
Sed0004543 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGCTACTCTTTCAAATCTCTCTCGTTTTCTGGCTACTTAACTTCAAAAGATAGGCAGCCAGTTACGACAGTATCCGAGGAGAAGATCAAAACGCGAGACCGAGGATCCGAGGTTTCGGTTATACCGAAGCCGAAGCGGAAACAGTCCCAAGTTTGTTGTAGGGGGGGAGTTGGTAATATTGATGGAGAGAGATGGTTGGTTGTGAGAAACCACAGTATCAGAAGAGATGGTCGAAGGATAAGGGATGGGGAAGAAGAAGAACCGTCCCGGTCTGGGTGGAGTGTTCTCCGGTCCTTTGTTTCGCCGTGTAGGCAGTGCCGAGCTAGCAAGCCTGCTGTTATTGAACCGCGTTCGGTTCAAATGCCTTCATATTCTTGA ATGAGCAGCTACTCTTTCAAATCTCTCTCGTTTTCTGGCTACTTAACTTCAAAAGATAGGCAGCCAGTTACGACAGTATCCGAGGAGAAGATCAAAACGCGAGACCGAGGATCCGAGGTTTCGGTTATACCGAAGCCGAAGCGGAAACAGTCCCAAGTTTGTTGTAGGGGGGGAGTTGGTAATATTGATGGAGAGAGATGGTTGGTTGTGAGAAACCACAGTATCAGAAGAGATGGTCGAAGGATAAGGGATGGGGAAGAAGAAGAACCGTCCCGGTCTGGGTGGAGTGTTCTCCGGTCCTTTGTTTCGCCGTGTAGGCAGTGCCGAGCTAGCAAGCCTGCTGTTATTGAACCGCGTTCGGTTCAAATGCCTTCATATTCTTGA ATGAGCAGCTACTCTTTCAAATCTCTCTCGTTTTCTGGCTACTTAACTTCAAAAGATAGGCAGCCAGTTACGACAGTATCCGAGGAGAAGATCAAAACGCGAGACCGAGGATCCGAGGTTTCGGTTATACCGAAGCCGAAGCGGAAACAGTCCCAAGTTTGTTGTAGGGGGGGAGTTGGTAATATTGATGGAGAGAGATGGTTGGTTGTGAGAAACCACAGTATCAGAAGAGATGGTCGAAGGATAAGGGATGGGGAAGAAGAAGAACCGTCCCGGTCTGGGTGGAGTGTTCTCCGGTCCTTTGTTTCGCCGTGTAGGCAGTGCCGAGCTAGCAAGCCTGCTGTTATTGAACCGCGTTCGGTTCAAATGCCTTCATATTCTTGA MSSYSFKSLSFSGYLTSKDRQPVTTVSEEKIKTRDRGSEVSVIPKPKRKQSQVCCRGGVGNIDGERWLVVRNHSIRRDGRRIRDGEEEEPSRSGWSVLRSFVSPCRQCRASKPAVIEPRSVQMPSYS Homology
BLAST of Sed0004543 vs. NCBI nr
Match: KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.4 bits (285), Expect = 7.3e-22 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 0
BLAST of Sed0004543 vs. NCBI nr
Match: XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia]) HSP 1 Score: 105.1 bits (261), Expect = 4.4e-19 Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of Sed0004543 vs. NCBI nr
Match: KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 4.7e-13 Identity = 55/120 (45.83%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of Sed0004543 vs. NCBI nr
Match: KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus]) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of Sed0004543 vs. ExPASy TrEMBL
Match: A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of Sed0004543 vs. ExPASy TrEMBL
Match: A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13 Identity = 55/120 (45.83%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of Sed0004543 vs. ExPASy TrEMBL
Match: A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.3e-12 Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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