Homology
BLAST of Sed0004651 vs. NCBI nr
Match:
XP_023523313.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 463.8 bits (1192), Expect = 9.4e-127
Identity = 229/248 (92.34%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS AHFPSR RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. NCBI nr
Match:
KAG6607055.1 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS AHFPSR RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 47 MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 106
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 107 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 166
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 167 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 226
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 227 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 286
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 287 QKYKYHKV 294
BLAST of Sed0004651 vs. NCBI nr
Match:
XP_022998092.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS+AHFPSR RLVPTRL VRASL ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. NCBI nr
Match:
XP_022948563.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 461.1 bits (1185), Expect = 6.1e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS AHFPSR RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. NCBI nr
Match:
KAG7036756.1 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 461.1 bits (1185), Expect = 6.1e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS AHFPSR RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match:
Q9LF14 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)
HSP 1 Score: 349.4 bits (895), Expect = 3.4e-95
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0
Query: 11 CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
C S HF +++ V R+C S D KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3 CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62
Query: 71 RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA
Sbjct: 63 RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122
Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182
Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match:
Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)
HSP 1 Score: 332.0 bits (850), Expect = 5.6e-90
Identity = 156/218 (71.56%), Postives = 183/218 (83.94%), Query Frame = 0
Query: 28 PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMN 87
P V +S+P G VEYTPWLI GLGNPGNKY+GTRHNVGFEM+D IA +GI MN
Sbjct: 40 PRPFTVVSSVPDPAAG-PVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMN 99
Query: 88 TIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG 147
TIQSK+L+GIGSIGEVP+L+ KPQ+YMN+ GE++GPLA +YQ+PLRHILL+YD+ SLPNG
Sbjct: 100 TIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNG 159
Query: 148 VLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQ 207
VLRLQ KGGHG HNG+++V+ HLDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER Q
Sbjct: 160 VLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQ 219
Query: 208 IDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
ID AL+QGV+AVRTL L GFS +RFNL QKYK+HRV
Sbjct: 220 IDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match:
Q9FKN4 (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1)
HSP 1 Score: 327.0 bits (837), Expect = 1.8e-88
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0
Query: 33 VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
+RASLP +D LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A I MNTIQS
Sbjct: 33 LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 92
Query: 93 KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 93 KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 152
Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
Q KGGH HNG+K+V HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D
Sbjct: 153 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 212
Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
L+QGVE V+TL GFS + RFNL QKYK+H+V
Sbjct: 213 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246
BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match:
Q5ZCL8 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)
HSP 1 Score: 324.3 bits (830), Expect = 1.2e-87
Identity = 156/229 (68.12%), Postives = 187/229 (81.66%), Query Frame = 0
Query: 18 TAHFPSRRL-VPTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 77
+A P RR + R+ V AS+P + EYTPWLI GLGNPG+KYHGTRHNVGFEM+D
Sbjct: 32 SAAAPLRRTRLRRRIAVVASVP-DPAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVD 91
Query: 78 SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHIL 137
IA+ +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLA +YQ+PLRHIL
Sbjct: 92 RIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHIL 151
Query: 138 LVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 197
++YDEMSLPNGVLRLQ KGGHG HNG+++VM LD RE PRL IGIG+PPG MD +AFL
Sbjct: 152 VMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFL 211
Query: 198 LQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
LQKFSS ER QID AL+QGV+AVRTL L GFS ++RFNL QKYK+H V
Sbjct: 212 LQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
BLAST of Sed0004651 vs. ExPASy Swiss-Prot
Match:
Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 8.1e-65
Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 0
Query: 48 YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 107
+ PWL +GLGNPG+KY GTRHN+GFEMID A++ GI MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 108 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVM 167
AKPQTYMN GES GPLA +Y++PL +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76 AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135
Query: 168 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGF 227
H G REF RL IGIG PPG MD KAFLLQKFS R+++D AL +GV+A++ + F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195
Query: 228 SQRVDRFNLTQKYKY 243
+ FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210
BLAST of Sed0004651 vs. ExPASy TrEMBL
Match:
A0A6J1K6X4 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492843 PE=3 SV=1)
HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS+AHFPSR RLVPTRL VRASL ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. ExPASy TrEMBL
Match:
A0A6J1G9M7 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452203 PE=3 SV=1)
HSP 1 Score: 461.1 bits (1185), Expect = 3.0e-126
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML ASV + CLFSNSS AHFPSR RLVPTRL VRASLP ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAAL+QGVEAVRTLAL GFS+ VDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
Query: 241 QKYKYHRV 246
QKYKYH+V
Sbjct: 241 QKYKYHKV 248
BLAST of Sed0004651 vs. ExPASy TrEMBL
Match:
A0A6J1D2Z6 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016856 PE=3 SV=1)
HSP 1 Score: 449.9 bits (1156), Expect = 6.8e-123
Identity = 223/248 (89.92%), Postives = 230/248 (92.74%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPSR---RLVPTRLCVRASLPANDTGLKVEYTPWLIVGLG 60
ML SVQ+ CL SNSS+AHF R RLVPTRL VRASL ND G+KVEYTPWLIVGLG
Sbjct: 1 MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLG 60
Query: 61 NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
NPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC
Sbjct: 61 NPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120
Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFP 180
GESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
Query: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLT 240
RLCIGIGNPPGTMDMKAFLLQKF SVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 240
Query: 241 QKYKYHRV 246
QKYKY++V
Sbjct: 241 QKYKYNKV 248
BLAST of Sed0004651 vs. ExPASy TrEMBL
Match:
A0A1S3CFG5 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1)
HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 222/250 (88.80%), Postives = 231/250 (92.40%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTAHFPS---RRLVPTRLCVRASLP--ANDTGLKVEYTPWLIVG 60
ML AS Q+ LFSNSSTAH+ S + LV TRL VRASLP N+ G+KVEYTPWLIVG
Sbjct: 1 MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
Query: 61 LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61 LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
Query: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRRE 180
FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQ KGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFN 240
FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
Query: 241 LTQKYKYHRV 246
L+QKYKYH+V
Sbjct: 241 LSQKYKYHKV 250
BLAST of Sed0004651 vs. ExPASy TrEMBL
Match:
A0A0A0LCC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1)
HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 220/249 (88.35%), Postives = 231/249 (92.77%), Query Frame = 0
Query: 1 MLCTASVQNACLFSNSSTA--HFPSRR-LVPTRLCVRASLPANDT-GLKVEYTPWLIVGL 60
ML AS Q+ LFSNSS+A HFPS + LV TRL VRAS P +D+ GLKVEYTPWLIVGL
Sbjct: 1 MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60
Query: 61 GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 61 GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
Query: 121 CGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREF 180
CGESVGPLA HYQIPLRH+LL YDEM+LPNGVLRLQ K GHGHHNGVKSVMGHLDGRREF
Sbjct: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180
Query: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNL 240
PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAAL+QGVEAVRTLALNGFSQRV+RFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240
Query: 241 TQKYKYHRV 246
+QKYKYH+V
Sbjct: 241 SQKYKYHKV 249
BLAST of Sed0004651 vs. TAIR 10
Match:
AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )
HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0
Query: 11 CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
C S HF +++ V R+C S D KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3 CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62
Query: 71 RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA
Sbjct: 63 RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122
Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182
Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
BLAST of Sed0004651 vs. TAIR 10
Match:
AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )
HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96
Identity = 170/239 (71.13%), Postives = 195/239 (81.59%), Query Frame = 0
Query: 11 CLFSNSSTAHFPSRRLV----PTRLCVRASLPANDTGLKVEYTPWLIVGLGNPGNKYHGT 70
C S HF +++ V R+C S D KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 3 CPTYTPSVYHFQTQKPVFRKQRFRVCSSTS-GGEDDRFKVEYTPWLIVGLGNPGNKYHGT 62
Query: 71 RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAV 130
RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA
Sbjct: 63 RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 122
Query: 131 HYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 190
HY++PLRHIL++YDEM+LPNGVLRLQ KGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 123 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 182
Query: 191 PGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
PG MDMKAFLLQKFS +E+KQI+ AL+QG EAV+TL LNGF+Q + RFNL QKYK+H+V
Sbjct: 183 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
BLAST of Sed0004651 vs. TAIR 10
Match:
AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )
HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0
Query: 33 VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
+RASLP +D LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A I MNTIQS
Sbjct: 37 LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 96
Query: 93 KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 97 KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 156
Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
Q KGGH HNG+K+V HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D
Sbjct: 157 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 216
Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
L+QGVE V+TL GFS + RFNL QKYK+H+V
Sbjct: 217 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250
BLAST of Sed0004651 vs. TAIR 10
Match:
AT5G38290.1 (Peptidyl-tRNA hydrolase family protein )
HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 156/214 (72.90%), Postives = 178/214 (83.18%), Query Frame = 0
Query: 33 VRASLPANDTG-LKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQS 92
+RASLP +D LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A I MNTIQS
Sbjct: 33 LRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQS 92
Query: 93 KALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRL 152
KAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLRL
Sbjct: 93 KALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRL 152
Query: 153 QTKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAA 212
Q KGGH HNG+K+V HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+D
Sbjct: 153 QPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEG 212
Query: 213 LDQGVEAVRTLALNGFSQRVDRFNLTQKYKYHRV 246
L+QGVE V+TL GFS + RFNL QKYK+H+V
Sbjct: 213 LEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246
BLAST of Sed0004651 vs. TAIR 10
Match:
AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )
HSP 1 Score: 248.4 bits (633), Expect = 5.8e-66
Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 0
Query: 48 YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 107
+ PWL +GLGNPG+KY GTRHN+GFEMID A++ GI MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 108 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQTKGGHGHHNGVKSVM 167
AKPQTYMN GES GPLA +Y++PL +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76 AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135
Query: 168 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALDQGVEAVRTLALNGF 227
H G REF RL IGIG PPG MD KAFLLQKFS R+++D AL +GV+A++ + F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195
Query: 228 SQRVDRFNLTQKYKY 243
+ FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023523313.1 | 9.4e-127 | 92.34 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... | [more] |
KAG6607055.1 | 2.7e-126 | 91.94 | Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, parti... | [more] |
XP_022998092.1 | 4.7e-126 | 91.94 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... | [more] |
XP_022948563.1 | 6.1e-126 | 91.53 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... | [more] |
KAG7036756.1 | 6.1e-126 | 91.53 | Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9LF14 | 3.4e-95 | 71.13 | Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara... | [more] |
Q9M5P4 | 5.6e-90 | 71.56 | Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m... | [more] |
Q9FKN4 | 1.8e-88 | 72.90 | Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara... | [more] |
Q5ZCL8 | 1.2e-87 | 68.12 | Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza... | [more] |
Q6NLS8 | 8.1e-65 | 58.46 | Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1K6X4 | 2.3e-126 | 91.94 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... | [more] |
A0A6J1G9M7 | 3.0e-126 | 91.53 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... | [more] |
A0A6J1D2Z6 | 6.8e-123 | 89.92 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... | [more] |
A0A1S3CFG5 | 3.7e-121 | 88.80 | chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cuc... | [more] |
A0A0A0LCC6 | 1.2e-119 | 88.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1 | [more] |