Sed0004596 (gene) Chayote v1

Overview


Name	Sed0004596
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectate lyase
Location	LG08: 28116850 .. 28118251 (-)
RNA-Seq Expression	Sed0004596
Synteny	Sed0004596

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCTGGTTGTAGAATTAAGGTTTTGATGGTACTGGTTTCAATGGCTGTTTTGATACCAACTTTCAGAGCTGGCATTGCTGAATTTGATGATTATTTAGTTGAAAAGGAAGCTGAAGCCAAACAAGATGCTCTTGAGGCTTTCGATTCTGAACCCATGAATGTCACTGAGCATCTCAACCACCAAGTTCATTTGTATGTACAAATCTATCTTTGTTTCCTTTTCTGTTCATGTTCATATTTCCACCATTCACATTTTGTTTGCTTTTTGTATATGCAGACTTTTTGAGGGAAAAAATAACACTAGGAGAAGCTTGAGGAAATATAATGGGCCATGCTTGGCTACAAACCCGATCGACCGTTGCTGGCGATGCGACCCAAACTGGGCCAACAACCGTAAGAAGCTTGCCTCTTGCGTGCTTGGTTTTGGCCGAAAAACCACTGGTGGCTTGAAAGGGCGTTTCTACACCGTGACCGACCCATCCGACGACAATTTTGTAGACCCTAAACCGGGAACCCTCCGACACGCTTGCATTCAAAAGAGGCCGTTGTGGATCATATTTGGGCGAAGCATGATCATCAAGCTGCAAAAGGAGCTCTTGGTGACGAGCCACAAGACTATCGACGCACGCGGTGCCAACGTACATATTGCCTATGGTGCTGGCATTAGCATTCAATATGTCCGAAATGTAATCATCCACGGCCTTCACATCCACCACGTCATCCAAGCTAGTGGTGGCATGATCCGAGACTCCTTCAACCATGTCGGCCTTCGAACCGTCAGCGACGGAGACGGCGTCTCCATCTTCGGATCATCCAACGTATGGCTGGATCACCTTTCCATGTCCAACTGCCAGGACGGATTGATCGACGCAATTCAAGGCTCCACCGCAATCACAATCTCAAACTCTCATTTCACTCATCACAACGACGTGATGTTGTTCGGCGCAAGCGATTCGTACCAAGGGGACTCGATCATGCAAGTGACAGTCGCGTTCAACCATTTCGGAAAGGGATTGATTCAGAGAATGCCAAGGTGCAGATGGGGATTCTTCCATGTAGTTAACAATGACTACACGCACTGGCTGATGTACGCGATCGGCGGGAGCATGCATCCGACGATCATCAGTCAGGGGAACCGATTCATTGCGCCACCAAACCCGGCAGCAAAACAGATTACGAACAGAAACTATGCAACAGAGAGTGTGTGGAAAACATGGACATGGAGATCAGAGGGGGATTTGATGATGAATGGAGCATATTTTGTGCAATCTGGAAATCCAAGCAAAAGAAGGCCATACAGCAGGTTTGATATGATCAGGGCTAAGCCAGGCACTTTTGTTAGAAGGCTCACACGCTTCTCTGGATCACTCAATTGTTACATTGGTCGCCCTTGCTAA

mRNA sequence

ATGATGGCTGGTTGTAGAATTAAGGTTTTGATGGTACTGGTTTCAATGGCTGTTTTGATACCAACTTTCAGAGCTGGCATTGCTGAATTTGATGATTATTTAGTTGAAAAGGAAGCTGAAGCCAAACAAGATGCTCTTGAGGCTTTCGATTCTGAACCCATGAATGTCACTGAGCATCTCAACCACCAAGTTCATTTACTTTTTGAGGGAAAAAATAACACTAGGAGAAGCTTGAGGAAATATAATGGGCCATGCTTGGCTACAAACCCGATCGACCGTTGCTGGCGATGCGACCCAAACTGGGCCAACAACCGTAAGAAGCTTGCCTCTTGCGTGCTTGGTTTTGGCCGAAAAACCACTGGTGGCTTGAAAGGGCGTTTCTACACCGTGACCGACCCATCCGACGACAATTTTGTAGACCCTAAACCGGGAACCCTCCGACACGCTTGCATTCAAAAGAGGCCGTTGTGGATCATATTTGGGCGAAGCATGATCATCAAGCTGCAAAAGGAGCTCTTGGTGACGAGCCACAAGACTATCGACGCACGCGGTGCCAACGTACATATTGCCTATGGTGCTGGCATTAGCATTCAATATGTCCGAAATGTAATCATCCACGGCCTTCACATCCACCACGTCATCCAAGCTAGTGGTGGCATGATCCGAGACTCCTTCAACCATGTCGGCCTTCGAACCGTCAGCGACGGAGACGGCGTCTCCATCTTCGGATCATCCAACGTATGGCTGGATCACCTTTCCATGTCCAACTGCCAGGACGGATTGATCGACGCAATTCAAGGCTCCACCGCAATCACAATCTCAAACTCTCATTTCACTCATCACAACGACGTGATGTTGTTCGGCGCAAGCGATTCGTACCAAGGGGACTCGATCATGCAAGTGACAGTCGCGTTCAACCATTTCGGAAAGGGATTGATTCAGAGAATGCCAAGGTGCAGATGGGGATTCTTCCATGTAGTTAACAATGACTACACGCACTGGCTGATGTACGCGATCGGCGGGAGCATGCATCCGACGATCATCAGTCAGGGGAACCGATTCATTGCGCCACCAAACCCGGCAGCAAAACAGATTACGAACAGAAACTATGCAACAGAGAGTGTGTGGAAAACATGGACATGGAGATCAGAGGGGGATTTGATGATGAATGGAGCATATTTTGTGCAATCTGGAAATCCAAGCAAAAGAAGGCCATACAGCAGGTTTGATATGATCAGGGCTAAGCCAGGCACTTTTGTTAGAAGGCTCACACGCTTCTCTGGATCACTCAATTGTTACATTGGTCGCCCTTGCTAA

Coding sequence (CDS)

ATGATGGCTGGTTGTAGAATTAAGGTTTTGATGGTACTGGTTTCAATGGCTGTTTTGATACCAACTTTCAGAGCTGGCATTGCTGAATTTGATGATTATTTAGTTGAAAAGGAAGCTGAAGCCAAACAAGATGCTCTTGAGGCTTTCGATTCTGAACCCATGAATGTCACTGAGCATCTCAACCACCAAGTTCATTTACTTTTTGAGGGAAAAAATAACACTAGGAGAAGCTTGAGGAAATATAATGGGCCATGCTTGGCTACAAACCCGATCGACCGTTGCTGGCGATGCGACCCAAACTGGGCCAACAACCGTAAGAAGCTTGCCTCTTGCGTGCTTGGTTTTGGCCGAAAAACCACTGGTGGCTTGAAAGGGCGTTTCTACACCGTGACCGACCCATCCGACGACAATTTTGTAGACCCTAAACCGGGAACCCTCCGACACGCTTGCATTCAAAAGAGGCCGTTGTGGATCATATTTGGGCGAAGCATGATCATCAAGCTGCAAAAGGAGCTCTTGGTGACGAGCCACAAGACTATCGACGCACGCGGTGCCAACGTACATATTGCCTATGGTGCTGGCATTAGCATTCAATATGTCCGAAATGTAATCATCCACGGCCTTCACATCCACCACGTCATCCAAGCTAGTGGTGGCATGATCCGAGACTCCTTCAACCATGTCGGCCTTCGAACCGTCAGCGACGGAGACGGCGTCTCCATCTTCGGATCATCCAACGTATGGCTGGATCACCTTTCCATGTCCAACTGCCAGGACGGATTGATCGACGCAATTCAAGGCTCCACCGCAATCACAATCTCAAACTCTCATTTCACTCATCACAACGACGTGATGTTGTTCGGCGCAAGCGATTCGTACCAAGGGGACTCGATCATGCAAGTGACAGTCGCGTTCAACCATTTCGGAAAGGGATTGATTCAGAGAATGCCAAGGTGCAGATGGGGATTCTTCCATGTAGTTAACAATGACTACACGCACTGGCTGATGTACGCGATCGGCGGGAGCATGCATCCGACGATCATCAGTCAGGGGAACCGATTCATTGCGCCACCAAACCCGGCAGCAAAACAGATTACGAACAGAAACTATGCAACAGAGAGTGTGTGGAAAACATGGACATGGAGATCAGAGGGGGATTTGATGATGAATGGAGCATATTTTGTGCAATCTGGAAATCCAAGCAAAAGAAGGCCATACAGCAGGTTTGATATGATCAGGGCTAAGCCAGGCACTTTTGTTAGAAGGCTCACACGCTTCTCTGGATCACTCAATTGTTACATTGGTCGCCCTTGCTAA

Protein sequence

MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQVHLLFEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC

Homology

[Close]

BLAST of Sed0004596 vs. NCBI nr
Match: XP_004147462.2 (probable pectate lyase 7 [Cucumis sativus] >KGN59593.1 hypothetical protein Csa_001450 [Cucumis sativus])

HSP 1 Score: 806.2 bits (2081), Expect = 1.4e-229
Identity = 376/441 (85.26%), Postives = 407/441 (92.29%), Query Frame = 0


Query: 1   MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 60
           MM GC+IKV+MVLVSMAVL+PT RAGIAEFDD+L++K  EAKQ +LEAF  +PMNVT+H 
Sbjct: 1   MMTGCKIKVVMVLVSMAVLMPTLRAGIAEFDDFLLQKSEEAKQASLEAFHPDPMNVTDHF 60

Query: 61  NHQVHLL---FEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 120
           N  VHL     EG N+TRRSL KYNGPCLATNPIDRCWRCDPNWA NRKKLA CVLGFGR
Sbjct: 61  NQHVHLALEGIEGSNSTRRSLSKYNGPCLATNPIDRCWRCDPNWAKNRKKLAKCVLGFGR 120

Query: 121 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 180
           KTTGG KGR Y VTDPSD++ ++P+PGTLR+  +QK+PLWIIF RSMII+L KEL++TSH
Sbjct: 121 KTTGGKKGRIYVVTDPSDNDVINPRPGTLRYGALQKKPLWIIFARSMIIRLSKELMITSH 180

Query: 181 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 240
           KTIDARGANVHIAYGAG+SIQ+ RNVIIHGL IHHVI   GGMIRD+ NHVGLRTVSDGD
Sbjct: 181 KTIDARGANVHIAYGAGLSIQFARNVIIHGLRIHHVISTGGGMIRDTANHVGLRTVSDGD 240

Query: 241 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300
           G+SIFGS+N+WLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS
Sbjct: 241 GISIFGSTNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300

Query: 301 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 360
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 361 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 420
           PNPAA+QITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMI+AKPG
Sbjct: 361 PNPAARQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIKAKPG 420

Query: 421 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNCY+GRPC
Sbjct: 421 TFVRRLTRFSGSLNCYVGRPC 441

[Close]

BLAST of Sed0004596 vs. NCBI nr
Match: XP_038905811.1 (pectate lyase-like [Benincasa hispida])

HSP 1 Score: 805.1 bits (2078), Expect = 3.1e-229
Identity = 378/441 (85.71%), Postives = 410/441 (92.97%), Query Frame = 0


Query: 2   MAG-CRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 61
           MAG C IKV+M LVSMAVL+PT RAGIAE+DDYL++K  EAKQ ALE+F  +PMNVT+H 
Sbjct: 1   MAGCCSIKVVMFLVSMAVLMPTLRAGIAEYDDYLLQKAEEAKQAALESFHPDPMNVTDHF 60

Query: 62  NHQVHLL---FEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 121
           N  VHL     EG N+TRRSL+KYNGPC+ATNPIDRCWRCD NWA NRKKL SCVLGFGR
Sbjct: 61  NEHVHLALEGIEGSNSTRRSLKKYNGPCMATNPIDRCWRCDRNWAMNRKKLVSCVLGFGR 120

Query: 122 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 181
           KTTGGL+GRFY VTDPSD++ ++P+ GTLRHA IQKRPLWIIFGRSMII+L KELL+TSH
Sbjct: 121 KTTGGLRGRFYVVTDPSDNDVINPRRGTLRHAAIQKRPLWIIFGRSMIIRLSKELLITSH 180

Query: 182 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 241
           KTIDARGANVHIAYGAG+SIQ+ RNVIIHGLHIHHV+ A GGMIRDS +HVGLRTVSDGD
Sbjct: 181 KTIDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHVVSARGGMIRDSADHVGLRTVSDGD 240

Query: 242 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 301
           G+SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS
Sbjct: 241 GISIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300

Query: 302 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 361
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 362 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 421
           PNPAA+Q+TNRNYATESVW+TWTWRSEGDLMMNGAYF+QSGNPSKRRPYSRFDMI+AKPG
Sbjct: 361 PNPAARQVTNRNYATESVWRTWTWRSEGDLMMNGAYFIQSGNPSKRRPYSRFDMIKAKPG 420

Query: 422 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNCY+GRPC
Sbjct: 421 TFVRRLTRFSGSLNCYVGRPC 441

[Close]

BLAST of Sed0004596 vs. NCBI nr
Match: XP_008443432.1 (PREDICTED: probable pectate lyase 19 [Cucumis melo])

HSP 1 Score: 803.9 bits (2075), Expect = 6.9e-229
Identity = 377/441 (85.49%), Postives = 406/441 (92.06%), Query Frame = 0


Query: 1   MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 60
           M+AGC+IK+LMVLVSMAVL+PT RAGIAEFDDYL++K  EAKQ +LEAF  +PMNVT+H 
Sbjct: 1   MVAGCKIKLLMVLVSMAVLMPTLRAGIAEFDDYLLQKAEEAKQASLEAFHPDPMNVTDHF 60

Query: 61  NHQVHLL---FEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 120
           N  VHL     EG N+TRRSL KY GPCLATNPIDRCWRCDPNWA NRKKLA CVLGFGR
Sbjct: 61  NQHVHLALEGIEGSNSTRRSLAKYKGPCLATNPIDRCWRCDPNWAKNRKKLAKCVLGFGR 120

Query: 121 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 180
           KTTGG KGR Y VTDPSD++ V+PKPGTLR+  +QKRPLWIIF RSMII+L KEL+VTSH
Sbjct: 121 KTTGGKKGRIYVVTDPSDNDVVNPKPGTLRYGALQKRPLWIIFARSMIIRLSKELMVTSH 180

Query: 181 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 240
           KTIDARG+NVHIAYGAG+SIQ+ RNVIIHGL IHHVI   GGMIRD+ NHVGLRTVSDGD
Sbjct: 181 KTIDARGSNVHIAYGAGLSIQFARNVIIHGLRIHHVISTGGGMIRDTANHVGLRTVSDGD 240

Query: 241 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300
           G+SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS
Sbjct: 241 GISIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300

Query: 301 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 360
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 361 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 420
           PNPAA+QITNRNYA ESVWKTWTWRSEGDLMMNGAYF+QSGNPSKRRPYSRFDMI+AKPG
Sbjct: 361 PNPAARQITNRNYAPESVWKTWTWRSEGDLMMNGAYFIQSGNPSKRRPYSRFDMIKAKPG 420

Query: 421 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNC++GRPC
Sbjct: 421 TFVRRLTRFSGSLNCFVGRPC 441

[Close]

BLAST of Sed0004596 vs. NCBI nr
Match: XP_022928644.1 (pectate lyase-like [Cucurbita moschata])

HSP 1 Score: 800.0 bits (2065), Expect = 9.9e-228
Identity = 374/439 (85.19%), Postives = 407/439 (92.71%), Query Frame = 0


Query: 1   MMAGCRIKVLMV-LVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEH 60
           MMAGC  KVLMV L+SMAVL+PT RAGIAE+DD+L++K   A+Q A EA++ +PMNVT H
Sbjct: 1   MMAGCWFKVLMVLLLSMAVLMPTIRAGIAEYDDFLLKKAVAAEQVAQEAYNPDPMNVTNH 60

Query: 61  LNHQVHLLFEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKT 120
           LN QVHL FEG N+TRR L KY GPCLATNPIDRCWRC+  WA NRKKLASCVLGFGRKT
Sbjct: 61  LNLQVHLAFEGSNSTRRGLAKYKGPCLATNPIDRCWRCNKKWAKNRKKLASCVLGFGRKT 120

Query: 121 TGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKT 180
           TGG +GR+Y VTDPSD  FVDPKPGTLRHACIQKRPLWI FGRSMIIKL KELL++SHKT
Sbjct: 121 TGGKRGRYYKVTDPSDTEFVDPKPGTLRHACIQKRPLWITFGRSMIIKLSKELLISSHKT 180

Query: 181 IDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGV 240
           IDARGANVHIAYGAG+SIQ+ RNVIIHGLHIHH++ A+GGMIRD++NHVGLRTVSDGDG+
Sbjct: 181 IDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHIVAANGGMIRDAYNHVGLRTVSDGDGI 240

Query: 241 SIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIM 300
           SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAIT+SNSHFTHHNDVMLFGASDSYQGDSIM
Sbjct: 241 SIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSYQGDSIM 300

Query: 301 QVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPN 360
           QVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAPPN
Sbjct: 301 QVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPN 360

Query: 361 PAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTF 420
           PAA+QITNRNYA ESVWKTWTWRSEGDL+MNGAYFVQSG+PSKRRPYSR DMI+AKPGT+
Sbjct: 361 PAARQITNRNYAPESVWKTWTWRSEGDLLMNGAYFVQSGSPSKRRPYSRLDMIKAKPGTY 420

Query: 421 VRRLTRFSGSLNCYIGRPC 439
           VRRLTRF+GSLNCY GRPC
Sbjct: 421 VRRLTRFAGSLNCYEGRPC 439

[Close]

BLAST of Sed0004596 vs. NCBI nr
Match: XP_023531678.1 (pectate lyase-like [Cucurbita pepo subsp. pepo] >XP_023531679.1 pectate lyase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 799.7 bits (2064), Expect = 1.3e-227
Identity = 374/439 (85.19%), Postives = 407/439 (92.71%), Query Frame = 0


Query: 1   MMAGCRIKVLMV-LVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEH 60
           MMAGCR KVLMV L+SMAVL+PT RAGIAE+DD+L++K   A+Q A EA++ +PMNVT H
Sbjct: 1   MMAGCRFKVLMVLLLSMAVLMPTLRAGIAEYDDFLLKKAVAAEQVAHEAYNPDPMNVTNH 60

Query: 61  LNHQVHLLFEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKT 120
           LN QVHL FEG N+TRR L KY GPCLATNPIDRCWRC+  WA NRKKLASCVLGFGRKT
Sbjct: 61  LNLQVHLAFEGSNSTRRGLAKYKGPCLATNPIDRCWRCNKKWAKNRKKLASCVLGFGRKT 120

Query: 121 TGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKT 180
           TGG +GR+Y VTDPSD  FVDPKPGTLRHACIQKRPLWI FGRSMIIKL KELL++SHKT
Sbjct: 121 TGGKRGRYYKVTDPSDTEFVDPKPGTLRHACIQKRPLWITFGRSMIIKLSKELLISSHKT 180

Query: 181 IDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGV 240
           IDARGANVHIAYGAG+SIQ+ RNVIIHGLHIHH++ A+GGMIRD++NHVGLRTVSDGDG+
Sbjct: 181 IDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHIVAANGGMIRDAYNHVGLRTVSDGDGI 240

Query: 241 SIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIM 300
           SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAIT+SNSHFTHHNDVMLFGASDSYQGDSIM
Sbjct: 241 SIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSYQGDSIM 300

Query: 301 QVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPN 360
           QVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAPPN
Sbjct: 301 QVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPN 360

Query: 361 PAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTF 420
           PAA+QITNRNYA ESVWKTWTWRSEGDL+MNGAYFVQSG+ SKRRPYSR DMI+AKPGT+
Sbjct: 361 PAARQITNRNYAPESVWKTWTWRSEGDLLMNGAYFVQSGSSSKRRPYSRLDMIKAKPGTY 420

Query: 421 VRRLTRFSGSLNCYIGRPC 439
           VRRLTRF+GSLNCY GRPC
Sbjct: 421 VRRLTRFAGSLNCYEGRPC 439

[Close]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot
Match: Q9LFP5 (Probable pectate lyase 19 OS=Arabidopsis thaliana OX=3702 GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 4.6e-159
Identity = 267/468 (57.05%), Postives = 338/468 (72.22%), Query Frame = 0


Query: 6   RIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQ-- 65
           R+  LM    +AVLIPT R  I+E D+Y  ++  EA++  L+A+ S+P  + +H + +  
Sbjct: 5   RLSKLMFTFCIAVLIPTIRGNISELDEYWSQRADEAREFTLQAYHSDPYEIVDHFHERHY 64

Query: 66  ------------------------VHLLFEGKNNTRRSLR--------KYNGPCLATNPI 125
                                   + +L    N+TRRSLR        K  GPC A+NPI
Sbjct: 65  DNSTDVTTPEEDGDAKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPI 124

Query: 126 DRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACI 185
           D+CWRC  +WA  RKKL  CV GFG +TTGG +GR Y VT   D++ V+PKPGTLRHA I
Sbjct: 125 DKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVI 184

Query: 186 QKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNVIIHGLHIH 245
           QK PLWIIF   M I+L +ELL+ SHKTIDARGANVH+A+GAGI++Q+V+NVIIHGLHIH
Sbjct: 185 QKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIH 244

Query: 246 HVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAI 305
           H+ ++SGGMIRDS +H G+RT +DGDG+SI+GSSN+WLDH+SMS CQDGLIDAI GST I
Sbjct: 245 HISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGI 304

Query: 306 TISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDY 365
           TISNSHFTHHNDVML GA ++ + D  MQVTVA+NHFGKGL+QRMPR RWGF HVVNNDY
Sbjct: 305 TISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNNDY 364

Query: 366 THWLMYAIGGSMHPTIISQGNRFIAPPN-PAAKQITNRNYATESVWKTWTWRSEGDLMMN 425
           THW +YAIGGS  PTI+S GNRFIAPP+ P  +++T R+YA+E  WK W WRS+ D+ MN
Sbjct: 365 THWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASEDEWKHWNWRSDKDVFMN 424

Query: 426 GAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           GAYF QSGNP  +  ++R  MI+ K G  V +LT+++G+L+C +GR C
Sbjct: 425 GAYFRQSGNPQYKCAHTRQQMIKPKNGLAVSKLTKYAGALDCRVGRRC 472

[Close]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot
Match: P40973 (Pectate lyase OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 7.8e-159
Identity = 264/415 (63.61%), Postives = 320/415 (77.11%), Query Frame = 0


Query: 25  AGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQVHLLFEGKNNTRRSLRKYN-G 84
           A IAEFD+Y  +K   A+  A +A+   P  VT H N  VH  FEG N+TRR+LR    G
Sbjct: 22  ANIAEFDEYWQKKSKVAQAKAKKAYTPHPEEVTNHFNKAVHSSFEG-NSTRRNLRTNKLG 81

Query: 85  PCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKP 144
            CLATNPIDRCWRC  NW+ NRK L  CV GFGRKTTGG  G  Y VTDPSDD+  DPK 
Sbjct: 82  QCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKF 141

Query: 145 GTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNV 204
           GTLR   IQ RPLWIIFG+SM+I+L++EL++ + KTID RGANV IA GA +++Q+V NV
Sbjct: 142 GTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNV 201

Query: 205 IIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLID 264
           IIHG+HIH +    GG+IRDS  H G+RT SDGDG+SI GSSN+W+DH+S++ C DGLID
Sbjct: 202 IIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLID 261

Query: 265 AIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGF 324
            I GSTAITISN H T H+DVML GASD+Y  D IMQVTVAFNHFG+GL+QRMPRCR+GF
Sbjct: 262 VILGSTAITISNCHLTEHDDVMLLGASDTYTQDEIMQVTVAFNHFGRGLVQRMPRCRYGF 321

Query: 325 FHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPAAKQITNRNYATESVWKTWTWRS 384
            HVVNNDYTHW+MYA+GGS HPTIISQGNR+IAP   AAK++T R+YA  + W  WTW+S
Sbjct: 322 VHVVNNDYTHWIMYAVGGSQHPTIISQGNRYIAPHIEAAKEVTKRDYAEPAEWSKWTWKS 381

Query: 385 EGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           +GDL ++GA+FV+SG P + + YS+ D+I+AKPGTFV+RLTRFSG+LNC     C
Sbjct: 382 QGDLFVSGAFFVESGGPFENK-YSKKDLIKAKPGTFVQRLTRFSGALNCKENMEC 434

[Close]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot
Match: Q9SRH4 (Probable pectate lyase 7 OS=Arabidopsis thaliana OX=3702 GN=At3g01270 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.9e-157
Identity = 266/475 (56.00%), Postives = 337/475 (70.95%), Query Frame = 0


Query: 2   MAGCRIKVLMVLVSMAVLIPTFRAGIA-EFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 61
           M   R+  L+ ++ +A LIPT RA +A E D+Y V K  EA++  L A+  +P  + +H 
Sbjct: 1   METARLFKLVCVICIASLIPTIRANVADETDEYWVNKANEARKHTLMAYHPDPYEIVDHF 60

Query: 62  NHQ------------------------VHLLFEGKNNTRRSL------------RKYNGP 121
           + +                        + ++    N+TRRSL             K  GP
Sbjct: 61  HERHYDNSTDVEGTEEEKAVASEEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGP 120

Query: 122 CLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPG 181
           C A+NPID+CWRC P+WA  RKKL  CV GFG +TTGG +GR Y VT P DD+ V+P+PG
Sbjct: 121 CTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPG 180

Query: 182 TLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNVI 241
           TLRHA IQK PLWI+F   M I+L +EL++TS KTIDARGANVHIAYGAGI++QYV N+I
Sbjct: 181 TLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNII 240

Query: 242 IHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDA 301
           IHGLH+HH++++SGG+IRDS NH G R  +DGDG+SIFG++N+WLDH+SMS CQDGLIDA
Sbjct: 241 IHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDA 300

Query: 302 IQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFF 361
           I GSTAITISNSHFTHHNDVML GA ++   D  MQVTVA+NHFGKGL+QRMPR RWGF 
Sbjct: 301 IMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFV 360

Query: 362 HVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPA-AKQITNRNYATESVWKTWTWRS 421
           HVVNNDYTHW +YAIGGS  PTI+S GNRFIAPP+    +++T R+YA+ES WK W WRS
Sbjct: 361 HVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRS 420

Query: 422 EGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           E D+ MN AYF QSGNP  +  +SR  MI+ K G  V +LT+++G+L+C +G+ C
Sbjct: 421 EKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC 475

[Close]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot
Match: P15722 (Probable pectate lyase P59 OS=Solanum lycopersicum OX=4081 GN=LAT59 PE=2 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 5.6e-157
Identity = 265/450 (58.89%), Postives = 327/450 (72.67%), Query Frame = 0


Query: 2   MAGCRIK--VLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEH 61
           M G +IK   L + ++ A +IP+  A I  +D+    +  EAK+ A   ++  P NVT  
Sbjct: 1   MGGPKIKYSFLFLCITFATIIPSLMAHIGHYDEVWRRRAEEAKEYARNIYEPHPENVTLA 60

Query: 62  LNHQVHLLFE--------GKNNTRRSL--RKYNGPCLATNPIDRCWRCDPNWANNRKKLA 121
            N ++    +          N+TRR L  +KY GPC+ TNPID+CWRCDPNWA+NRKKLA
Sbjct: 61  FNQKLRDTMKELKKVKGTHNNSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLA 120

Query: 122 SCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQ 181
            C +GFG K  GG  G FY VTD SDD + DPKPGTLRHA IQK PLWIIF R M I+L 
Sbjct: 121 DCAMGFGSKAIGGKDGEFYVVTDNSDD-YNDPKPGTLRHAVIQKEPLWIIFKRGMNIRLH 180

Query: 182 KELLVTSHKTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVG 241
           +E+++ S KTIDARG NVHI  GAGI++QY++NVIIHGLHIH +++ +GGM+RD+ +H+G
Sbjct: 181 QEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIG 240

Query: 242 LRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGA 301
           +RT SDGDG+SIFG+S +W+DH+SM  C DGLIDA++GST ITISN HFT HN+VMLFGA
Sbjct: 241 IRTKSDGDGISIFGASYIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGA 300

Query: 302 SDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIIS 361
           SDS   D +MQ+T+AFNHFGK LIQRMPRCRWG+ HVVNNDYTHW MYAIGGSMHPTII 
Sbjct: 301 SDSSSIDQVMQITLAFNHFGKRLIQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIIH 360

Query: 362 QGNRFIAPPNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPS-KRRPYSR 421
           QGNRFIAPP+   KQ+T R Y  ESVW  WTWRSEG+L MNGAYF +SG+P    +    
Sbjct: 361 QGNRFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPEWSSKHKDL 420

Query: 422 FDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           +D I A P   V  +TRF+G L C  G+PC
Sbjct: 421 YDGISAAPAEDVTWMTRFAGVLGCKPGKPC 449

[Close]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot
Match: Q9M9S2 (Probable pectate lyase 3 OS=Arabidopsis thaliana OX=3702 GN=AT59 PE=2 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.3e-153
Identity = 255/440 (57.95%), Postives = 321/440 (72.95%), Query Frame = 0


Query: 16  MAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQVHLLF---EGKN 75
           +A++ P  R  +A FD Y  +++++A +  + ++D  P+NVT H N+ V++     E +N
Sbjct: 20  LAIVAPQVRGNVAVFDSYWTQRQSDALKQTIGSYDPHPLNVTNHFNYHVNIAVDASESRN 79

Query: 76  NTRRSL---------RKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGL 135
           +TRR L          K +G CLA NPID CWRCD NWANNRKKLA CVLGFGR+TTGG 
Sbjct: 80  DTRRELTQVRSGRKTHKSSGKCLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGK 139

Query: 136 KGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDAR 195
            G  Y V D SD++ ++PKPGTLRHA  +  PLWIIF RSMIIKLQ+EL++TS KTID R
Sbjct: 140 DGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGR 199

Query: 196 GANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFG 255
           GA V+I  GAG+++Q+V NVIIH +++ H++  +GG+IRDS  H+GLRT SDGDG+S+FG
Sbjct: 200 GARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFG 259

Query: 256 SSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTV 315
           ++N+W+DH+SM+ C DG+IDAI GSTA+TISNSHFT H +VMLFGA D +  D  MQ+TV
Sbjct: 260 ATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGARDEHVIDKKMQITV 319

Query: 316 AFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPAAK 375
           AFNHFGK L QRMPRCR+G  HVVNNDYTHW MYAIGG+M+PTIISQGNRFIAPPN  AK
Sbjct: 320 AFNHFGKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAK 379

Query: 376 QITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSG-----NPSKRRPYSRFDMIRAKPGT 435
           QIT R Y     WK+W W+SEGD  +NGAYFVQSG     +   + P      IR KPGT
Sbjct: 380 QITKREYTPYGEWKSWNWQSEGDYFLNGAYFVQSGKANAWSSKPKTPLPNKFTIRPKPGT 439

Query: 436 FVRRLTRFSGSLNCYIGRPC 439
            VR+LT  +G L C +G  C
Sbjct: 440 MVRKLTMDAGVLGCKLGEAC 459

[Close]

BLAST of Sed0004596 vs. ExPASy TrEMBL
Match: A0A0A0LCU3 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_3G827350 PE=3 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 6.7e-230
Identity = 376/441 (85.26%), Postives = 407/441 (92.29%), Query Frame = 0


Query: 1   MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 60
           MM GC+IKV+MVLVSMAVL+PT RAGIAEFDD+L++K  EAKQ +LEAF  +PMNVT+H 
Sbjct: 1   MMTGCKIKVVMVLVSMAVLMPTLRAGIAEFDDFLLQKSEEAKQASLEAFHPDPMNVTDHF 60

Query: 61  NHQVHLL---FEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 120
           N  VHL     EG N+TRRSL KYNGPCLATNPIDRCWRCDPNWA NRKKLA CVLGFGR
Sbjct: 61  NQHVHLALEGIEGSNSTRRSLSKYNGPCLATNPIDRCWRCDPNWAKNRKKLAKCVLGFGR 120

Query: 121 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 180
           KTTGG KGR Y VTDPSD++ ++P+PGTLR+  +QK+PLWIIF RSMII+L KEL++TSH
Sbjct: 121 KTTGGKKGRIYVVTDPSDNDVINPRPGTLRYGALQKKPLWIIFARSMIIRLSKELMITSH 180

Query: 181 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 240
           KTIDARGANVHIAYGAG+SIQ+ RNVIIHGL IHHVI   GGMIRD+ NHVGLRTVSDGD
Sbjct: 181 KTIDARGANVHIAYGAGLSIQFARNVIIHGLRIHHVISTGGGMIRDTANHVGLRTVSDGD 240

Query: 241 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300
           G+SIFGS+N+WLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS
Sbjct: 241 GISIFGSTNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300

Query: 301 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 360
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 361 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 420
           PNPAA+QITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMI+AKPG
Sbjct: 361 PNPAARQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIKAKPG 420

Query: 421 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNCY+GRPC
Sbjct: 421 TFVRRLTRFSGSLNCYVGRPC 441

[Close]

BLAST of Sed0004596 vs. ExPASy TrEMBL
Match: A0A1S3B8R7 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103487022 PE=3 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 3.3e-229
Identity = 377/441 (85.49%), Postives = 406/441 (92.06%), Query Frame = 0


Query: 1   MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 60
           M+AGC+IK+LMVLVSMAVL+PT RAGIAEFDDYL++K  EAKQ +LEAF  +PMNVT+H 
Sbjct: 1   MVAGCKIKLLMVLVSMAVLMPTLRAGIAEFDDYLLQKAEEAKQASLEAFHPDPMNVTDHF 60

Query: 61  NHQVHLL---FEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 120
           N  VHL     EG N+TRRSL KY GPCLATNPIDRCWRCDPNWA NRKKLA CVLGFGR
Sbjct: 61  NQHVHLALEGIEGSNSTRRSLAKYKGPCLATNPIDRCWRCDPNWAKNRKKLAKCVLGFGR 120

Query: 121 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 180
           KTTGG KGR Y VTDPSD++ V+PKPGTLR+  +QKRPLWIIF RSMII+L KEL+VTSH
Sbjct: 121 KTTGGKKGRIYVVTDPSDNDVVNPKPGTLRYGALQKRPLWIIFARSMIIRLSKELMVTSH 180

Query: 181 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 240
           KTIDARG+NVHIAYGAG+SIQ+ RNVIIHGL IHHVI   GGMIRD+ NHVGLRTVSDGD
Sbjct: 181 KTIDARGSNVHIAYGAGLSIQFARNVIIHGLRIHHVISTGGGMIRDTANHVGLRTVSDGD 240

Query: 241 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300
           G+SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS
Sbjct: 241 GISIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300

Query: 301 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 360
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 361 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 420
           PNPAA+QITNRNYA ESVWKTWTWRSEGDLMMNGAYF+QSGNPSKRRPYSRFDMI+AKPG
Sbjct: 361 PNPAARQITNRNYAPESVWKTWTWRSEGDLMMNGAYFIQSGNPSKRRPYSRFDMIKAKPG 420

Query: 421 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNC++GRPC
Sbjct: 421 TFVRRLTRFSGSLNCFVGRPC 441

[Close]

BLAST of Sed0004596 vs. ExPASy TrEMBL
Match: A0A6J1ELF8 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111435488 PE=3 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 4.8e-228
Identity = 374/439 (85.19%), Postives = 407/439 (92.71%), Query Frame = 0


Query: 1   MMAGCRIKVLMV-LVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEH 60
           MMAGC  KVLMV L+SMAVL+PT RAGIAE+DD+L++K   A+Q A EA++ +PMNVT H
Sbjct: 1   MMAGCWFKVLMVLLLSMAVLMPTIRAGIAEYDDFLLKKAVAAEQVAQEAYNPDPMNVTNH 60

Query: 61  LNHQVHLLFEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKT 120
           LN QVHL FEG N+TRR L KY GPCLATNPIDRCWRC+  WA NRKKLASCVLGFGRKT
Sbjct: 61  LNLQVHLAFEGSNSTRRGLAKYKGPCLATNPIDRCWRCNKKWAKNRKKLASCVLGFGRKT 120

Query: 121 TGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKT 180
           TGG +GR+Y VTDPSD  FVDPKPGTLRHACIQKRPLWI FGRSMIIKL KELL++SHKT
Sbjct: 121 TGGKRGRYYKVTDPSDTEFVDPKPGTLRHACIQKRPLWITFGRSMIIKLSKELLISSHKT 180

Query: 181 IDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGV 240
           IDARGANVHIAYGAG+SIQ+ RNVIIHGLHIHH++ A+GGMIRD++NHVGLRTVSDGDG+
Sbjct: 181 IDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHIVAANGGMIRDAYNHVGLRTVSDGDGI 240

Query: 241 SIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIM 300
           SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAIT+SNSHFTHHNDVMLFGASDSYQGDSIM
Sbjct: 241 SIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSYQGDSIM 300

Query: 301 QVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPN 360
           QVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAPPN
Sbjct: 301 QVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPN 360

Query: 361 PAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTF 420
           PAA+QITNRNYA ESVWKTWTWRSEGDL+MNGAYFVQSG+PSKRRPYSR DMI+AKPGT+
Sbjct: 361 PAARQITNRNYAPESVWKTWTWRSEGDLLMNGAYFVQSGSPSKRRPYSRLDMIKAKPGTY 420

Query: 421 VRRLTRFSGSLNCYIGRPC 439
           VRRLTRF+GSLNCY GRPC
Sbjct: 421 VRRLTRFAGSLNCYEGRPC 439

[Close]

BLAST of Sed0004596 vs. ExPASy TrEMBL
Match: A0A6J1I070 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111469675 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.4e-227
Identity = 373/439 (84.97%), Postives = 407/439 (92.71%), Query Frame = 0


Query: 1   MMAGCRIKVLMV-LVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEH 60
           MMAGCR KVLMV L+SMAVL+PT RAGIAE+DD+L+ K   A+Q A EA++ +PMNVT H
Sbjct: 1   MMAGCRFKVLMVLLLSMAVLMPTLRAGIAEYDDFLLNKAVVAQQVAQEAYNPDPMNVTNH 60

Query: 61  LNHQVHLLFEGKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKT 120
           LN QVHL FEG N+TRR L KY GPCLATNPIDRCWRC+  WA NRKKLASCVLGFGRKT
Sbjct: 61  LNLQVHLAFEGSNSTRRGLAKYKGPCLATNPIDRCWRCNRKWAKNRKKLASCVLGFGRKT 120

Query: 121 TGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKT 180
           TGG +GR+Y VTDPSD  FVDPKPGTLRHACIQKRPLWIIFGRSMIIKL KELL++SHKT
Sbjct: 121 TGGKRGRYYKVTDPSDTEFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLSKELLISSHKT 180

Query: 181 IDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGV 240
           IDARGANVHIAYGAG+SIQ+ RNVIIHGLHIHH+++A+GGMIRD++NHVGLRTVSDGDG+
Sbjct: 181 IDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHIVEANGGMIRDAYNHVGLRTVSDGDGI 240

Query: 241 SIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIM 300
           SIFGSSN+WLDHLSMSNCQDGLIDAIQGSTAIT+SNSHFTHHNDVMLFGASDSYQGDSIM
Sbjct: 241 SIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSYQGDSIM 300

Query: 301 QVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPN 360
           QVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAPPN
Sbjct: 301 QVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPN 360

Query: 361 PAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTF 420
           PAA+QITNRNYA ESVWKTWTWRSEGDL+MNGAYF+QSG+ SKRRPYSR DMI+AKPGT+
Sbjct: 361 PAARQITNRNYAPESVWKTWTWRSEGDLLMNGAYFIQSGSSSKRRPYSRLDMIKAKPGTY 420

Query: 421 VRRLTRFSGSLNCYIGRPC 439
           VRRLTRF+GSLNCY GR C
Sbjct: 421 VRRLTRFAGSLNCYEGRAC 439

[Close]

BLAST of Sed0004596 vs. ExPASy TrEMBL
Match: A0A6J1J8N7 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111482295 PE=3 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 5.3e-227
Identity = 374/441 (84.81%), Postives = 408/441 (92.52%), Query Frame = 0


Query: 1   MMAGCRIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 60
           MMAG  IK  +VL+SMA+L+P+ RAGIAE+DD+L+++  EAKQ AL+A+   PMNVTEH 
Sbjct: 1   MMAGWSIKAALVLLSMALLMPSLRAGIAEYDDFLLQQAEEAKQAALKAYHPHPMNVTEHF 60

Query: 61  NHQVHLLFE---GKNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 120
           NH V+L  E   G NNTRRSLRKY GPCLATNPIDRCWRCD NWANNRKKL  CVLGFGR
Sbjct: 61  NHHVYLALEGIQGNNNTRRSLRKYKGPCLATNPIDRCWRCDQNWANNRKKLGYCVLGFGR 120

Query: 121 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 180
           KTTGGL+GRFYTVTD SD + V+PKPGTLRHA +QKRPLWIIFGRSMII+L KELLVTS 
Sbjct: 121 KTTGGLRGRFYTVTDASDADVVNPKPGTLRHAVVQKRPLWIIFGRSMIIRLSKELLVTSD 180

Query: 181 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 240
           KTIDARGANVHIAYGAGISIQ+ RNVIIHGLHIHH++ ASGGMIRD+ +HVGLRTVSDGD
Sbjct: 181 KTIDARGANVHIAYGAGISIQFTRNVIIHGLHIHHILSASGGMIRDADDHVGLRTVSDGD 240

Query: 241 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 300
           G+SIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAIT+SNSHFTHHNDVMLFGASDS+QGDS
Sbjct: 241 GISIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSFQGDS 300

Query: 301 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 360
           IMQVTVAFNHFGKGL+QRMPRCRWGFFHVVNNDYTHWLMYAIGGS HPTIISQGNRFIAP
Sbjct: 301 IMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAP 360

Query: 361 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPG 420
           PNPAAKQITNRNYATES+WKTWTWRSEGDL+MNGAYFV+SG+PSKRRPYSRFDMI+A+PG
Sbjct: 361 PNPAAKQITNRNYATESIWKTWTWRSEGDLLMNGAYFVESGDPSKRRPYSRFDMIKARPG 420

Query: 421 TFVRRLTRFSGSLNCYIGRPC 439
           TFVRRLTRFSGSLNCY+GRPC
Sbjct: 421 TFVRRLTRFSGSLNCYVGRPC 441

[Close]

BLAST of Sed0004596 vs. TAIR 10
Match: AT5G15110.1 (Pectate lyase family protein )

HSP 1 Score: 562.0 bits (1447), Expect = 4.2e-160
Identity = 266/468 (56.84%), Postives = 338/468 (72.22%), Query Frame = 0


Query: 6   RIKVLMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQ-- 65
           R+  LM    +AVLIPT R  I+E D+Y  ++  EA++  L+A+ S+P  + +H + +  
Sbjct: 5   RLSKLMFTFCIAVLIPTIRGNISELDEYWSQRADEAREFTLQAYHSDPYEIVDHFHERHY 64

Query: 66  ------------------------VHLLFEGKNNTRRSLR--------KYNGPCLATNPI 125
                                   + +L    N+TRRSLR        K  GPC A+NPI
Sbjct: 65  DNSTDVTTPEEDGDAKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPI 124

Query: 126 DRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACI 185
           D+CWRC  +WA  RKKL  CV GFG +TTGG +GR Y VT   D++ V+PKPGTLRHA I
Sbjct: 125 DKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVI 184

Query: 186 QKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNVIIHGLHIH 245
           QK PLWIIF   M I+L +ELL+ SHKTIDARGANVH+A+GAGI++Q+V+NV+IHGLHIH
Sbjct: 185 QKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVVIHGLHIH 244

Query: 246 HVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAI 305
           H+ ++SGGMIRDS +H G+RT +DGDG+SI+GSSN+WLDH+SMS CQDGLIDAI GST I
Sbjct: 245 HISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGI 304

Query: 306 TISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDY 365
           TISNSHFTHHNDVML GA ++ + D  MQVTVA+NHFGKGL+QRMPR RWGF HVVNNDY
Sbjct: 305 TISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNNDY 364

Query: 366 THWLMYAIGGSMHPTIISQGNRFIAPPN-PAAKQITNRNYATESVWKTWTWRSEGDLMMN 425
           THW +YAIGGS  PTI+S GNRFIAPP+ P  +++T R+YA+E  WK W WRS+ D+ MN
Sbjct: 365 THWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASEDEWKHWNWRSDKDVFMN 424

Query: 426 GAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           GAYF QSGNP  +  ++R  MI+ K G  V +LT+++G+L+C +GR C
Sbjct: 425 GAYFRQSGNPQYKCAHTRQQMIKPKNGLAVSKLTKYAGALDCRVGRRC 472

[Close]

BLAST of Sed0004596 vs. TAIR 10
Match: AT3G01270.1 (Pectate lyase family protein )

HSP 1 Score: 557.0 bits (1434), Expect = 1.4e-158
Identity = 266/475 (56.00%), Postives = 337/475 (70.95%), Query Frame = 0


Query: 2   MAGCRIKVLMVLVSMAVLIPTFRAGIA-EFDDYLVEKEAEAKQDALEAFDSEPMNVTEHL 61
           M   R+  L+ ++ +A LIPT RA +A E D+Y V K  EA++  L A+  +P  + +H 
Sbjct: 1   METARLFKLVCVICIASLIPTIRANVADETDEYWVNKANEARKHTLMAYHPDPYEIVDHF 60

Query: 62  NHQ------------------------VHLLFEGKNNTRRSL------------RKYNGP 121
           + +                        + ++    N+TRRSL             K  GP
Sbjct: 61  HERHYDNSTDVEGTEEEKAVASEEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGP 120

Query: 122 CLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTVTDPSDDNFVDPKPG 181
           C A+NPID+CWRC P+WA  RKKL  CV GFG +TTGG +GR Y VT P DD+ V+P+PG
Sbjct: 121 CTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPG 180

Query: 182 TLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIAYGAGISIQYVRNVI 241
           TLRHA IQK PLWI+F   M I+L +EL++TS KTIDARGANVHIAYGAGI++QYV N+I
Sbjct: 181 TLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNII 240

Query: 242 IHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLDHLSMSNCQDGLIDA 301
           IHGLH+HH++++SGG+IRDS NH G R  +DGDG+SIFG++N+WLDH+SMS CQDGLIDA
Sbjct: 241 IHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDA 300

Query: 302 IQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLIQRMPRCRWGFF 361
           I GSTAITISNSHFTHHNDVML GA ++   D  MQVTVA+NHFGKGL+QRMPR RWGF 
Sbjct: 301 IMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFV 360

Query: 362 HVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPA-AKQITNRNYATESVWKTWTWRS 421
           HVVNNDYTHW +YAIGGS  PTI+S GNRFIAPP+    +++T R+YA+ES WK W WRS
Sbjct: 361 HVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRS 420

Query: 422 EGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSLNCYIGRPC 439
           E D+ MN AYF QSGNP  +  +SR  MI+ K G  V +LT+++G+L+C +G+ C
Sbjct: 421 EKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC 475

[Close]

BLAST of Sed0004596 vs. TAIR 10
Match: AT1G14420.1 (Pectate lyase family protein )

HSP 1 Score: 544.3 bits (1401), Expect = 9.1e-155
Identity = 255/440 (57.95%), Postives = 321/440 (72.95%), Query Frame = 0


Query: 16  MAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQVHLLF---EGKN 75
           +A++ P  R  +A FD Y  +++++A +  + ++D  P+NVT H N+ V++     E +N
Sbjct: 20  LAIVAPQVRGNVAVFDSYWTQRQSDALKQTIGSYDPHPLNVTNHFNYHVNIAVDASESRN 79

Query: 76  NTRRSL---------RKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGL 135
           +TRR L          K +G CLA NPID CWRCD NWANNRKKLA CVLGFGR+TTGG 
Sbjct: 80  DTRRELTQVRSGRKTHKSSGKCLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGK 139

Query: 136 KGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDAR 195
            G  Y V D SD++ ++PKPGTLRHA  +  PLWIIF RSMIIKLQ+EL++TS KTID R
Sbjct: 140 DGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGR 199

Query: 196 GANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFG 255
           GA V+I  GAG+++Q+V NVIIH +++ H++  +GG+IRDS  H+GLRT SDGDG+S+FG
Sbjct: 200 GARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFG 259

Query: 256 SSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTV 315
           ++N+W+DH+SM+ C DG+IDAI GSTA+TISNSHFT H +VMLFGA D +  D  MQ+TV
Sbjct: 260 ATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGARDEHVIDKKMQITV 319

Query: 316 AFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPAAK 375
           AFNHFGK L QRMPRCR+G  HVVNNDYTHW MYAIGG+M+PTIISQGNRFIAPPN  AK
Sbjct: 320 AFNHFGKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAK 379

Query: 376 QITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSG-----NPSKRRPYSRFDMIRAKPGT 435
           QIT R Y     WK+W W+SEGD  +NGAYFVQSG     +   + P      IR KPGT
Sbjct: 380 QITKREYTPYGEWKSWNWQSEGDYFLNGAYFVQSGKANAWSSKPKTPLPNKFTIRPKPGT 439

Query: 436 FVRRLTRFSGSLNCYIGRPC 439
            VR+LT  +G L C +G  C
Sbjct: 440 MVRKLTMDAGVLGCKLGEAC 459

[Close]

BLAST of Sed0004596 vs. TAIR 10
Match: AT2G02720.1 (Pectate lyase family protein )

HSP 1 Score: 519.6 bits (1337), Expect = 2.4e-147
Identity = 252/446 (56.50%), Postives = 323/446 (72.42%), Query Frame = 0


Query: 10  LMVLVSMAVLIPTFRAGIAEFDDYLVEKEAEAKQDALEAFDSEPMNVTEHLNHQVHLLFE 69
           + V +S+ V++P+ +A IAE+D+Y  +++  A ++ LE++D  P NVT+H N+   L  E
Sbjct: 10  VFVALSLTVVVPSVQAHIAEYDEYWTQRQTNALRETLESYDPNPENVTDHFNYHAALAME 69

Query: 70  GK---NNTRRSLR---------KYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGR 129
                N TRR LR         +  G   + N ID+CWR D NW  NRKKLA CVLGFGR
Sbjct: 70  TTGIVNETRRDLRQVGRGKKTTRRGGRFESLNAIDKCWRGDKNWDKNRKKLADCVLGFGR 129

Query: 130 KTTGGLKGRFYTVTDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSH 189
           KTTGG  G  Y VTDPSD++ + PKPGT+RHA  + RPLWIIF RSMIIKLQ+EL++T+ 
Sbjct: 130 KTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITND 189

Query: 190 KTIDARGANVHIAYGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGD 249
           KTID RGA ++I  GAG+++Q+VRNVIIH +HI  + + +GG+I DS  H GLRTVSDGD
Sbjct: 190 KTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGD 249

Query: 250 GVSIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDS 309
           G++IFG++NVW+DH+SM++C DG+IDAI GSTAITISNSHFT H++VMLFG ++    D 
Sbjct: 250 GINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDK 309

Query: 310 IMQVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAP 369
            MQ+TVAFNHFGK L QRMPR R+G  HVVNNDYTHW MYAIGG+M+PTIISQGNRFIAP
Sbjct: 310 KMQITVAFNHFGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAP 369

Query: 370 PNPAAKQITNRNYATESVWKTWTWRSEGDLMMNGAYFVQSG-----NPSKRRPYSRFDMI 429
           P   +KQ+T R Y     WK+W W+SE D  +NGAYFVQSG     + + + P  R   I
Sbjct: 370 PIEDSKQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAI 429

Query: 430 RAKPGTFVRRLTRFSGSLNCYIGRPC 439
           R +PGT VRRLT+ +G+L C  G+ C
Sbjct: 430 RPQPGTKVRRLTKDAGTLGCKPGKSC 455

[Close]

BLAST of Sed0004596 vs. TAIR 10
Match: AT1G04680.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 477.6 bits (1228), Expect = 1.0e-134
Identity = 226/368 (61.41%), Postives = 268/368 (72.83%), Query Frame = 0


Query: 71  KNNTRRSLRKYNGPCLATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTTGGLKGRFYTV 130
           +N+T R    Y   C   NPID CWRCDPNW  NRK+LA C +GFGR   GG  GRFY V
Sbjct: 64  RNHTERRKLGY-FTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVV 123

Query: 131 TDPSDDNFVDPKPGTLRHACIQKRPLWIIFGRSMIIKLQKELLVTSHKTIDARGANVHIA 190
           TDP DDN V+P+PGTLRHA IQ RPLWI+F R M+I+L++EL+V S KTID RGANVHIA
Sbjct: 124 TDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIA 183

Query: 191 YGAGISIQYVRNVIIHGLHIHHVIQASGGMIRDSFNHVGLRTVSDGDGVSIFGSSNVWLD 250
            G  I+IQ+V NVI+HGLHIH        M+R S  H G RT++DGD +SIFGSS+VW+D
Sbjct: 184 NGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWID 243

Query: 251 HLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGK 310
           H S+S+C DGL+DA+ GSTAITISN+H THHN+VML G SDSY  D  MQVT+A+NHFG 
Sbjct: 244 HNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGV 303

Query: 311 GLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFIAPPNPAAKQITNRNY 370
           GLIQRMPRCR G+FHVVNNDYTHW MYAIGGS +PTI SQGNR+ AP NP AK++T R  
Sbjct: 304 GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVD 363

Query: 371 ATESVWKTWTWRSEGDLMMNGAYFVQSGNPSKRRPYSRFDMIRAKPGTFVRRLTRFSGSL 430
              S WK W WRSEGDL+ NGAYF  SG  +    Y+R   + AK  + V  +T  +G+L
Sbjct: 364 TPASHWKGWNWRSEGDLLQNGAYFTSSG-AAASGSYARASSLSAKSSSLVGHITSDAGAL 423

Query: 431 NCYIGRPC 439
            C  GR C
Sbjct: 424 PCRRGRQC 429

The following BLAST results are available for this feature:

BLAST of Sed0004596 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147462.2	1.4e-229	85.26	probable pectate lyase 7 [Cucumis sativus] >KGN59593.1 hypothetical protein Csa_...	[more]
XP_038905811.1	3.1e-229	85.71	pectate lyase-like [Benincasa hispida]	[more]
XP_008443432.1	6.9e-229	85.49	PREDICTED: probable pectate lyase 19 [Cucumis melo]	[more]
XP_022928644.1	9.9e-228	85.19	pectate lyase-like [Cucurbita moschata]	[more]
XP_023531678.1	1.3e-227	85.19	pectate lyase-like [Cucurbita pepo subsp. pepo] >XP_023531679.1 pectate lyase-li...	[more]

BLAST of Sed0004596 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFP5	4.6e-159	57.05	Probable pectate lyase 19 OS=Arabidopsis thaliana OX=3702 GN=At5g15110 PE=2 SV=1	[more]
P40973	7.8e-159	63.61	Pectate lyase OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q9SRH4	1.9e-157	56.00	Probable pectate lyase 7 OS=Arabidopsis thaliana OX=3702 GN=At3g01270 PE=2 SV=1	[more]
P15722	5.6e-157	58.89	Probable pectate lyase P59 OS=Solanum lycopersicum OX=4081 GN=LAT59 PE=2 SV=1	[more]
Q9M9S2	1.3e-153	57.95	Probable pectate lyase 3 OS=Arabidopsis thaliana OX=3702 GN=AT59 PE=2 SV=1	[more]

BLAST of Sed0004596 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCU3	6.7e-230	85.26	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_3G827350 PE=3 SV=1	[more]
A0A1S3B8R7	3.3e-229	85.49	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103487022 PE=3 SV=1	[more]
A0A6J1ELF8	4.8e-228	85.19	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111435488 PE=3 SV=1	[more]
A0A6J1I070	1.4e-227	84.97	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111469675 PE=3 SV=1	[more]
A0A6J1J8N7	5.3e-227	84.81	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111482295 PE=3 SV=1	[more]

BLAST of Sed0004596 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15110.1	4.2e-160	56.84	Pectate lyase family protein	[more]
AT3G01270.1	1.4e-158	56.00	Pectate lyase family protein	[more]
AT1G14420.1	9.1e-155	57.95	Pectate lyase family protein	[more]
AT2G02720.1	2.4e-147	56.50	Pectate lyase family protein	[more]
AT1G04680.1	1.0e-134	61.41	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 111..128 score: 55.29 coord: 337..356 score: 80.24 coord: 409..432 score: 42.26 coord: 235..256 score: 57.14 coord: 379..403 score: 53.71 coord: 135..160 score: 64.84 coord: 315..334 score: 78.1 coord: 171..187 score: 65.55
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 163..360 e-value: 1.7E-95 score: 333.2
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 173..354 e-value: 9.4E-18 score: 64.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 88..431 e-value: 9.1E-114 score: 382.0
IPR007524	Pectate lyase, N-terminal	PFAM	PF04431	Pec_lyase_N	coord: 27..78 e-value: 1.9E-15 score: 56.8
None	No IPR available	PANTHER	PTHR31683:SF146	PECTATE LYASE	coord: 7..438
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 7..438
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 89..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004596.1	Sed0004596.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity