Sed0004536 (gene) Chayote v1

Overview


Name	Sed0004536
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	LG07: 42717022 .. 42718209 (-)
RNA-Seq Expression	Sed0004536
Synteny	Sed0004536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAATCATCCAAAACAGTTCCATATAAACTAATTAGCAAAGATATCACCTTTCATTTTCCTCTTTGATTCAGAGGATTCTCATTCAGCCTTGCTCACAATCAGATGCCTCCCCTATTATCTCGCCCGCTACCGCCTCCGCCTCCCCCTTTCGTAGCCCCTTCGGAAAGTTCATCGTCCCACGGGGCTACTACTCTACCGACAACCATTCCACGGTCCCCCGCCTCAGCATCATTCCCTGCTACACCTTCAAGACAGACAGAACTGACTCCTGTGGAGCAGACAGTTATACAAACTCGAGGTACGAAACCGCAAACTCCATTGCTGAATCCTAACCACTTAGATTCCAGCAAGTCCAGAAAATCGCAGTTACTACAACAAGCTCGGCCACGCCAAACGAATCCAGCTACATGGTGTTTTGCATTCCTGTGTCTACTCTTTAGTCTTCTGCTCATCTTCATGGGAATTGCAACTTTAATTGTTTTCTTGGTTGTTAGACCAAGAAATCCCGTGTTCGACATATCGAATGCGAGCCTCAGCACCGTCTACTTCGATGCACCCGAATATCTCAATGGAGACTTCACTGTTCTCGCAAACTTCACCAACCCAAATCGCGGAGTCGATGTAAGGTACGAGAATGCGGAAATCGAGCTGTTTTTTGGGGATAGGCTCATAGCAACTCAAGCAATTCAGCCCTTCAGTCAAAGAAAGAGAGAAGTGAGGTTACAAGCTGTTCATTTGATATCTAGTCTGGTTTACTTGCCACAAAATTCCGGGTTCGTGCTTCGACAACAGGTACAGAACAACAAAGTTACCTATAACATCAGGGGAACATTCAGAGTTAAAGCTTCACTTGGTATCTTTCATTACTCCTACTGGTTGCATAGCCGGTGCCAGTTGGTGATGACGAGTCCACCAACTGGCCTCTTAGTTGCTCGGAATTGCAAGACTAAGAGGTGAAGAATCACAAATATATTTTATAAATTGTGTACCTTCTATGATATATTTGTATGGATTATTGCTCTGAAGTTCAACAATATTCTTTTTCTTGTTTTTTTGACCTGGTTTACACCATGTTTGGATTCTACATTTATCTAGGAACCAATATATTTGTTATTTTCTTTTATTACTTTAGAGTTTTCAGGCCAGCTTATTGCTAGAGAACATTGTCTAATTCTTCCATATTTG

mRNA sequence

CTTGAATCATCCAAAACAGTTCCATATAAACTAATTAGCAAAGATATCACCTTTCATTTTCCTCTTTGATTCAGAGGATTCTCATTCAGCCTTGCTCACAATCAGATGCCTCCCCTATTATCTCGCCCGCTACCGCCTCCGCCTCCCCCTTTCGTAGCCCCTTCGGAAAGTTCATCGTCCCACGGGGCTACTACTCTACCGACAACCATTCCACGGTCCCCCGCCTCAGCATCATTCCCTGCTACACCTTCAAGACAGACAGAACTGACTCCTGTGGAGCAGACAGTTATACAAACTCGAGGTACGAAACCGCAAACTCCATTGCTGAATCCTAACCACTTAGATTCCAGCAAGTCCAGAAAATCGCAGTTACTACAACAAGCTCGGCCACGCCAAACGAATCCAGCTACATGGTGTTTTGCATTCCTGTGTCTACTCTTTAGTCTTCTGCTCATCTTCATGGGAATTGCAACTTTAATTGTTTTCTTGGTTGTTAGACCAAGAAATCCCGTGTTCGACATATCGAATGCGAGCCTCAGCACCGTCTACTTCGATGCACCCGAATATCTCAATGGAGACTTCACTGTTCTCGCAAACTTCACCAACCCAAATCGCGGAGTCGATGTAAGGTACGAGAATGCGGAAATCGAGCTGTTTTTTGGGGATAGGCTCATAGCAACTCAAGCAATTCAGCCCTTCAGTCAAAGAAAGAGAGAAGTGAGGTTACAAGCTGTTCATTTGATATCTAGTCTGGTTTACTTGCCACAAAATTCCGGGTTCGTGCTTCGACAACAGGTACAGAACAACAAAGTTACCTATAACATCAGGGGAACATTCAGAGTTAAAGCTTCACTTGGTATCTTTCATTACTCCTACTGGTTGCATAGCCGGTGCCAGTTGGTGATGACGAGTCCACCAACTGGCCTCTTAGTTGCTCGGAATTGCAAGACTAAGAGGTGAAGAATCACAAATATATTTTATAAATTGTGTACCTTCTATGATATATTTGTATGGATTATTGCTCTGAAGTTCAACAATATTCTTTTTCTTGTTTTTTTGACCTGGTTTACACCATGTTTGGATTCTACATTTATCTAGGAACCAATATATTTGTTATTTTCTTTTATTACTTTAGAGTTTTCAGGCCAGCTTATTGCTAGAGAACATTGTCTAATTCTTCCATATTTG

Coding sequence (CDS)

ATGCCTCCCCTATTATCTCGCCCGCTACCGCCTCCGCCTCCCCCTTTCGTAGCCCCTTCGGAAAGTTCATCGTCCCACGGGGCTACTACTCTACCGACAACCATTCCACGGTCCCCCGCCTCAGCATCATTCCCTGCTACACCTTCAAGACAGACAGAACTGACTCCTGTGGAGCAGACAGTTATACAAACTCGAGGTACGAAACCGCAAACTCCATTGCTGAATCCTAACCACTTAGATTCCAGCAAGTCCAGAAAATCGCAGTTACTACAACAAGCTCGGCCACGCCAAACGAATCCAGCTACATGGTGTTTTGCATTCCTGTGTCTACTCTTTAGTCTTCTGCTCATCTTCATGGGAATTGCAACTTTAATTGTTTTCTTGGTTGTTAGACCAAGAAATCCCGTGTTCGACATATCGAATGCGAGCCTCAGCACCGTCTACTTCGATGCACCCGAATATCTCAATGGAGACTTCACTGTTCTCGCAAACTTCACCAACCCAAATCGCGGAGTCGATGTAAGGTACGAGAATGCGGAAATCGAGCTGTTTTTTGGGGATAGGCTCATAGCAACTCAAGCAATTCAGCCCTTCAGTCAAAGAAAGAGAGAAGTGAGGTTACAAGCTGTTCATTTGATATCTAGTCTGGTTTACTTGCCACAAAATTCCGGGTTCGTGCTTCGACAACAGGTACAGAACAACAAAGTTACCTATAACATCAGGGGAACATTCAGAGTTAAAGCTTCACTTGGTATCTTTCATTACTCCTACTGGTTGCATAGCCGGTGCCAGTTGGTGATGACGAGTCCACCAACTGGCCTCTTAGTTGCTCGGAATTGCAAGACTAAGAGGTGA

Protein sequence

MPPLLSRPLPPPPPPFVAPSESSSSHGATTLPTTIPRSPASASFPATPSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR

Homology

[Close]

BLAST of Sed0004536 vs. NCBI nr
Match: XP_022981569.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-120
Identity = 234/294 (79.59%), Postives = 254/294 (86.39%), Query Frame = 0


Query: 1   MPPLLSRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PATPSR 60
           MPPL   PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+PSR
Sbjct: 1   MPPLSPPPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAADTQASAALIPAASPSR 60

Query: 61  QTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCL 120
           Q +LTP+EQ VIQ + T+PQTPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA LCL
Sbjct: 61  QADLTPLEQIVIQNQATRPQTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAILCL 120

Query: 121 LFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNR 180
           +FSLLLIF+GIATLI+FLVV+PRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTNPN 
Sbjct: 121 IFSLLLIFLGIATLIIFLVVKPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTNPNH 180

Query: 181 GVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQ 240
            +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+LR+Q
Sbjct: 181 RIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFILRRQ 240

Query: 241 VQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           VQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+CKTKR
Sbjct: 241 VQNNKVIYNIRGTFRVRASLGAVHYSYWLHSRCQLVMTSPPTGVLVARSCKTKR 293

[Close]

BLAST of Sed0004536 vs. NCBI nr
Match: XP_022941198.1 (uncharacterized protein LOC111446574 [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 6.4e-119
Identity = 234/297 (78.79%), Postives = 253/297 (85.19%), Query Frame = 0


Query: 1   MPPLL---SRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PAT 60
           MPPL    S PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+
Sbjct: 1   MPPLSPPPSPPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAAVTQASAALIPAAS 60

Query: 61  PSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAF 120
           PSRQ +LTP+EQ VIQ + T+P TPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA 
Sbjct: 61  PSRQADLTPLEQIVIQDQATRPHTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAI 120

Query: 121 LCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTN 180
           LCL+FSLLLIF+GIATLI+FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTN
Sbjct: 121 LCLIFSLLLIFLGIATLIIFLVVRPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTN 180

Query: 181 PNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVL 240
           PN  +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+L
Sbjct: 181 PNHRIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFIL 240

Query: 241 RQQVQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           R+QVQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+C TKR
Sbjct: 241 RRQVQNNKVIYNIRGTFRVRASLGAIHYSYWLHSRCQLVMTSPPTGVLVARSCNTKR 296

[Close]

BLAST of Sed0004536 vs. NCBI nr
Match: KAG6607728.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-118
Identity = 233/297 (78.45%), Postives = 253/297 (85.19%), Query Frame = 0


Query: 1   MPPLL---SRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PAT 60
           MPPL    S PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+
Sbjct: 1   MPPLSPPPSPPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAAVTQASDALIPAAS 60

Query: 61  PSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAF 120
           PSRQ +LTP+EQ VIQ + T+P TPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA 
Sbjct: 61  PSRQADLTPLEQIVIQDQATRPHTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAI 120

Query: 121 LCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTN 180
           LCL+FSLLLIF+GIATLI+FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTN
Sbjct: 121 LCLIFSLLLIFLGIATLIIFLVVRPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTN 180

Query: 181 PNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVL 240
           PN  +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+L
Sbjct: 181 PNHRIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFIL 240

Query: 241 RQQVQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           R+QVQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+C T+R
Sbjct: 241 RRQVQNNKVIYNIRGTFRVRASLGAIHYSYWLHSRCQLVMTSPPTGVLVARSCNTRR 296

[Close]

BLAST of Sed0004536 vs. NCBI nr
Match: KAG7037303.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434.9 bits (1117), Expect = 5.4e-118
Identity = 230/293 (78.50%), Postives = 250/293 (85.32%), Query Frame = 0


Query: 2   PPLLSRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PATPSRQ 61
           PP    PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+PSRQ
Sbjct: 7   PPSPPLPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAAVTQASAALIPAASPSRQ 66

Query: 62  TELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLL 121
            +LTP+EQ VIQ + T+P TPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA LCL+
Sbjct: 67  ADLTPLEQIVIQDQATRPHTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAILCLI 126

Query: 122 FSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRG 181
           FSLLLIF+GIATLI+FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTNPN  
Sbjct: 127 FSLLLIFLGIATLIIFLVVRPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTNPNHR 186

Query: 182 VDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQV 241
           +DVR+ENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+LR+QV
Sbjct: 187 IDVRFENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFILRRQV 246

Query: 242 QNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           QNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+C TKR
Sbjct: 247 QNNKVIYNIRGTFRVRASLGAIHYSYWLHSRCQLVMTSPPTGVLVARSCNTKR 298

[Close]

BLAST of Sed0004536 vs. NCBI nr
Match: XP_023523222.1 (uncharacterized protein LOC111787482 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.1 bits (1115), Expect = 9.2e-118
Identity = 233/298 (78.19%), Postives = 252/298 (84.56%), Query Frame = 0


Query: 1   MPPLLSRP----LPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PA 60
           MPPL   P    LPPPPP P V  SESS SH A  LPTTIP SPASA+           A
Sbjct: 1   MPPLSPPPSPPLLPPPPPSPLVPLSESSPSHEAAALPTTIP-SPASAAVTQASAALIPAA 60

Query: 61  TPSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFA 120
           +PSRQ +LTP+EQ VIQ + T+P TPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA
Sbjct: 61  SPSRQADLTPLEQIVIQDQATRPHTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFA 120

Query: 121 FLCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFT 180
            LCL+FSLLLIF+GIATLI+FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFTVLANFT
Sbjct: 121 ILCLIFSLLLIFLGIATLIIFLVVRPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFT 180

Query: 181 NPNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFV 240
           NPN  +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+
Sbjct: 181 NPNHRIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFI 240

Query: 241 LRQQVQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           LR+QVQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+C TKR
Sbjct: 241 LRRQVQNNKVIYNIRGTFRVRASLGAIHYSYWLHSRCQLVMTSPPTGVLVARSCNTKR 297

[Close]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.6e-09
Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 75  NPNHLDSSKSRKSQLLQQARPR-QTNPATWCFAFLCLLFSLLL--IFMGIATLIVFLVVR 134
           NP H   ++  + QL  Q++PR Q  P       LC++ +L+L  + +G+A LI +L +R
Sbjct: 5   NPAH-QPARRTQPQLQPQSQPRAQPLPGRRMNPVLCIIVALVLLGLLVGLAILITYLTLR 64

Query: 135 PRNPVFDISNASLSTVYF-DAPEYLNGDFTVLANFTNPNRGVDVRYENAEIELFFGDRLI 194
           P+  ++ +  AS+      +  +++N  F+ +    NP + V VRY +  I     ++ +
Sbjct: 65  PKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSV 124

Query: 195 ATQAIQPFSQR-KREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIRGTFRVKAS 254
           A + I PF QR K E R++   L+S  V L + +   LR +     +   +  T RV   
Sbjct: 125 AHKNISPFKQRPKNETRIE-TQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYK 184

[Close]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 40/145 (27.59%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 108 LCLLFSLLL---IFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLAN 167
           L ++F++L+   + +GIA LI++L+ RP    F +++A L+    D    L  +  +   
Sbjct: 45  LSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFT 104

Query: 168 FTNPNRGVDVRYENAEIELFFGD-RLIATQAIQPFSQRKREVRLQAVHLI-SSLVYLPQN 227
             NPNR + V Y+  E+  ++GD R   +  I  F Q  +   +    L+   LV L   
Sbjct: 105 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 164

Query: 228 SGFVLRQQVQNNKVTYNIRGTFRVK 248
               L + V  N   Y I    R+K
Sbjct: 165 ERKDLNEDV--NSQIYRIDAKLRLK 187

[Close]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 109 CLLFSL-------LLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPE-YLNGDFT 168
           C L SL       L++ +G+A LI +L+VRPR   F +++ASL+     +P+  L  +  
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 169 VLANFTNPNRGVDVRYENAEIELFFGDRLIATQAIQPFSQ-RKREVRLQAVHLISSLVYL 228
           +     NPN+ + + Y+  E   ++  +  +T  + PF Q  K    L       +LV  
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIF 154

Query: 229 PQNSGFVLRQQVQNNKVTYNIRGTFRVK 248
             N+G       +     YNI   FR++
Sbjct: 155 --NAGQSRTLNAERISGVYNIEIKFRLR 180

[Close]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-04
Identity = 24/95 (25.26%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 106 AFLCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANF 165
           + +C +   + + +G+A LI++L+ RP    F +++A+L+   FD    L+    +    
Sbjct: 53  SLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTI 112

Query: 166 TNPNRGVDVRYENAEIELFFGDRLIATQAIQPFSQ 201
            NPN+ V V Y+   +  ++GD+   +  +  F Q
Sbjct: 113 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQ 147

[Close]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.1e-04
Identity = 50/213 (23.47%), Postives = 92/213 (43.19%), Query Frame = 0


Query: 40  ASASFPATPSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTN 99
           +S  FP  P+      P    VIQ    K Q   + P     +  R  QL ++   R   
Sbjct: 22  SSGEFPKKPA-----PPPSTYVIQV--PKDQIYRIPP---PENAHRFEQLSRKKTNRSNC 81

Query: 100 PATWCFAFLCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDF 159
              +C +FL  +F +L++  GI+  +++L+ RP  P + I   S+S +  ++   ++  F
Sbjct: 82  RCCFC-SFLAAVF-ILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSF 141

Query: 160 TVLANFTNPNRGVDVRYE-NAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVY 219
            V     N N  + V YE  + +++++ D  I+   +  F Q  + V +  + L  S + 
Sbjct: 142 NVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQ 201

Query: 220 LPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLG 252
           L       +R +V    V + ++    VK   G
Sbjct: 202 LTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFG 222

[Close]

BLAST of Sed0004536 vs. ExPASy TrEMBL
Match: A0A6J1J284 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111480648 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 7.4e-121
Identity = 234/294 (79.59%), Postives = 254/294 (86.39%), Query Frame = 0


Query: 1   MPPLLSRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PATPSR 60
           MPPL   PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+PSR
Sbjct: 1   MPPLSPPPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAADTQASAALIPAASPSR 60

Query: 61  QTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCL 120
           Q +LTP+EQ VIQ + T+PQTPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA LCL
Sbjct: 61  QADLTPLEQIVIQNQATRPQTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAILCL 120

Query: 121 LFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNR 180
           +FSLLLIF+GIATLI+FLVV+PRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTNPN 
Sbjct: 121 IFSLLLIFLGIATLIIFLVVKPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTNPNH 180

Query: 181 GVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQ 240
            +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+LR+Q
Sbjct: 181 RIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFILRRQ 240

Query: 241 VQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           VQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+CKTKR
Sbjct: 241 VQNNKVIYNIRGTFRVRASLGAVHYSYWLHSRCQLVMTSPPTGVLVARSCKTKR 293

[Close]

BLAST of Sed0004536 vs. ExPASy TrEMBL
Match: A0A6J1FRG3 (uncharacterized protein LOC111446574 OS=Cucurbita moschata OX=3662 GN=LOC111446574 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.1e-119
Identity = 234/297 (78.79%), Postives = 253/297 (85.19%), Query Frame = 0


Query: 1   MPPLL---SRPLPPPPP-PFVAPSESSSSHGATTLPTTIPRSPASASF---------PAT 60
           MPPL    S PLPPPPP P V PS SS SH A  LPTTIP SPASA+           A+
Sbjct: 1   MPPLSPPPSPPLPPPPPSPLVPPSASSPSHEAAALPTTIP-SPASAAVTQASAALIPAAS 60

Query: 61  PSRQTELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAF 120
           PSRQ +LTP+EQ VIQ + T+P TPLLNPN +DSS  RKSQLLQQARPRQTNP  WCFA 
Sbjct: 61  PSRQADLTPLEQIVIQDQATRPHTPLLNPNTIDSSNYRKSQLLQQARPRQTNPIIWCFAI 120

Query: 121 LCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTN 180
           LCL+FSLLLIF+GIATLI+FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFTVLANFTN
Sbjct: 121 LCLIFSLLLIFLGIATLIIFLVVRPRNPMFDIPNASLSTIYFDAPEYLNGDFTVLANFTN 180

Query: 181 PNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVL 240
           PN  +DVRYENA+IELFFGDRLIATQAIQPFSQRKREVRLQ VHLISSLVYLPQNSGF+L
Sbjct: 181 PNHRIDVRYENADIELFFGDRLIATQAIQPFSQRKREVRLQPVHLISSLVYLPQNSGFIL 240

Query: 241 RQQVQNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           R+QVQNNKV YNIRGTFRV+ASLG  HYSYWLHSRCQLVMTSPPTG+LVAR+C TKR
Sbjct: 241 RRQVQNNKVIYNIRGTFRVRASLGAIHYSYWLHSRCQLVMTSPPTGVLVARSCNTKR 296

[Close]

BLAST of Sed0004536 vs. ExPASy TrEMBL
Match: A0A1S3BHM7 (uncharacterized protein LOC103490177 OS=Cucumis melo OX=3656 GN=LOC103490177 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.2e-112
Identity = 221/293 (75.43%), Postives = 244/293 (83.28%), Query Frame = 0


Query: 1   MPPLLSRPLPPP--PPPFVAPSESSSSHGATTLPTTIPRSPASASFP-------ATPSRQ 60
           MP L   P PPP  PP  +AP ESS S GA +LPT  P SPASA+         A+ SR+
Sbjct: 1   MPRLYPPPPPPPPSPPTSIAPPESSPSSGA-SLPTARP-SPASAAVAQASTPTHASSSRE 60

Query: 61  TELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLL 120
            EL  ++Q ++Q R TKP TPLLN NH DSSK RK QLLQQARPRQTNP  WCFAFLCL 
Sbjct: 61  AELASLDQIIVQNRATKPHTPLLNTNHTDSSKYRKPQLLQQARPRQTNPIIWCFAFLCLA 120

Query: 121 FSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRG 180
           FSLLLIF+GIATL++FLVVRPRNP+FDI NASLST+YFDAPEYLNGDFT+LANFTNPN  
Sbjct: 121 FSLLLIFLGIATLVIFLVVRPRNPLFDIPNASLSTIYFDAPEYLNGDFTILANFTNPNHR 180

Query: 181 VDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQV 240
           VDVRYENA+IELFFGDRLIATQAIQPFSQRK EVRLQ VHLISSLV+LPQN G VLR+QV
Sbjct: 181 VDVRYENADIELFFGDRLIATQAIQPFSQRKNEVRLQPVHLISSLVFLPQNFGLVLRRQV 240

Query: 241 QNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           QNNK+ YNIRGTFRVKAS+GI HYS+WLHSRCQLVMTSPPTG+LVAR+CKTKR
Sbjct: 241 QNNKIVYNIRGTFRVKASVGIIHYSFWLHSRCQLVMTSPPTGILVARSCKTKR 291

[Close]

BLAST of Sed0004536 vs. ExPASy TrEMBL
Match: A0A6J1CCQ5 (uncharacterized protein LOC111010452 OS=Momordica charantia OX=3673 GN=LOC111010452 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 221/290 (76.21%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 3   PLLSRPLPPPPPPFVAPSESSSSHGATTLPTTIPRSPASAS--------FPATPSRQTEL 62
           PL   PLPPPPPPF APS SS S+ A   P   P SPA A           ATPSRQ EL
Sbjct: 2   PLSPPPLPPPPPPFTAPSASSPSNAAA--PPVAP-SPALAEGARTSPVLTSATPSRQAEL 61

Query: 63  TPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSL 122
           T +EQ VIQ R TKP TPLLNP+H+DSS  RK  +LQQARPRQTNP  WCFA LC+LFS+
Sbjct: 62  TSLEQIVIQNRATKPHTPLLNPSHIDSSNYRK-PILQQARPRQTNPIIWCFASLCMLFSI 121

Query: 123 LLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDV 182
           LLIF GIATLIVFLVVRPRNP+FDI NASLST+YFD+ EYLNGDFTVL NFTNPN  VDV
Sbjct: 122 LLIFFGIATLIVFLVVRPRNPLFDIPNASLSTIYFDSAEYLNGDFTVLTNFTNPNHRVDV 181

Query: 183 RYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNN 242
           RYENA+IELFFGDRLIATQAIQPFSQR++EVRL+ VHLISSLVYLPQNSG VLR+QVQNN
Sbjct: 182 RYENADIELFFGDRLIATQAIQPFSQRRKEVRLEPVHLISSLVYLPQNSGLVLRRQVQNN 241

Query: 243 KVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           KV YNIRGTF+V+ASLGI HYSYWLHSRCQLVMTSPPTG+LVAR+C+TKR
Sbjct: 242 KVIYNIRGTFKVRASLGIIHYSYWLHSRCQLVMTSPPTGVLVARSCRTKR 287

[Close]

BLAST of Sed0004536 vs. ExPASy TrEMBL
Match: A0A0A0K372 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G193750 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.5e-110
Identity = 219/293 (74.74%), Postives = 241/293 (82.25%), Query Frame = 0


Query: 1   MPPLLSRPLPPP--PPPFVAPSESSSSHGATTLPTTIPRSPASASF-------PATPSRQ 60
           MP L   P PPP  PP  +AP  SS S GA  LPTT P SP SA+         A+ SR+
Sbjct: 1   MPRLYPPPPPPPPSPPTSIAPPASSPSSGA-ALPTTRP-SPTSAAVAQASTPTQASSSRE 60

Query: 61  TELTPVEQTVIQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLL 120
            EL  ++Q ++Q R TKP TPLLN NH DSSK RK QLLQQARPRQTNP  WCFAFLCL 
Sbjct: 61  AELASLDQIIVQNRATKPHTPLLNTNHTDSSKYRKPQLLQQARPRQTNPIIWCFAFLCLA 120

Query: 121 FSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRG 180
           FSLLLIF+GIATLI+FLV+RPRNP+FDI NASLST+YFDAPEYLNGDFT+LANFTNPN  
Sbjct: 121 FSLLLIFLGIATLIIFLVIRPRNPLFDIPNASLSTIYFDAPEYLNGDFTILANFTNPNHR 180

Query: 181 VDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQV 240
           VDVRYENA+IELFFGDRLIATQAIQPFSQRK E+RLQ VHL SSLV+LPQN G VLR+QV
Sbjct: 181 VDVRYENADIELFFGDRLIATQAIQPFSQRKNEIRLQPVHLTSSLVFLPQNFGLVLRRQV 240

Query: 241 QNNKVTYNIRGTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           QNNKV YNIRGTFRVKAS+GI HYS+WLHSRCQLVMTSPPTG+LVAR+CKTKR
Sbjct: 241 QNNKVVYNIRGTFRVKASVGIIHYSFWLHSRCQLVMTSPPTGILVARSCKTKR 291

[Close]

BLAST of Sed0004536 vs. TAIR 10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 255.0 bits (650), Expect = 7.2e-68
Identity = 140/273 (51.28%), Postives = 184/273 (67.40%), Query Frame = 0


Query: 12  PPPPFVAPSESSSSHGATTLPTTIPRSPASASFPATPSRQTELTPVEQTVIQTRGTKPQT 71
           PPPP + P E+ S       P+++  +P +   P    + T+ TPV Q V+    TKP T
Sbjct: 8   PPPPQLQPPETPS----WETPSSVWYTPRTT--PWRTPQSTQSTPVGQMVL----TKPAT 67

Query: 72  PLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSLLLIFMGIATLIVFLVVR 131
             +  N LD+   +   +L+Q R  +T+   WC A  C +FSLLLIF  IATLIVFL +R
Sbjct: 68  --VRFNGLDAEPRKDRVILRQPRSSRTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIR 127

Query: 132 PRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDVRYENAEIELFFGDRLIA 191
           PR PVFDI NA+L T+YFD PE+ NGD ++L NFTNPN+ ++V++E   IELFF +RLIA
Sbjct: 128 PRIPVFDIPNANLHTIYFDTPEFFNGDLSMLVNFTNPNKKIEVKFEKLRIELFFFNRLIA 187

Query: 192 TQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLG 251
            Q +QPF Q+K E RL+ + LISSLV LP N    LR+Q++NNK+ Y IRGTF+VKA  G
Sbjct: 188 AQVVQPFLQKKHETRLEPIRLISSLVGLPVNHAVELRRQLENNKIEYEIRGTFKVKAHFG 247

Query: 252 IFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           + HYSY LH RCQL MT PPTG+L++RNC TK+
Sbjct: 248 MIHYSYQLHGRCQLQMTGPPTGILISRNCTTKK 268

[Close]

BLAST of Sed0004536 vs. TAIR 10
Match: AT5G56050.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G26490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 3.2e-60
Identity = 136/283 (48.06%), Postives = 179/283 (63.25%), Query Frame = 0


Query: 2   PPLLSRPLPPPPPPFVAPSESSSSHGATTLPTTIPRSPASASFPATPSRQTELTPVEQTV 61
           PP  S+P PP  PP+  PS    S   T   TT PRS  S     TP   TE+   +  +
Sbjct: 6   PPPQSQPQPPETPPWETPSSKWYSPIYTPWRTT-PRSTQSTP-TTTPIALTEVIVSKSPL 65

Query: 62  IQTRGTKPQTPLLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSLLLIFMGI 121
              +   P TP L  + +++    ++ +L Q R  +TNP  WC A LC +FS+LLI  GI
Sbjct: 66  SNQK--SPATPKL--DSMEAHPLHETMVLLQLRTSRTNPWIWCGAALCFIFSILLIVFGI 125

Query: 122 ATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDVRYENAEI 181
           ATLI++L V+PR PVFDISNA L+T+ F++P Y NGD  +  NFTNPN+ ++VR+EN  +
Sbjct: 126 ATLILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNPNKKLNVRFENLMV 185

Query: 182 ELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIR 241
           EL+F D  IATQ + PFSQR  + RL+ + LIS+LV+LP N    LR+QV +N++ Y IR
Sbjct: 186 ELWFADTKIATQGVLPFSQRNGKTRLEPIRLISNLVFLPVNHILELRRQVTSNRIAYEIR 245

Query: 242 GTFRVKASLGIFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
             FRVKA  G+ HYSY LH  CQL ++SPP G LV RNC TKR
Sbjct: 246 SNFRVKAIFGMIHYSYMLHGICQLQLSSPPAGGLVYRNCTTKR 282

[Close]

BLAST of Sed0004536 vs. TAIR 10
Match: AT3G26350.1 (LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-36
Identity = 97/273 (35.53%), Postives = 135/273 (49.45%), Query Frame = 0


Query: 13  PPPFVAPSESSSSHGATTLPTTIPRSPASASFPATPSRQTELTPVEQTVIQTRGTKPQTP 72
           PPP  AP  +   +G+T  P   P    +A  P+   R              RG +   P
Sbjct: 120 PPPPQAPQRNGGGYGSTLPPIPKPSPWRTAPTPSPHHR--------------RGPRLPPP 179

Query: 73  LLNPNHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSLLLIFMGIATLIVFLVVRP 132
                                  R+TN  TW  AF C +F ++LI  G+  LIV+LV RP
Sbjct: 180 ----------------------SRETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRP 239

Query: 133 RNPVFDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDVRYENAEIELFFGDRLIAT 192
           R+P  DIS A+L+  Y D    LNGD T+LAN TNP++   V +     EL++ + LIAT
Sbjct: 240 RSPYVDISAANLNAAYLDMGFLLNGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIAT 299

Query: 193 QAIQPFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLG- 252
           Q I+PF   K+      VHL+SS V L       L++Q++   V  N+RG F  ++ +G 
Sbjct: 300 QYIEPFKVPKKTSMFANVHLVSSQVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGP 356

Query: 253 IFHYSYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           +F YSY LH+ C + +  PP G + AR C TKR
Sbjct: 360 LFRYSYKLHTHCSVSLNGPPLGAMRARRCNTKR 356

[Close]

BLAST of Sed0004536 vs. TAIR 10
Match: AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-34
Identity = 93/269 (34.57%), Postives = 135/269 (50.19%), Query Frame = 0


Query: 29  TTLPTTIPRSPASASFPATP------------SRQTELTPVEQTVIQTRGTKPQTPLLNP 88
           T  P TI  SP+S   P  P            +R  +L+P EQ           TP    
Sbjct: 58  TEPPETIHESPSSRPLPLRPEEPLPPRHNPNSARPLQLSPEEQRPPHRGYGSEPTPW--- 117

Query: 89  NHLDSSKSRKSQLLQQARPRQTNPATWCFAFLCLLFSLLLIFMGIATLIVFLVVRPRNPV 148
                 +   ++   Q  P++T P T      C +  ++LI  G+  L+V+L  RPR+P 
Sbjct: 118 ------RRAPTRPAYQQGPKRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPY 177

Query: 149 FDISNASLSTVYFDAPEYLNGDFTVLANFTNPNRGVDVRYENAEIELFFGDRLIATQAIQ 208
           FDIS A+L+T   D    LNGD  V+ NFTNP++   V +     EL+F + LIAT+ I+
Sbjct: 178 FDISAATLNTANLDMGYVLNGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIE 237

Query: 209 PFSQRKREVRLQAVHLISSLVYLPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLG-IFHY 268
           PF   K      + HL+SS V +       L+ Q+    V  N+RGTF  +++LG +  Y
Sbjct: 238 PFIVPKGMSMFTSFHLVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRY 297

Query: 269 SYWLHSRCQLVMTSPPTGLLVARNCKTKR 285
           SYWLH++C + + +PP G + AR C TKR
Sbjct: 298 SYWLHTQCSISLNTPPAGTMRARRCNTKR 317

[Close]

BLAST of Sed0004536 vs. TAIR 10
Match: AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-34
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 0


Query: 98  TNPATWCFAFLCLLFSLLLIFMGIATLIVFLVVRPRNPVFDISNASLSTVYFDAPEYLNG 157
           T PAT C    C +  ++LI  G+  L+V+L  RPR+P FDIS A+L+T   D    LNG
Sbjct: 2   TLPATIC----CAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNG 61

Query: 158 DFTVLANFTNPNRGVDVRYENAEIELFFGDRLIATQAIQPFSQRKREVRLQAVHLISSLV 217
           D  V+ NFTNP++   V +     EL+F + LIAT+ I+PF   K      + HL+SS V
Sbjct: 62  DLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSSQV 121

Query: 218 YLPQNSGFVLRQQVQNNKVTYNIRGTFRVKASLG-IFHYSYWLHSRCQLVMTSPPTGLLV 277
            +       L+ Q+    V  N+RGTF  +++LG +  YSYWLH++C + + +PP G + 
Sbjct: 122 QIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGTMR 181

Query: 278 ARNCKTKR 285
           AR C TKR
Sbjct: 182 ARRCNTKR 185

The following BLAST results are available for this feature:

BLAST of Sed0004536 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981569.1	1.5e-120	79.59	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
XP_022941198.1	6.4e-119	78.79	uncharacterized protein LOC111446574 [Cucurbita moschata]	[more]
KAG6607728.1	1.4e-118	78.45	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7037303.1	5.4e-118	78.50	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023523222.1	9.2e-118	78.19	uncharacterized protein LOC111787482 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004536 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	5.6e-09	28.26	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9FNH6	8.4e-05	27.59	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	1.4e-04	27.03	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	4.2e-04	25.26	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9ZVD2	7.1e-04	23.47	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Sed0004536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J284	7.4e-121	79.59	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111480648 PE=4 SV=1	[more]
A0A6J1FRG3	3.1e-119	78.79	uncharacterized protein LOC111446574 OS=Cucurbita moschata OX=3662 GN=LOC1114465...	[more]
A0A1S3BHM7	8.2e-112	75.43	uncharacterized protein LOC103490177 OS=Cucumis melo OX=3656 GN=LOC103490177 PE=...	[more]
A0A6J1CCQ5	1.8e-111	76.21	uncharacterized protein LOC111010452 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0K372	1.5e-110	74.74	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G193750 PE=4 ...	[more]

BLAST of Sed0004536 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26490.1	7.2e-68	51.28	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G56050.1	3.2e-60	48.06	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G26350.1	1.5e-36	35.53	LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED ...	[more]
AT1G13050.1	4.0e-34	34.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13050.2	5.2e-34	40.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 166..262 e-value: 2.6E-8 score: 34.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31852:SF4	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 65..284
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 65..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004536.1	Sed0004536.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane