Sed0004597 (gene) Chayote v1

Overview


Name	Sed0004597
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zinc finger, Dof-type
Location	LG11: 24814571 .. 24815504 (-)
RNA-Seq Expression	Sed0004597
Synteny	Sed0004597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCATAAGTGAAGTGAAGTCGGAGTGAGTGAGTGAGTGAGATAGCAATCAAAACCTTGGAACTCGGCGGTGGGTGCCAACATCGTAAACCCAAGCGCTCCAATGCTGTCGGAATCAGCCGCCAACAAAAGCAACCGCAGCCAGAACTCCATGGGGTTCCCTCCCCCGCCCCAGTCGGAGCCCCTCCCGTGCCCCCGCTGCGACTCCCTCACCACCAAATTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCAAGGCGGCACCCTCCGCGACGTCCCTGTCGGGGGCGCCACCCGCAAGAACTCCAAGCGCTCTCGCTATCACAACAACAACATTGCCACCTCCTCTTCCTCTTCCTCCTCTGTTGACATCAACAACCACATCACCATTCCCCTTCCTCCACCTTCCTTCACTTCTCTCCTCACCTCCCACGGCCCCGGCTTCGACGACCTCGCTACCGGACTCTGGGGCTCCGCCTCCACTTACCCTCAAGTCGGGGATCTCCTCGGGCCTCCGGAGACGCCCTCCTGGCAGATGAATGGCGGCGGCGATGGCCATGGAGTTGTGGATGCGGATTTGCTGGGCTGGCCTGATCTTGCCATTTCCATGCAAGGCAGCAACGCCTTCAAGTAGTCTTCTAATTATAAATACACATCAACAACAACTCCATGCTCTCTATTTGTTTCTTTTTAGCTTTCTTTCTGGGTTTTTATCTTTTGTGTTTTTGGTGAATGTTTGTTGGGTATAGAGAGTATAATTGTGAGACTGATAGGATACAGCAAAAATACGACGTCTACTTGGTCGGATATTCACAGCATTCGCCTTTTGGCTCAAATGGTGTCTCTCTCATTTTATTACCCTTTTTTTTCTATATCTTTATTGGGGTTTTCGTCTGC

mRNA sequence

GTCATAAGTGAAGTGAAGTCGGAGTGAGTGAGTGAGTGAGATAGCAATCAAAACCTTGGAACTCGGCGGTGGGTGCCAACATCGTAAACCCAAGCGCTCCAATGCTGTCGGAATCAGCCGCCAACAAAAGCAACCGCAGCCAGAACTCCATGGGGTTCCCTCCCCCGCCCCAGTCGGAGCCCCTCCCGTGCCCCCGCTGCGACTCCCTCACCACCAAATTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCAAGGCGGCACCCTCCGCGACGTCCCTGTCGGGGGCGCCACCCGCAAGAACTCCAAGCGCTCTCGCTATCACAACAACAACATTGCCACCTCCTCTTCCTCTTCCTCCTCTGTTGACATCAACAACCACATCACCATTCCCCTTCCTCCACCTTCCTTCACTTCTCTCCTCACCTCCCACGGCCCCGGCTTCGACGACCTCGCTACCGGACTCTGGGGCTCCGCCTCCACTTACCCTCAAGTCGGGGATCTCCTCGGGCCTCCGGAGACGCCCTCCTGGCAGATGAATGGCGGCGGCGATGGCCATGGAGTTGTGGATGCGGATTTGCTGGGCTGGCCTGATCTTGCCATTTCCATGCAAGGCAGCAACGCCTTCAAGTAGTCTTCTAATTATAAATACACATCAACAACAACTCCATGCTCTCTATTTGTTTCTTTTTAGCTTTCTTTCTGGGTTTTTATCTTTTGTGTTTTTGGTGAATGTTTGTTGGGTATAGAGAGTATAATTGTGAGACTGATAGGATACAGCAAAAATACGACGTCTACTTGGTCGGATATTCACAGCATTCGCCTTTTGGCTCAAATGGTGTCTCTCTCATTTTATTACCCTTTTTTTTCTATATCTTTATTGGGGTTTTCGTCTGC

Coding sequence (CDS)

ATGCTGTCGGAATCAGCCGCCAACAAAAGCAACCGCAGCCAGAACTCCATGGGGTTCCCTCCCCCGCCCCAGTCGGAGCCCCTCCCGTGCCCCCGCTGCGACTCCCTCACCACCAAATTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCAAGGCGGCACCCTCCGCGACGTCCCTGTCGGGGGCGCCACCCGCAAGAACTCCAAGCGCTCTCGCTATCACAACAACAACATTGCCACCTCCTCTTCCTCTTCCTCCTCTGTTGACATCAACAACCACATCACCATTCCCCTTCCTCCACCTTCCTTCACTTCTCTCCTCACCTCCCACGGCCCCGGCTTCGACGACCTCGCTACCGGACTCTGGGGCTCCGCCTCCACTTACCCTCAAGTCGGGGATCTCCTCGGGCCTCCGGAGACGCCCTCCTGGCAGATGAATGGCGGCGGCGATGGCCATGGAGTTGTGGATGCGGATTTGCTGGGCTGGCCTGATCTTGCCATTTCCATGCAAGGCAGCAACGCCTTCAAGTAG

Protein sequence

MLSESAANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSHGPGFDDLATGLWGSASTYPQVGDLLGPPETPSWQMNGGGDGHGVVDADLLGWPDLAISMQGSNAFK

Homology

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BLAST of Sed0004597 vs. NCBI nr
Match: XP_038886095.1 (dof zinc finger protein DOF3.4-like [Benincasa hispida])

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-59
Identity = 143/248 (57.66%), Postives = 159/248 (64.11%), Query Frame = 0


Query: 1   MLSESA--ANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSC 60
           M SESA   N   + Q++MGFPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESANRTNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTQGGTLRDVPVGGATRKNSKRSRYHNNN---------------IATSSSSSSSVD- 120
           RRYWT GGTLRDVPVGG +RKNSKRSRYHN N                +TS+SSSSSV  
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSAPASSSTSVSSSTSASSSSSVSL 120

Query: 121 ------INNHITIPLPPP-SFTSLLTSHGPG-------------------FDD----LAT 180
                 +NN I   +PPP +FTSLL+S   G                   FDD    L  
Sbjct: 121 LPTAAAVNNDINDTIPPPGTFTSLLSSQASGFLALGGYASASASGHPPAAFDDMGFGLGR 180

Query: 181 GLWGSASTYPQVGDLL------GPPETPS-----WQMN---GGGDGHGVVDADLLGWPDL 187
           GLWG+A TYP+VGDL+      G PET S     WQMN   GGG+G GVVD DLLGWPDL
Sbjct: 181 GLWGTACTYPEVGDLVGSYAAAGAPETSSSGYNTWQMNASDGGGNG-GVVDGDLLGWPDL 240

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BLAST of Sed0004597 vs. NCBI nr
Match: XP_023002014.1 (dof zinc finger protein DOF1.6-like [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 6.5e-59
Identity = 135/230 (58.70%), Postives = 152/230 (66.09%), Query Frame = 0


Query: 1   MLSESA-ANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SESA  N++NR Q++M FPPPPQS+P PCPRCDSL TKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSS-------SVDINNHITIPL- 120
           RYWT GGTLRDVPVGG +RKNSKRSRYHN   + SSSSSS       +  + N I + L 
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 ----PPPSFTSLLTSHGPG-------------------FDD----LATGLWGSASTYPQV 180
                P +FTSLL+S GPG                   FD+    L  GLW +A TY +V
Sbjct: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLLGPPETPS-----WQM---NGGGDGHGVVDADLLGWPDLAISMQGSN 187
           GDL+G PET S     WQM   NG G G GVVD DLL WPDLAISMQG +
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKS 230

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BLAST of Sed0004597 vs. NCBI nr
Match: XP_008444659.1 (PREDICTED: dof zinc finger protein DOF1.6-like [Cucumis melo] >KAA0065274.1 dof zinc finger protein DOF1.6-like [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-58
Identity = 141/248 (56.85%), Postives = 159/248 (64.11%), Query Frame = 0


Query: 1   MLSESAANKSNR--SQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSC 60
           M SES+   ++R   Q++MGFPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTQGGTLRDVPVGGATRKNSKRSRYHNNN---------------IATSSSSSSSVD- 120
           RRYWT GGTLRDVPVGG +RKNSKRSRYHN N                +TS+SSSSSV  
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 ------INNHITIPLPPP-SFTSLLTSHGPG-------------------FDD----LAT 180
                 +NN I   +PPP +FTSLL+S   G                   FDD    L  
Sbjct: 121 LPTANALNNDINDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMGFALGR 180

Query: 181 GLWGSASTYPQVGDLL------GPPETPS-----WQMN---GGGDGHGVVDADLLGWPDL 187
           GLWG+A  YP+VGDL+      G PET S     WQMN   GGG+G GVVD DLLGWPDL
Sbjct: 181 GLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDGGGNG-GVVDGDLLGWPDL 240

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BLAST of Sed0004597 vs. NCBI nr
Match: XP_022951825.1 (dof zinc finger protein DOF1.6-like [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 4.2e-58
Identity = 134/229 (58.52%), Postives = 151/229 (65.94%), Query Frame = 0


Query: 1   MLSESA-ANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SESA  N++NR Q++M FPPPPQS+P PCPRCDSL TKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSS------SVDINNHITIPL-- 120
           RYWT GGTLRDVPVGG +RKNSKRSRYHN   + SSSSSS      +  + N I + L  
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLND 120

Query: 121 ---PPPSFTSLLTSHGPG-------------------FDD----LATGLWGSASTYPQVG 180
               P +FTSLL+S G G                   FD+    L  GLW +A TY +VG
Sbjct: 121 TMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVG 180

Query: 181 DLLGPPETPS-----WQM---NGGGDGHGVVDADLLGWPDLAISMQGSN 187
           DL+G PET S     WQM   NG G G GVVD DLL WPDLAISMQG +
Sbjct: 181 DLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKS 229

[Close]

BLAST of Sed0004597 vs. NCBI nr
Match: XP_023547021.1 (dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.6 bits (597), Expect = 7.2e-58
Identity = 142/252 (56.35%), Postives = 159/252 (63.10%), Query Frame = 0


Query: 1   MLSESAANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRR 60
           M SES AN+S+R Q+SM FPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSCRR
Sbjct: 1   MPSES-ANRSSRPQHSMAFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRR 60

Query: 61  YWTQGGTLRDVPVGGATRKNSKRSRYHN-NNIATSSSSSSS------------------- 120
           YWT GGTLRDVPVGG +RKNSKRSRYHN NN  TSSS+S+S                   
Sbjct: 61  YWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTNTSSSASASVSSTSVSSSTSASSSSASL 120

Query: 121 ------------VDINNHITIPLPPPSFTSLLTSHGPG-------------------FDD 180
                       VD+N + T+P  P SFTSLL+S   G                   FDD
Sbjct: 121 LPAPTLNNDINVVDVNLNDTMP-APGSFTSLLSSQASGFLALGGYASASGSGHAPATFDD 180

Query: 181 ----LATGLWGSAS-TYPQVGDLLG------PPETPS---WQMNGGGDGH-GVVDADLLG 187
               L  GLWG+ + TYP+VGDL+G       PET S   WQMN G  G+ GVVD DLLG
Sbjct: 181 MGFALGRGLWGTTTCTYPEVGDLVGSYSAAVAPETSSYNTWQMNAGDGGNSGVVDGDLLG 240

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BLAST of Sed0004597 vs. ExPASy Swiss-Prot
Match: Q9SX97 (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 91/211 (43.13%), Postives = 115/211 (54.50%), Query Frame = 0


Query: 1   MLSESAANKSNRSQ-NSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SE    +  R Q ++  +PPP  +EPLPCPRC+S TTKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSSSV---DINNHITIPLPPPSF 120
           RYWTQGGTLRDVPVGG TR++S +     +  ATSSSSSSSV         T        
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKV 120

Query: 121 TSLLTSHGP----------------------GFDDLATGLWGSAST--YPQVGDLLGPPE 180
           T+L++ HG                       G ++++ G  G +S    P V    G   
Sbjct: 121 TNLISGHGSFASLLGLGSGNGGLDYGFGYGYGLEEMSIGYLGDSSVGEIPVVDGCGG--- 180

Query: 181 TPSWQMNGGGDGHGVVDADLLGWPDLAISMQ 184
             +WQ+   G+  G    D L WP L ISMQ
Sbjct: 181 -DTWQI---GEIEGKSGGDSLIWPGLEISMQ 204

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BLAST of Sed0004597 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 97/240 (40.42%), Postives = 116/240 (48.33%), Query Frame = 0


Query: 15  NSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVG 74
           N +  P   Q E LPCPRCDS  TKFCYYNNYN SQPRHFCK+CRRYWT GGTLRDVPVG
Sbjct: 17  NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVG 76

Query: 75  GATRKNSKRSRYHNNNIATSSSSSSSVDINNHITIPLPPP-------------------- 134
           G TRK++KRSR  +N    SSSSS S  ++N   +PL                       
Sbjct: 77  GGTRKSAKRSRTCSN----SSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTES 136

Query: 135 -----------SFTSLLTSH-----------------------GPGFDDLATGL----W- 187
                      SFTS L +H                       G GFDD++ GL    W 
Sbjct: 137 DGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRAMWP 196

[Close]

BLAST of Sed0004597 vs. ExPASy Swiss-Prot
Match: Q9FGD6 (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 71/154 (46.10%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 21  PPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKN 80
           P  Q E L CPRC+S  TKFCYYNNYN SQPRHFCKSCRRYWT GGTLRD+PVGG +RK+
Sbjct: 25  PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84

Query: 81  SKRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSHGPGFDDLATGLWGSAST 140
           SKRSR +      SS++++SV  + +  +   P  F    ++ G     + T    ++S 
Sbjct: 85  SKRSRTY------SSAATTSVVGSRNFPLQATPVLFPQSSSNGG-----ITTAKGSASSF 144

Query: 141 YPQVGDLLGPPETPSWQMNGGGDGHGVVDADLLG 175
           Y     L+      S   NG G G    DA  LG
Sbjct: 145 YGGFSSLINYNAAVS--RNGPGGGFNGPDAFGLG 165

[Close]

BLAST of Sed0004597 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 22  PPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKNS 81
           PP + PL CPRCDS  TKFCYYNNYNL+QPRHFCK CRRYWTQGG LR+VPVGG  R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 82  KRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSH 124
           K+ +  N N+ +SSSSS         ++    PS   L T+H
Sbjct: 131 KKGK--NGNLKSSSSSSKQSS-----SVNAQSPSSGQLRTNH 165

[Close]

BLAST of Sed0004597 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.4e-25
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 20 PPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRK 79
          P  P+ E L CPRCDS  TKFCYYNNYNLSQPRHFCK+CRRYWT+GG LR++PVGG TRK
Sbjct: 25 PELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84

Query: 80 NSKRS 85
          ++KRS
Sbjct: 85 SNKRS 89

[Close]

BLAST of Sed0004597 vs. ExPASy TrEMBL
Match: A0A6J1KP87 (dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.1e-59
Identity = 135/230 (58.70%), Postives = 152/230 (66.09%), Query Frame = 0


Query: 1   MLSESA-ANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SESA  N++NR Q++M FPPPPQS+P PCPRCDSL TKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSS-------SVDINNHITIPL- 120
           RYWT GGTLRDVPVGG +RKNSKRSRYHN   + SSSSSS       +  + N I + L 
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 ----PPPSFTSLLTSHGPG-------------------FDD----LATGLWGSASTYPQV 180
                P +FTSLL+S GPG                   FD+    L  GLW +A TY +V
Sbjct: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLLGPPETPS-----WQM---NGGGDGHGVVDADLLGWPDLAISMQGSN 187
           GDL+G PET S     WQM   NG G G GVVD DLL WPDLAISMQG +
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKS 230

[Close]

BLAST of Sed0004597 vs. ExPASy TrEMBL
Match: A0A5A7VDC0 (Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006160 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 141/248 (56.85%), Postives = 159/248 (64.11%), Query Frame = 0


Query: 1   MLSESAANKSNR--SQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSC 60
           M SES+   ++R   Q++MGFPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTQGGTLRDVPVGGATRKNSKRSRYHNNN---------------IATSSSSSSSVD- 120
           RRYWT GGTLRDVPVGG +RKNSKRSRYHN N                +TS+SSSSSV  
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 ------INNHITIPLPPP-SFTSLLTSHGPG-------------------FDD----LAT 180
                 +NN I   +PPP +FTSLL+S   G                   FDD    L  
Sbjct: 121 LPTANALNNDINDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMGFALGR 180

Query: 181 GLWGSASTYPQVGDLL------GPPETPS-----WQMN---GGGDGHGVVDADLLGWPDL 187
           GLWG+A  YP+VGDL+      G PET S     WQMN   GGG+G GVVD DLLGWPDL
Sbjct: 181 GLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDGGGNG-GVVDGDLLGWPDL 240

[Close]

BLAST of Sed0004597 vs. ExPASy TrEMBL
Match: A0A1S3BAC9 (dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 141/248 (56.85%), Postives = 159/248 (64.11%), Query Frame = 0


Query: 1   MLSESAANKSNR--SQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSC 60
           M SES+   ++R   Q++MGFPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTQGGTLRDVPVGGATRKNSKRSRYHNNN---------------IATSSSSSSSVD- 120
           RRYWT GGTLRDVPVGG +RKNSKRSRYHN N                +TS+SSSSSV  
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 ------INNHITIPLPPP-SFTSLLTSHGPG-------------------FDD----LAT 180
                 +NN I   +PPP +FTSLL+S   G                   FDD    L  
Sbjct: 121 LPTANALNNDINDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMGFALGR 180

Query: 181 GLWGSASTYPQVGDLL------GPPETPS-----WQMN---GGGDGHGVVDADLLGWPDL 187
           GLWG+A  YP+VGDL+      G PET S     WQMN   GGG+G GVVD DLLGWPDL
Sbjct: 181 GLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDGGGNG-GVVDGDLLGWPDL 240

[Close]

BLAST of Sed0004597 vs. ExPASy TrEMBL
Match: A0A6J1GJZ2 (dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC111454557 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.0e-58
Identity = 134/229 (58.52%), Postives = 151/229 (65.94%), Query Frame = 0


Query: 1   MLSESA-ANKSNRSQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SESA  N++NR Q++M FPPPPQS+P PCPRCDSL TKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSS------SVDINNHITIPL-- 120
           RYWT GGTLRDVPVGG +RKNSKRSRYHN   + SSSSSS      +  + N I + L  
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLND 120

Query: 121 ---PPPSFTSLLTSHGPG-------------------FDD----LATGLWGSASTYPQVG 180
               P +FTSLL+S G G                   FD+    L  GLW +A TY +VG
Sbjct: 121 TMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVG 180

Query: 181 DLLGPPETPS-----WQM---NGGGDGHGVVDADLLGWPDLAISMQGSN 187
           DL+G PET S     WQM   NG G G GVVD DLL WPDLAISMQG +
Sbjct: 181 DLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKS 229

[Close]

BLAST of Sed0004597 vs. ExPASy TrEMBL
Match: A0A0A0LKY9 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.8e-57
Identity = 139/248 (56.05%), Postives = 158/248 (63.71%), Query Frame = 0


Query: 1   MLSESAANKSNR--SQNSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSC 60
           M SES+   ++R   Q++MGFPPPPQS+PLPCPRCDSL TKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTQGGTLRDVPVGGATRKNSKRSRYHNNN---------------IATSSSSSSSVD- 120
           RRYWT GGTLRDVPVGG +RKNSKRSRYHN N                +TS+SSSSSV  
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 ------INNHITIPLPPP-SFTSLLTSHGPG-------------------FDD----LAT 180
                 +N+ I   +P P +FTSLL+S   G                   FDD    L  
Sbjct: 121 LPTANALNSDINDTIPAPGTFTSLLSSQASGFLALGGYASGSGSGHAPAAFDDMGFALGR 180

Query: 181 GLWGSASTYPQVGDLL------GPPETPS-----WQMN---GGGDGHGVVDADLLGWPDL 187
           GLWG+A  YP+VGDL+      G PET S     WQMN   GGG+G GVVD DLLGWPDL
Sbjct: 181 GLWGTACPYPEVGDLVGSYATGGAPETSSSGYNTWQMNANDGGGNG-GVVDGDLLGWPDL 240

[Close]

BLAST of Sed0004597 vs. TAIR 10
Match: AT1G47655.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 91/211 (43.13%), Postives = 115/211 (54.50%), Query Frame = 0


Query: 1   MLSESAANKSNRSQ-NSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCR 60
           M SE    +  R Q ++  +PPP  +EPLPCPRC+S TTKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTQGGTLRDVPVGGATRKNSKRSRYHNNNIATSSSSSSSV---DINNHITIPLPPPSF 120
           RYWTQGGTLRDVPVGG TR++S +     +  ATSSSSSSSV         T        
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKV 120

Query: 121 TSLLTSHGP----------------------GFDDLATGLWGSAST--YPQVGDLLGPPE 180
           T+L++ HG                       G ++++ G  G +S    P V    G   
Sbjct: 121 TNLISGHGSFASLLGLGSGNGGLDYGFGYGYGLEEMSIGYLGDSSVGEIPVVDGCGG--- 180

Query: 181 TPSWQMNGGGDGHGVVDADLLGWPDLAISMQ 184
             +WQ+   G+  G    D L WP L ISMQ
Sbjct: 181 -DTWQI---GEIEGKSGGDSLIWPGLEISMQ 204

[Close]

BLAST of Sed0004597 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 97/240 (40.42%), Postives = 116/240 (48.33%), Query Frame = 0


Query: 15  NSMGFPPPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVG 74
           N +  P   Q E LPCPRCDS  TKFCYYNNYN SQPRHFCK+CRRYWT GGTLRDVPVG
Sbjct: 17  NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVG 76

Query: 75  GATRKNSKRSRYHNNNIATSSSSSSSVDINNHITIPLPPP-------------------- 134
           G TRK++KRSR  +N    SSSSS S  ++N   +PL                       
Sbjct: 77  GGTRKSAKRSRTCSN----SSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTES 136

Query: 135 -----------SFTSLLTSH-----------------------GPGFDDLATGL----W- 187
                      SFTS L +H                       G GFDD++ GL    W 
Sbjct: 137 DGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRAMWP 196

[Close]

BLAST of Sed0004597 vs. TAIR 10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 71/154 (46.10%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 21  PPPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKN 80
           P  Q E L CPRC+S  TKFCYYNNYN SQPRHFCKSCRRYWT GGTLRD+PVGG +RK+
Sbjct: 25  PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84

Query: 81  SKRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSHGPGFDDLATGLWGSAST 140
           SKRSR +      SS++++SV  + +  +   P  F    ++ G     + T    ++S 
Sbjct: 85  SKRSRTY------SSAATTSVVGSRNFPLQATPVLFPQSSSNGG-----ITTAKGSASSF 144

Query: 141 YPQVGDLLGPPETPSWQMNGGGDGHGVVDADLLG 175
           Y     L+      S   NG G G    DA  LG
Sbjct: 145 YGGFSSLINYNAAVS--RNGPGGGFNGPDAFGLG 165

[Close]

BLAST of Sed0004597 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 22  PPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKNS 81
           PP + PL CPRCDS  TKFCYYNNYNL+QPRHFCK CRRYWTQGG LR+VPVGG  R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 82  KRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSH 124
           K+ +  N N+ +SSSSS         ++    PS   L T+H
Sbjct: 131 KKGK--NGNLKSSSSSSKQSS-----SVNAQSPSSGQLRTNH 165

[Close]

BLAST of Sed0004597 vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 22  PPQSEPLPCPRCDSLTTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDVPVGGATRKNS 81
           PP + PL CPRCDS  TKFCYYNNYNL+QPRHFCK CRRYWTQGG LR+VPVGG  R+N+
Sbjct: 15  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 74

Query: 82  KRSRYHNNNIATSSSSSSSVDINNHITIPLPPPSFTSLLTSH 124
           K+ +  N N+ +SSSSS         ++    PS   L T+H
Sbjct: 75  KKGK--NGNLKSSSSSSKQSS-----SVNAQSPSSGQLRTNH 109

The following BLAST results are available for this feature:

BLAST of Sed0004597 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886095.1	2.2e-59	57.66	dof zinc finger protein DOF3.4-like [Benincasa hispida]	[more]
XP_023002014.1	6.5e-59	58.70	dof zinc finger protein DOF1.6-like [Cucurbita maxima]	[more]
XP_008444659.1	2.5e-58	56.85	PREDICTED: dof zinc finger protein DOF1.6-like [Cucumis melo] >KAA0065274.1 dof ...	[more]
XP_022951825.1	4.2e-58	58.52	dof zinc finger protein DOF1.6-like [Cucurbita moschata]	[more]
XP_023547021.1	7.2e-58	56.35	dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004597 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX97	1.7e-33	43.13	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV...	[more]
Q39088	3.1e-32	40.42	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9FGD6	2.0e-26	46.10	Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV...	[more]
Q8L9V6	3.4e-26	57.84	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
O82155	6.4e-25	75.38	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]

BLAST of Sed0004597 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP87	3.1e-59	58.70	dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 ...	[more]
A0A5A7VDC0	1.2e-58	56.85	Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BAC9	1.2e-58	56.85	dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4...	[more]
A0A6J1GJZ2	2.0e-58	58.52	dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC11145455...	[more]
A0A0A0LKY9	3.8e-57	56.05	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE...	[more]

BLAST of Sed0004597 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47655.1	1.2e-34	43.13	Dof-type zinc finger DNA-binding family protein	[more]
AT3G50410.1	2.2e-33	40.42	OBF binding protein 1	[more]
AT5G66940.1	1.4e-27	46.10	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.2	2.4e-27	57.84	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	2.4e-27	57.84	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 27..82 e-value: 1.0E-32 score: 112.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 30..66
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 28..82 score: 28.676903
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31992:SF189	SUBFAMILY NOT NAMED	coord: 9..101
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 9..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004597.1	Sed0004597.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003677	DNA binding