLSEFEED 129
             SP + +RGL+ES+IR+IP+ ++KK   +  G             S EC+VCLSEF+++
Sbjct: 89  VYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDE 148

Query: 130 ETLRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLF--REFPLPCFSPENAAAAG 189
           E LRIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F       P  SPEN     
Sbjct: 149 EKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR 208

Query: 190 DERDFVVIELG-GIGTDPSGQ------FSQERLNSGEL--------PAAVAWKLEQG--- 249
            E ++VVIELG  IG+D            QER NSG L         +    KL++G   
Sbjct: 209 GENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLP 268

Query: 250 KKRWRLQKVTSLGDEWIDTRE-KDEQF-CVQPIRRSVSMDSSAERQMYLAVQAAVQQSRR 285
           +K  +L K+TS+GDE ID R  KDEQF  +QPIRRS+SMDSSA+RQ+YLAVQ A++++R 
Sbjct: 269 RKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNRE 328

[Close]
BLAST of Sed0004688 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-63
Identity = 149/316 (47.15%), Postives = 190/316 (60.13%), Query Frame = 0 

Query: 10  SNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRRPPSAAP 69
           S+ ++FPI+AIA+IGILATAFLLVSYY+FVI CCLNWH+ID+ RR   SS +   P    
Sbjct: 36  SSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQN--PLMIY 95

Query: 70  SPPVHTRGLEESLIRSIPLLQYKK------AKTRGKGSAECAVCLSEFEEDETLRIIPIC 129
           SP    RGL+ES IR+IP+ ++KK       + + K S EC+VCL+EF+EDE LRIIP C
Sbjct: 96  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 155

Query: 130 SHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFR--EFPLPCFSPENA-----------AA 189
            H+FHIDCIDIWLQ N NCPLCRT++S    F       P    EN+             
Sbjct: 156 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLV 215

Query: 190 AGDERDFVVIELGGIGTDPSGQF-------SQERLNSGEL-----PAAVA-WKLEQG--- 249
            G + DFVVIELG    +             QER+ S E+     P +V+   ++ G   
Sbjct: 216 LGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRG 275

Query: 250 --KKRWRLQKVTSLGDEWIDTREKDEQFC-VQPIRRSVSMDSSAERQMYLAVQAAVQQSR 288
             KK  +  KVTS+GDE IDTR KD  F  +QPIRRS+SMDSS +RQ+YLAVQ  + +  
Sbjct: 276 MYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRN 335

[Close]
BLAST of Sed0004688 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 7.9e-30
Identity = 88/258 (34.11%), Postives = 135/258 (52.33%), Query Frame = 0 

Query: 4   LPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRRLSLSSRRRR 63
           L + S S+SSSF  + IA+IGIL +A +LVSYY  +   C   H+      L+L+     
Sbjct: 43  LDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEG 102

Query: 64  PPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDETLRIIPIC 123
             S+      +  GL ES+I+SI + +YK       GS +C+VCLSEFEE+E+LR++P C
Sbjct: 103 FFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGS-DCSVCLSEFEENESLRLLPKC 162

Query: 124 SHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERDFVVIELG 183
           +H FH+ CID WL+++ NCPLCR  ++                N  A+  +   VV+   
Sbjct: 163 NHAFHLPCIDTWLKSHSNCPLCRAFVT-------------GVNNPTASVGQNVSVVVANQ 222

Query: 184 GIGTDPSGQFSQERLN-------SGELPAAVAWK-LEQGKKRWRLQKVTSLGDEWIDTRE 243
                 +G  S+  LN       +G+  + V  + LE G +    +    L +E  +T++
Sbjct: 223 SNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKD 282

Query: 244 KDEQFCVQPIRRSVSMDS 254
           +D      PIRRSVS++S
Sbjct: 283 EDS----LPIRRSVSLNS 282

[Close]
BLAST of Sed0004688 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-24
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 0 

Query: 4   LPNSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHR---------IDLLRR 63
           L +   S+SS F  + IA+IGILA+AF+LVSYY  +   C   HR            + R
Sbjct: 45  LDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSSTSAAAINR 104

Query: 64  LSL------SSRRRRPPSAAPSPPV---HTRGLEESLIRSIPLLQYKKAKTRGKGSAECA 123
           +S       ++      +  P+  +      GL+ESLI+SI + +Y+K     + S++C+
Sbjct: 105 ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-SSDCS 164

Query: 124 VCLSEFEEDETLRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTI--SSSVLFREFPLPCF 183
           VCLSEF+E+E+LR++P C+H FH+ CID WL+++ NCPLCR  I  SS+V   +      
Sbjct: 165 VCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQI 224

Query: 184 SPENAAAAGDERDFVVIELGGIGTDPSGQFSQERLNSGELP 205
             EN + +  +   VV+ L       + +   E +N G  P
Sbjct: 225 VTENNSISTGDDSVVVVNL----DLENSRSRNETVNEGSTP 257

[Close]
BLAST of Sed0004688 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 103.2 bits (256), Expect = 3.6e-22
Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 0 

Query: 6   NSSHSNSSSFPIIAIAIIGILATAFLLVSYYVFVINCCLNWHRIDLLRR-LSLSSRRRR- 65
           +++ S S ++ +    ++  +   F +V   VF ++    W+ +   RR L   SR RR 
Sbjct: 15  DNNFSGSKTYAMSGKIMLSAIVILFFVVILMVF-LHLYARWYLLRARRRHLRRRSRNRRA 74

Query: 66  -------PPSAAPSPPVHTRGLEESLIRSIPLLQYKKAKTRGKGSAECAVCLSEFEEDET 125
                   PS A +  V +RGL+ ++I+S+P+  +  +    K   ECAVCLSEFEE ET
Sbjct: 75  TMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTF--SDETHKDPIECAVCLSEFEESET 134

Query: 126 LRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFREFPLPCFSPENAAAAGDERD 185
            R++P C H FH+DCID+W  ++  CPLCR+ + S                   A D   
Sbjct: 135 GRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIES--TAAAREREVVIAVDSDP 194

Query: 186 FVVIE---LGGIGTDPSGQFSQERL--NSGELPAAV 208
            +VIE     G+  +P G  S + L  +SG  PAA+
Sbjct: 195 VLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAI 225

The following BLAST results are available for this feature:
BLAST of Sed0004688 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942390.15.2e-12481.75RING-H2 finger protein ATL16 [Cucurbita moschata][more]
XP_022975064.11.2e-12381.05RING-H2 finger protein ATL16-like [Cucurbita maxima][more]
KAG7028833.15.7e-12381.05RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_023540628.12.8e-12281.05RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo][more]
XP_038877360.12.7e-12079.44RING-H2 finger protein ATL16 [Benincasa hispida][more]
BLAST of Sed0004688 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LSW92.4e-7152.56RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1[more]
P938231.3e-6147.15RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1[more]
Q9LF641.1e-2834.11RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
Q9SRQ87.0e-2334.39RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2[more]
Q8L9T55.0e-2132.41RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
BLAST of Sed0004688 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FW762.5e-12481.75RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 ... [more]
A0A6J1IJC35.6e-12481.05RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE... [more]
A0A5D3D0102.7e-11879.65RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3AWQ92.7e-11879.65RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1[more]
A0A0A0L8B03.9e-11778.25RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 P... [more]
BLAST of Sed0004688 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G43420.11.7e-7252.56RING/U-box superfamily protein [more]
AT1G04360.19.3e-6347.15RING/U-box superfamily protein [more]
AT5G17600.17.9e-3034.11RING/U-box superfamily protein [more]
AT3G03550.15.0e-2434.39RING/U-box superfamily protein [more]
AT3G16720.13.6e-2232.41TOXICOS EN LEVADURA 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 104..145
e-value: 1.7E-6
score: 37.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 103..146
e-value: 1.5E-12
score: 47.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 104..146
score: 12.459772
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 69..152
e-value: 1.0E-22
score: 81.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..291
NoneNo IPR availablePANTHERPTHR46913:SF1RING-H2 FINGER PROTEIN ATL16coord: 5..290
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 103..146
e-value: 8.88188E-18
score: 73.1049
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 103..152
IPR044600RING-H2 finger protein ATL1/ATL16PANTHERPTHR46913RING-H2 FINGER PROTEIN ATL16coord: 5..290

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004688.1Sed0004688.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016740 transferase activity