Sed0004651 (gene) Chayote v1

Overview
NameSed0004651
Typegene
OrganismSechium edule (Chayote v1)
Descriptionchloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like
LocationLG06: 39039080 .. 39041911 (-)
RNA-Seq ExpressionSed0004651
SyntenySed0004651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAACTTATTGAATGAAGATTTGGGTTGTAGCTGGGATTCTATCCAAACAACTCGCCCAATTTCAAAATTGCATTCCGAGCAATACGCTCAGTTGTTTGTTCTTCTTCTTCTTCTTCTACGGCGGTAACATCTTCCACAGCTGCTTCTGATCGACAAAAACAACTGCTATATCAACCAAACCATCCAGGTTCGGTCTTTAAGCTTCTTAATCTTTCATAAAACAGCATGATTGTTCATGGGTTTTCTTTTTCCCGGTGTAGGTTTCAATGTTATGTACAGCATCCGTCCAAAATGCTTGCTTATTTTCCAATTCCAGCACTGCCCATTTCCCTTCTCGTCGTTTGGTTCCAACCAGGCTTTGTGTTCGAGCTTCATTGCCGGCTAATGATACTGGCCTCAAAGTGGAGTATACTCCTTGGCTTATTGTTGGTCTGGGCAACCCTGGAAACAAGTATCATGGGACTCGCCACAATGTAATCAAACTTTCTTTATGCCTGTTTTAGAGTATATTTGGGTCGAGGTGGAACTCCAAATTATCTAATATGATATCGTAGCCCGTGTATCGTCTTAGAAAAATGAAATTAAGATTTAATTCAAGATTGGTGAGCCCAAAAGAGAAATCACCTTGAGGGTATTCCACGTCCGAAACAGTGGAGACCTCATAAGAATATATATACATGAGATATGGATTACTTCTCTTGCCACTAATTAGTTTTGAAGTGGAACTTCATACTATTTAATAGTTGGAATGGCACTTAATGACTCTTGGGATTGTGTCCTGTTTAGGTTGGTTTTGAAATGATTGATAGCATTGCTCAGGCGCAGGGTATTTTGATGAACACTATACAATCCAAAGCCCTCATTGGAATAGGTTCGCCTTTTTATTATCCCCCCCCCCCCCCCCATTGAATTTCTCATCTACTGTTGGATTTGAAGCTCATTGAGTTTCCTTAATGATCAGTACAGGTTCAATTGGAGAGGTACCAATTTTGTTGGCAAAGCCTCAGACATACATGAATTTCTGCGGCGAATCGGTTAGTGAGTCATATCTCTTTAGTTTTCTCTTGTTCAATAAACATGGTACACAGCAATCAGAAACTGTTTGTTTATTGCTTATTTGTATAGTGTAACCACATGCTTAGTGTGTGGAGATGTGAAATAATGAGCCATAGAACCAATGTTGCAGTTAACTTCATGTTTTTGTTTTAGTTATCTCTTCACTTCGCTTTTGGTTCTAATTTTTATAGGTTGGACCACTTGCTGTACATTATCAAATACCTTTACGGCACATCTTGTTGGTATTAATTGCAATCTCTTTCTAATCGCTGTTTGCCAACGTTTCAAATGACTAGATTGTAACTATCTGAACATAATTTCCATTTAGGTTTATGATGAAATGAGCTTGCCCAATGGCGTTCTTAGGCTCCAGACAAAAGGAGGACATGGACACCATAATGGGTATGTTGATGAAATATTACTTAATGTAGGTTTCACTTTTATTTTTGTTCTACTCTTAAATTTGTATAATGGTACTCATTTTCACTTTTTCTGACCTTGATGTTGGTTAGGTTTTGTTTGGGAGTACTTTTTGTATAACTCAAAAAACTTTCCACTCAAATCATCATATTTTGGAGTAACATAAATGTATGCTTAAAAGAAAAAACTACTTAAAAGTGCTTCATGGTAAAGCACCTAACGCTTTTGTCTAACCGAAAGCACTTTAAAAACTCTTGTTATTTATCGAACACCAAATACTAAAGTACTTATAATTCAAGTACCCTTTGCCAAAGCACTCTCAAACACACCTTTAGTATGGCACCTTATTGTATTGTATCATATGTTTTATTTGGAGCATGTGCTGGAACTTCTTAGACAATGAGTTTGTGAATCATTAAAAAAGTTCAAGCCCAGTGCTGTGTTTCTTTTCCATTACCCAAGATCTTCGTATTAAATACTTGATGCACATGTTTCTCATTAACAATTTAAATTTTAGACGATTACACATGCAATTTCTTCTCTTATTTGTCATTTTTTAGTTGAAAAATTTATGGTGGCTTGTAAGCTGTGATTGATTTCTCTGGTTATACAGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGCTATGCATCGGTACGTATCTATGTTAACATTTGTTTGAAGATGTTCATAAAGTTTCTATTTCAGGAAGTGTAAACAACTACATTGCTCATGTTATTTTCTAGGAATTGGAAACCCACCAGGGACTATGGACATGAAAGCTTTTCTGCTACAGAAGTTCAGTTCAGTTGAACGCAAACAGGTGAGACTTCCTTTGCATTCTAATGCATTGTTGCATTATGTCGCAATTCGTAATCATACACGACAACGTTTAAATGAATTTTTCTTCCTTTTTTTTTTCCTTCTGTTTCCATATATCATTTTCTTTTTCTTTTTTTTGAAAAAAACAGACACTATTGCATTGTGCAAATTTTTACAACTGTTGTTGGTTCGACTCGAACAGATTGATGCAGCACTTGATCAAGGGGTTGAGGCAGTGAGAACTCTTGCACTGAATGGATTTAGCCAAAGAGTAGACAGATTCAATTTGACCCAGAAATACAAGTATCATAGGGTCTGATCCTTTGGGGTAAAAACCTGTTAAGCTTTGATCATATTTGTAAGATGATCAACTTTTATAAAAATGAATAGGAAGAGGCTGGACGATAATTAATTGTATTTGATCATTATGAATAAGCTATTGATGATTGATTGACTGTTAATAGATCTGTAGGAGAAAACTAAACAGATTAATCACAAGGATATTAACTTAGG

mRNA sequence

AAAAAACTTATTGAATGAAGATTTGGGTTGTAGCTGGGATTCTATCCAAACAACTCGCCCAATTTCAAAATTGCATTCCGAGCAATACGCTCAGTTGTTTGTTCTTCTTCTTCTTCTTCTACGGCGGTAACATCTTCCACAGCTGCTTCTGATCGACAAAAACAACTGCTATATCAACCAAACCATCCAGGTTTCAATGTTATGTACAGCATCCGTCCAAAATGCTTGCTTATTTTCCAATTCCAGCACTGCCCATTTCCCTTCTCGTCGTTTGGTTCCAACCAGGCTTTGTGTTCGAGCTTCATTGCCGGCTAATGATACTGGCCTCAAAGTGGAGTATACTCCTTGGCTTATTGTTGGTCTGGGCAACCCTGGAAACAAGTATCATGGGACTCGCCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAGGCGCAGGGTATTTTGATGAACACTATACAATCCAAAGCCCTCATTGGAATAGGTTCAATTGGAGAGGTACCAATTTTGTTGGCAAAGCCTCAGACATACATGAATTTCTGCGGCGAATCGGTTGGACCACTTGCTGTACATTATCAAATACCTTTACGGCACATCTTGTTGGTTTATGATGAAATGAGCTTGCCCAATGGCGTTCTTAGGCTCCAGACAAAAGGAGGACATGGACACCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAACCCACCAGGGACTATGGACATGAAAGCTTTTCTGCTACAGAAGTTCAGTTCAGTTGAACGCAAACAGATTGATGCAGCACTTGATCAAGGGGTTGAGGCAGTGAGAACTCTTGCACTGAATGGATTTAGCCAAAGAGTAGACAGATTCAATTTGACCCAGAAATACAAGTATCATAGGGTCTGATCCTTTGGGGTAAAAACCTGTTAAGCTTTGATCATATTTGTAAGATGATCAACTTTTATAAAAATGAATAGGAAGAGGCTGGACGATAATTAATTGTATTTGATCATTATGAATAAGCTATTGATGATTGATTGACTGTTAATAGATCTGTAGGAGAAAACTAAACAGATTAATCACAAGGATATTAACTTAGG

Coding sequence (CDS)

ATGTTATGTACAGCATCCGTCCAAAATGCTTGCTTATTTTCCAATTCCAGCACTGCCCATTTCCCTTCTCGTCGTTTGGTTCCAACCAGGCTTTGTGTTCGAGCTTCATTGCCGGCTAATGATACTGGCCTCAAAGTGGAGTATACTCCTTGGCTTATTGTTGGTCTGGGCAACCCTGGAAACAAGTATCATGGGACTCGCCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAGGCGCAGGGTATTTTGATGAACACTATACAATCCAAAGCCCTCATTGGAATAGGTTCAATTGGAGAGGTACCAATTTTGTTGGCAAAGCCTCAGACATACATGAATTTCTGCGGCGAATCGGTTGGACCACTTGCTGTACATTATCAAATACCTTTACGGCACATCTTGTTGGTTTATGATGAAATGAGCTTGCCCAATGGCGTTCTTAGGCTCCAGACAAAAGGAGGACATGGACACCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAACCCACCAGGGACTATGGACATGAAAGCTTTTCTGCTACAGAAGTTCAGTTCAGTTGAACGCAAACAGATTGATGCAGCACTTGATCAAGGGGTTGAGGCAGTGAGAACTCTTGCACTGAATGGATTTAGCCAAAGAGTAGACAGATTCAATTTGACCCAGAAATACAAGTATCATAGGGTCTGA

Protein sequence

MLCTASVQNACLFSNSSTAHFPSRRLVPTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV
Homology
BLAST of Sed0004651 vs. NCBI nr
Match: XP_023523313.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463.8 bits (1192), Expect = 9.4e-127
Identity = 229/248 (92.34%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS AHFPSR   RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. NCBI nr
Match: KAG6607055.1 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS AHFPSR   RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 47  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 106

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 107 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 166

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 167 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 226

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 227 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 286

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 287 QKYKYHKV 294

BLAST of Sed0004651 vs. NCBI nr
Match: XP_022998092.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS+AHFPSR   RLVPTRL VRASL  ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. NCBI nr
Match: XP_022948563.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 461.1 bits (1185), Expect = 6.1e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS AHFPSR   RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. NCBI nr
Match: KAG7036756.1 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461.1 bits (1185), Expect = 6.1e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS AHFPSR   RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match: Q9LF14 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.4e-95
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0

Query: 11  CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
           C     S  HF +++ V      R+C   S    D   KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3   CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62

Query: 71  RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
           RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA 
Sbjct: 63  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122

Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
           HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182

Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match: Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 5.6e-90
Identity = 156/218 (71.56%), Postives = 183/218 (83.94%), Query Frame = 0

Query: 28  PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMN 87
           P    V +S+P    G  VEYTPWLI GLGNPGNKY+GTRHNVGFEM+D IA  +GI MN
Sbjct: 40  PRPFTVVSSVPDPAAG-PVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMN 99

Query: 88  TIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG 147
           TIQSK+L+GIGSIGEVP+L+ KPQ+YMN+ GE++GPLA +YQ+PLRHILL+YD+ SLPNG
Sbjct: 100 TIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNG 159

Query: 148 VLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQ 207
           VLRLQ KGGHG HNG+++V+ HLDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER Q
Sbjct: 160 VLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQ 219

Query: 208 IDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           ID AL+QGV+AVRTL L GFS   +RFNL QKYK+HRV
Sbjct: 220 IDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256

BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match: Q9FKN4 (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.8e-88
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0

Query: 33  VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
           +RASLP +D   LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQS
Sbjct: 33  LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 92

Query: 93  KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
           KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 93  KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 152

Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
           Q KGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D  
Sbjct: 153 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 212

Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           L+QGVE V+TL   GFS  + RFNL QKYK+H+V
Sbjct: 213 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match: Q5ZCL8 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-87
Identity = 156/229 (68.12%), Postives = 187/229 (81.66%), Query Frame = 0

Query: 18  TAHFPSRRL-VPTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 77
           +A  P RR  +  R+ V AS+P +      EYTPWLI GLGNPG+KYHGTRHNVGFEM+D
Sbjct: 32  SAAAPLRRTRLRRRIAVVASVP-DPAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVD 91

Query: 78  SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHIL 137
            IA+ +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLA +YQ+PLRHIL
Sbjct: 92  RIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHIL 151

Query: 138 LVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 197
           ++YDEMSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFL
Sbjct: 152 VMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFL 211

Query: 198 LQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           LQKFSS ER QID AL+QGV+AVRTL L GFS  ++RFNL QKYK+H V
Sbjct: 212 LQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match: Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.1e-65
Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 0

Query: 48  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 107
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 108 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVM 167
           AKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 168 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGF 227
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 228 SQRVDRFNLTQKYKY 243
            +    FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210

BLAST of Sed0004651 vs. ExPASy TrEMBL
Match: A0A6J1K6X4 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492843 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS+AHFPSR   RLVPTRL VRASL  ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. ExPASy TrEMBL
Match: A0A6J1G9M7 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452203 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.0e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML  ASV + CLFSNSS AHFPSR   RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKYH+V
Sbjct: 241 QKYKYHKV 248

BLAST of Sed0004651 vs. ExPASy TrEMBL
Match: A0A6J1D2Z6 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016856 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.8e-123
Identity = 223/248 (89.92%), Postives = 230/248 (92.74%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
           ML   SVQ+ CL SNSS+AHF  R   RLVPTRL VRASL  ND G+KVEYTPWLIVGLG
Sbjct: 1   MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
           RLCIGIGNPPGTMDMKAFLLQKF SVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 240

Query: 241 QKYKYHRV 246
           QKYKY++V
Sbjct: 241 QKYKYNKV 248

BLAST of Sed0004651 vs. ExPASy TrEMBL
Match: A0A1S3CFG5 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 222/250 (88.80%), Postives = 231/250 (92.40%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTAHFPS---RRLVPTRLCVRASLP--ANDTGLKVEYTPWLIVG 60
           ML  AS Q+  LFSNSSTAH+ S   + LV TRL VRASLP   N+ G+KVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LTQKYKYHRV 246
           L+QKYKYH+V
Sbjct: 241 LSQKYKYHKV 250

BLAST of Sed0004651 vs. ExPASy TrEMBL
Match: A0A0A0LCC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 220/249 (88.35%), Postives = 231/249 (92.77%), Query Frame = 0

Query: 1   MLCTASVQNACLFSNSSTA--HFPSRR-LVPTRLCVRASLPANDT-GLKVEYTPWLIVGL 60
           ML  AS Q+  LFSNSS+A  HFPS + LV TRL VRAS P +D+ GLKVEYTPWLIVGL
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60

Query: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120

Query: 121 CGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREF 180
           CGESVGPLA HYQIPLRH+LL YDEM+LPNGVLRLQ K GHGHHNGVKSVMGHLDGRREF
Sbjct: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180

Query: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNL 240
           PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240

Query: 241 TQKYKYHRV 246
           +QKYKYH+V
Sbjct: 241 SQKYKYHKV 249

BLAST of Sed0004651 vs. TAIR 10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0

Query: 11  CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
           C     S  HF +++ V      R+C   S    D   KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3   CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62

Query: 71  RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
           RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA 
Sbjct: 63  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122

Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
           HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182

Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

BLAST of Sed0004651 vs. TAIR 10
Match: AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0

Query: 11  CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
           C     S  HF +++ V      R+C   S    D   KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3   CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62

Query: 71  RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
           RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA 
Sbjct: 63  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122

Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
           HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182

Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

BLAST of Sed0004651 vs. TAIR 10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0

Query: 33  VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
           +RASLP +D   LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQS
Sbjct: 37  LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 96

Query: 93  KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
           KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 97  KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 156

Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
           Q KGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D  
Sbjct: 157 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 216

Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           L+QGVE V+TL   GFS  + RFNL QKYK+H+V
Sbjct: 217 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

BLAST of Sed0004651 vs. TAIR 10
Match: AT5G38290.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0

Query: 33  VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
           +RASLP +D   LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQS
Sbjct: 33  LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 92

Query: 93  KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
           KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 93  KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 152

Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
           Q KGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D  
Sbjct: 153 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 212

Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
           L+QGVE V+TL   GFS  + RFNL QKYK+H+V
Sbjct: 213 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

BLAST of Sed0004651 vs. TAIR 10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.8e-66
Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 0

Query: 48  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 107
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 108 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVM 167
           AKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 168 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGF 227
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 228 SQRVDRFNLTQKYKY 243
            +    FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023523313.19.4e-12792.34chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
KAG6607055.12.7e-12691.94Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, parti... [more]
XP_022998092.14.7e-12691.94chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_022948563.16.1e-12691.53chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
KAG7036756.16.1e-12691.53Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucur... [more]
Match NameE-valueIdentityDescription
Q9LF143.4e-9571.13Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara... [more]
Q9M5P45.6e-9071.56Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m... [more]
Q9FKN41.8e-8872.90Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara... [more]
Q5ZCL81.2e-8768.12Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza... [more]
Q6NLS88.1e-6558.46Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19... [more]
Match NameE-valueIdentityDescription
A0A6J1K6X42.3e-12691.94chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
A0A6J1G9M73.0e-12691.53chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
A0A6J1D2Z66.8e-12389.92chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
A0A1S3CFG53.7e-12188.80chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cuc... [more]
A0A0A0LCC61.2e-11988.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G16140.12.4e-9671.13Peptidyl-tRNA hydrolase family protein [more]
AT5G16140.22.4e-9671.13Peptidyl-tRNA hydrolase family protein [more]
AT5G38290.21.3e-8972.90Peptidyl-tRNA hydrolase family protein [more]
AT5G38290.11.3e-8972.90Peptidyl-tRNA hydrolase family protein [more]
AT5G19830.15.8e-6658.46Peptidyl-tRNA hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 37..228
e-value: 6.9E-66
score: 223.4
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 49..218
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 52..207
e-value: 1.4E-48
score: 163.0
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 52..217
e-value: 1.6E-51
score: 174.8
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 17..207
IPR001328Peptidyl-tRNA hydrolaseHAMAPMF_00083Pept_tRNA_hydro_bactcoord: 50..226
score: 28.131449
NoneNo IPR availablePANTHERPTHR17224:SF3CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-B, CHLOROPLASTICcoord: 17..207
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 156..166
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 63..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004651.1Sed0004651.1mRNA
Sed0004651.2Sed0004651.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity