Sed0004676 (gene) Chayote v1

Overview


Name	Sed0004676
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proteasome subunit beta
Location	LG03: 42016955 .. 42020393 (-)
RNA-Seq Expression	Sed0004676
Synteny	Sed0004676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGAGGACAAGAAATTGGACTTCGACATTTCTGTAATCATCTTCTTTTCGCAGCAATTTTCTCTCCATTCCGATCATTTCCTTCGACGTTTTGGTTCTCCATTGCTCTACATTTTAAGCTAAAGGTAACGTTGAAGTAGAAAGATCAGTTCATTTTCGAACTTTTGATAGTATTGCAAATTGAAATCAACTTCTATCATTAGGGTTTTGTTGTCGATCTGTTCTTAGTTTAAAATTGCTTGCATTCTGATGATTTTACGGATCTATTTTGATTTCTGATAGAATTCGAGGCGAGGTGCTTTGATTACGATTACATGATTCTATTTTTTTATGCTTAAGCAGCGTCAAGTGTCTTCTGACGTCAGATCGATTAGCTCGACTATTTTGTTATGGACGTGAATGCTTCGATGAGGCGGGGTGCTCTTTATTTAATTTTCGTTGATTGAGTGAATGCTTCGATAAGCCTAAGTCTTCAACCATTGTCCCCGATGGGTGGCATAGTGGTTGAAGACTTGGGTTTTGAAGATTCAACCATTGTCCCTTCAAGGTCCAAGGTTTGAGATTTACGTGTGCCTAGCCCAGGAAGGGGCGTGGCTACCCTTGTTTCGAGAAAATGAAAAAGAATTACCTCAGTCATCAGCATAGTTGGAGGTGTTTCTAGGGATTGTTTTTTCATTTCTAACTTCAAGCTTGATATTTGGCCATCACAGGAGTTGAAACATGAAGCTCGATACCAGTGGTCTTCAAACAACGGCTCCCCTGTTTGGACCAAAAATGGAGATTCTTGAAGGGTTTTCAGCTGCTCCATCGTTCGAGATCCCTAATTCCAGTGACGTAATTTTTAAATCATTTCTTATACTGCTTTCTGGGCTGCATCTTGTTTTGTAGAATTTTCTTTTCTGACTTCTATTTTCTCCGTATTTCAGTTTGATGGCTTTCAGAAAGAGGCCATTCAGATGGTGAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCGCGTGCCAGCATGGGAGGCTATATATGTATGTTTATTTTGTTACATGTATTATCCAAACAAGTTTGAGATTAAATATCTATATATGTTTTGGTTTGGATATCACGAACTATGAAATGCTCATTTAAGTTAGTTTATCCTGTTTAGTGATTGGAGTTTTGTCCCTATAAATAGAATGCTCCGTGCAGCGGGATGCTTTTGTTTATATTTTCCTATTTAGTTTTTTTTTAAAAAAATATCCATAAGTATATGGGGAAACCAGACCATTTTACATGTATCTCGATTATTCTAACGGAACAAATTGCCTGAACCTACAATATTTGGTTGTCGAGGAAATTTGTAGTAAATTAATTCCTAGGCAGATGACCATCCGGGATTAAATCCATAACCTTTTAGTTTTTCAATGCCCTCTCGAAATGACCACTTTGGCCAACCTAGGATCGTTACATTTCATATTTAGCAATATGCCGTTTGCCCTCCTTCCCCCTTCTCTCCTTTAATGTATTTTATTGTGTTTTTATTTGAGTATATTTCTTCATTTTGAACTAAATATTCATTTTTAAAATTTTCAGCATCACAATCTGTGAAGAAAATTATTGAAATCAATCCTTATATGCTTGGCACAATGGCTGGTGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTCAAGGTAACTAGCCAATATACAATTACTTGTACTATACTAACATTAGATCTCTTTGCCTCTAATTTTAGAGTTTTCCAGTGTGGACAATTCAACTTATAAATGTGCAATGAGTTATTTATCCTTCTCTATTTGATTAATTACCTTGCCAAAGTTGAAATTCTGTATTTTCTCGTGTGGTTAGCTGATTTTAGTGTTTAACATGATTTAGTGCCGCCGGCATGAATTAGCAAATAAGCGCCGGATTTCAGTTGCTGGAGCATCAAAATTACTGGCAAACATTCTGTACTCCTACCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGTAATAACATGTTTTCCTCTTTTTTTAAAATGAAAATTTGAATGACAATTATTTATTTTTATTGTATTTTATTTTATTATGATCGATAAATTATCTTCTTCTGTGCATGTTAGGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGTAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTAGATAGTGGGTAAGTTTGATTCTCCATTATCAGGTTTTCTTCAATATATCTCAATCTAGTAATTTTCCCATGAATTTCTTATCACATGTTAAGATGAACAATGTAGTTTTGTAGTAGATTTAGTATGAATGGAGCATATAAAAAATAGTTAAAGAAAGTGAAGAGAACTCGATGGTGTCCACCTTTTTGTGAGTTATGACATTAAACTCGTAATCATGGATATTAAATAAAGGGAAAAATACCTTTTTGTTCTCTGAAAGCTGAATAAGTGCAGTTCATTATTTGTGTGCTTATGGTCATAAGGTTATGAGTATAAATCTCCCACCTCTTGAATTAAAATAAAACTTTTAATTTTGATTATATTTCTTGGTTTTGAAATGCATTAGTCTTTTCCTACTGTGGAGCTAATGCACCACTTTGCAATACCTGATGATGTTAGAGACATTTCTTCAATATCCTTCTGACCTTCTTCTCCTCATTGCCAAACCGTTGTCCATCTTTTCATCTACATTGATTTATGTATATTATTAATTCATGAATACTCTTATCATGTTTCAAAACAGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGATCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGTGGAGTTGCTAGCGGTATTGTTCTGTCTAAATGTTTCCCTTGTGTTTGTAATACTCGAATTCTCTCGACTCATTCGTGATTTGAATGTCATTGATCAGTTTATTATGTGGGACCGAATGGATGGAAAAAGCTATCTGGTGATGATGTAGGAGAACTTCATTACAACTACTATCCAGTGACGCCAACTACACTGGATCAGGAAATGGCTGAAGTAACCATTACTTGAAAATCCCTATATAAACACGAGCAGGTTGAGACATTCTCTATCGAATGTTCACGTATCTGATTTTAAGAGATGCTCTAGATGTGTACTTTTATAAGTATGTGTTCACTCACAGATCCTTAAAAAGTTCGATTGGATCCAGGTTTGGAAATTAGTGCTGCAAGAATCTGTCGTGTTATTTTAGTTATGGCTGCTAGGACATTTTCTATGTTTTCTATATTTTAAATCCATTTCTTCATTGGACTTCTACCTTGTTTTTATGTTTGTGCTTTTCGAATTTAGTAATATCAATATGGTGCATGTGTCTTCAA

mRNA sequence

CTGGAGGACAAGAAATTGGACTTCGACATTTCTGTAATCATCTTCTTTTCGCAGCAATTTTCTCTCCATTCCGATCATTTCCTTCGACGTTTTGGTTCTCCATTGCTCTACATTTTAAGCTAAAGGAGTTGAAACATGAAGCTCGATACCAGTGGTCTTCAAACAACGGCTCCCCTGTTTGGACCAAAAATGGAGATTCTTGAAGGGTTTTCAGCTGCTCCATCGTTCGAGATCCCTAATTCCAGTGACTTTGATGGCTTTCAGAAAGAGGCCATTCAGATGGTGAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCGCGTGCCAGCATGGGAGGCTATATATCATCACAATCTGTGAAGAAAATTATTGAAATCAATCCTTATATGCTTGGCACAATGGCTGGTGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTCAAGTGCCGCCGGCATGAATTAGCAAATAAGCGCCGGATTTCAGTTGCTGGAGCATCAAAATTACTGGCAAACATTCTGTACTCCTACCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGTAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTAGATAGTGGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGATCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGTGGAGTTGCTAGCGTTTATTATGTGGGACCGAATGGATGGAAAAAGCTATCTGGTGATGATGTAGGAGAACTTCATTACAACTACTATCCAGTGACGCCAACTACACTGGATCAGGAAATGGCTGAAGTAACCATTACTTGAAAATCCCTATATAAACACGAGCAGGTTGAGACATTCTCTATCGAATGTTCACGTATCTGATTTTAAGAGATGCTCTAGATGTGTACTTTTATAAGTATGTGTTCACTCACAGATCCTTAAAAAGTTCGATTGGATCCAGGTTTGGAAATTAGTGCTGCAAGAATCTGTCGTGTTATTTTAGTTATGGCTGCTAGGACATTTTCTATGTTTTCTATATTTTAAATCCATTTCTTCATTGGACTTCTACCTTGTTTTTATGTTTGTGCTTTTCGAATTTAGTAATATCAATATGGTGCATGTGTCTTCAA

Coding sequence (CDS)

ATGAAGCTCGATACCAGTGGTCTTCAAACAACGGCTCCCCTGTTTGGACCAAAAATGGAGATTCTTGAAGGGTTTTCAGCTGCTCCATCGTTCGAGATCCCTAATTCCAGTGACTTTGATGGCTTTCAGAAAGAGGCCATTCAGATGGTGAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCGCGTGCCAGCATGGGAGGCTATATATCATCACAATCTGTGAAGAAAATTATTGAAATCAATCCTTATATGCTTGGCACAATGGCTGGTGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTCAAGTGCCGCCGGCATGAATTAGCAAATAAGCGCCGGATTTCAGTTGCTGGAGCATCAAAATTACTGGCAAACATTCTGTACTCCTACCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGTAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTAGATAGTGGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGATCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGTGGAGTTGCTAGCGTTTATTATGTGGGACCGAATGGATGGAAAAAGCTATCTGGTGATGATGTAGGAGAACTTCATTACAACTACTATCCAGTGACGCCAACTACACTGGATCAGGAAATGGCTGAAGTAACCATTACTTGA

Protein sequence

MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTPTTLDQEMAEVTIT

Homology

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BLAST of Sed0004676 vs. NCBI nr
Match: XP_022131817.1 (proteasome subunit beta type-5 [Momordica charantia] >XP_022131818.1 proteasome subunit beta type-5 [Momordica charantia])

HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149
Identity = 265/270 (98.15%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNS+DFDGFQKEAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSNDFDGFQKEAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTP+T+DQEM EVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPSTVDQEMVEVT 270

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BLAST of Sed0004676 vs. NCBI nr
Match: XP_038883961.1 (proteasome subunit beta type-5 isoform X1 [Benincasa hispida])

HSP 1 Score: 538.9 bits (1387), Expect = 2.6e-149
Identity = 264/270 (97.78%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKME LEGF+AAPSFEIPNSSDFDGFQK+AIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEALEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTPTT+DQEMAEVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAEVT 270

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BLAST of Sed0004676 vs. NCBI nr
Match: XP_022961789.1 (proteasome subunit beta type-5-like [Cucurbita moschata] >XP_022997234.1 proteasome subunit beta type-5-like [Cucurbita maxima] >XP_022997235.1 proteasome subunit beta type-5-like [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 3.3e-149
Identity = 263/270 (97.41%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKME +EGF+AAPSFEIPNSSDFDGFQK+AIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEFMEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTPTT+DQEMAEVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAEVT 270

[Close]

BLAST of Sed0004676 vs. NCBI nr
Match: XP_023002169.1 (proteasome subunit beta type-5-B isoform X1 [Cucurbita maxima])

HSP 1 Score: 537.7 bits (1384), Expect = 5.7e-149
Identity = 263/268 (98.13%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQT+APLFGPKMEILEGFSAAPSFE+PNSSDFDGFQKEAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTSAPLFGPKMEILEGFSAAPSFEVPNSSDFDGFQKEAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAE 269
           KLSGDDVGELHYNYYPVTPTT+DQEMAE
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAE 268

[Close]

BLAST of Sed0004676 vs. NCBI nr
Match: XP_023538613.1 (proteasome subunit beta type-5-B isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 537.7 bits (1384), Expect = 5.7e-149
Identity = 263/268 (98.13%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQT+APLFGPKMEILEGFSAAPSFE+PNSSDFDGFQKEAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTSAPLFGPKMEILEGFSAAPSFEVPNSSDFDGFQKEAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAE 269
           KLSGDDVGELHYNYYPVTPTT+DQEMAE
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAE 268

[Close]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot
Match: Q9LIP2 (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana OX=3702 GN=PBE2 PE=1 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.2e-133
Identity = 230/270 (85.19%), Postives = 253/270 (93.70%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPL--FGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTT 60
           MKLDTSGL+TT P+  FG   E+L+GFS+APSF++P ++DFDGFQK+A++MVKPAKGTTT
Sbjct: 1   MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTT 60

Query: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKC 120
           LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KC
Sbjct: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120

Query: 121 RRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 180
           R HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180

Query: 181 TRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNG 240
            RFSVGSGSPYAYGVLDSGY++D+SVEEA+ELARRSIYHATFRDGASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQG 240

Query: 241 WKKLSGDDVGELHYNYYPVTPTTLDQEMAE 269
           W KLSGDDVGELHY+YYPV P T +  M E
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPITAEHVMEE 270

[Close]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot
Match: O24361 (Proteasome subunit beta type-5 OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 3.8e-132
Identity = 223/269 (82.90%), Postives = 249/269 (92.57%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGL++TAP+F     + +G    PSF++PN +DFDGFQKEA+QMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KCR 
Sbjct: 61  FIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISV GASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG R
Sbjct: 121 HELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GY+YD++VEEA+ELARR+IYHAT+RDGASGGV SVY+VGP+GWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEV 270
           K++GDDVG+LH+ YYPV P T++QEM EV
Sbjct: 241 KVTGDDVGDLHFQYYPVVPATVEQEMVEV 269

[Close]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot
Match: O23717 (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana OX=3702 GN=PBE1 PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.0e-128
Identity = 223/272 (81.99%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPL--FGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTT 60
           MKLDTSG +T+ P+  FG   ++L+  S+ PSF++P + +FDGFQK+A  M+K AKGTTT
Sbjct: 1   MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60

Query: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKC 120
           LAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KC
Sbjct: 61  LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120

Query: 121 RRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 180
           R HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180

Query: 181 TRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNG 240
            RFSVGSGSPYAYGVLDSGY+YD+SVEEA+ELARRSIYHATFRDGASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEG 240

Query: 241 WKKLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           W KLSGDDVGELHY+YYPV P T +Q M E T
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPATAEQVMEEAT 272

[Close]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot
Match: O55234 (Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=3)

HSP 1 Score: 290.0 bits (741), Expect = 2.7e-77
Identity = 145/232 (62.50%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 27  AAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
           AAPS+ +P        ++  I+M+    GTTTLAF F  GV+VAADSRA+ G YI+SQ+V
Sbjct: 42  AAPSWGVP--------EEPRIEML---HGTTTLAFKFLHGVIVAADSRATAGAYIASQTV 101

Query: 87  KKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRRHELANKRRISVAGASKLLANILYSYR 146
           KK+IEINPY+LGTMAGGAADC FW R L  +CR +EL NK RISVA ASKLLAN++Y Y+
Sbjct: 102 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 161

Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEE 206
           GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY YDL VEE
Sbjct: 162 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEE 221

Query: 207 AAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVT 259
           A +LARR+IY AT+RD  SGG  ++Y+V  +GW ++S D+V +LH  Y  V+
Sbjct: 222 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262

[Close]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot
Match: P28074 (Proteasome subunit beta type-5 OS=Homo sapiens OX=9606 GN=PSMB5 PE=1 SV=3)

HSP 1 Score: 289.3 bits (739), Expect = 4.6e-77
Identity = 143/233 (61.37%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 27  AAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
           AAP + +P        ++  I+M+    GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42  AAPGWGVP--------EEPGIEML---HGTTTLAFKFRHGVIVAADSRATAGAYIASQTV 101

Query: 87  KKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRRHELANKRRISVAGASKLLANILYSYR 146
           KK+IEINPY+LGTMAGGAADC FW R L  +CR +EL NK RISVA ASKLLAN++Y Y+
Sbjct: 102 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 161

Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEE 206
           GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G  FSVGSGS YAYGV+D GY YDL VE+
Sbjct: 162 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQ 221

Query: 207 AAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTP 260
           A +LARR+IY AT+RD  SGG  ++Y+V  +GW ++S D+V +LH  Y   TP
Sbjct: 222 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263

[Close]

BLAST of Sed0004676 vs. ExPASy TrEMBL
Match: A0A6J1BS30 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111004886 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.5e-150
Identity = 265/270 (98.15%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNS+DFDGFQKEAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSNDFDGFQKEAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTP+T+DQEM EVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPSTVDQEMVEVT 270

[Close]

BLAST of Sed0004676 vs. ExPASy TrEMBL
Match: A0A6J1KAW4 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111492198 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149
Identity = 263/270 (97.41%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKME +EGF+AAPSFEIPNSSDFDGFQK+AIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEFMEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTPTT+DQEMAEVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAEVT 270

[Close]

BLAST of Sed0004676 vs. ExPASy TrEMBL
Match: A0A6J1HF19 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462451 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149
Identity = 263/270 (97.41%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAPLFGPKME +EGF+AAPSFEIPNSSDFDGFQK+AIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPKMEFMEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTPTT+DQEMAEVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAEVT 270

[Close]

BLAST of Sed0004676 vs. ExPASy TrEMBL
Match: A0A6J1KPP5 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496110 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.8e-149
Identity = 263/268 (98.13%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQT+APLFGPKMEILEGFSAAPSFE+PNSSDFDGFQKEAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTSAPLFGPKMEILEGFSAAPSFEVPNSSDFDGFQKEAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAE 269
           KLSGDDVGELHYNYYPVTPTT+DQEMAE
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMAE 268

[Close]

BLAST of Sed0004676 vs. ExPASy TrEMBL
Match: A0A5A7VGZ1 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00430 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 261/270 (96.67%), Postives = 268/270 (99.26%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPLFGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTTLA 60
           MKLDTSGLQTTAP+FGP+ME LEGF+AAPSFEIPNSSDFDGFQK+AIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPMFGPRMEALEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRR 120

Query: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
           HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180

Query: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
           FSVGSGSPYAYGVLD+GYRYDLSVEEAAELARR+IYHATFRDGASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240

Query: 241 KLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           KLSGDDVGELHYNYYPVTPTT+DQEM EVT
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMTEVT 270

[Close]

BLAST of Sed0004676 vs. TAIR 10
Match: AT3G26340.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 477.2 bits (1227), Expect = 8.5e-135
Identity = 230/270 (85.19%), Postives = 253/270 (93.70%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPL--FGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTT 60
           MKLDTSGL+TT P+  FG   E+L+GFS+APSF++P ++DFDGFQK+A++MVKPAKGTTT
Sbjct: 1   MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTT 60

Query: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKC 120
           LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KC
Sbjct: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120

Query: 121 RRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 180
           R HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180

Query: 181 TRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNG 240
            RFSVGSGSPYAYGVLDSGY++D+SVEEA+ELARRSIYHATFRDGASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQG 240

Query: 241 WKKLSGDDVGELHYNYYPVTPTTLDQEMAE 269
           W KLSGDDVGELHY+YYPV P T +  M E
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPITAEHVMEE 270

[Close]

BLAST of Sed0004676 vs. TAIR 10
Match: AT1G13060.1 (20S proteasome beta subunit E1 )

HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-129
Identity = 223/272 (81.99%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPL--FGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTT 60
           MKLDTSG +T+ P+  FG   ++L+  S+ PSF++P + +FDGFQK+A  M+K AKGTTT
Sbjct: 1   MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60

Query: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKC 120
           LAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KC
Sbjct: 61  LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120

Query: 121 RRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 180
           R HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180

Query: 181 TRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNG 240
            RFSVGSGSPYAYGVLDSGY+YD+SVEEA+ELARRSIYHATFRDGASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEG 240

Query: 241 WKKLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           W KLSGDDVGELHY+YYPV P T +Q M E T
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPATAEQVMEEAT 272

[Close]

BLAST of Sed0004676 vs. TAIR 10
Match: AT1G13060.2 (20S proteasome beta subunit E1 )

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-125
Identity = 223/296 (75.34%), Postives = 246/296 (83.11%), Query Frame = 0


Query: 1   MKLDTSGLQTTAPL--FGPKMEILEGFSAAPSFEIPNSSDFDGFQKEAIQMVKPAKGTTT 60
           MKLDTSG +T+ P+  FG   ++L+  S+ PSF++P + +FDGFQK+A  M+K AKGTTT
Sbjct: 1   MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60

Query: 61  LAFIFKEGVMVAADSRASMGGYIS------------------------SQSVKKIIEINP 120
           LAFIFK GVMVAADSRASMGGYIS                        SQSVKKIIEINP
Sbjct: 61  LAFIFKGGVMVAADSRASMGGYISVSSLKNSSKNMHPFDIVDFGRNTTSQSVKKIIEINP 120

Query: 121 YMLGTMAGGAADCQFWHRNLGVKCRRHELANKRRISVAGASKLLANILYSYRGMGLSVGT 180
           YMLGTMAGGAADCQFWHRNLG+KCR HELANKRRISV+GASKLLAN+LYSYRGMGLSVGT
Sbjct: 121 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGT 180

Query: 181 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRS 240
           MIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGY+YD+SVEEA+ELARRS
Sbjct: 181 MIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRS 240

Query: 241 IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTPTTLDQEMAEVT 271
           IYHATFRDGASGGVASVY+VGP GW KLSGDDVGELHY+YYPV P T +Q M E T
Sbjct: 241 IYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEEAT 296

[Close]

BLAST of Sed0004676 vs. TAIR 10
Match: AT4G31300.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-20
Identity = 56/185 (30.27%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 55  GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
           GTT +   +  GV++ ADSR S G Y+++++  KI ++   +    +G AAD Q     +
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71

Query: 115 GVKCRRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
                +H + + +  +V  ++ L+  + Y+ + M L  G ++ GWD+   G  Y    GG
Sbjct: 72  RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGG 131

Query: 175 RLKGTRFSV-GSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYY 234
            +    F++ GSGS Y YG  D  ++ +++ EEA +L  +++  A  RDGASGGV     
Sbjct: 132 TVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVI 191

Query: 235 VGPNG 239
           +   G
Sbjct: 192 INSEG 195

[Close]

BLAST of Sed0004676 vs. TAIR 10
Match: AT4G31300.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-20
Identity = 56/185 (30.27%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 55  GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
           GTT +   +  GV++ ADSR S G Y+++++  KI ++   +    +G AAD Q     +
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71

Query: 115 GVKCRRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
                +H + + +  +V  ++ L+  + Y+ + M L  G ++ GWD+   G  Y    GG
Sbjct: 72  RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGG 131

Query: 175 RLKGTRFSV-GSGSPYAYGVLDSGYRYDLSVEEAAELARRSIYHATFRDGASGGVASVYY 234
            +    F++ GSGS Y YG  D  ++ +++ EEA +L  +++  A  RDGASGGV     
Sbjct: 132 TVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVI 191

Query: 235 VGPNG 239
           +   G
Sbjct: 192 INSEG 195

The following BLAST results are available for this feature:

BLAST of Sed0004676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131817.1	1.1e-149	98.15	proteasome subunit beta type-5 [Momordica charantia] >XP_022131818.1 proteasome ...	[more]
XP_038883961.1	2.6e-149	97.78	proteasome subunit beta type-5 isoform X1 [Benincasa hispida]	[more]
XP_022961789.1	3.3e-149	97.41	proteasome subunit beta type-5-like [Cucurbita moschata] >XP_022997234.1 proteas...	[more]
XP_023002169.1	5.7e-149	98.13	proteasome subunit beta type-5-B isoform X1 [Cucurbita maxima]	[more]
XP_023538613.1	5.7e-149	98.13	proteasome subunit beta type-5-B isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIP2	1.2e-133	85.19	Proteasome subunit beta type-5-B OS=Arabidopsis thaliana OX=3702 GN=PBE2 PE=1 SV...	[more]
O24361	3.8e-132	82.90	Proteasome subunit beta type-5 OS=Spinacia oleracea OX=3562 PE=2 SV=1	[more]
O23717	2.0e-128	81.99	Proteasome subunit beta type-5-A OS=Arabidopsis thaliana OX=3702 GN=PBE1 PE=1 SV...	[more]
O55234	2.7e-77	62.50	Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=3	[more]
P28074	4.6e-77	61.37	Proteasome subunit beta type-5 OS=Homo sapiens OX=9606 GN=PSMB5 PE=1 SV=3	[more]

BLAST of Sed0004676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BS30	5.5e-150	98.15	Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111004886 PE=3 SV=1	[more]
A0A6J1KAW4	1.6e-149	97.41	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111492198 PE=3 SV=1	[more]
A0A6J1HF19	1.6e-149	97.41	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462451 PE=3 SV=1	[more]
A0A6J1KPP5	2.8e-149	98.13	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496110 PE=3 SV=1	[more]
A0A5A7VGZ1	1.4e-148	96.67	Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Sed0004676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26340.1	8.5e-135	85.19	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT1G13060.1	1.4e-129	81.99	20S proteasome beta subunit E1	[more]
AT1G13060.2	1.6e-125	75.34	20S proteasome beta subunit E1	[more]
AT4G31300.1	9.1e-20	30.27	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT4G31300.3	9.1e-20	30.27	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000243	Peptidase T1A, proteasome beta-subunit	PRINTS	PR00141	PROTEASOME	coord: 195..206 score: 51.89 coord: 63..78 score: 58.24 coord: 184..195 score: 71.78 coord: 220..231 score: 53.98
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 56..262 e-value: 5.9E-74 score: 250.5
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 48..254
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 54..234 e-value: 2.5E-48 score: 164.1
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 29..268
None	No IPR available	PANTHER	PTHR11599:SF154	PROTEASOME SUBUNIT BETA	coord: 29..268
None	No IPR available	CDD	cd03761	proteasome_beta_type_5	coord: 56..243 e-value: 1.12165E-131 score: 368.496
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 59..106
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 55..234 score: 55.355846

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004676.1	Sed0004676.1	mRNA
Sed0004676.2	Sed0004676.2	mRNA
Sed0004676.3	Sed0004676.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity